Compiling with Intel compiler

On 28 February 2013 15:50, Pietro Maximoff
<email address hidden> wrote:
> New question #223081 on DOLFIN:
> https://answers.launchpad.net/dolfin/+question/223081
>
> Has anyone managed to compile FEniCS with the latest Intel compiler. Everything builds fine for me until Parmetis when I get an error.
>

Yes. I build DOLFIN often with the Intel compiler.

Garth

> Pietro
>
> --
> You received this question notification because you are a member of
> DOLFIN Team, which is an answer contact for DOLFIN.

Excellent. Garth, if you wouldn't mind, could you walk me through your process.

Thanks in advance.

Pietro

icpc works fine for me too, though you may have to set a few flags to keep it happy.
Maybe you can post the error you are getting when things go wrong for you?

Chris

Hi

I export the appropriate variables:

export CC = icc
export CXX = icpc
export FC = ifort
export F77 = ifort

Then I run dorsal.sh after which I get:

ld: error: ../libmetis/libmetis.a(memory.c.o): requires dynamic R_X86_64_PC32 reloc against 'malloc' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(memory.c.o): unsupported reloc 23 against local symbol
...
...
ld: error: ../libmetis/libmetis.a(error.c.o): unsupported reloc 23 against local symbol
ld: error: ../libmetis/libmetis.a(error.c.o): requires dynamic R_X86_64_PC32 reloc against 'longjmp' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(error.c.o): unsupported reloc 23 against local symbol
...
...
ld: error: ../libmetis/libmetis.a(error.c.o): unsupported reloc 23 against local symbol
ld: error: ../libmetis/libmetis.a(mcore.c.o): requires dynamic R_X86_64_32 reloc which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(auxapi.c.o): requires dynamic R_X86_64_PC32 reloc against 'free' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(parmetis.c.o): requires dynamic R_X86_64_PC32 reloc against 'libmetis__SetupCtrl' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(options.c.o): requires dynamic R_X86_64_32 reloc which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(compress.c.o): requires dynamic R_X86_64_32 reloc which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(graph.c.o): requires dynamic R_X86_64_32 reloc which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(wspace.c.o): requires dynamic R_X86_64_PC32 reloc against 'gk_mcoreCreate' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(timing.c.o): requires dynamic R_X86_64_32 reloc which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(util.c.o): requires dynamic R_X86_64_PC32 reloc against 'libmetis__isrand' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(kmetis.c.o): requires dynamic R_X86_64_PC32 reloc against 'gk_malloc_init' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(ometis.c.o): requires dynamic R_X86_64_PC32 reloc against 'gk_malloc_init' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(gklib.c.o): requires dynamic R_X86_64_32 reloc which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(srefine.c.o): requires dynamic R_X86_64_PC32 reloc against 'gk_CPUSeconds' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(pmetis.c.o): requires dynamic R_X86_64_PC32 reloc against 'gk_malloc_init' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(util.c.o): requires unsupported dynamic reloc 11; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(timers.c.o): requires dynamic R_X86_64_PC32 reloc against 'gettimeofday' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(random.c.o): requires dynamic R_X86_64_PC32 reloc against 'srand' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(kwayrefine.c.o): requires dynamic R_X86_64_PC32 reloc against 'gk_CPUSeconds' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(contig.c.o): requires dynamic R_X86_64_32 reloc which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(coarsen.c.o): requires dynamic R_X86_64_PC32 reloc against 'gk_CPUSeconds' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(refine.c.o): requires dynamic R_X86_64_PC32 reloc against 'gk_CPUSeconds' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(sfm.c.o): requires dynamic R_X86_64_PC32 reloc against 'libmetis__wspacepush' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(initpart.c.o): requires dynamic R_X86_64_PC32 reloc against 'libmetis__wspacepush' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(kwayfm.c.o): requires dynamic R_X86_64_PC32 reloc against 'libmetis__Greedy_McKWayCutOptimize' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(bucketsort.c.o): requires dynamic R_X86_64_PC32 reloc against 'libmetis__wspacepush' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(minconn.c.o): requires dynamic R_X86_64_PC32 reloc against 'libmetis__wspacepush' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(debug.c.o): requires dynamic R_X86_64_PC32 reloc against 'libmetis__iargmax' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(fm.c.o): requires dynamic R_X86_64_PC32 reloc against 'libmetis__FM_Mc2WayCutRefine' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(separator.c.o): requires dynamic R_X86_64_PC32 reloc against 'libmetis__wspacepush' which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(mincover.c.o): requires dynamic R_X86_64_32 reloc which may overflow at runtime; recompile with -fPIC
ld: error: ../libmetis/libmetis.a(balance.c.o): requires dynamic R_X86_64_PC32 reloc against 'libmetis__ComputeLoadImbalanceDiff' which may overflow at runtime; recompile with -fPIC
make[3]: *** [libparmetis/libparmetis.so] Error 1
make[3]: Leaving directory `/home/pietro/FEniCS_Intel/FEniCS/src/parmetis-4.0.2/build/Linux-x86_64'
make[2]: *** [libparmetis/CMakeFiles/parmetis.dir/all] Error 2
make[2]: Leaving directory `/home/pietro/FEniCS_Intel/FEniCS/src/parmetis-4.0.2/build/Linux-x86_64'
make[1]: *** [all] Error 2
make[1]: Leaving directory `/home/pietro/FEniCS_Intel/FEniCS/src/parmetis-4.0.2/build/Linux-x86_64'
make: *** [all] Error 2
Failure with exit status: 2
Exit message: There was a problem building parmetis-4.0.2.

Pietro

Thanks Chris Richardson, that solved my question.