No segmentation in menus

Asked by Juan Ygnacio López Hernández

Binary package hint: saga

Hello.
I would like to apply segmentation in SAGA, but is not present in menu.
I selected the win version of modules/imagery_segmentation.dll and failed.
Are there another website or ppa source to install?
I ignore where are the modules of linux version in my system.
What else should I do?

I am ussing Ubuntu 10.04 LTS and Saga 2.0.6.

Regards.

Question information

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Ubuntu saga Edit question
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This question was originally filed as bug #734174.

Revision history for this message
Johan Van de Wauw (johanvdw) said :
#1

I suppose you use the version from my ppa.
https://launchpad.net/~johanvdw/+archive/sagacvs

In that case, the module should be present: modules\imagery\segmentation

If for some reason it is not present, try opening from /usr/lib/saga ( I recommend selecting all files in that directory, than you will have all modules).

If you manage to fix your problem, please report how - I am not sure why you don't see the module.

If the problem remains, please provide the exact version of saga you are using (in a terminal):
dpkg -s saga
and perhaps the output of the following command:
saga_cmd libimagery_segmentation

Revision history for this message
Juan Ygnacio López Hernández (cubarro) said :
#2

Thank you for your fast answer!

Yes I changed from UbuntuGis ppa to yours, because your one have the newest
version of SAGA.

I followed the instructions you sent and now there are more modules in my
SAGA Gis. Only that I did not new were are located the modules folder.

The output of the order to adding all the modules is this:
==============
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libshapes_grid.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libio_table.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libshapes_lines.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libpj_proj4.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/librecreations_fractals.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/libgeostatistics_kriging.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/librecreations_games.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libio_grid.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libta_profiles.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/libta_morphometry.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/libta_preprocessor.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libio_shapes.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libgrid_filter.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libgrid_calculus.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libshapes_points.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libgrid_spline.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libtable_tools.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libta_lighting.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/libpointcloud_viewer.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/libsim_cellular_automata.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libgrid_analysis.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libio_grid_grib2.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libgrid_tools.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/libgeostatistics_grid.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libio_esri_e00.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libta_channels.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libio_shapes_dxf.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/liblectures_introduction.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libsim_hydrology.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libio_grid_image.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/libgrid_calculus_bsl.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libihacres.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/libsim_ecosystems_hugget.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libio_odbc.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/libgrid_visualisation.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libtin_tools.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libtransect.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libshapes_tools.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/libpointcloud_tools.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/libgeostatistics_regression.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/libcontrib_a_perego.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libta_hydrology.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/libshapes_polygons.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/libgeostatistics_points.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libio_gps.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libgrid_gridding.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/libpj_georeference.so...okay
[2011-03-13/19:26:45] Load library: /usr/lib/saga/libio_gdal.so...okay
[2011-03-13/19:26:45] Load library:
/usr/lib/saga/libtable_calculus.so...okay

[2011-03-13/19:32:27] Load library:
/usr/lib/saga/libcontrib_a_perego.so...has already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libdocs_html.so...okay
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libdocs_pdf.so...okay
[2011-03-13/19:32:27] Load library:
/usr/lib/saga/libgeostatistics_grid.so...has already been loaded
[2011-03-13/19:32:27] Load library:
/usr/lib/saga/libgeostatistics_kriging.so...has already been loaded
[2011-03-13/19:32:27] Load library:
/usr/lib/saga/libgeostatistics_points.so...has already been loaded
[2011-03-13/19:32:27] Load library:
/usr/lib/saga/libgeostatistics_regression.so...has already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libgrid_analysis.so...has
already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libgrid_calculus.so...has
already been loaded
[2011-03-13/19:32:27] Load library:
/usr/lib/saga/libgrid_calculus_bsl.so...has already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libgrid_filter.so...has
already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libgrid_gridding.so...has
already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libgrid_spline.so...has
already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libgrid_tools.so...has
already been loaded
[2011-03-13/19:32:27] Load library:
/usr/lib/saga/libgrid_visualisation.so...has already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libihacres.so...has
already been loaded
[2011-03-13/19:32:27] Load library:
/usr/lib/saga/libimagery_classification.so...okay
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libimagery_rga.so...okay
[2011-03-13/19:32:27] Load library:
/usr/lib/saga/libimagery_segmentation.so...okay
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libimagery_tools.so...okay
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libio_esri_e00.so...has
already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libio_gdal.so...has
already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libio_gps.so...has already
been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libio_grid.so...has
already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libio_grid_grib2.so...has
already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libio_grid_image.so...has
already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libio_odbc.so...has
already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libio_shapes.so...has
already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libio_shapes_dxf.so...has
already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libio_shapes_las.so...okay
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libio_table.so...has
already been loaded
[2011-03-13/19:32:27] Load library:
/usr/lib/saga/liblectures_introduction.so...has already been loaded
[2011-03-13/19:32:27] Load library: /usr/lib/saga/libopencv.so...okay
[2011-03-13/19:32:28] Load library:
/usr/lib/saga/libpj_georeference.so...has already been loaded
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libpj_proj4.so...has
already been loaded
[2011-03-13/19:32:28] Load library:
/usr/lib/saga/libpointcloud_tools.so...has already been loaded
[2011-03-13/19:32:28] Load library:
/usr/lib/saga/libpointcloud_viewer.so...has already been loaded
[2011-03-13/19:32:28] Load library:
/usr/lib/saga/librecreations_fractals.so...has already been loaded
[2011-03-13/19:32:28] Load library:
/usr/lib/saga/librecreations_games.so...has already been loaded
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libshapes_grid.so...has
already been loaded
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libshapes_lines.so...has
already been loaded
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libshapes_points.so...has
already been loaded
[2011-03-13/19:32:28] Load library:
/usr/lib/saga/libshapes_polygons.so...has already been loaded
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libshapes_tools.so...has
already been loaded
[2011-03-13/19:32:28] Load library:
/usr/lib/saga/libsim_cellular_automata.so...has already been loaded
[2011-03-13/19:32:28] Load library:
/usr/lib/saga/libsim_ecosystems_hugget.so...has already been loaded
[2011-03-13/19:32:28] Load library:
/usr/lib/saga/libsim_fire_spreading.so...okay
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libsim_hydrology.so...has
already been loaded
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libtable_calculus.so...has
already been loaded
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libtable_tools.so...has
already been loaded
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libta_channels.so...has
already been loaded
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libta_hydrology.so...has
already been loaded
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libta_lighting.so...has
already been loaded
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libta_morphometry.so...has
already been loaded
[2011-03-13/19:32:28] Load library:
/usr/lib/saga/libta_preprocessor.so...has already been loaded
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libta_profiles.so...has
already been loaded
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libtin_tools.so...has
already been loaded
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libtin_viewer.so...okay
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libtransect.so...has
already been loaded
[2011-03-13/19:32:28] Load library: /usr/lib/saga/libvigra.so...okay
==============

