VTKRecorder is not defined
The error messages is followed:
: yade-2022-
Welcome to Yade 2022-01-
Using python version: 3.6.9 (default, Dec 8 2021, 21:08:43)
[GCC 8.4.0]
TCP python prompt on localhost:9000, auth cookie `yessud'
XMLRPC info provider on http://
Running script /home/jsmoon/
Traceback (most recent call last):
File "/usr/local/
execfile(
File "/usr/lib/
exec_(code, myglobals, mylocals)
File "../../
VTKRecorder
NameError: name 'VTKRecorder' is not defined
[[ ^L clears screen, ^U kills line. F12 controller, F11 3D view (press "h" in 3D view for help), F10 both, F9 generator, F8 plot. ]]
I set the enable VTK tab: on
//Enable VTK
ENABLE_VTK:BOOL=ON
How can I fixed it.
Question information
- Language:
- English Edit question
- Status:
- Expired
- For:
- Yade Edit question
- Assignee:
- No assignee Edit question
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- Last reply:
Revision history for this message
|
#1 |
Hello,
please provide more information: what system you use, how you installed Yade, how you run Yade, output of printAllVersions() [2], a MWE [1] (or at least actual python script)...
A MWE in this case would be just one line script:
###
VTKRecorder()
###
Cheers
Jan
[1] https:/
[2] https:/
Revision history for this message
|
#2 |
Thanks Jan,
I can share the CMakeCache which includes library information.
I installed in Ubuntu 20.04.
# This is the CMakeCache file.
# For build in directory: /home/jsmoon/
# It was generated by CMake: /usr/bin/cmake
# You can edit this file to change values found and used by cmake.
# If you do not want to change any of the values, simply exit the editor.
# If you do want to change a value, simply edit, save, and exit the editor.
# The syntax for the file is as follows:
# KEY:TYPE=VALUE
# KEY is the name of a variable in the cache.
# TYPE is a hint to GUIs for the type of VALUE, DO NOT EDIT TYPE!.
# VALUE is the current value for the KEY.
#######
# EXTERNAL cache entries
#######
//Path to a library.
AMD_LIBRARY:
//Path to a file.
BLAS_INCLUDE_
//Path to a library.
BLAS_goto2_
//Path to a library.
BLAS_openblas_
//The threading library used by boost-thread
BOOST_THREAD_
//Path to a file.
BZIP2_INCLUDE_
//Path to a library.
BZIP2_LIBRARY_
//Path to a library.
BZIP2_LIBRARY_
//Boost atomic library (debug)
Boost_ATOMIC_
//Boost atomic library (release)
Boost_ATOMIC_
//Boost chrono library (debug)
Boost_CHRONO_
//Boost chrono library (release)
Boost_CHRONO_
//Boost date_time library (debug)
Boost_DATE_
//Boost date_time library (release)
Boost_DATE_
//Boost filesystem library (debug)
Boost_FILESYSTE
//Boost filesystem library (release)
Boost_FILESYSTE
//Path to a file.
Boost_INCLUDE_
//Boost iostreams library (debug)
Boost_IOSTREAMS
//Boost iostreams library (release)
Boost_IOSTREAMS
//Boost library directory DEBUG
Boost_LIBRARY_
//Boost library directory RELEASE
Boost_LIBRARY_
//Boost log library (debug)
Boost_LOG_
//Boost log library (release)
Boost_LOG_
//Boost log_setup library (debug)
Boost_LOG_
//Boost log_setup library (release)
Boost_LOG_
//Boost python36 library (debug)
Boost_PYTHON36_
//Boost python36 library (release)
Boost_PYTHON36_
//Boost regex library (debug)
Boost_REGEX_
//Boost regex library (release)
Boost_REGEX_
//Boost serialization library (debug)
Boost_SERIALIZA
//Boost serialization library (release)
Boost_SERIALIZA
//Boost system library (debug)
Boost_SYSTEM_
//Boost system library (release)
Boost_SYSTEM_
//Boost thread library (debug)
Boost_THREAD_
//Boost thread library (release)
Boost_THREAD_
//Path to a library.
CAMD_LIBRARY:
//Path to a library.
CCOLAMD_
//Path to a file.
