mira 4.9.6-7build1 source package in Ubuntu
Changelog
mira (4.9.6-7build1) lunar; urgency=medium * Rebuild against latest icu -- Jeremy Bicha <email address hidden> Sun, 05 Feb 2023 09:51:50 -0500
Upload details
- Uploaded by:
- Jeremy Bícha
- Uploaded to:
- Lunar
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- science
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Lunar | release | universe | science |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| mira_4.9.6.orig.tar.bz2 | 14.3 MiB | e910479bc5f3f205913ac81cd2a24449cc175a6d1ae1fe3ae33ea0e100435b16 |
| mira_4.9.6-7build1.debian.tar.xz | 34.4 KiB | f18d400f569212c2c98cee71a31f843c14fe7e1cc0362dd47f7c1ffa2af2fd95 |
| mira_4.9.6-7build1.dsc | 2.4 KiB | 9947d3b8a09aa77de4e25747c7d04a5caed3696fae2ad286e440573f2b0623a7 |
Available diffs
- diff from 4.9.6-7 (in Debian) to 4.9.6-7build1 (293 bytes)
Binary packages built by this source
- mira-assembler: Whole Genome Shotgun and EST Sequence Assembler
The mira genome fragment assembler is a specialised assembler for
sequencing projects classified as 'hard' due to high number of similar
repeats. For expressed sequence tags (ESTs) transcripts, miraEST is
specialised on reconstructing pristine mRNA transcripts while
detecting and classifying single nucleotide polymorphisms (SNP)
occurring in different variations thereof.
.
The assembler is routinely used for such various tasks as mutation
detection in different cell types, similarity analysis of transcripts
between organisms, and pristine assembly of sequences from various
sources for oligo design in clinical microarray experiments.
.
The package provides the following executables:
Binaries provided:
* mira: for assembly of genome sequences
* miramem: estimating memory needed to assemble projects.
* mirabait: a "grep" like tool to select reads with kmers up to 256 bases.
* miraconvert: is a tool to convert, extract and sometimes recalculate all
kinds of data related to sequence assembly files.
- mira-assembler-dbgsym: debug symbols for mira-assembler
- mira-doc: documentation for the mira assembler
The mira genome fragment assembler is a specialised assembler for
sequencing projects classified as 'hard' due to high number of similar
repeats.
.
This package contains an HTML book introducing to mira.
- mira-rfam-12s-rrna: extract of RFAM 12 rRNA database
The mira genome fragment assembler is a specialised assembler for
sequencing projects classified as 'hard' due to high number of similar
repeats.
.
This package contains data to enable MIRA and MIRABAIT to search for rRNA and
rDNA. This data set contains an excerpt of the RFAM database.
