https://launchpad.net/ubuntu/+source/prank/0.0.170427+dfsg-2build1/+build/19109320 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux riscv64-qemu-lcy01-071 5.4.0-21-generic #25-Ubuntu SMP Tue Mar 31 01:57:06 UTC 2020 riscv64 Buildd toolchain package versions: launchpad-buildd_188 python-lpbuildd_188 sbuild_0.79.0-1ubuntu1 git_1:2.25.1-1ubuntu1 dpkg-dev_1.19.7ubuntu2 python-debian_0.1.36build1. Syncing the system clock with the buildd NTP service... 3 Apr 14:49:14 ntpdate[253464]: adjust time server 10.211.37.1 offset 0.000386 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=focal --arch=riscv64 PACKAGEBUILD-19109320 --image-type chroot /home/buildd/filecache-default/88ad86cb2b525f1abddded96eadf8014548f7845 Creating target for build PACKAGEBUILD-19109320 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=focal --arch=riscv64 PACKAGEBUILD-19109320 Starting target for build PACKAGEBUILD-19109320 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=focal --arch=riscv64 PACKAGEBUILD-19109320 'deb http://ftpmaster.internal/ubuntu focal main universe' Overriding sources.list in build-PACKAGEBUILD-19109320 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=focal --arch=riscv64 PACKAGEBUILD-19109320 Updating target for build PACKAGEBUILD-19109320 Ign:1 http://archive-team.internal/bootstrap/riscv64 focal InRelease Get:2 http://ftpmaster.internal/ubuntu focal InRelease [265 kB] Get:3 http://archive-team.internal/bootstrap/riscv64 focal Release [757 B] Ign:4 http://archive-team.internal/bootstrap/riscv64 focal Release.gpg Get:5 http://ftpmaster.internal/ubuntu focal-proposed InRelease [265 kB] Get:6 http://archive-team.internal/bootstrap/riscv64 focal/main riscv64 Packages [997 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main riscv64 Packages [670 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main Translation-en [501 kB] Get:9 http://ftpmaster.internal/ubuntu focal/universe riscv64 Packages [5042 kB] Get:10 http://ftpmaster.internal/ubuntu focal/universe Translation-en [5127 kB] Get:11 http://ftpmaster.internal/ubuntu focal-proposed/main riscv64 Packages [18.6 kB] Get:12 http://ftpmaster.internal/ubuntu focal-proposed/main Translation-en [17.3 kB] Get:13 http://ftpmaster.internal/ubuntu focal-proposed/universe riscv64 Packages [83.3 kB] Get:14 http://ftpmaster.internal/ubuntu focal-proposed/universe Translation-en [92.5 kB] Fetched 13.1 MB in 20s (649 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: coreutils liblocale-gettext-perl libperl5.30 libtext-charwidth-perl libtext-iconv-perl perl-base 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 6037 kB of archives. After this operation, 6144 B of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu focal/main riscv64 coreutils riscv64 8.30-3ubuntu2 [1158 kB] Get:2 http://ftpmaster.internal/ubuntu focal/main riscv64 perl-base riscv64 5.30.0-9build1 [1419 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main riscv64 liblocale-gettext-perl riscv64 1.07-4 [16.5 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main riscv64 libtext-charwidth-perl riscv64 0.04-10 [9460 B] Get:5 http://ftpmaster.internal/ubuntu focal/main riscv64 libtext-iconv-perl riscv64 1.7-7 [13.2 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main riscv64 libperl5.30 riscv64 5.30.0-9build1 [3422 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6037 kB in 1s (4862 kB/s) (Reading database ... 9818 files and directories currently installed.) Preparing to unpack .../coreutils_8.30-3ubuntu2_riscv64.deb ... Unpacking coreutils (8.30-3ubuntu2) over (8.30-3ubuntu2) ... Setting up coreutils (8.30-3ubuntu2) ... (Reading database ... 9818 files and directories currently installed.) Preparing to unpack .../perl-base_5.30.0-9build1_riscv64.deb ... Unpacking perl-base (5.30.0-9build1) over (5.30.0-9build1) ... Setting up perl-base (5.30.0-9build1) ... (Reading database ... 