ecopcr binary package in Ubuntu Jammy amd64

 DNA barcoding is a tool for characterizing the species origin using a
 short sequence from a standard position and agreed upon position in the
 genome. To be used as a DNA barcode, a genome locus should vary among
 individuals of the same species only to a minor degree and it should
 vary among species very quickly. From a practical point of view, a
 barcode locus should be flanked by two conserved regions to design PCR
 primers. Several manually discovered barcode loci like COI, rbcL, 18S,
 16S and 23S rDNA, or trnH-ps are routinely used today, but no objective
 function has been described to measure their quality in terms of
 universality (barcode coverage, Bc ) or in terms of taxonomical
 discrimination capacity (barcode specificity, Bs ).
 .
 ecoPCR is an electronic PCR software developed by LECA and
 Helix-Project. It helps to estimate Barcode primers quality. In
 conjunction with OBITools you can postprocess ecoPCR output to compute
 barcode coverage and barcode specificity. New barcode primers can be
 developed using the ecoPrimers software

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2022-02-04 02:09:01 UTC Published Ubuntu Jammy amd64 release universe science Optional 1.0.1+dfsg-4
  • Published
  • Copied from ubuntu jammy-proposed amd64 in Primary Archive for Ubuntu
  Deleted Ubuntu Jammy amd64 proposed universe science Optional 1.0.1+dfsg-4
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to jammy

  • Published
  2022-02-04 02:09:26 UTC Superseded Ubuntu Jammy amd64 release universe science Optional 1.0.1+dfsg-3
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of ecopcr 1.0.1+dfsg-4 in ubuntu jammy PROPOSED
  • Published
  • Copied from ubuntu jammy-proposed amd64 in Primary Archive for Ubuntu
  2022-02-05 06:10:08 UTC Deleted Ubuntu Jammy amd64 proposed universe science Optional 1.0.1+dfsg-3
  • Removed from disk .
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to jammy

  • Published
  2021-10-21 12:25:46 UTC Superseded Ubuntu Jammy amd64 release universe science Optional 1.0.1+dfsg-2
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of ecopcr 1.0.1+dfsg-3 in ubuntu jammy PROPOSED
  • Published
  • Copied from ubuntu hirsute-proposed amd64 in Primary Archive for Ubuntu

Source package