Installing on 12.04
Hi,
I am trying to install Esys from the prebuilt package described in FAQ#1792 but I get the following errors towards the end of the installation:
juan@juan-
Reading package lists... Done
Building dependency tree
Reading state information... Done
Suggested packages:
paraview
The following NEW packages will be installed:
esys-
0 upgraded, 2 newly installed, 0 to remove and 15 not upgraded.
Need to get 22.0 MB of archives.
After this operation, 90.9 MB of additional disk space will be used.
Get:1 http://
Get:2 http://
Fetched 22.0 MB in 12min 15s (29.9 kB/s)
Selecting previously unselected package liblsmgengeo.
(Reading database ... 190355 files and directories currently installed.)
Unpacking liblsmgengeo (from .../liblsmgenge
Selecting previously unselected package esys-particle-
Unpacking esys-particle-daily (from .../esys-
Processing triggers for doc-base ...
Processing 2 added doc-base files...
Error in `/usr/share/
Note: `install-docs --verbose --check file_name' may give more details about the above error.
Registering documents with scrollkeeper...
Setting up liblsmgengeo (0.1-0~
Setting up esys-particle-daily (2.2-0~
Processing triggers for libc-bin ...
ldconfig deferred processing now taking place
It doesn't seem like a successful installation to me, am I wrong?
Alternatively I tried following the normal installation instructions but the povray dependency cannot be found. I tried manually installing from the Esys package in the synaptic package manager as one thread suggested (and veryfing the proper repository settings), but it still gave the same error.
Thanks!
Juan
Question information
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- Solved by:
- Juan Cardenas
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#1 |
Disregard the prebuilt package question. I installed POVray manually and got all the way through the installation described on FAQ#1613 but once I get to step 7 and I try the make command I get this huge error:
make all-recursive
make[1]: Entering directory `/ESyS-
Making all in libltdl
make[2]: Entering directory `/ESyS-
make all-am
make[3]: Entering directory `/ESyS-
/bin/bash ./libtool --tag=CC --mode=compile mpic++ -DHAVE_CONFIG_H -I. -DLT_CONFIG_
libtool: compile: mpic++ -DHAVE_CONFIG_H -I. "-DLT_CONFIG_
libtool: compile: mpic++ -DHAVE_CONFIG_H -I. "-DLT_CONFIG_
mv -f .deps/dlopen.Tpo .deps/dlopen.Plo
/bin/bash ./libtool --tag=CC --mode=link mpic++ -g -O2 -module -avoid-version -L/usr/lib -o dlopen.la dlopen.lo
libtool: link: ar cru .libs/dlopen.a .libs/dlopen.o
libtool: link: ranlib .libs/dlopen.a
libtool: link: ( cd ".libs" && rm -f "dlopen.la" && ln -s "../dlopen.la" "dlopen.la" )
/bin/bash ./libtool --tag=CC --mode=compile mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_
libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_
libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_
mv -f .deps/libltdlc_
/bin/bash ./libtool --tag=CC --mode=compile mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_
libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_
libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_
mv -f .deps/libltdlc_
/bin/bash ./libtool --tag=CC --mode=compile mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_
libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_
libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_
mv -f .deps/libltdlc_
/bin/bash ./libtool --tag=CC --mode=compile mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_
libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_
libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_
mv -f .deps/libltdlc_
/bin/bash ./libtool --tag=CC --mode=compile mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_
libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_
libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_
mv -f .deps/libltdlc_
/bin/bash ./libtool --tag=CC --mode=compile mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_
libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_
libtool: compile: mpic++ -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_
mv -f .deps/libltdlc_
/bin/bash ./libtool --tag=CC --mode=compile mpic++ -DHAVE_CONFIG_H -I. -DLT_CONFIG_
libtool: compile: mpic++ -DHAVE_CONFIG_H -I. "-DLT_CONFIG_
libtool: compile: mpic++ -DHAVE_CONFIG_H -I. "-DLT_CONFIG_
mv -f .deps/lt__strl.Tpo .deps/lt__strl.Plo
/bin/bash ./libtool --tag=CC --mode=link mpic++ -g -O2 -no-undefined -dlpreopen dlopen.la -L/usr/lib -o libltdlc.la libltdlc_
libtool: link: rm -f .libs/libltdlc.nm .libs/libltdlc.nmS .libs/libltdlc.nmT
libtool: link: (cd .libs && mpic++ -g -O2 -c -fno-builtin -fno-rtti -fno-exceptions -fPIC -DPIC "libltdlcS.c")
libtool: link: rm -f ".libs/libltdlcS.c" ".libs/libltdlc.nm" ".libs/
libtool: link: (cd .libs/libltdlc.
