libbifrost-dev 1.3.1-1 (amd64 binary) in ubuntu noble
Libbifrost-dev is the development library for the command-line tool
bifrost for sequencing that features a broad range of functions, such as
indexing, editing, and querying the graph, and includes a graph coloring
method that maps each k-mer of the graph to the genomes it occurs in.
.
* Build, index, color and query the compacted de Bruijn graph
* No need to build the uncompacted de Bruijn graph
* Reads or assembled genomes as input
* Output graph in GFA (can be visualized with Bandage), FASTA or binary
* Graph cleaning: short tip clipping, etc.
* Multi-threaded
* No parameters to estimate with other tools
* Exact or approximate k-mer search of queries
Details
- Package version:
- 1.3.1-1
- Status:
- Published
- Component:
- universe
- Priority:
- Optional
Downloadable files
amd64 build of bifrost 1.3.1-1 in ubuntu noble PROPOSED produced
these files:
- libbifrost-dev_1.3.1-1_amd64.deb (630.1 KiB)
Package relationships
- Depends on: