unable to locate package yadedaily in Ubuntu 16.04

Asked by Nicholas Ng

Hi all,

I plan to install yadedaily on Ubuntu 16.04. I copy and paste the code as stated in Yade webpage, but the last message I got from terminal is "unable to locate package yadedaily". Below is the message from terminal:

======================================================================================

nng@nng-OptiPlex-3010:~$ sudo bash -c 'echo "deb http://www.yade-dem.org/packages/ xenial/" >> /etc/apt/sources.list'
nng@nng-OptiPlex-3010:~$ wget -O - http://www.yade-dem.org/packages/yadedev_pub.gpg | sudo apt-key add -
--2019-06-21 00:08:56-- http://www.yade-dem.org/packages/yadedev_pub.gpg
Resolving www.yade-dem.org (www.yade-dem.org)... 194.254.65.201
Connecting to www.yade-dem.org (www.yade-dem.org)|194.254.65.201|:80... connected.
HTTP request sent, awaiting response... 200 OK
Length: 3143 (3.1K)
Saving to: ‘STDOUT’

- 100%[===================>] 3.07K --.-KB/s in 0s

2019-06-21 00:08:56 (440 MB/s) - written to stdout [3143/3143]

OK
nng@nng-OptiPlex-3010:~$ sudo apt-get update
Hit:2 http://my.archive.ubuntu.com/ubuntu xenial InRelease
Get:1 http://www.yade-dem.org/packages xenial/ InRelease [2,443 B]
Get:3 http://security.ubuntu.com/ubuntu xenial-security InRelease [109 kB]
Get:4 http://my.archive.ubuntu.com/ubuntu xenial-updates InRelease [109 kB]
Get:5 http://www.yade-dem.org/packages xenial/ Packages [2,187 B]
Ign:5 http://www.yade-dem.org/packages xenial/ Packages
Get:5 http://www.yade-dem.org/packages xenial/ Packages [1,945 B]
Ign:5 http://www.yade-dem.org/packages xenial/ Packages
Get:6 http://my.archive.ubuntu.com/ubuntu xenial-backports InRelease [107 kB]
Get:5 http://www.yade-dem.org/packages xenial/ Packages [6,331 B]
Err:5 http://www.yade-dem.org/packages xenial/ Packages
  Hash Sum mismatch
Fetched 334 kB in 2s (134 kB/s)
Reading package lists... Done
W: Target Packages (Packages) is configured multiple times in /etc/apt/sources.list:52 and /etc/apt/sources.list:53
W: Target Translations (en_US) is configured multiple times in /etc/apt/sources.list:52 and /etc/apt/sources.list:53
W: Target Translations (en) is configured multiple times in /etc/apt/sources.list:52 and /etc/apt/sources.list:53
W: Target Packages (Packages) is configured multiple times in /etc/apt/sources.list:52 and /etc/apt/sources.list:54
W: Target Translations (en_US) is configured multiple times in /etc/apt/sources.list:52 and /etc/apt/sources.list:54
W: Target Translations (en) is configured multiple times in /etc/apt/sources.list:52 and /etc/apt/sources.list:54
E: Failed to fetch http://www.yade-dem.org/packages/xenial/Packages Hash Sum mismatch
E: Some index files failed to download. They have been ignored, or old ones used instead.
W: Target Packages (Packages) is configured multiple times in /etc/apt/sources.list:52 and /etc/apt/sources.list:53
W: Target Translations (en_US) is configured multiple times in /etc/apt/sources.list:52 and /etc/apt/sources.list:53
W: Target Translations (en) is configured multiple times in /etc/apt/sources.list:52 and /etc/apt/sources.list:53
W: Target Packages (Packages) is configured multiple times in /etc/apt/sources.list:52 and /etc/apt/sources.list:54
W: Target Translations (en_US) is configured multiple times in /etc/apt/sources.list:52 and /etc/apt/sources.list:54
W: Target Translations (en) is configured multiple times in /etc/apt/sources.list:52 and /etc/apt/sources.list:54
nng@nng-OptiPlex-3010:~$ sudo apt-get install yadedaily
Reading package lists... Done
Building dependency tree
Reading state information... Done
E: Unable to locate package yadedaily

===================================================================================================

Can anyone advise me how to solve this problem? I don't know where it goes wrong.

Thank you and Regards,
Nicholas Ng

Question information

Language:
English Edit question
Status:
Solved
For:
Yade Edit question
Assignee:
No assignee Edit question
Solved by:
Manfred Hampl
Solved:
Last query:
Last reply:
Revision history for this message
Manfred Hampl (m-hampl) said :
#1
Revision history for this message
Nicholas Ng (nngyongjie) said :
#2

Hi Manfred,

>> see https://answers.launchpad.net/yade/+question/680432

I have look at the answer you provided in the link above.