libtool: link: ar cru .libs/libltdlc.a .libs/libltdlc_
libtool: link: ranlib .libs/libltdlc.a
libtool: link: rm -fr .libs/libltdlc.lax
libtool: link: ( cd ".libs" && rm -f "libltdlc.la" && ln -s "../libltdlc.la" "libltdlc.la" )
make[3]: Leaving directory `/ESyS-
make[2]: Leaving directory `/ESyS-
Making all in Foundation
make[2]: Entering directory `/ESyS-
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. "-I.." -I/usr/include -g -O2 -MT console.lo -MD -MP -MF .deps/console.Tpo -c -o console.lo console.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -g -O2 -MT console.lo -MD -MP -MF .deps/console.Tpo -c console.cpp -fPIC -DPIC -o .libs/console.o
console.cpp: In member function 'BasicCon& BasicCon:
console.cpp:254:17: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
console.cpp: In member function 'BasicCon& BasicCon:
console.cpp:265:17: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
console.cpp: In member function 'BasicCon& BasicCon:
console.cpp:276:17: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
console.cpp: In member function 'BasicCon& BasicCon:
console.cpp:287:17: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
console.cpp: In member function 'BasicCon& BasicCon:
console.cpp:298:17: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
console.cpp: In member function 'BasicCon& BasicCon:
console.cpp:309:17: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
console.cpp: In member function 'BasicCon& BasicCon:
console.cpp:320:17: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
console.cpp: In member function 'BasicCon& BasicCon:
console.cpp:331:17: warning: deprecated conversion from string constant to 'char*' [-Wwrite-strings]
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -g -O2 -MT console.lo -MD -MP -MF .deps/console.Tpo -c console.cpp -o console.o >/dev/null 2>&1
mv -f .deps/console.Tpo .deps/console.Plo
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. "-I.." -I/usr/include -g -O2 -MT Counter.lo -MD -MP -MF .deps/Counter.Tpo -c -o Counter.lo Counter.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -g -O2 -MT Counter.lo -MD -MP -MF .deps/Counter.Tpo -c Counter.cpp -fPIC -DPIC -o .libs/Counter.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -g -O2 -MT Counter.lo -MD -MP -MF .deps/Counter.Tpo -c Counter.cpp -o Counter.o >/dev/null 2>&1
mv -f .deps/Counter.Tpo .deps/Counter.Plo
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. "-I.." -I/usr/include -g -O2 -MT Matrix3.lo -MD -MP -MF .deps/Matrix3.Tpo -c -o Matrix3.lo Matrix3.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -g -O2 -MT Matrix3.lo -MD -MP -MF .deps/Matrix3.Tpo -c Matrix3.cpp -fPIC -DPIC -o .libs/Matrix3.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -g -O2 -MT Matrix3.lo -MD -MP -MF .deps/Matrix3.Tpo -c Matrix3.cpp -o Matrix3.o >/dev/null 2>&1
mv -f .deps/Matrix3.Tpo .deps/Matrix3.Plo
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. "-I.." -I/usr/include -g -O2 -MT Quaternion.lo -MD -MP -MF .deps/Quaternio
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -g -O2 -MT Quaternion.lo -MD -MP -MF .deps/Quaternio
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -g -O2 -MT Quaternion.lo -MD -MP -MF .deps/Quaternio
mv -f .deps/Quaternio
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. "-I.." -I/usr/include -g -O2 -MT vec3.lo -MD -MP -MF .deps/vec3.Tpo -c -o vec3.lo vec3.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -g -O2 -MT vec3.lo -MD -MP -MF .deps/vec3.Tpo -c vec3.cpp -fPIC -DPIC -o .libs/vec3.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -g -O2 -MT vec3.lo -MD -MP -MF .deps/vec3.Tpo -c vec3.cpp -o vec3.o >/dev/null 2>&1
mv -f .deps/vec3.Tpo .deps/vec3.Plo