CGAL_INCLUDE_
//Path to a library.
CGAL_LIBRARIES:
//Enable GPU acceleration flow engine direct solver
CHOLMOD_
//Path to a file.
CHOLMOD_
//Path to a library.
CHOLMOD_
//Path to a file.
CLP2_INCLUDE_
//Path to a library.
CLP2_LIBRARY:
//Path to a library.
CLP3_LIBRARY:
//Path to a file.
CLP_INCLUDE_
//Path to a library.
CLP_LIBRARY:
//Path to a program.
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//Choose the type of build, options are: None(CMAKE_
// CMAKE_C_FLAGS used) Debug Release RelWithDebInfo MinSizeRel.
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//Enable/Disable color output during build.
CMAKE_COLOR_
//CXX compiler
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//A wrapper around 'ranlib' adding the appropriate '--plugin' option
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//Flags used by the compiler during all build types.
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//Flags used by the compiler during debug builds.
CMAKE_CXX_
//Flags used by the compiler during release builds for minimum
// size.
CMAKE_CXX_
//Flags used by the compiler during release builds.
CMAKE_CXX_
//Flags used by the compiler during release builds with debug info.
CMAKE_CXX_
//C compiler
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//A wrapper around 'ar' adding the appropriate '--plugin' option
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//Flags used by the linker.
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//Flags used by the linker during debug builds.
CMAKE_EXE_
//Flags used by the linker during release minsize builds.
CMAKE_EXE_
//Flags used by the linker during release builds.
CMAKE_EXE_
//Flags used by the linker during Release with Debug Info builds.
CMAKE_EXE_
//Enable/Disable output of compile commands during generation.
CMAKE_EXPORT_
//user executables (bin)
CMAKE_INSTALL_
//read-only architecture-
CMAKE_INSTALL_
//read-only architecture-
CMAKE_INSTALL_
//documentation root (DATAROOTDIR/
CMAKE_INSTALL_
//C header files (include)
CMAKE_INSTALL_
//info documentation (DATAROOTDIR/info)
CMAKE_INSTALL_
//object code libraries (lib/x86_
CMAKE_INSTALL_
//program executables (libexec)
CMAKE_INSTALL_
//locale-dependent data (DATAROOTDIR/
CMAKE_INSTALL_
//modifiable single-machine data (var)
CMAKE_INSTALL_
//man documentation (DATAROOTDIR/man)
CMAKE_INSTALL_
//C header files for non-gcc (/usr/include)
CMAKE_INSTALL_
//Install path prefix, prepended onto install directories.
CMAKE_INSTALL_
//system admin executables (sbin)
CMAKE_INSTALL_
//modifiable architecture-
CMAKE_INSTALL_
//read-only single-machine data (etc)
CMAKE_INSTALL_
//Path to a program.
CMAKE_LINKER:
//Path to a program.
CMAKE_MAKE_
//Flags used by the linker during the creation of modules.
CMAKE_MODULE_
//Flags used by the linker during debug builds.
CMAKE_MODULE_
//Flags used by the linker during release minsize builds.
CMAKE_MODULE_
//Flags used by the linker during release builds.
CMAKE_MODULE_
//Flags used by the linker during Release with Debug Info builds.
CMAKE_MODULE_
//Path to a program.
CMAKE_NM:
//Path to a program.
CMAKE_OBJCOPY:
//Path to a program.
CMAKE_OBJDUMP:
//Value Computed by CMake
CMAKE_PROJECT_
//Path to a program.
CMAKE_RANLIB:
//Flags used by the linker during the creation of dll's.
CMAKE_SHARED_
//Flags used by the linker during debug builds.
CMAKE_SHARED_
//Flags used by the linker during release minsize builds.
CMAKE_SHARED_
//Flags used by the linker during release builds.
CMAKE_SHARED_
//Flags used by the linker during Release with Debug Info builds.
CMAKE_SHARED_
//If set, runtime paths are not added when installing shared libraries,
// but are added when building.
CMAKE_SKIP_
//If set, runtime paths are not added when using shared libraries.
CMAKE_SKIP_
//Flags used by the linker during the creation of static libraries.
CMAKE_STATIC_
//Flags used by the linker during debug builds.