I follow your suggested steps, but in the end it seems like I still saw error messages. Below is the response I get from the terminal:

======================================================================================================

nng@nng-OptiPlex-3010:~$ wget http://www.yade-dem.org/packages/xenial/yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb
--2019-06-21 03:01:22-- http://www.yade-dem.org/packages/xenial/yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb
Resolving www.yade-dem.org (www.yade-dem.org)... 194.254.65.201
Connecting to www.yade-dem.org (www.yade-dem.org)|194.254.65.201|:80... connected.
HTTP request sent, awaiting response... 200 OK
Length: 1713824 (1.6M) [application/x-debian-package]
Saving to: ‘yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb’

yadedaily_2018.02b- 100%[===================>] 1.63M 284KB/s in 7.2s

2019-06-21 03:01:30 (234 KB/s) - ‘yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb’ saved [1713824/1713824]

nng@nng-OptiPlex-3010:~$ wget http://www.yade-dem.org/packages/xenial/libyadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb
--2019-06-21 03:01:43-- http://www.yade-dem.org/packages/xenial/libyadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb
Resolving www.yade-dem.org (www.yade-dem.org)... 194.254.65.201
Connecting to www.yade-dem.org (www.yade-dem.org)|194.254.65.201|:80... connected.
HTTP request sent, awaiting response... 200 OK
Length: 9459988 (9.0M) [application/x-debian-package]
Saving to: ‘libyadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb’

libyadedaily_2018.0 100%[===================>] 9.02M 1.27MB/s in 10s

2019-06-21 03:01:54 (888 KB/s) - ‘libyadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb’ saved [9459988/9459988]

nng@nng-OptiPlex-3010:~$ wget http://www.yade-dem.org/packages/xenial/yadedaily-doc_2018.02b-290bf6a54e~xenial-1_all.deb
--2019-06-21 03:02:22-- http://www.yade-dem.org/packages/xenial/yadedaily-doc_2018.02b-290bf6a54e~xenial-1_all.deb
Resolving www.yade-dem.org (www.yade-dem.org)... 194.254.65.201
Connecting to www.yade-dem.org (www.yade-dem.org)|194.254.65.201|:80... connected.
HTTP request sent, awaiting response... 200 OK
Length: 9168166 (8.7M) [application/x-debian-package]
Saving to: ‘yadedaily-doc_2018.02b-290bf6a54e~xenial-1_all.deb’

yadedaily-doc_2018.02b-290bf6a54e 100%[==========================================================>] 8.74M 1.60MB/s in 6.0s

2019-06-21 03:02:29 (1.46 MB/s) - ‘yadedaily-doc_2018.02b-290bf6a54e~xenial-1_all.deb’ saved [9168166/9168166]

nng@nng-OptiPlex-3010:~$ wget http://www.yade-dem.org/packages/xenial/yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb
--2019-06-21 03:02:55-- http://www.yade-dem.org/packages/xenial/yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb
Resolving www.yade-dem.org (www.yade-dem.org)... 194.254.65.201
Connecting to www.yade-dem.org (www.yade-dem.org)|194.254.65.201|:80... connected.
HTTP request sent, awaiting response... 200 OK
Length: 1713824 (1.6M) [application/x-debian-package]
Saving to: ‘yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb.1’

yadedaily_2018.02b-290bf6a54e~xen 100%[==========================================================>] 1.63M 760KB/s in 2.2s

2019-06-21 03:02:57 (760 KB/s) - ‘yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb.1’ saved [1713824/1713824]