Thank you again. The bug is already solved.

Regards.

Juan

Juan Ygnacio LÓPEZ
HERNÁNDEZ<http://portal.uni-freiburg.de/felis/abteilung-en/mitarbeiter/Lopez>
Doktorand
 <http://portal.uni-freiburg.de/felis/>Felis<http://portal.uni-freiburg.de/felis/>.
University <http://www.uni-freiburg.de/> of
Freiburg<http://www.uni-freiburg.de/>
Tennenbacherstr. 4
D-79106 Freiburg
Tel. ++49-(0)761-203-3699

2011/3/13 Johan Van de Wauw <email address hidden>

> I suppose you use the version from my ppa.
> https://launchpad.net/~johanvdw/+archive/sagacvs<https://launchpad.net/%7Ejohanvdw/+archive/sagacvs>
>
> In that case, the module should be present: modules\imagery\segmentation
>
> If for some reason it is not present, try opening from /usr/lib/saga ( I
> recommend selecting all files in that directory, than you will have all
> modules).
>
> If you manage to fix your problem, please report how - I am not sure why
> you don't see the module.
>
> If the problem remains, please provide the exact version of saga you are
> using (in a terminal):
> dpkg -s saga
> and perhaps the output of the following command:
> saga_cmd libimagery_segmentation
>
>
> ** Changed in: saga (Ubuntu)
> Assignee: (unassigned) => Johan Van de Wauw (johanvdw)
>
> --
> You received this bug notification because you are a direct subscriber
> of the bug.
> https://bugs.launchpad.net/bugs/734174
>
> Title:
> No segmentation in menus
>
> Status in “saga” package in Ubuntu:
> New
>
> Bug description:
> Binary package hint: saga
>
> Hello.
> I would like to apply segmentation in SAGA, but is not present in menu.
> I selected the win version of modules/imagery_segmentation.dll and failed.
> Are there another website or ppa source to install?
> I ignore where are the modules of linux version in my system.
> What else should I do?
>
> I am ussing Ubuntu 10.04 LTS and Saga 2.0.6.
>
> Regards.
>
> To unsubscribe from this bug, go to:
> https://bugs.launchpad.net/ubuntu/+source/saga/+bug/734174/+subscribe
>

Revision history for this message
Johan Van de Wauw (johanvdw) said :
#3

Not really a bug, but other people may face a similar problem, so useful to keep as a question.

Revision history for this message
Johan Van de Wauw (johanvdw) said :
#4

The question was already answered in my first comment.
This problem arises when saga is updated from version 2.0.5 to a newer version, or inbetween updates of the svn builds.
In that case, the file .SAGA in the home directory is loaded which does not contain links to the new modules. Removing that file, or reloading all modules will show the new modules in the menu.

I'll check upstream if it would be possible to add the feature to recheck modules automatically if a new version is installed.

Can you help with this problem?

Provide an answer of your own, or ask Juan Ygnacio López Hernández for more information if necessary.

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