CMAKE_STATIC_
//Flags used by the linker during release minsize builds.
CMAKE_STATIC_
//Flags used by the linker during release builds.
CMAKE_STATIC_
//Flags used by the linker during Release with Debug Info builds.
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//Path to a program.
CMAKE_STRIP:
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// during the make. This is useful for debugging only. With Visual
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CMAKE_VERBOSE_
//Path to a library.
COLAMD_
//Disable all features (OFF by default)
DISABLE_
//Path to a file.
EIGEN3_
//Enable AddressSanitizer build, please see documentation
ENABLE_
//Enable CGAL
ENABLE_CGAL:BOOL=ON
//Use boost::
// MPFR (3) complex_
// Otherwise use std::complex<…>.
ENABLE_
//Enable Deformation Engine
ENABLE_
//Enable deformable solids
ENABLE_
//Enable GL2PS
ENABLE_
//Enable GTS
ENABLE_GTS:BOOL=ON
//Enable GUI
ENABLE_GUI:BOOL=ON
//Enable LBM engine (very experimental)
ENABLE_
//Enable direct solver for the flow engines (experimental)
ENABLE_
//Enable liquid control (very experimental), see [Mani2013] for
// details
ENABLE_
//Use boost::log library for logging (ON by default)
ENABLE_
//Enable level-set shape description
ENABLE_
//Enable arbitrary precision of bitmask variables (only Body::groupMask
// yet implemented) (experimental). Use -DMASK_
// to set number of used bits (256 by default)
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// predicates)
ENABLE_MPFR:BOOL=ON
//Enable MPI environement and communications, required for coupling
// Yade with OpenFOAM
ENABLE_MPI:BOOL=ON
//Generate script for oar-based task scheduler
ENABLE_OAR:BOOL=OFF
//Enable OpenMP
ENABLE_
//Enable the partially saturated clay engine
ENABLE_
//Enable one-phase flow engines
ENABLE_
//Enable PotentialBlocks
ENABLE_
//Enable potential particles
ENABLE_
//Enable profiling, e.g. shows some more metrics, which can define
// bottlenecks of the code (OFF by default)
ENABLE_
//allow using twice, quadruple or higher precisions of Real
ENABLE_
//Enable SPH
ENABLE_SPH:BOOL=OFF
//Enable thermal engine (experimental)
ENABLE_
//Enable two-phase flow engines
ENABLE_
//enable useful compiler errors which help a lot in error-free
// development.
ENABLE_
//Enable VTK
ENABLE_VTK:BOOL=ON
//Path to a file.
FORCE_FREEGLUT_
//Path to a file.
FREEGLUT_
//Path to a library.
FREEGLUT_
//Path to a file.
GL2PS_INCLUDE_
//Path to a library.
GL2PS_LIBRARY:
//Path to a file.
GLUT_INCLUDE_
//Path to a library.
GLUT_Xi_
//Path to a library.
GLUT_Xmu_
//Path to a library.
GLUT_glut_
//Path to a library.
GMPXX_LIBRARIES
//Path to a file.
GMP_INCLUDE_
//Path to a library.
GMP_LIBRARIES:
//preferred path to GTS (gts-config)
GSL_CONFIG_
//Path to a program.
GTS_CONFIG:
//INTERNAL
GTS_EXE_
//INTERNAL
GTS_INCLUDE_
//Path to a library.
LAPACK_
//Path to a library.
LAPACK_
//default MAX_LOG_LEVEL
MAX_LOG_
//Path to a file.
METIS_INCLUDE_
//Path to a library.
METIS_LIBRARY:
//Path to a file.
MPC_INCLUDES:
//Path to a library.
MPC_LIBRARIES:
//Path to a file.
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//Path to a library.
MPFR_LIBRARIES:
//mpi4py include path
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//Executable for running MPI programs.
MPIEXEC_
//Maximum number of processors available to run MPI applications.
MPIEXEC_
//Flag used by MPI to specify the number of processes for mpiexec;
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MPIEXEC_
//These flags will be placed after all flags passed to mpiexec.
MPIEXEC_
//These flags will be directly before the executable that is being
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MPIEXEC_
//MPI CXX additional include directories
MPI_CXX_
//MPI compiler for CXX
MPI_CXX_
//MPI CXX compilation definitions
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//MPI CXX compilation options
MPI_CXX_
//Path to a file.
