Binary package “zalign” in ubuntu bionic
parallel local alignment of biological sequences
zAlign is a local sequence aligner, especially intended for use with
large biological DNA sequences, with more than 1Mbp (Millions of base
pairs). It uses the Smith-Waterman exact algorithm with affine gap cost
function to perform this task.
.
zAlign can be used both in distributed (clusters, for
example) or standalone environments. Currently it has
been tested on Linux and Sun Solaris, using both the MPICH
(http://
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environments are highly considered.
Source package
Published versions
- zalign 0.9.1-3 in amd64 (Proposed)
- zalign 0.9.1-3 in amd64 (Release)
- zalign 0.9.1-3 in arm64 (Proposed)
- zalign 0.9.1-3 in arm64 (Release)
- zalign 0.9.1-3 in armhf (Proposed)
- zalign 0.9.1-3 in armhf (Release)
- zalign 0.9.1-3 in i386 (Proposed)
- zalign 0.9.1-3 in i386 (Release)
- zalign 0.9.1-3 in ppc64el (Proposed)
- zalign 0.9.1-3 in ppc64el (Release)
- zalign 0.9.1-3 in s390x (Proposed)
- zalign 0.9.1-3 in s390x (Release)