9818 files and directories currently installed.) Preparing to unpack .../liblocale-gettext-perl_1.07-4_riscv64.deb ... Unpacking liblocale-gettext-perl (1.07-4) over (1.07-4) ... Preparing to unpack .../libtext-charwidth-perl_0.04-10_riscv64.deb ... Unpacking libtext-charwidth-perl (0.04-10) over (0.04-10) ... Preparing to unpack .../libtext-iconv-perl_1.7-7_riscv64.deb ... Unpacking libtext-iconv-perl (1.7-7) over (1.7-7) ... Preparing to unpack .../libperl5.30_5.30.0-9build1_riscv64.deb ... Unpacking libperl5.30:riscv64 (5.30.0-9build1) over (5.30.0-9build1) ... Setting up libtext-iconv-perl (1.7-7) ... Setting up libtext-charwidth-perl (0.04-10) ... Setting up libperl5.30:riscv64 (5.30.0-9build1) ... Setting up liblocale-gettext-perl (1.07-4) ... Processing triggers for libc-bin (2.31-0ubuntu6~riscv64.1) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-19109320 riscv64 focal -c chroot:build-PACKAGEBUILD-19109320 --arch=riscv64 --dist=focal --nolog prank_0.0.170427+dfsg-2build1.dsc Initiating build PACKAGEBUILD-19109320 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 5.4.0-21-generic #25-Ubuntu SMP Tue Mar 31 01:57:06 UTC 2020 riscv64 sbuild (Debian sbuild) 0.79.0 (05 February 2020) on riscv64-qemu-lcy01-071 +==============================================================================+ | prank 0.0.170427+dfsg-2build1 (riscv64) Fri, 03 Apr 2020 14:52:54 +0000 | +==============================================================================+ Package: prank Version: 0.0.170427+dfsg-2build1 Source Version: 0.0.170427+dfsg-2build1 Distribution: focal Machine Architecture: riscv64 Host Architecture: riscv64 Build Architecture: riscv64 Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-19109320/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/prank-hh8Q8J/resolver-bJ3w4y' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- prank_0.0.170427+dfsg-2build1.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/prank-hh8Q8J/prank-0.0.170427+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/prank-hh8Q8J' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 11~), build-essential, fakeroot Filtered Build-Depends: debhelper (>= 11~), build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [367 B] Get:5 copy:/<>/apt_archive ./ Packages [452 B] Fetched 1776 B in 1s (3107 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libgpm2 Use 'apt autoremove' to remove it. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3 libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu66 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf tzdata Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3 libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu66 libmagic-mgc libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db po-debconf sbuild-build-depends-main-dummy tzdata 0 upgraded, 35 newly installed, 0 to remove and 0 not upgraded. Need to get 17.0 MB of archives. After this operation, 67.6 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [876 B] Get:2 http://ftpmaster.internal/ubuntu focal/main riscv64 libbsd0 riscv64 0.10.0-1 [42.0 kB] Get:3 http://archive-team.internal/bootstrap/riscv64 focal/main riscv64 libglib2.0-0 riscv64 2.64.1-1 [1125 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main riscv64 bsdmainutils riscv64 11.1.2ubuntu3 [176 kB] Get:5 http://ftpmaster.internal/ubuntu focal-proposed/main riscv64 libuchardet0 riscv64 0.0.6-3build1 [64.9 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main riscv64 groff-base riscv64 1.22.4-4build1 [816 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main riscv64 libpipeline1 riscv64 1.5.2-2build1 [23.9 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main riscv64 man-db riscv64 2.9.1-1 [1075 kB] Get:9 http://archive-team.internal/bootstrap/riscv64 focal/main riscv64 dwz riscv64 0.13-5 [147 kB] Get:10 http://ftpmaster.internal/ubuntu focal/main riscv64 libmagic-mgc riscv64 1:5.38-4 [218 kB] Get:11 http://ftpmaster.internal/ubuntu focal/main riscv64 libmagic1 riscv64 1:5.38-4 [70.5 kB] Get:12 http://ftpmaster.internal/ubuntu focal/main riscv64 file riscv64 1:5.38-4 [22.5 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main riscv64 libelf1 riscv64 0.176-1.1build1 [41.8 kB] Get:14 http://ftpmaster.internal/ubuntu focal/main riscv64 tzdata all 2019c-3ubuntu1 [294 kB] Get:15 http://ftpmaster.internal/ubuntu focal/main riscv64 libicu66 riscv64 66.1-2ubuntu2 [8406 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main riscv64 libxml2 riscv64 2.9.10+dfsg-4build1 [558 kB] Get:17 http://ftpmaster.internal/ubuntu focal/main riscv64 gettext-base riscv64 0.19.8.1-10build1 [47.4 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main riscv64 libsigsegv2 riscv64 2.12-2 [13.0 kB] Get:19 http://ftpmaster.internal/ubuntu focal/main riscv64 m4 riscv64 1.4.18-4 [188 kB] Get:20 http://ftpmaster.internal/ubuntu focal/main riscv64 autoconf all 2.69-11.1 [321 kB] Get:21 http://ftpmaster.internal/ubuntu focal/main riscv64 autotools-dev all 20180224.1 [39.6 kB] Get:22 http://ftpmaster.internal/ubuntu