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//MPI CXX libraries to link against
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//MPI CXX linker flags
MPI_CXX_
//If true, the MPI-2 C++ bindings are disabled using definitions.
MPI_CXX_
//MPI C additional include directories
MPI_C_ADDITIONA
//MPI compiler for C
MPI_C_COMPILER:
//MPI C compilation definitions
MPI_C_COMPILE_
//MPI C compilation options
MPI_C_COMPILE_
//Path to a file.
MPI_C_HEADER_
//MPI C libraries to link against
MPI_C_LIB_
//MPI C linker flags
MPI_C_LINK_
//Location of the mpi library for MPI
MPI_mpi_
//Location of the mpi_cxx library for MPI
MPI_mpi_
//Path to a library.
OPENBLAS_
//Path to a file.
OPENGL_
//Path to a file.
OPENGL_
//Path to a file.
OPENGL_
//Path to a library.
OPENGL_
//Path to a library.
OPENGL_
//Path to a library.
OPENGL_
//Path to a library.
OPENGL_
//Path to a library.
OPENGL_
//Path to a file.
OPENGL_
//CXX compiler flags for OpenMP parallelization
OpenMP_
//CXX compiler libraries for OpenMP parallelization
OpenMP_
//C compiler flags for OpenMP parallelization
OpenMP_
//C compiler libraries for OpenMP parallelization
OpenMP_
//Path to the gomp library for OpenMP
OpenMP_
//Path to the pthread library for OpenMP
OpenMP_
//pkg-config executable
PKG_CONFIG_
//user defined python executable
PYTHON_
//Path to a file.
PYTHON_
//Path to a library.
PYTHON_
//Path to a library.
PYTHON_
//Force python version to the given one. Defaults to -DPYTHON_VERSION=-1
// which automatically uses the newest available python version
// on the system.
PYTHON_
//Location of Python module IPython
PY_IPython:
//Location of Python module Xlib
PY_Xlib:
//Location of Python module future
PY_future:
//Location of Python module matplotlib
PY_matplotlib:
//Location of Python module past
PY_past:
//Location of Python module pygraphviz
PY_pygraphviz:
//Location of Python module tkinter
PY_tkinter:
//Path to a file.
QGLVIEWER_
//Path to a library.
QGLVIEWER_
//The directory containing a CMake configuration file for Qt5Core.
Qt5Core_
//The directory containing a CMake configuration file for Qt5Gui.
Qt5Gui_
//The directory containing a CMake configuration file for Qt5OpenGL.
Qt5OpenGL_
//The directory containing a CMake configuration file for Qt5Widgets.
Qt5Widgets_
//The directory containing a CMake configuration file for Qt5Xml.
Qt5Xml_
//The directory containing a CMake configuration file for Qt5.
Qt5_DIR:
//Path to a library.
SUITESPARSECONF
//USE Qt5 for GUI
USE_QT5:BOOL=ON
//The directory containing a CMake configuration file for VTK.
VTK_DIR:
//Dependencies for target
WeightedAverage
//Value Computed by CMake
Yade_BINARY_
//Value Computed by CMake
Yade_SOURCE_
//Path to a file.
ZLIB_INCLUDE_
//Path to a library.
ZLIB_LIBRARY_
//Path to a library.
ZLIB_LIBRARY_
//Dependencies for the target
_GLViewer_
//Dependencies for target
_customConverte
//Dependencies for the target
_gts_LIB_
//Dependencies for target
_libVersions_
//Dependencies for target
_log_LIB_
//Dependencies for target
_math_LIB_
//Dependencies for target
_minieigenHP_
//Dependencies for target
_packObb_
//Dependencies for the target
_packPredicates
//Dependencies for target
_packSpheres_
//Dependencies for target
_polyhedra_
//Dependencies for target
_utils_
//Dependencies for the target
boot_LIB_
//Dependencies for the target
pkg_common_
//Dependencies for the target
pkg_dem_
//Dependencies for the target
pkg_fem_
//Dependencies for the target
pkg_lbm_
//Dependencies for the target
pkg_levelSet_
//Dependencies for the target
pkg_openfoam_
//Dependencies for the target
pkg_pfv_
//Dependencies for the target
pkg_polyhedra_
//Dependencies for the target
pkg_potential_
//Dependencies for the target
post_image_
//Dependencies for the target
post_vtk_
//Dependencies for the target
pre_dem_
//Dependencies for the target
pre_potential_
//Dependencies for target
wrapper_
//Dependencies for target
yade_LIB_
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Best regards,
Jeseung Moon
Revision history for this message
|
#3 |
Hello,
what is the output of printAllVersions() from yade [2]?