nng@nng-OptiPlex-3010:~$ sudo dpkg --install ./*yadedaily*.deb
[sudo] password for nng:
Selecting previously unselected package libyadedaily:amd64.
(Reading database ... 178197 files and directories currently installed.)
Preparing to unpack .../libyadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb ...
Unpacking libyadedaily:amd64 (2018.02b-290bf6a54e~xenial-1) ...
Selecting previously unselected package yadedaily.
Preparing to unpack .../yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb ...
Unpacking yadedaily (2018.02b-290bf6a54e~xenial-1) ...
Selecting previously unselected package yadedaily-doc.
Preparing to unpack .../yadedaily-doc_2018.02b-290bf6a54e~xenial-1_all.deb ...
Unpacking yadedaily-doc (2018.02b-290bf6a54e~xenial-1) ...
dpkg: dependency problems prevent configuration of libyadedaily:amd64:
 libyadedaily:amd64 depends on libopenblas-dev; however:
  Package libopenblas-dev is not installed.
 libyadedaily:amd64 depends on freeglut3; however:
  Package freeglut3 is not installed.
 libyadedaily:amd64 depends on libboost-python1.58.0; however:
  Package libboost-python1.58.0 is not installed.
 libyadedaily:amd64 depends on libboost-regex1.58.0; however:
  Package libboost-regex1.58.0 is not installed.
 libyadedaily:amd64 depends on libboost-serialization1.58.0; however:
  Package libboost-serialization1.58.0 is not installed.
 libyadedaily:amd64 depends on libboost-thread1.58.0; however:
  Package libboost-thread1.58.0 is not installed.
 libyadedaily:amd64 depends on libcgal11v5; however:
  Package libcgal11v5 is not installed.
 libyadedaily:amd64 depends on libcholmod3.0.6; however:
  Package libcholmod3.0.6 is not installed.
 libyadedaily:amd64 depends on libgl2ps0; however:
  Package libgl2ps0 is not installed.
 libyadedaily:amd64 d
dpkg: error processing package libyadedaily:amd64 (--install):
 dependency problems - leaving unconfigured
dpkg: dependency problems prevent configuration of yadedaily:
 yadedaily depends on gnuplot; however:
  Package gnuplot is not installed.
 yadedaily depends on gtk2-engines-pixbuf; however:
  Package gtk2-engines-pixbuf is not installed.
 yadedaily depends on ipython; however:
  Package ipython is not installed.
 yadedaily depends on libyadedaily (= 2018.02b-290bf6a54e~xenial-1); however:
  Package libyadedaily:amd64 is not configured yet.
 yadedaily depends on python-yadedaily (= 2018.02b-290bf6a54e~xenial-1); however:
  Package python-yadedaily is not installed.
 yadedaily depends on python-numpy (>= 1:1.10.0~b1); however:
  Package python-numpy is not installed.
 yadedaily depends on python-numpy-abi9; however:
  Package python-numpy-abi9 is not installed.

dpkg: error processing package yadedaily (--install):
 dependency problems - leaving unconfigured
dpkg: dependency problems prevent configuration of yadedaily-doc:
 yadedaily-doc depends on libjs-sphinxdoc (>= 1.0); however:
  Package libjs-sphinxdoc is not installed.

dpkg: error processing package yadedaily-doc (--install):
 dependency problems - leaving unconfigured
Processing triggers for man-db (2.7.5-1) ...
Processing triggers for gnome-menus (3.13.3-6ubuntu3.1) ...
Processing triggers for desktop-file-utils (0.22-1ubuntu5.2) ...
Processing triggers for bamfdaemon (0.5.3~bzr0+16.04.20180209-0ubuntu1) ...
Rebuilding /usr/share/applications/bamf-2.index...
Processing triggers for mime-support (3.59ubuntu1) ...
Processing triggers for doc-base (0.10.7) ...
Processing 1 added doc-base file...
Errors were encountered while processing:
 libyadedaily:amd64
 yadedaily
 yadedaily-doc

==============================================================================================

Are those error messages major concern?

Thank you and Regards,
Nicholas Ng

Revision history for this message
Manfred Hampl (m-hampl) said :
#3

Execute the command

sudo apt install -f

and it will hopefully solve the problem.
If this command shows error messages, then please copy/paste the full output as done before.

Revision history for this message
Nicholas Ng (nngyongjie) said :
#4

Hi Manfred,

I follow your advice above, and I get the following message:

=======================================================================================