/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. "-I.." -I/usr/include -g -O2 -MT Timer.lo -MD -MP -MF .deps/Timer.Tpo -c -o Timer.lo Timer.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include -g -O2 -MT Timer.lo -MD -MP -MF .deps/Timer.Tpo -c Timer.cpp -fPIC -DPIC -o .libs/Timer.o
In file included from Timer.cpp:13:0:
Timer.h:17:17: fatal error: mpi.h: No such file or directory
compilation terminated.
make[2]: *** [Timer.lo] Error 1
make[2]: Leaving directory `/ESyS-
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/ESyS-
make: *** [all] Error 2
Revision history for this message
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#2 |
I just noticed that the problem actually begins when I try
sh autogen.sh
I get some warnings:
juan@juan-
configure.ac:266: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/
../../lib/
../../lib/
../../lib/
../../lib/
../../lib/
Config/
configure.ac:266: the top level
configure.ac:275: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/
../../lib/
../../lib/
../../lib/
../../lib/
../../lib/
Config/
configure.ac:275: the top level
configure.ac:266: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/
../../lib/
../../lib/
../../lib/
../../lib/
../../lib/
Config/
configure.ac:266: the top level
configure.ac:275: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/
../../lib/
../../lib/
../../lib/
../../lib/
../../lib/
Config/
configure.ac:275: the top level
configure.ac:266: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/
../../lib/
../../lib/
../../lib/
../../lib/
../../lib/
Config/
configure.ac:266: the top level
configure.ac:275: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/
../../lib/
../../lib/
../../lib/
../../lib/
../../lib/
Config/
configure.ac:275: the top level
configure.ac:266: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/
../../lib/
../../lib/
../../lib/
../../lib/
../../lib/
Config/
configure.ac:266: the top level
configure.ac:275: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
../../lib/
../../lib/
../../lib/
../../lib/
../../lib/
../../lib/
Config/
configure.ac:275: the top level
Revision history for this message
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#3 |
Hello,
the fix is already committed, thanks for pointing that out.
I hope you are able to install esys-particle from PPA after
it will be built on build-servers.
Anton
2012/9/5 Juan Cardenas <email address hidden>:
> Question #207711 on ESyS-Particle changed:
> https:/
>
> Juan Cardenas gave more information on the question:
> I just noticed that the problem actually begins when I try
> sh autogen.sh
>
> I get some warnings:
>
> juan@juan-
> configure.ac:266: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> Config/
> configure.ac:266: the top level
> configure.ac:275: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> Config/
> configure.ac:275: the top level
> configure.ac:266: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> Config/
> configure.ac:266: the top level
> configure.ac:275: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> Config/
> configure.ac:275: the top level
> configure.ac:266: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> Config/
> configure.ac:266: the top level
> configure.ac:275: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> Config/
> configure.ac:275: the top level
> configure.ac:266: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> Config/
> configure.ac:266: the top level
> configure.ac:275: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> ../../lib/
> Config/
> configure.ac:275: the top level
>
> --
> You received this question notification because you are an answer
> contact for ESyS-Particle.
Revision history for this message
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#4 |
ah, you are right it works now thank you Anton