focal/main riscv64 automake all 1:1.16.1-4ubuntu6 [522 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main riscv64 autopoint all 0.19.8.1-10build1 [412 kB] Get:24 http://ftpmaster.internal/ubuntu focal/main riscv64 libtool all 2.4.6-13 [161 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main riscv64 dh-autoreconf all 19 [16.1 kB] Get:26 http://ftpmaster.internal/ubuntu focal-proposed/main riscv64 libdebhelper-perl all 12.10ubuntu1 [62.1 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main riscv64 libarchive-zip-perl all 1.67-2 [90.5 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main riscv64 libsub-override-perl all 0.09-2 [9532 B] Get:29 http://ftpmaster.internal/ubuntu focal/main riscv64 libfile-stripnondeterminism-perl all 1.6.3-2 [16.0 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main riscv64 dh-strip-nondeterminism all 1.6.3-2 [5228 B] Get:31 http://ftpmaster.internal/ubuntu focal/main riscv64 libcroco3 riscv64 0.6.13-1 [71.1 kB] Get:32 http://ftpmaster.internal/ubuntu focal/main riscv64 gettext riscv64 0.19.8.1-10build1 [844 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main riscv64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:34 http://ftpmaster.internal/ubuntu focal/main riscv64 po-debconf all 1.0.21 [233 kB] Get:35 http://ftpmaster.internal/ubuntu focal-proposed/main riscv64 debhelper all 12.10ubuntu1 [877 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 17.0 MB in 3s (4897 kB/s) Selecting previously unselected package libbsd0:riscv64. (Reading database ... 9818 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_riscv64.deb ... Unpacking libbsd0:riscv64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2ubuntu3_riscv64.deb ... Unpacking bsdmainutils (11.1.2ubuntu3) ... Selecting previously unselected package libuchardet0:riscv64. Preparing to unpack .../02-libuchardet0_0.0.6-3build1_riscv64.deb ... Unpacking libuchardet0:riscv64 (0.0.6-3build1) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-4build1_riscv64.deb ... Unpacking groff-base (1.22.4-4build1) ... Selecting previously unselected package libpipeline1:riscv64. Preparing to unpack .../04-libpipeline1_1.5.2-2build1_riscv64.deb ... Unpacking libpipeline1:riscv64 (1.5.2-2build1) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.9.1-1_riscv64.deb ... Unpacking man-db (2.9.1-1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.38-4_riscv64.deb ... Unpacking libmagic-mgc (1:5.38-4) ... Selecting previously unselected package libmagic1:riscv64. Preparing to unpack .../07-libmagic1_1%3a5.38-4_riscv64.deb ... Unpacking libmagic1:riscv64 (1:5.38-4) ... Selecting previously unselected package file. Preparing to unpack .../08-file_1%3a5.38-4_riscv64.deb ... Unpacking file (1:5.38-4) ... Selecting previously unselected package libelf1:riscv64. Preparing to unpack .../09-libelf1_0.176-1.1build1_riscv64.deb ... Unpacking libelf1:riscv64 (0.176-1.1build1) ... Selecting previously unselected package libglib2.0-0:riscv64. Preparing to unpack .../10-libglib2.0-0_2.64.1-1_riscv64.deb ... Unpacking libglib2.0-0:riscv64 (2.64.1-1) ... Selecting previously unselected package tzdata. Preparing to unpack .../11-tzdata_2019c-3ubuntu1_all.deb ... Unpacking tzdata (2019c-3ubuntu1) ... Selecting previously unselected package libicu66:riscv64. Preparing to unpack .../12-libicu66_66.1-2ubuntu2_riscv64.deb ... Unpacking libicu66:riscv64 (66.1-2ubuntu2) ... Selecting previously unselected package libxml2:riscv64. Preparing to unpack .../13-libxml2_2.9.10+dfsg-4build1_riscv64.deb ... Unpacking libxml2:riscv64 (2.9.10+dfsg-4build1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../14-gettext-base_0.19.8.1-10build1_riscv64.deb ... Unpacking gettext-base (0.19.8.1-10build1) ... Selecting previously unselected package libsigsegv2:riscv64. Preparing to unpack .../15-libsigsegv2_2.12-2_riscv64.deb ... Unpacking libsigsegv2:riscv64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../16-m4_1.4.18-4_riscv64.