nng@nng-OptiPlex-3010:~$ sudo apt install -f
Reading package lists... Done
Building dependency tree
Reading state information... Done
Correcting dependencies... Done
The following additional packages will be installed:
  aglfn freeglut3 gfortran gfortran-5 gnuplot gnuplot-tex gnuplot5-data gnuplot5-qt javascript-common libaec0 libamd2.4.1 libarmadillo6 libarpack2
  libblas-common libblas-dev libblas3 libboost-python1.58.0 libboost-regex1.58.0 libboost-serialization1.58.0 libboost-thread1.58.0 libcamd2.4.1
  libccolamd2.9.1 libcgal11v5 libcholmod3.0.6 libdap17v5 libdapclient6v5 libepsilon1 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5
  libgfortran-5-dev libgfortran3 libgif7 libgl2ps0 libhdf4-0-alt libhdf5-10 libhwloc-plugins libhwloc5 libibverbs1 libjs-jquery libjs-sphinxdoc
  libjs-underscore libjsoncpp1 libkmlbase1 libkmldom1 libkmlengine1 liblua5.1-0 libminizip1 libmysqlclient20 libnetcdf-c++4 libnetcdf11 libodbc1
  libogdi3.2 libopenblas-base libopenblas-dev libopenjp2-7 libopenmpi1.10 libpq5 libproj9 libqglviewer2 libspatialite7 libsuperlu4 libsz2
  liburiparser1 libvtk6.2 libwxbase3.0-0v5 libwxgtk3.0-0v5 libxerces-c3.1 mysql-common ocl-icd-libopencl1 odbcinst odbcinst1debian2 openmpi-bin
  openmpi-common proj-bin proj-data
Suggested packages:
  gfortran-multilib gfortran-doc gfortran-5-multilib gfortran-5-doc libgfortran3-dbg feedgnuplot gnuplot-doc libgnuplot-iostream-dev python-gnuplot
  gnuplot5-doc apache2 | lighttpd | httpd liblapack-doc-man liblapack-doc libhdf4-doc libhdf4-alt-dev hdf4-tools libnetcdf4 libhwloc-contrib-plugins
  libmyodbc odbc-postgresql tdsodbc unixodbc-bin ogdi-bin mpi-default-bin vtk6-doc vtk6-examples opencl-icd openmpi-checkpoint
The following packages will be REMOVED:
  yadedaily
The following NEW packages will be installed:
  aglfn freeglut3 gfortran gfortran-5 gnuplot gnuplot-tex gnuplot5-data gnuplot5-qt javascript-common libaec0 libamd2.4.1 libarmadillo6 libarpack2
  libblas-common libblas-dev libblas3 libboost-python1.58.0 libboost-regex1.58.0 libboost-serialization1.58.0 libboost-thread1.58.0 libcamd2.4.1
  libccolamd2.9.1 libcgal11v5 libcholmod3.0.6 libdap17v5 libdapclient6v5 libepsilon1 libfreexl1 libgdal1i libgeos-3.5.0 libgeos-c1v5
  libgfortran-5-dev libgfortran3 libgif7 libgl2ps0 libhdf4-0-alt libhdf5-10 libhwloc-plugins libhwloc5 libibverbs1 libjs-jquery libjs-sphinxdoc
  libjs-underscore libjsoncpp1 libkmlbase1 libkmldom1 libkmlengine1 liblua5.1-0 libminizip1 libmysqlclient20 libnetcdf-c++4 libnetcdf11 libodbc1
  libogdi3.2 libopenblas-base libopenblas-dev libopenjp2-7 libopenmpi1.10 libpq5 libproj9 libqglviewer2 libspatialite7 libsuperlu4 libsz2
  liburiparser1 libvtk6.2 libwxbase3.0-0v5 libwxgtk3.0-0v5 libxerces-c3.1 mysql-common ocl-icd-libopencl1 odbcinst odbcinst1debian2 openmpi-bin
  openmpi-common proj-bin proj-data
0 upgraded, 77 newly installed, 1 to remove and 197 not upgraded.
3 not fully installed or removed.
Need to get 75.3 MB of archives.
After this operation, 368 MB of additional disk space will be used.
Do you want to continue? [Y/n]
================================================================================================

Should I type Y or n ?

Thank you and Regards,
Nicholas Ng

Revision history for this message
Nicholas Ng (nngyongjie) said :
#5

After I type yes, then some progress goes on.

When the progress is completed, i execute this command again:

But this time I get this kind of error response:

===========================================================================================

nng@nng-OptiPlex-3010:~$ sudo dpkg --install ./*yadedaily*.deb
(Reading database ... 181066 files and directories currently installed.)
Preparing to unpack .../libyadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb ...
Unpacking libyadedaily:amd64 (2018.02b-290bf6a54e~xenial-1) over (2018.02b-290bf6a54e~xenial-1) ...
Selecting previously unselected package yadedaily.
Preparing to unpack .../yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb ...
Unpacking yadedaily (2018.02b-290bf6a54e~xenial-1) ...
Preparing to unpack .../yadedaily-doc_2018.02b-290bf6a54e~xenial-1_all.deb ...
Unpacking yadedaily-doc (2018.02b-290bf6a54e~xenial-1) over (2018.02b-290bf6a54e~xenial-1) ...
Setting up libyadedaily:amd64 (2018.02b-290bf6a54e~xenial-1) ...
dpkg: dependency problems prevent configuration of yadedaily:
 yadedaily depends on gtk2-engines-pixbuf; however:
  Package gtk2-engines-pixbuf is not installed.
 yadedaily depends on ipython; however:
  Package ipython is not installed.
 yadedaily depends on python-yadedaily (= 2018.02b-290bf6a54e~xenial-1); however:
  Package python-yadedaily is not installed.
 yadedaily depends on python-numpy (>= 1:1.10.0~b1); however:
  Package python-numpy is not installed.
 yadedaily depends on python-numpy-abi9; however:
  Package python-numpy-abi9 is not installed.