> //The directory containing a CMake configuration file for VTK.
> VTK_DIR:
this seems very suspicious.
At least it should not be in "bin", but rather something like "lib".
Could you try using a system-wide VTK?
Cheers
Jan
Revision history for this message
|
#4 |
Hello, Jan!
I compiled the VTK installation to the bin folder. And when choosing VTK_dir, other directories were not detected as a VTK_dir.
I attatched printAllVersion()
```
Yade version : 2022-01-
Yade features : LOGGER USEFUL_ERRORS COMPLEX_MP MPFR MPC OPENMP GTS QT5 CGAL PFVFLOW PFVFLOW LINSOLV MPI TWOPHASEFLOW LS_DEM FEMLIKE GL2PS LBMFLOW THERMAL POTENTIAL_PARTICLES POTENTIAL_BLOCKS
Yade config dir: ~/.yade-
Yade precision : 53 bits, 15 decimal places, without mpmath, PrecisionDouble
```
Libraries used :
| library | cmake | C++ |
| ------------- | -------
| boost | 107800 | 1.78.0 |
| cgal | | 4.11 |
| clp | 1.16.11 | 1.16.11 |
| cmake | 3.10.2 | |
| coinutils | 2.10.14 | 2.10.14 |
| compiler | /usr/bin/g++-7 7.5.0 | gcc 7.5.0 |
| eigen | 3.4.0 | 3.4.0 |
| freeglut | 2.8.1 | |
| gl | | 20190911 |
| ipython | 5.5.0 | |
| metis | | 5.1.0 |
| mpc | 1.1.0 | 1.1.0 |
| mpfr | 4.0.1 | 4.0.1 |
| mpi | 3.1 | ompi:2.1.1 |
| mpi4py | 2.0.0 | |
| mpmath | 1.0.0 | |
| openblas | | OpenBLAS 0.2.20 |
| python | 3.6.9 | 3.6.9 |
| qglviewer | | 2.6.3 |
| qt | | 5.9.5 |
| sphinx | 1.6.7-final-0 | |
| sqlite | | 3.22.0 |
| suitesparse | 5.1.2 | 5.1.2 |
```
Linux version : Ubuntu 18.04.4 LTS
Architecture : amd64
Little endian : True
Best regards,
Jeseung Moon
Revision history for this message
|
#5 |
As you see, VTK is not present in the output of printAllVersions().
I.e., Yade was compiled without VTK.
What is the output of cmake?
Can you try a system VTK, instead of self-installed version?
Why are you compiling Yade? Would a package [3], yadedaily for example, be an option?
Cheers
Jan
Revision history for this message
|
#6 |
Thanks Jan,
First of all, I am making different contact and bonding model, so I need to compile yade to check the new model.
Also, I have already tried to use yadedaily and a system VTK, but VTK_dir was not detected automatically during make process. So, I manually set the direction of VTK.
One question regarding VTK:
I installed VTK9.1.0 and this version is available to YADE?
Best regards,
Jeseung Moon
Revision history for this message
|
#7 |
Hello,
> but VTK_dir was not detected automatically during make process.
what is the output of cmake?
> So, I manually set the direction of VTK.
to what value?
My is (automatically detected, on Ubuntu 18.04)
VTK_DIR:
> I installed VTK9.1.0 and this version is available to YADE?
I think it should work..
but anyway I would start with the "system default" libraries.
Anyway, I strongly recommend to compile and install such libraries in more "logical" way, e.g. not all compilation/
Cheers
Jan
Revision history for this message
|
#8 |
This question was expired because it remained in the 'Needs information' state without activity for the last 15 days.