Yade

ImportError: libpost_vtk.so: undefined symbol: cholmod_defaults on Red Hat

Asked by Xin Li

Hi everyone,
I am installing the source code on the cluster. But when I launch yade, and importError occures as follows:
Welcome to Yade 2022-09-26.git-b31bb2d
Using python version: 3.6.3 (default, Mar 17 2020, 11:51:52)
[GCC 8.3.1 20190507 (Red Hat 8.3.1-4)]
Traceback (most recent call last):
  File "./yadeCloud", line 151, in <module>
    import yade
  File "/lustre/rcghead1/users/c3358697/myYade/install/lib64/yadeCloud/py/yade/__init__.py", line 75, in <module>
    from yade import boot
ImportError: /lustre/rcghead1/users/c3358697/myYade/install/lib64/yadeCloud/libpost_vtk.so: undefined symbol: cholmod_defaults

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Xin Li (portal3) said : 		#1
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Jérôme Duriez (jduriez) said : 		#2

Hi,

I guess it is necessary to mention the operating system of that cluster, to start with.

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Xin Li (portal3) said : 		#3

Hi Jérôme,

Thank you for your reply. The operating system of the cluster is Red Hat 8.3.1-4. There might be an issue on the cluster as the same version of source code can be installed and run on the PC.

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Jérôme Duriez (jduriez) said : 		#4

That operating system is indeed outside of those (Debian-based) classically supported for YADE usage. See the list / image at https://yade-dem.org/doc/installation.html#packages to have an idea. Until another answer comes by someone else more knowledgeable than me on this aspect, you're probably on your own, I'm afraid..

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Launchpad Janitor (janitor) said : 		#5

This question was expired because it remained in the 'Needs information' state without activity for the last 15 days.