dpkg: error processing package yadedaily (--install):
 dependency problems - leaving unconfigured
Setting up yadedaily-doc (2018.02b-290bf6a54e~xenial-1) ...
Processing triggers for man-db (2.7.5-1) ...
Processing triggers for gnome-menus (3.13.3-6ubuntu3.1) ...
Processing triggers for desktop-file-utils (0.22-1ubuntu5.2) ...
Processing triggers for bamfdaemon (0.5.3~bzr0+16.04.20180209-0ubuntu1) ...
Rebuilding /usr/share/applications/bamf-2.index...
Processing triggers for mime-support (3.59ubuntu1) ...
Processing triggers for doc-base (0.10.7) ...
Processing 1 changed doc-base file...
Errors were encountered while processing:
 yadedaily
nng@nng-OptiPlex-3010:~$

=============================================================================================

Is this correct?

Regards,
Nicholas

Revision history for this message
Manfred Hampl (m-hampl) said :
#6

Execute

sudo apt install -f

again, confirm with y if necessary, and copy/paste all output.

Revision history for this message
Nicholas Ng (nngyongjie) said :
#7

I have execute

sudo apt install -f

then

y

then

sudo dpkg --install ./*yadedaily*.deb

Below is what i had for output, still got errors

=========================================================================================

nng@nng-OptiPlex-3010:~$ sudo apt install -f
[sudo] password for nng:
Reading package lists... Done
Building dependency tree
Reading state information... Done
Correcting dependencies... Done
The following packages will be REMOVED:
  yadedaily
0 upgraded, 0 newly installed, 1 to remove and 197 not upgraded.
1 not fully installed or removed.
After this operation, 4,281 kB disk space will be freed.
Do you want to continue? [Y/n] y
(Reading database ... 181492 files and directories currently installed.)
Removing yadedaily (2018.02b-290bf6a54e~xenial-1) ...
Processing triggers for gnome-menus (3.13.3-6ubuntu3.1) ...
Processing triggers for desktop-file-utils (0.22-1ubuntu5.2) ...
Processing triggers for bamfdaemon (0.5.3~bzr0+16.04.20180209-0ubuntu1) ...
Rebuilding /usr/share/applications/bamf-2.index...
Processing triggers for mime-support (3.59ubuntu1) ...
Processing triggers for man-db (2.7.5-1) ...
nng@nng-OptiPlex-3010:~$ sudo dpkg --install ./*yadedaily*.deb
(Reading database ... 181066 files and directories currently installed.)
Preparing to unpack .../libyadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb ...
Unpacking libyadedaily:amd64 (2018.02b-290bf6a54e~xenial-1) over (2018.02b-290bf6a54e~xenial-1) ...
Selecting previously unselected package yadedaily.
Preparing to unpack .../yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb ...
Unpacking yadedaily (2018.02b-290bf6a54e~xenial-1) ...
Preparing to unpack .../yadedaily-doc_2018.02b-290bf6a54e~xenial-1_all.deb ...
Unpacking yadedaily-doc (2018.02b-290bf6a54e~xenial-1) over (2018.02b-290bf6a54e~xenial-1) ...
Setting up libyadedaily:amd64 (2018.02b-290bf6a54e~xenial-1) ...
dpkg: dependency problems prevent configuration of yadedaily:
 yadedaily depends on gtk2-engines-pixbuf; however:
  Package gtk2-engines-pixbuf is not installed.
 yadedaily depends on ipython; however:
  Package ipython is not installed.
 yadedaily depends on python-yadedaily (= 2018.02b-290bf6a54e~xenial-1); however:
  Package python-yadedaily is not installed.
 yadedaily depends on python-numpy (>= 1:1.10.0~b1); however:
  Package python-numpy is not installed.
 yadedaily depends on python-numpy-abi9; however:
  Package python-numpy-abi9 is not installed.

dpkg: error processing package yadedaily (--install):
 dependency problems - leaving unconfigured
Setting up yadedaily-doc (2018.02b-290bf6a54e~xenial-1) ...
Processing triggers for man-db (2.7.5-1) ...
Processing triggers for gnome-menus (3.13.3-6ubuntu3.1) ...
Processing triggers for desktop-file-utils (0.22-1ubuntu5.2) ...
Processing triggers for bamfdaemon (0.5.3~bzr0+16.04.20180209-0ubuntu1) ...
Rebuilding /usr/share/applications/bamf-2.index...
Processing triggers for mime-support (3.59ubuntu1) ...
Processing triggers for doc-base (0.10.7) ...
Processing 1 changed doc-base file...
Errors were encountered while processing:
 yadedaily

=================================================================================================

Revision history for this message
Manfred Hampl (m-hampl) said :
#8

It seems that there is one package missing in the list.

Execute the commands

wget http://www.yade-dem.org/packages/xenial/python-yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb
sudo dpkg --install ./*yadedaily*.deb
sudo apt install -f

and report the results.