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../17-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../18-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../19-automake_1%3a1.16.1-4ubuntu6_all.deb ... Unpacking automake (1:1.16.1-4ubuntu6) ... Selecting previously unselected package autopoint. Preparing to unpack .../20-autopoint_0.19.8.1-10build1_all.deb ... Unpacking autopoint (0.19.8.1-10build1) ... Selecting previously unselected package libtool. Preparing to unpack .../21-libtool_2.4.6-13_all.deb ... Unpacking libtool (2.4.6-13) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../22-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../23-libdebhelper-perl_12.10ubuntu1_all.deb ... Unpacking libdebhelper-perl (12.10ubuntu1) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../24-libarchive-zip-perl_1.67-2_all.deb ... Unpacking libarchive-zip-perl (1.67-2) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../25-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../26-libfile-stripnondeterminism-perl_1.6.3-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.6.3-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../27-dh-strip-nondeterminism_1.6.3-2_all.deb ... Unpacking dh-strip-nondeterminism (1.6.3-2) ... Selecting previously unselected package dwz. Preparing to unpack .../28-dwz_0.13-5_riscv64.deb ... Unpacking dwz (0.13-5) ... Selecting previously unselected package libcroco3:riscv64. Preparing to unpack .../29-libcroco3_0.6.13-1_riscv64.deb ... Unpacking libcroco3:riscv64 (0.6.13-1) ... Selecting previously unselected package gettext. Preparing to unpack .../30-gettext_0.19.8.1-10build1_riscv64.deb ... Unpacking gettext (0.19.8.1-10build1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../31-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../32-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../33-debhelper_12.10ubuntu1_all.deb ... Unpacking debhelper (12.10ubuntu1) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../34-sbuild-build-depends-main-dummy_0.invalid.0_riscv64.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up libpipeline1:riscv64 (1.5.2-2build1) ... Setting up libmagic-mgc (1:5.38-4) ... Setting up libarchive-zip-perl (1.67-2) ... Setting up libglib2.0-0:riscv64 (2.64.1-1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (12.10ubuntu1) ... Setting up libmagic1:riscv64 (1:5.38-4) ... Setting up gettext-base (0.19.8.1-10build1) ... Setting up file (1:5.38-4) ... Setting up tzdata (2019c-3ubuntu1) ... Current default time zone: 'Etc/UTC' Local time is now: Fri Apr 3 14:54:49 UTC 2020. Universal Time is now: Fri Apr 3 14:54:49 UTC 2020. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20180224.1) ... Setting up libsigsegv2:riscv64 (2.12-2) ... Setting up autopoint (0.19.8.1-10build1) ... Setting up libuchardet0:riscv64 (0.0.6-3build1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libbsd0:riscv64 (0.10.0-1) ... Setting up libelf1:riscv64 (0.176-1.1build1) ... Setting up libfile-stripnondeterminism-perl (1.6.3-2) ... Setting up libtool (2.4.6-13) ... Setting up libicu66:riscv64 (66.1-2ubuntu2) ... Setting up m4 (1.4.18-4) ... Setting up bsdmainutils (11.1.2ubuntu3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.6.3-2) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4build1) ... Setting up libxml2:riscv64 (2.9.10+dfsg-4build1) ... Setting up automake (1:1.16.1-4ubuntu6) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcroco3:riscv64 (0.6.13-1) ... Setting up gettext (0.19.8.1-10build1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up po-debconf (1.0.21) ... Setting up dh-autoreconf (19) ... Setting up debhelper (12.10ubuntu1) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.31-0ubuntu6~riscv64.1) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (riscv64 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.4.0-21-generic #25-Ubuntu SMP Tue Mar 31 01:57:06 UTC 2020 riscv64 (riscv64) Toolchain package versions: binutils_2.34-5ubuntu1 dpkg-dev_1.19.7ubuntu3 g++-9_9.3.0-8ubuntu1 gcc-9_9.3.0-8ubuntu1 libc6-dev_2.31-0ubuntu6~riscv64.1 libstdc++-9-dev_9.3.0-8ubuntu1 libstdc++6_10-20200324-1ubuntu1 linux-libc-dev_5.4.0-21.25 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1build1 apt_2.0.1 autoconf_2.69-11.1 automake_1:1.16.1-4ubuntu6 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu4 base-passwd_3.5.47 bash_5.0-6ubuntu1 binutils_2.34-5ubuntu1 binutils-common_2.34-5ubuntu1 binutils-riscv64-linux-gnu_2.34-5ubuntu1 bsdmainutils_11.1.2ubuntu3 bsdutils_1:2.34-0.1ubuntu8 build-essential_12.8ubuntu1 bzip2_1.0.8-2 ca-certificates_20190110ubuntu1 coreutils_8.30-3ubuntu2 cpp_4:9.3.0-1ubuntu2 cpp-9_9.3.0-8ubuntu1 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.10ubuntu1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dpkg_1.19.7ubuntu3 dpkg-dev_1.19.7ubuntu3 dwz_0.13-5 e2fsprogs_1.45.5-2ubuntu1 fakeroot_1.24-1 file_1:5.38-4 findutils_4.7.0-1ubuntu1 g++_4:9.3.0-1ubuntu2 