Windows 7 Wubi loaded Ubuntu 11.04 Amd64 Build boots to Busybox after update-manager -d to Ubuntu O.O. 11.10 Beta 1 how do I fix it ?

                  Boot Info Script 0.60 from 17 May 2011

============================= Boot Info Summary: ===============================

 => Windows is installed in the MBR of /dev/sda.

sda1: __________________________________________________________________________

    File system: ntfs
    Boot sector type: Windows Vista/7
    Boot sector info: No errors found in the Boot Parameter Block.
    Operating System:
    Boot files: /bootmgr /Boot/BCD

sda2: __________________________________________________________________________

    File system: ntfs
    Boot sector type: Windows Vista/7
    Boot sector info: No errors found in the Boot Parameter Block.
    Operating System: Windows 7
    Boot files: /bootmgr /boot/BCD /Windows/System32/winload.exe
                       /wubildr /ubuntu/winboot/wubildr /wubildr.mbr
                       /ubuntu/winboot/wubildr.mbr /ubuntu/disks/root.disk
                       /ubuntu/disks/swap.disk

sda2/Wubi: _____________________________________________________________________

    File system: ext4
    Boot sector type: -
    Boot sector info:
    Operating System: Ubuntu oneiric (development
                       branch)
    Boot files: /boot/grub/grub.cfg /etc/fstab

sda3: __________________________________________________________________________

    File system: ntfs
    Boot sector type: Windows Vista/7
    Boot sector info: No errors found in the Boot Parameter Block.
    Operating System:
    Boot files: /bootmgr /boot/bcd

sda4: __________________________________________________________________________

    File system: vfat
    Boot sector type: Unknown
    Boot sector info: No errors found in the Boot Parameter Block.
    Operating System:
    Boot files:

============================ Drive/Partition Info: =============================

Drive: sda _____________________________________________________________________

Disk /dev/sda: 320.1 GB, 320072933376 bytes
255 heads, 63 sectors/track, 38913 cylinders, total 625142448 sectors
Units = sectors of 1 * 512 = 512 bytes
Sector size (logical/physical): 512 bytes / 512 bytes

Partition Boot Start Sector End Sector # of Sectors Id System

/dev/sda1 * 2,048 409,599 407,552 7 NTFS / exFAT / HPFS
/dev/sda2 409,600 588,744,703 588,335,104 7 NTFS / exFAT / HPFS
/dev/sda3 588,744,704 624,928,767 36,184,064 7 NTFS / exFAT / HPFS
/dev/sda4 624,928,768 625,140,399 211,632 c W95 FAT32 (LBA)

"blkid" output: ________________________________________________________________

Device UUID TYPE LABEL

/dev/loop0 squashfs
/dev/sda1 FAC64C07C64BC31D ntfs SYSTEM
/dev/sda2 EAE21BB4E21B83CB ntfs
/dev/sda3 B4EA89A8EA896786 ntfs RECOVERY
/dev/sda4 DE7A-78FE vfat HP_TOOLS

================================ Mount points: =================================

Device Mount_Point Type Options

/dev/loop0 /rofs squashfs (ro,noatime)
/dev/sr0 /cdrom iso9660 (ro,noatime)

======================== sda2/Wubi/boot/grub/grub.cfg: =========================

--------------------------------------------------------------------------------
#
# DO NOT EDIT THIS FILE
#
# It is automatically generated by grub-mkconfig using templates
# from /etc/grub.d and settings from /etc/default/grub
#

### BEGIN /etc/grub.d/00_header ###
if [ -s $prefix/grubenv ]; then
  set have_grubenv=true
  load_env
fi
set default="0"
if [ "${prev_saved_entry}" ]; then
  set saved_entry="${prev_saved_entry}"
  save_env saved_entry
  set prev_saved_entry=
  save_env prev_saved_entry
  set boot_once=true
fi

function savedefault {
  if [ -z "${boot_once}" ]; then
    saved_entry="${chosen}"
    save_env saved_entry
  fi
}

function recordfail {
  set recordfail=1
  if [ -n "${have_grubenv}" ]; then if [ -z "${boot_once}" ]; then save_env recordfail; fi; fi
}

function load_video {
  insmod vbe
  insmod vga
  insmod video_bochs
  insmod video_cirrus
}