Revision history for this message
Nicholas Ng (nngyongjie) said :
#9

Hi Manfred,

Sorry for late reply. Just now I have carried out your instructions above, and below is the output:

======================================================================================================

nng@nng-OptiPlex-3010:~$ wget http://www.yade-dem.org/packages/xenial/python-yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb
--2019-06-21 16:31:05-- http://www.yade-dem.org/packages/xenial/python-yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb
Resolving www.yade-dem.org (www.yade-dem.org)... 194.254.65.201
Connecting to www.yade-dem.org (www.yade-dem.org)|194.254.65.201|:80... connected.
HTTP request sent, awaiting response... 200 OK
Length: 2110152 (2.0M) [application/x-debian-package]
Saving to: ‘python-yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb’

python-yadedaily_2018.02b-290bf6a54e~x 100%[===========================================================================>] 2.01M 1.04MB/s in 1.9s

2019-06-21 16:31:07 (1.04 MB/s) - ‘python-yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb’ saved [2110152/2110152]

nng@nng-OptiPlex-3010:~$ sudo dpkg --install ./*yadedaily*.deb
[sudo] password for nng:
(Reading database ... 181493 files and directories currently installed.)
Preparing to unpack .../libyadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb ...
Unpacking libyadedaily:amd64 (2018.02b-290bf6a54e~xenial-1) over (2018.02b-290bf6a54e~xenial-1) ...
Selecting previously unselected package python-yadedaily.
Preparing to unpack .../python-yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb ...
Unpacking python-yadedaily (2018.02b-290bf6a54e~xenial-1) ...
Preparing to unpack .../yadedaily_2018.02b-290bf6a54e~xenial-1_amd64.deb ...
Unpacking yadedaily (2018.02b-290bf6a54e~xenial-1) over (2018.02b-290bf6a54e~xenial-1) ...
Preparing to unpack .../yadedaily-doc_2018.02b-290bf6a54e~xenial-1_all.deb ...
Unpacking yadedaily-doc (2018.02b-290bf6a54e~xenial-1) over (2018.02b-290bf6a54e~xenial-1) ...
Setting up libyadedaily:amd64 (2018.02b-290bf6a54e~xenial-1) ...
dpkg: dependency problems prevent configuration of python-yadedaily:
 python-yadedaily depends on python-gts; however:
  Package python-gts is not installed.
 python-yadedaily depends on python-imaging; however:
  Package python-imaging is not installed.
 python-yadedaily depends on python-matplotlib; however:
  Package python-matplotlib is not installed.
 python-yadedaily depends on python-minieigen; however:
  Package python-minieigen is not installed.
 python-yadedaily depends on python-pyqt5; however:
  Package python-pyqt5 is not installed.
 python-yadedaily depends on python-tk; however:
  Package python-tk is not installed.
 python-yadedaily depends on python-xlib; however:
  Package python-xlib is not installed.
 python-yadedaily depends on python-numpy (>= 1:1.10.0~b1); however:
  Package python-numpy is not installed.
 python-yadedaily depends on python-numpy-abi9; however:
  Package python-numpy-abi9 is not installed.

dpkg: error processing package python-yadedaily (--install):
 dependency problems - leaving unconfigured
dpkg: dependency problems prevent configuration of yadedaily:
 yadedaily depends on gtk2-engines-pixbuf; however:
  Package gtk2-engines-pixbuf is not installed.
 yadedaily depends on ipython; however:
  Package ipython is not installed.
 yadedaily depends on python-yadedaily (= 2018.02b-290bf6a54e~xenial-1); however:
  Package python-yadedaily is not configured yet.
 yadedaily depends on python-numpy (>= 1:1.10.0~b1); however:
  Package python-numpy is not installed.
 yadedaily depends on python-numpy-abi9; however:
  Package python-numpy-abi9 is not installed.