g++-9_9.3.0-8ubuntu1 gcc_4:9.3.0-1ubuntu2 gcc-10-base_10-20200324-1ubuntu1 gcc-8-base_8.4.0-3ubuntu1 gcc-9_9.3.0-8ubuntu1 gcc-9-base_9.3.0-8ubuntu1 gettext_0.19.8.1-10build1 gettext-base_0.19.8.1-10build1 gpg_2.2.19-3ubuntu2 gpg-agent_2.2.19-3ubuntu2 gpgconf_2.2.19-3ubuntu2 gpgv_2.2.19-3ubuntu2 grep_3.4-1 groff-base_1.22.4-4build1 gzip_1.10-0ubuntu4 hostname_3.23 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libgcc-s1_10-20200324-1ubuntu1 libgcc1_1:10-20200324-1ubuntu1 libgcrypt20_1.8.5-5ubuntu1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.1-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.11.1-2ubuntu2 libgomp1_10-20200324-1ubuntu1 libgpg-error0_1.37-1 libgpm2_1.20.7-5 libhogweed5_3.5.1+really3.5.1-2 libicu66_66.1-2ubuntu2 libidn2-0_2.2.0-2 libisl22_0.22.1-1 liblocale-gettext-perl_1.07-4 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.34-0.1ubuntu8 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncursesw6_6.2-0ubuntu2 libnettle7_3.5.1+really3.5.1-2 libnpth0_1.6-1 libp11-kit0_0.23.20-1build1 libpam-modules_1.3.1-5ubuntu4 libpam-modules-bin_1.3.1-5ubuntu4 libpam-runtime_1.3.1-5ubuntu4 libpam0g_1.3.1-5ubuntu4 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12build1 libperl5.30_5.30.0-9build1 libpipeline1_1.5.2-2build1 libpng16-16_1.6.37-2 libreadline8_8.0-4 libselinux1_3.0-1build2 libsemanage-common_3.0-1build2 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pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 readline-common_8.0-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-2.1ubuntu1 tar_1.30+dfsg-7 tzdata_2019c-3ubuntu1 ubuntu-keyring_2020.02.11.1 util-linux_2.34-0.1ubuntu8 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: prank Binary: prank Architecture: any Version: 0.0.170427+dfsg-2build1 Maintainer: Debian Med Packaging Team Uploaders: Manuel Prinz , Andreas Tille Homepage: http://wasabiapp.org/software/prank/ Standards-Version: 4.1.4 Vcs-Browser: https://salsa.debian.org/med-team/prank Vcs-Git: https://salsa.debian.org/med-team/prank.git Testsuite: autopkgtest Build-Depends: debhelper (>= 11~) Package-List: prank deb science optional arch=any Checksums-Sha1: 48d122657e11779b3792ba0f71f6272fc5fabc4b 102244 prank_0.0.170427+dfsg.orig.tar.xz b4bd3d789e46e38b897aef10c727d95daf21c481 10876 prank_0.0.170427+dfsg-2build1.debian.tar.xz Checksums-Sha256: 49d7483db8a83d3fb8085778203f3114e122e181cc19fb2234916d5d34b8cac6 102244 prank_0.0.170427+dfsg.orig.tar.xz bdca00b47abc0792cc0bd547d018abbf13200f64e240a2c8941bcab2ad89589f 10876 prank_0.0.170427+dfsg-2build1.debian.tar.xz Files: 72cc8c3bf77d15f411e9709a45253cb3 102244 prank_0.0.170427+dfsg.orig.tar.xz c36a81e4c92bb28203ff6d974bcd2b6e 10876 prank_0.0.170427+dfsg-2build1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJEBAEBCAAuFiEE1WVxuIqLuvFAv2PWvX6qYHePpvUFAl53kbsQHGRva29AdWJ1 bnR1LmNvbQAKCRC9fqpgd4+m9QjrD/9QsCliHcIoMHJMDHX7Hz0TgndLO6wzS4QF uiULp+UvjYfawmtdlTvZWKtGXqAwNvgn4Af+9hxMiA29RaYckvLMpGCEhFMPTH9Y K7sRAu92HZ3IkiE1A9DUYkWw9dHSBEynQTXcw/sjwoZhukqOY5BwlzNHFPpkKvqj lmlVcLiZepK3RN/bqtLZOhHcubpRTnSYfCIXpUlIcnPioouwaIDRaoTEoCdYdhdd 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debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying fix-gcc6.patch dpkg-source: info: applying cross.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-19109320 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-19109320 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-19109320 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -B -rfakeroot dpkg-buildpackage: info: source package prank dpkg-buildpackage: info: source version 0.0.170427+dfsg-2build1 dpkg-buildpackage: info: source distribution focal dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 fakeroot debian/rules clean dh clean --sourcedirectory=src debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' # No distclean! See README.source ( cd src ; make clean ) make[2]: Entering directory '/<>/src' rm -f writefile.o treenode.o translatesequences.o terminalsequence.o terminalnode.o site.o sequence.o readnewick.o readfile.o readalignment.o pwsite.o pwhirschberg.o progressivealignment.o prank.o postprobability.o phylomatchscore.o node.o intmatrix.o hmmodel.o hirschberg.o guidetree.o fullprobability.o flmatrix.o eigen.o dbmatrix.o characterprobability.o boolmatrix.o ancestralsequence.o ancestralnode.o check_version.o exonerate_reads.o mafft_alignment.o bppancestors.o rm -f *~ core *.core make[2]: Leaving directory '/<>/src' ( cd src ; rm -f prank prank.1 ) make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--sourcedirectory=src dh_clean -O--sourcedirectory=src debian/rules build-arch dh build-arch --sourcedirectory=src dh_update_autotools_config -a -O--sourcedirectory=src dh_autoreconf -a -O--sourcedirectory=src dh_auto_configure -a -O--sourcedirectory=src debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build --verbose cd src && make -j4 "INSTALL=install --strip-program=true" make[2]: Entering directory '/<>/src' g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o writefile.o writefile.