insmod part_msdos
insmod ntfs
set root='(hd0,msdos2)'
search --no-floppy --fs-uuid --set=root EAE21BB4E21B83CB
loopback loop0 /ubuntu/disks/root.disk
set root=(loop0)
if loadfont /usr/share/grub/unicode.pf2 ; then
  set gfxmode=auto
  load_video
  insmod gfxterm
  insmod part_msdos
  insmod ntfs
  set root='(hd0,msdos2)'
  search --no-floppy --fs-uuid --set=root EAE21BB4E21B83CB
  loopback loop0 /ubuntu/disks/root.disk
  set root=(loop0)
  set locale_dir=($root)/boot/grub/locale
  set lang=en_US
  insmod gettext
fi
terminal_output gfxterm
if [ "${recordfail}" = 1 ]; then
  set timeout=-1
else
  set timeout=10
fi
### END /etc/grub.d/00_header ###

### BEGIN /etc/grub.d/05_debian_theme ###
set menu_color_normal=white/black
set menu_color_highlight=black/light-gray
if background_color 44,0,30; then
  clear
fi
### END /etc/grub.d/05_debian_theme ###

### BEGIN /etc/grub.d/10_linux ###
### END /etc/grub.d/10_linux ###

### BEGIN /etc/grub.d/10_lupin ###
if [ ${recordfail} != 1 ]; then
  if [ -e ${prefix}/gfxblacklist.txt ]; then
    if hwmatch ${prefix}/gfxblacklist.txt 3; then
      if [ ${match} = 0 ]; then
        set linux_gfx_mode=keep
      else
        set linux_gfx_mode=text
      fi
    else
      set linux_gfx_mode=text
    fi
  else
    set linux_gfx_mode=keep
  fi
else
  set linux_gfx_mode=text
fi
export linux_gfx_mode
if [ "$linux_gfx_mode" != "text" ]; then load_video; fi
menuentry 'Ubuntu, with Linux 3.0.0-11-generic' --class ubuntu --class gnu-linux --class gnu --class os {
 set gfxpayload=$linux_gfx_mode
 insmod part_msdos
 insmod ntfs
 set root='(hd0,msdos2)'
 search --no-floppy --fs-uuid --set=root EAE21BB4E21B83CB
 loopback loop0 /ubuntu/disks/root.disk
 set root=(loop0)
 linux /boot/vmlinuz-3.0.0-11-generic root=UUID=EAE21BB4E21B83CB loop=/ubuntu/disks/root.disk ro quiet splash vt.handoff=7
 initrd /boot/initrd.img-3.0.0-11-generic
}
menuentry 'Ubuntu, with Linux 3.0.0-11-generic (recovery mode)' --class ubuntu --class gnu-linux --class gnu --class os {
 set gfxpayload=$linux_gfx_mode
 insmod part_msdos
 insmod ntfs
 set root='(hd0,msdos2)'
 search --no-floppy --fs-uuid --set=root EAE21BB4E21B83CB
 loopback loop0 /ubuntu/disks/root.disk
 set root=(loop0)
 echo 'Loading Linux 3.0.0-11-generic ...'
 linux /boot/vmlinuz-3.0.0-11-generic root=UUID=EAE21BB4E21B83CB loop=/ubuntu/disks/root.disk ro single
 echo 'Loading initial ramdisk ...'
 initrd /boot/initrd.img-3.0.0-11-generic
}
submenu "Previous Linux versions" {
menuentry 'Ubuntu, with Linux 2.6.38-11-generic' --class ubuntu --class gnu-linux --class gnu --class os {
 set gfxpayload=$linux_gfx_mode
 insmod part_msdos
 insmod ntfs
 set root='(hd0,msdos2)'
 search --no-floppy --fs-uuid --set=root EAE21BB4E21B83CB
 loopback loop0 /ubuntu/disks/root.disk
 set root=(loop0)
 linux /boot/vmlinuz-2.6.38-11-generic root=UUID=EAE21BB4E21B83CB loop=/ubuntu/disks/root.disk ro quiet splash vt.handoff=7
 initrd /boot/initrd.img-2.6.38-11-generic
}
menuentry 'Ubuntu, with Linux 2.6.38-11-generic (recovery mode)' --class ubuntu --class gnu-linux --class gnu --class os {
 set gfxpayload=$linux_gfx_mode
 insmod part_msdos
 insmod ntfs
 set root='(hd0,msdos2)'
 search --no-floppy --fs-uuid --set=root EAE21BB4E21B83CB
 loopback loop0 /ubuntu/disks/root.disk
 set root=(loop0)
 echo 'Loading Linux 2.6.38-11-generic ...'
 linux /boot/vmlinuz-2.6.38-11-generic root=UUID=EAE21BB4E21B83CB loop=/ubuntu/disks/root.disk ro single
 echo 'Loading initial ramdisk ...'
 initrd /boot/initrd.img-2.6.38-11-generic
}
menuentry 'Ubuntu, with Linux 2.6.38-8-generic' --class ubuntu --class gnu-linux --class gnu --class os {
 set gfxpayload=$linux_gfx_mode
 insmod part_msdos
 insmod ntfs
 set root='(hd0,msdos2)'
 search --no-floppy --fs-uuid --set=root EAE21BB4E21B83CB
 loopback loop0 /ubuntu/disks/root.disk
 set root=(loop0)
 linux /boot/vmlinuz-2.6.38-8-generic root=UUID=EAE21BB4E21B83CB loop=/ubuntu/disks/root.disk ro quiet splash vt.handoff=7
 initrd /boot/initrd.img-2.6.38-8-generic
}
menuentry 'Ubuntu, with Linux 2.6.38-8-generic (recovery mode)' --class ubuntu --class gnu-linux --class gnu --class os {
 set gfxpayload=$linux_gfx_mode
 insmod part_msdos
 insmod ntfs
 set root='(hd0,msdos2)'
 search --no-floppy --fs-uuid --set=root EAE21BB4E21B83CB
 loopback loop0 /ubuntu/disks/root.disk
 set root=(loop0)
 echo 'Loading Linux 2.6.38-8-generic ...'
 linux /boot/vmlinuz-2.6.38-8-generic root=UUID=EAE21BB4E21B83CB loop=/ubuntu/disks/root.disk ro single
 echo 'Loading initial ramdisk ...'
 initrd /boot/initrd.img-2.6.38-8-generic
}
}
### END /etc/grub.d/10_lupin ###