dpkg: error processing package yadedaily (--install):
 dependency problems - leaving unconfigured
Setting up yadedaily-doc (2018.02b-290bf6a54e~xenial-1) ...
Processing triggers for man-db (2.7.5-1) ...
Processing triggers for gnome-menus (3.13.3-6ubuntu3.1) ...
Processing triggers for desktop-file-utils (0.22-1ubuntu5.2) ...
Processing triggers for bamfdaemon (0.5.3~bzr0+16.04.20180209-0ubuntu1) ...
Rebuilding /usr/share/applications/bamf-2.index...
Processing triggers for mime-support (3.59ubuntu1) ...
Processing triggers for doc-base (0.10.7) ...
Processing 1 changed doc-base file...
Errors were encountered while processing:
 python-yadedaily
 yadedaily
nng@nng-OptiPlex-3010:~$ sudo apt install -f
Reading package lists... Done
Building dependency tree
Reading state information... Done
Correcting dependencies... Done
The following additional packages will be installed:
  blt fonts-lyx gtk2-engines-pixbuf ipython libeigen3-dev libglade2-0 libgts-0.7-5 libgts-bin libjs-jquery-ui libqt4-designer libqt4-help libqt4-opengl
  libqt4-scripttools libqt4-svg libqt4-test libqt5clucene5 libqt5designer5 libqt5help5 libqtassistantclient4 libqtwebkit4 libvtk6.2-qt mayavi2
  mpi-default-bin python-apptools python-attr python-autobahn python-cairo python-cffi-backend python-chardet python-concurrent.futures python-configobj
  python-cryptography python-cycler python-dateutil python-decorator python-enum34 python-envisage python-glade2 python-gobject-2 python-gtk2 python-gts
  python-idna python-imaging python-ipaddress python-lz4 python-matplotlib python-matplotlib-data python-minieigen python-mpi4py python-msgpack
  python-numpy python-openssl python-pam python-pexpect python-pil python-pkg-resources python-ptyprocess python-pyasn1 python-pyasn1-modules
  python-pyface python-pygments python-pyparsing python-pyqt5 python-qt4 python-serial python-service-identity python-simplegeneric python-sip python-six
  python-snappy python-tk python-traits python-traitsui python-trollius python-twisted python-twisted-bin python-twisted-core python-txaio python-tz
  python-vtk6 python-wxgtk3.0 python-wxversion python-xlib python-zope.interface tk8.6-blt2.5 ttf-bitstream-vera
Suggested packages:
  blt-demo ipython-doc ipython-notebook ipython-qtconsole python-zmq libeigen3-doc libmrpt-dev libjs-jquery-ui-docs python-scipy python-configobj-doc
  python-cryptography-doc python-cryptography-vectors python-enum34-doc python-chaco python-gtk2-doc python-gobject-2-dbg dvipng ffmpeg inkscape
  python-cairocffi python-excelerator python-gobject python-matplotlib-doc python-nose python-tornado texlive-extra-utils texlive-latex-extra
  ttf-staypuft python-dev python-numpy-dbg python-numpy-doc python-openssl-doc python-openssl-dbg python-pam-dbg python-pexpect-doc python-pil-doc
  python-pil-dbg python-setuptools python-pyqt5-dbg python-qt4-dbg tix python-tk-dbg python-twisted-bin-dbg python-qt3 python-txaio-doc vtk6-doc
  vtk6-examples
The following NEW packages will be installed:
  blt fonts-lyx gtk2-engines-pixbuf ipython libeigen3-dev libglade2-0 libgts-0.7-5 libgts-bin libjs-jquery-ui libqt4-designer libqt4-help libqt4-opengl
  libqt4-scripttools libqt4-svg libqt4-test libqt5clucene5 libqt5designer5 libqt5help5 libqtassistantclient4 libqtwebkit4 libvtk6.2-qt mayavi2
  mpi-default-bin python-apptools python-attr python-autobahn python-cairo python-cffi-backend python-chardet python-concurrent.futures python-configobj
  python-cryptography python-cycler python-dateutil python-decorator python-enum34 python-envisage python-glade2 python-gobject-2 python-gtk2 python-gts
  python-idna python-imaging python-ipaddress python-lz4 python-matplotlib python-matplotlib-data python-minieigen python-mpi4py python-msgpack
  python-numpy python-openssl python-pam python-pexpect python-pil python-pkg-resources python-ptyprocess python-pyasn1 python-pyasn1-modules
  python-pyface python-pygments python-pyparsing python-pyqt5 python-qt4 python-serial python-service-identity python-simplegeneric python-sip python-six
  python-snappy python-tk python-traits python-traitsui python-trollius python-twisted python-twisted-bin python-twisted-core python-txaio python-tz
  python-vtk6 python-wxgtk3.0 python-wxversion python-xlib python-zope.interface tk8.6-blt2.5 ttf-bitstream-vera
0 upgraded, 86 newly installed, 0 to remove and 197 not upgraded.
2 not fully installed or removed.
Need to get 71.8 MB of archives.
After this operation, 255 MB of additional disk space will be used.
Do you want to continue? [Y/n] y
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Get:2 http://my.archive.ubuntu.com/ubuntu xenial/universe amd64 libgts-0.7-5 amd64 0.7.6+darcs121130-1.2 [149 kB]
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Get:5 http://my.archive.ubuntu.com/ubuntu xenial-updates/universe amd64 python-imaging all 3.1.2-0ubuntu1.1 [4,596 B]
Get:6 http://my.archive.ubuntu.com/ubuntu xenial/main amd64 python-six all 1.10.0-3 [10.9 kB]
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Get:84 http://my.archive.ubuntu.com/ubuntu xenial/main amd64 python-pam amd64 0.4.2-13.2ubuntu2 [9,932 B]
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Get:86 http://my.archive.ubuntu.com/ubuntu xenial/universe amd64 libeigen3-dev all 3.3~beta1-2 [663 kB]
Fetched 71.8 MB in 8s (8,109 kB/s)
Extracting templates from packages: 100%
Selecting previously unselected package python-numpy.
(Reading database ... 181543 files and directories currently installed.)
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update-alternatives: using /usr/lib/wx/python/wx3.0.pth to provide /usr/lib/wx/python/wx.pth (wx.pth) in auto mode
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=================================================================================================================