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o treenode.o treenode.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o translatesequences.o translatesequences.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o terminalsequence.o terminalsequence.cpp In file included from ancestralnode.h:24, from hmmodel.h:36, from config.h:31, from translatesequences.cpp:22: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ In file included from ancestralnode.h:24, from hmmodel.h:36, from config.h:31, from terminalsequence.cpp:24: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ In file included from ancestralnode.h:24, from writefile.h:25, from writefile.cpp:27: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ In file included from ancestralnode.h:24, from hmmodel.h:36, from config.h:31, from treenode.cpp:25: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o terminalnode.o terminalnode.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o site.o site.cpp In file included from terminalnode.h:23, from terminalnode.cpp:22: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o sequence.o sequence.cpp In file included from ancestralnode.h:24, from hmmodel.h:36, from site.cpp:22: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o readnewick.o readnewick.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o readfile.o readfile.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o readalignment.o readalignment.cpp In file included from readnewick.h:29, from readnewick.cpp:26: treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ In file included from readalignment.h:28, from readalignment.cpp:23: treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o pwsite.o pwsite.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o pwhirschberg.o pwhirschberg.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o progressivealignment.o progressivealignment.cpp In file included from ancestralnode.h:24, from hmmodel.h:36, from config.h:31, from pwhirschberg.cpp:25: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ In file included from readnewick.h:29, from progressivealignment.cpp:28: treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o prank.o prank.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o postprobability.o postprobability.cpp In file included from ancestralnode.h:24, from hmmodel.h:36, from config.h:31, from progressivealignment.h:30, from prank.cpp:28: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ In file included from ancestralnode.h:24, from hmmodel.h:36, from config.h:31, from postprobability.cpp:23: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o phylomatchscore.o phylomatchscore.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o node.o node.cpp In file included from ancestralnode.h:24, from hmmodel.h:36, from config.h:31, from phylomatchscore.cpp:23: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o intmatrix.o intmatrix.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o hmmodel.o hmmodel.cpp In file included from ancestralnode.h:24, from hmmodel.h:36, from hmmodel.cpp:26: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o hirschberg.o hirschberg.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o guidetree.o guidetree.cpp In file included from ancestralnode.h:24, from hmmodel.h:36, from config.h:31, from guidetree.cpp:25: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ In file included from ancestralnode.h:24, from hmmodel.h:36, from config.h:31, from hirschberg.cpp:25: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o fullprobability.o fullprobability.cpp In file included from ancestralnode.h:24, from hmmodel.h:36, from config.h:31, from fullprobability.cpp:25: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o flmatrix.o flmatrix.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o eigen.o eigen.