### BEGIN /etc/grub.d/20_linux_xen ###
### END /etc/grub.d/20_linux_xen ###

### BEGIN /etc/grub.d/20_memtest86+ ###
### END /etc/grub.d/20_memtest86+ ###

### BEGIN /etc/grub.d/30_os-prober ###
if [ "x${timeout}" != "x-1" ]; then
  if keystatus; then
    if keystatus --shift; then
      set timeout=-1
    else
      set timeout=0
    fi
  else
    if sleep --interruptible 3 ; then
      set timeout=0
    fi
  fi
fi
### END /etc/grub.d/30_os-prober ###

### BEGIN /etc/grub.d/40_custom ###
# This file provides an easy way to add custom menu entries. Simply type the
# menu entries you want to add after this comment. Be careful not to change
# the 'exec tail' line above.
### END /etc/grub.d/40_custom ###

### BEGIN /etc/grub.d/41_custom ###
if [ -f $prefix/custom.cfg ]; then
  source $prefix/custom.cfg;
fi
### END /etc/grub.d/41_custom ###
--------------------------------------------------------------------------------

============================= sda2/Wubi/etc/fstab: =============================

--------------------------------------------------------------------------------
# /etc/fstab: static file system information.
#
# Use 'blkid -o value -s UUID' to print the universally unique identifier
# for a device; this may be used with UUID= as a more robust way to name
# devices that works even if disks are added and removed. See fstab(5).
#
# <file system> <mount point> <type> <options> <dump> <pass>
proc /proc proc nodev,noexec,nosuid 0 0
/host/ubuntu/disks/root.disk / ext4 loop,errors=remount-ro 0 1
/host/ubuntu/disks/swap.disk none swap loop,sw 0 0
--------------------------------------------------------------------------------

================= sda2/Wubi: Location of files loaded by Grub: =================

           GiB - GB File Fragment(s)

  22.130485535 = 23.762427904 boot/grub/grub.cfg 1
  21.005889893 = 22.554902528 boot/initrd.img-2.6.38-11-generic 2
  21.191955566 = 22.754689024 boot/initrd.img-2.6.38-8-generic 1
   3.634677887 = 3.902705664 boot/initrd.img-3.0.0-11-generic 2
   1.043281555 = 1.120215040 boot/vmlinuz-2.6.38-11-generic 1
   0.387027740 = 0.415567872 boot/vmlinuz-2.6.38-8-generic 1
  19.844184875 = 21.307531264 boot/vmlinuz-3.0.0-11-generic 1
  21.005889893 = 22.554902528 initrd.img.old 2
  19.844184875 = 21.307531264 vmlinuz 1
   1.043281555 = 1.120215040 vmlinuz.old 1