Regards,
Nicholas Ng

Revision history for this message
Manfred Hampl (m-hampl) said :
#10

The output looks good; yadedaily seems to be successfull installed.

Additional remarks:

"W: Target Packages (Packages) is configured multiple times in /etc/apt/sources.list:52 and /etc/apt/sources.list:53"
There seems to be a redundancy in your package management configuration file.
If line 53 in /etc/apt/sources.list probably is identical to line 52, then one of these should be deleted.

"0 upgraded, ... , 0 to remove and 197 not upgraded."
Apparently there are almost 200 package updates available that you have not yet installed on your system.
You should consider installing them (sudo apt dist-upgrade) if there is no specific reason to hold them back.

Revision history for this message
Nicholas Ng (nngyongjie) said :
#11

Hi Manfred,

Since you told me it looks like yadedaily has been successfully installed based on my previous output, I have tried execute the command:

yadedaily

To check whether it's really ok, and below are some outputs I get, there is one message about "traceback" and one about "import error",

=====================================================================================================

nng@nng-OptiPlex-3010:~$ yadedaily
Welcome to Yade 2018.02b-290bf6a54e~xenial
TCP python prompt on localhost:9000, auth cookie `uyscka'
XMLRPC info provider on http://localhost:21000
Traceback (most recent call last):
  File "/usr/bin/yadedaily", line 298, in <module>
    import yade.qt
  File "/usr/lib/x86_64-linux-gnu/yadedaily/py/yade/qt/__init__.py", line 16, in <module>
    from PyQt5 import QtWebKit, QtWebKitWidgets
ImportError: cannot import name QtWebKit

===================================================================================================

Is that a serious error for my yadedaily installed? Do I need to to do anything to fix it?

Thank you and Regards,
Nicholas Ng

Revision history for this message
Best Manfred Hampl (m-hampl) said :
#12

Installing an additional package should help:

sudo apt install python-pyqt5.qtwebkit

Revision history for this message
Nicholas Ng (nngyongjie) said :
#13

Thanks Manfred Hampl, that solved my question.

Revision history for this message
Nicholas Ng (nngyongjie) said :
#14

Hi Manfred,

I want to say thank you so much for your kind help, without your kind assistance and patience to answer to my question, I won't be able to install the yadedaily successfully for my research.

I really appreciate the help given.

Thank you and Regards,
Nicholas Ng

Revision history for this message
Nicholas Ng (nngyongjie) said :
#15

Hi Manfred,

Now i try to run a python script using yadedaily, but I get the following response about "Matplotlib":

=====================================================================================================

nng@nng-OptiPlex-3010:~$ yadedaily -j4 '/home/nng/Desktop/YADE/DST/from Irfaan/DST_parametric_study/DST_params_M4c_comp/DST_params_M4c_comp.py'
Welcome to Yade 2018.02b-290bf6a54e~xenial
TCP python prompt on localhost:9000, auth cookie `cudyss'
XMLRPC info provider on http://localhost:21000
Running script /home/nng/Desktop/YADE/DST/from Irfaan/DST_parametric_study/DST_params_M4c_comp/DST_params_M4c_comp.py
------------Simulation started------------
/usr/lib/python2.7/dist-packages/matplotlib/font_manager.py:273: UserWarning: Matplotlib is building the font cache using fc-list. This may take a moment.
  warnings.warn('Matplotlib is building the font cache using fc-list. This may take a moment.')

===================================================================================================

Is this a also a problem due to my installation? If yes, how should I solve it?

Thank you and Regards,
Nicholas Ng

Revision history for this message
Manfred Hampl (m-hampl) said :
#16

I am sorry, but this goes beyond my knowledge.
For me this seems not to have any negative consequences.
It is just a warning that a certain step may need its time, so you should be patient.

Revision history for this message
Nicholas Ng (nngyongjie) said :
#17

Hi Manfred,

Alright, thanks for your kind reply anyway !!

Regards,
Nicholas Ng