So, I've now created an updated bedtools package for jammy (having patched the bundled htslib with 515f6df-Remove-compressBound-assertions.-PR-1258.patch) for jammy,
and since the zlib package received some CVE patches meanwhile, I also created a new patched zlib version (that incl. 410-lp1961427.patch) for jammy.
@Ilya would you mind trying this combination on a z15 running jammy?
Meanwhile I will also look at the stand-alone htslib (and wonder how often htslib might be bundled somewhere else too ...)
Once I get your okay, I will restart this work, by patching kinetic first and then going down the road ... (and reaching out to the maintainer of the Debian packages, too).
So, I've now created an updated bedtools package for jammy (having patched the bundled htslib with 515f6df- Remove- compressBound- assertions. -PR-1258. patch) for jammy, patch) for jammy.
and since the zlib package received some CVE patches meanwhile, I also created a new patched zlib version (that incl. 410-lp1961427.
@Ilya would you mind trying this combination on a z15 running jammy?
Meanwhile I will also look at the stand-alone htslib (and wonder how often htslib might be bundled somewhere else too ...)
Once I get your okay, I will restart this work, by patching kinetic first and then going down the road ... (and reaching out to the maintainer of the Debian packages, too).