======================== Unknown MBRs/Boot Sectors/etc: ========================

Unknown BootLoader on sda4

00000000 eb 58 90 4d 53 44 4f 53 35 2e 30 00 02 02 ca 19 |.X.MSDOS5.0.....|
00000010 02 00 00 00 00 f8 00 00 3f 00 ff 00 00 a8 3f 25 |........?.....?%|
00000020 b0 3a 03 00 1b 03 00 00 00 00 00 00 02 00 00 00 |.:..............|
00000030 01 00 06 00 00 00 00 00 00 00 00 00 00 00 00 00 |................|
00000040 80 00 29 fe 78 7a de 4e 4f 20 4e 41 4d 45 20 20 |..).xz.NO NAME |
00000050 20 20 46 41 54 33 32 20 20 20 33 c9 8e d1 bc f4 | FAT32 3.....|
00000060 7b 8e c1 8e d9 bd 00 7c 88 4e 02 8a 56 40 b4 41 |{......|.N..V@.A|
00000070 bb aa 55 cd 13 72 10 81 fb 55 aa 75 0a f6 c1 01 |..U..r...U.u....|
00000080 74 05 fe 46 02 eb 2d 8a 56 40 b4 08 cd 13 73 05 |t..F..-.V@....s.|
00000090 b9 ff ff 8a f1 66 0f b6 c6 40 66 0f b6 d1 80 e2 |.....f...@f.....|
000000a0 3f f7 e2 86 cd c0 ed 06 41 66 0f b7 c9 66 f7 e1 |?.......Af...f..|
000000b0 66 89 46 f8 83 7e 16 00 75 38 83 7e 2a 00 77 32 |f.F..~..u8.~*.w2|
000000c0 66 8b 46 1c 66 83 c0 0c bb 00 80 b9 01 00 e8 2b |f.F.f..........+|
000000d0 00 e9 2c 03 a0 fa 7d b4 7d 8b f0 ac 84 c0 74 17 |..,...}.}.....t.|
000000e0 3c ff 74 09 b4 0e bb 07 00 cd 10 eb ee a0 fb 7d |<.t............}|
000000f0 eb e5 a0 f9 7d eb e0 98 cd 16 cd 19 66 60 80 7e |....}.......f`.~|
00000100 02 00 0f 84 20 00 66 6a 00 66 50 06 53 66 68 10 |.... .fj.fP.Sfh.|
00000110 00 01 00 b4 42 8a 56 40 8b f4 cd 13 66 58 66 58 |....B.V@....fXfX|
00000120 66 58 66 58 eb 33 66 3b 46 f8 72 03 f9 eb 2a 66 |fXfX.3f;F.r...*f|
00000130 33 d2 66 0f b7 4e 18 66 f7 f1 fe c2 8a ca 66 8b |3.f..N.f......f.|
00000140 d0 66 c1 ea 10 f7 76 1a 86 d6 8a 56 40 8a e8 c0 |.f....v....V@...|
00000150 e4 06 0a cc b8 01 02 cd 13 66 61 0f 82 75 ff 81 |.........fa..u..|
00000160 c3 00 02 66 40 49 75 94 c3 42 4f 4f 54 4d 47 52 |...<email address hidden>|
00000170 20 20 20 20 00 00 00 00 00 00 00 00 00 00 00 00 | ............|
00000180 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 |................|
*
000001a0 00 00 00 00 00 00 00 00 00 00 00 00 0d 0a 52 65 |..............Re|
000001b0 6d 6f 76 65 20 64 69 73 6b 73 20 6f 72 20 6f 74 |move disks or ot|
000001c0 68 65 72 20 6d 65 64 69 61 2e ff 0d 0a 44 69 73 |her media....Dis|
000001d0 6b 20 65 72 72 6f 72 ff 0d 0a 50 72 65 73 73 20 |k error...Press |
000001e0 61 6e 79 20 6b 65 79 20 74 6f 20 72 65 73 74 61 |any key to resta|
000001f0 72 74 0d 0a 00 00 00 00 00 ac cb d8 00 00 55 aa |rt............U.|
00000200

I tried the shift option and found that I can get to recovery grub option. It told me that windows was probably not shutdown right, even though utility partition programs told me partitions were clean. I will boot into windows 7 and try chkdsk /r and see what happens

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