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o dbmatrix.o dbmatrix.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o characterprobability.o characterprobability.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o boolmatrix.o boolmatrix.cpp In file included from ancestralnode.h:24, from hmmodel.h:36, from config.h:31, from characterprobability.cpp:24: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o ancestralsequence.o ancestralsequence.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o ancestralnode.o ancestralnode.cpp In file included from ancestralnode.h:24, from hmmodel.h:36, from config.h:31, from ancestralsequence.cpp:24: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ In file included from ancestralnode.h:24, from hmmodel.h:36, from config.h:31, from ancestralnode.cpp:27: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ ancestralnode.cpp: In member function ‘std::string AncestralNode::getThisAncCharactersAt(int)’: ancestralnode.cpp:1517:1: warning: control reaches end of non-void function [-Wreturn-type] 1517 | } | ^ g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o check_version.o check_version.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o exonerate_reads.o exonerate_reads.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o mafft_alignment.o mafft_alignment.cpp g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -pipe -O3 -I. -I/usr/include -o bppancestors.o bppancestors.cpp In file included from ancestralnode.h:24, from hmmodel.h:36, from config.h:31, from mafft_alignment.cpp:6: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ In file included from ancestralnode.h:24, from hmmodel.h:36, from config.h:31, from exonerate_reads.cpp:10: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ In file included from ancestralnode.h:24, from bppancestors.h:24, from bppancestors.cpp:29: ./treenode.h: In member function ‘virtual bool TreeNode::updateInsertionSite(int, bool)’: ./treenode.h:353:63: warning: no return statement in function returning non-void [-Wreturn-type] 353 | virtual bool updateInsertionSite(int i, bool has_parent) {} | ^ pod2man --utf8 --center "The Probabilistic Alignment Kit" -release="v.121211" --section=1 --name="PRANK" prank.1.pod >prank.1 g++ -o prank writefile.o treenode.o translatesequences.o terminalsequence.o terminalnode.o site.o sequence.o readnewick.o readfile.o readalignment.o pwsite.o pwhirschberg.o progressivealignment.o prank.o postprobability.o phylomatchscore.o node.o intmatrix.o hmmodel.o hirschberg.o guidetree.o fullprobability.o flmatrix.o eigen.o dbmatrix.o characterprobability.o boolmatrix.o ancestralsequence.o ancestralnode.o check_version.o exonerate_reads.o mafft_alignment.o bppancestors.o -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/<>/src' make[1]: Leaving directory '/<>' dh_auto_test -a -O--sourcedirectory=src create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --sourcedirectory=src dh_testroot -a -O--sourcedirectory=src dh_prep -a -O--sourcedirectory=src dh_auto_install -a -O--sourcedirectory=src debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install src/prank /usr/bin dh_installman src/prank.1 make[1]: Leaving directory '/<>' dh_installdocs -a -O--sourcedirectory=src debian/rules override_dh_installchangelogs make[1]: Entering directory '/<>' dh_installchangelogs VERSION_HISTORY make[1]: Leaving directory '/<>' dh_installexamples -a -O--sourcedirectory=src dh_installman -a -O--sourcedirectory=src dh_installinit -a -O--sourcedirectory=src dh_perl -a -O--sourcedirectory=src dh_link -a -O--sourcedirectory=src dh_strip_nondeterminism -a -O--sourcedirectory=src dh_compress -a -O--sourcedirectory=src dh_fixperms -a -O--sourcedirectory=src dh_missing -a -O--sourcedirectory=src dh_strip -a -O--sourcedirectory=src dh_makeshlibs -a -O--sourcedirectory=src dh_shlibdeps -a -O--sourcedirectory=src dh_installdeb -a -O--sourcedirectory=src dh_gencontrol -a -O--sourcedirectory=src dh_md5sums -a -O--sourcedirectory=src dh_builddeb -a -O--sourcedirectory=src INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 pkgstriptranslations: processing prank (in debian/prank); do_strip: , oemstrip: pkgstriptranslations: processing prank-dbgsym (in debian/.debhelper/prank/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/prank/DEBIAN/control, package prank, directory debian/prank .. removing usr/share/doc/prank/changelog.gz pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: Running PNG optimization (using 4 cpus) for package prank ... pkgstripfiles: No PNG files. dpkg-deb: building package 'prank' in '../prank_0.0.170427+dfsg-2build1_riscv64.deb'. pkgstripfiles: processing control file: debian/.debhelper/prank/dbgsym-root/DEBIAN/control, package prank-dbgsym, directory debian/.debhelper/prank/dbgsym-root dpkg-deb: building package 'prank-dbgsym' in 'debian/.debhelper/scratch-space/build-prank/prank-dbgsym_0.0.170427+dfsg-2build1_riscv64.deb'. Renaming prank-dbgsym_0.0.170427+dfsg-2build1_riscv64.deb to prank-dbgsym_0.0.170427+dfsg-2build1_riscv64.