Problem running process generated locally with mg5

Hi Ezio,

I can see multiple reasons:

1) The job is not yet finished on the cluster but the command qstat
fail to find it.
> qstat: Unknown Job Id 508.teofarm02.to.infn.it

2) The jobs is indeed finished but the log file is not yet written on
the disk (a typical file synchronization problem)

If this is a filesystem problem this should be intermittent. So I
think that this is the first problem.
So few question:
1) Do you see the run with the qstat command?
2) If so could you check the command qstat ID (where ID is the ID of
the job)
3) is the ID the same as the one given in the (new) error
> qstat: Unknown Job Id XXXX.teofarm02.to.infn.it

I hope that with those information, I could be able to provide a patch
working on your Torque installation.

Cheers,

Olivier

On Apr 23, 2012, at 6:55 AM, Ezio Maina wrote:

> New question #194470 on MadGraph5:
> https://answers.launchpad.net/madgraph5/+question/194470
>
> I am trying to run a process generated on my linux box with mg5. I
> am using a Torque queue system.
> I launch generate events and everything works for a while then it
> crasheswhen combining events.
>
> The screen output is the following:
>
>
> No module named madgraph.interface.extended_cmd
> No module named madgraph.various.misc
> ************************************************************
> * *
> * W E L C O M E to M A D G R A P H 5 *
> * M A D E V E N T *
> * *
> * * * *
> * * * * * *
> * * * * * 5 * * * * *
> * * * * * *
> * * * *
> * *
> * VERSION 5.1.4.4 *
> * *
> * The MadGraph Development Team - Please visit us at *
> * https://server06.fynu.ucl.ac.be/projects/madgraph *
> * *
> * Type 'help' for in-line help. *
> * *
> ************************************************************
> load configuration from Cards/me5_configuration.txt
> perl: warning: Setting locale failed.
> perl: warning: Please check that your locale settings:
> LANGUAGE = (unset),
> LC_ALL = (unset),
> LC_CTYPE = "UTF-8",
> LANG = "en_US.UTF-8"
> are supported and installed on your system.
> perl: warning: Falling back to the standard locale ("C").
> Using default text editor "vi". Set another one in ./input/
> mg5_configuration.txt
> Using default eps viewer "gv". Set another one in ./input/
> mg5_configuration.txt
> Using default web browser "firefox". Set another one in ./input/
> mg5_configuration.txt
> generate_events
> Will run in mode parton
> Do you want to edit one cards (press enter to bypass editing)?
> 1 / param : param_card.dat (be carefull about parameter
> consistency, especially widths)
> 2 / run : run_card.dat
> Path to a valid card.
> [0, done, 1, param, 2, run, enter path][20s to answer]
> 0
> Generating 100000 events with run name run_01
> survey run_01
> compile directory
>
> (firefox:18157): Gtk-WARNING **: Locale not supported by C library.
> Using the fallback 'C' locale.
> Running Survey
> Creating Jobs
> Working on SubProcesses
> P0_qq_wpwm
> Idle: 0 Running: 2 Finish: 0
>
> (Gecko:18157): Gdk-WARNING **: locale not supported by C library
> INFO: All jobs finished
> End survey
> refine 100000
> Creating Jobs
> Refine results to 100000
> Using random number seed offset = 41
> P0_qq_wpwm
> Idle: 48 Running: 8 Finish: 0
> Idle: 30 Running: 8 Finish: 18
> Idle: 6 Running: 8 Finish: 42
> INFO: All jobs finished
> Combining runs
> ^[[Afinish refine
> refine 100000
> Creating Jobs
> Refine results to 100000
> Using random number seed offset = 41
> P0_qq_wpwm
> INFO: All jobs finished
> Combining runs
> finish refine
> combine_events
> Combining Events
> qstat: Unknown Job Id 508.teofarm02.to.infn.it
> Command "generate_events " interrupted in sub-command:
> "generate_events" with error:
> IOError : [Errno 2] No such file or directory: '/home/maina/
> MadEvent5/MadGraph5_v1_4_4/jj2wpwm/SubProcesses/combine.log'
> Please report this bug on https://bugs.launchpad.net/madgraph5
> More information is found in '/home/maina/MadEvent5/MadGraph5_v1_4_4/
> jj2wpwm/run_01_tag_1_debug.log'.
> Please attach this file to your report.
> quit
>
>
>
> The log is as follows:
>
>
> #************************************************************
> #* MadGraph/MadEvent 5 *
> #* *
> #* * * *
> #* * * * * *
> #* * * * * 5 * * * * *
> #* * * * * *
> #* * * *
> #* *
> #* *
> #* VERSION 5.1.4.4 *
> #* *
> #* The MadGraph Development Team - Please visit us at *
> #* https://server06.fynu.ucl.ac.be/projects/madgraph *
> #* *
> #************************************************************
> #* *
> #* Command File for MadEvent *
> #* *
> #* run as ./bin/madevent.py filename *
> #* *
> #************************************************************
> generate_events
> Traceback (most recent call last):
> File "/home/maina/MadEvent5/MadGraph5_v1_4_4/jj2wpwm/bin/internal/
> extended_cmd.py", line 548, in onecmd
> return cmd.Cmd.onecmd(self, line)
> File "/usr/local/lib/python2.7/cmd.py", line 221, in onecmd
> return func(arg)
> File "/home/maina/MadEvent5/MadGraph5_v1_4_4/jj2wpwm/bin/internal/
> madevent_interface.py", line 1750, in do_generate_events
> self.exec_cmd('combine_events', postcmd=False)
> File "/home/maina/MadEvent5/MadGraph5_v1_4_4/jj2wpwm/bin/internal/
> extended_cmd.py", line 586, in exec_cmd
> stop = cmd.Cmd.onecmd(current_interface, line)
> File "/usr/local/lib/python2.7/cmd.py", line 221, in onecmd
> return func(arg)
> File "/home/maina/MadEvent5/MadGraph5_v1_4_4/jj2wpwm/bin/internal/
> madevent_interface.py", line 2137, in do_combine_events
> output =
> open(pjoin(self.me_dir,'SubProcesses','combine.log')).read()
> IOError: [Errno 2] No such file or directory: '/home/maina/MadEvent5/
> MadGraph5_v1_4_4/jj2wpwm/SubProcesses/combine.log'
> Value of current Options:
> web_browser : None
> text_editor : None
> pythia-pgs_path :
> td_path :
> delphes_path :
> cluster_type : pbs
> madanalysis_path :
> cluster_queue : batch
> group_subprocesses : Auto
> fortran_compiler : None
> nb_core : 2
> exrootanalysis_path :
> eps_viewer : None
> timeout : 20
> automatic_html_opening : False
> cluster_mode : 1
> pythia8_path :
> ignore_six_quark_processes : False
> run_mode : 1
>
>
>
> Any clue?
> Thanks
>
>
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