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../prank_0.0.170427+dfsg-2build1_riscv64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-04-03T15:02:59Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ prank_0.0.170427+dfsg-2build1_riscv64.changes: ---------------------------------------------- Format: 1.8 Date: Sun, 22 Mar 2020 16:54:34 +0100 Source: prank Binary: prank Architecture: riscv64 Version: 0.0.170427+dfsg-2build1 Distribution: focal Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Matthias Klose Description: prank - Probabilistic Alignment Kit for DNA, codon and amino-acid sequenc Changes: prank (0.0.170427+dfsg-2build1) focal; urgency=medium . * No-change rebuild for libgcc-s1 package name change. 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b6c62dbee66ff68c896d0f81f875afcfca715e1d00578b568f3489d41b19b5bb 363300 prank_0.0.170427+dfsg-2build1_riscv64.deb Build-Origin: Ubuntu Build-Architecture: riscv64 Build-Date: Fri, 03 Apr 2020 15:02:52 +0000 Build-Path: /<> Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.1-4ubuntu6), autopoint (= 0.19.8.1-10build1), autotools-dev (= 20180224.1), base-files (= 11ubuntu4), base-passwd (= 3.5.47), bash (= 5.0-6ubuntu1), binutils (= 2.34-5ubuntu1), binutils-common (= 2.34-5ubuntu1), binutils-riscv64-linux-gnu (= 2.34-5ubuntu1), bsdmainutils (= 11.1.2ubuntu3), bsdutils (= 1:2.34-0.1ubuntu8), build-essential (= 12.8ubuntu1), bzip2 (= 1.0.8-2), coreutils (= 8.30-3ubuntu2), cpp (= 4:9.3.0-1ubuntu2), cpp-9 (= 9.3.0-8ubuntu1), dash (= 0.5.10.2-6), debconf (= 1.5.73), debhelper (= 12.10ubuntu1), debianutils (= 4.9.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.6.3-2), diffutils (= 1:3.7-3), dpkg (= 1.19.7ubuntu3), dpkg-dev (= 1.19.7ubuntu3), dwz (= 0.13-5), file (= 1:5.38-4), findutils (= 4.7.0-1ubuntu1), g++ (= 4:9.3.0-1ubuntu2), g++-9 (= 9.3.0-8ubuntu1), gcc (= 4:9.3.0-1ubuntu2), gcc-10-base (= 10-20200324-1ubuntu1), gcc-9 (= 9.3.0-8ubuntu1), gcc-9-base (= 9.3.0-8ubuntu1), gettext (= 0.19.8.1-10build1), gettext-base (= 0.19.8.1-10build1), grep (= 3.4-1), groff-base (= 1.22.4-4build1), gzip (= 1.10-0ubuntu4), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-6), libarchive-zip-perl (= 1.67-2), libatomic1 (= 10-20200324-1ubuntu1), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-2ubuntu6), libaudit1 (= 1:2.8.5-2ubuntu6), libbinutils (= 2.34-5ubuntu1), libblkid1 (= 2.34-0.1ubuntu8), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libc-bin (= 2.31-0ubuntu6~riscv64.1), libc-dev-bin (= 2.31-0ubuntu6~riscv64.1), libc6 (= 2.31-0ubuntu6~riscv64.1), libc6-dev (= 2.31-0ubuntu6~riscv64.1), libcap-ng0 (= 0.7.9-2.1build1), libcc1-0 (= 10-20200324-1ubuntu1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.10-10ubuntu4), libcrypt1 (= 1:4.4.10-10ubuntu4), libctf-nobfd0 (= 2.34-5ubuntu1), libctf0 (= 2.34-5ubuntu1), libdb5.3 (= 5.3.28+dfsg1-0.6ubuntu2), libdebconfclient0 (= 0.251ubuntu1), libdebhelper-perl (= 12.10ubuntu1), libdpkg-perl (= 1.19.7ubuntu3), libelf1 (= 0.176-1.1build1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.6.3-2), libgcc-9-dev (= 9.3.0-8ubuntu1), libgcc-s1 (= 10-20200324-1ubuntu1), libgcc1 (= 1:10-20200324-1ubuntu1), libgcrypt20 (= 1.8.5-5ubuntu1), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.64.1-1), libgmp10 (= 2:6.2.0+dfsg-4), libgomp1 (= 10-20200324-1ubuntu1), libgpg-error0 (= 1.37-1), libicu66 (= 66.1-2ubuntu2), libisl22 (= 0.22.1-1), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.38-4), libmagic1 (= 1:5.38-4), libmount1 (= 2.34-0.1ubuntu8), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libpam-modules (= 1.3.1-5ubuntu4), libpam-modules-bin (= 1.3.1-5ubuntu4), libpam-runtime (= 1.3.1-5ubuntu4), libpam0g (= 1.3.1-5ubuntu4), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-12build1), libperl5.30 (= 5.30.0-9build1), libpipeline1 (= 1.5.2-2build1), libselinux1 (= 3.0-1build2), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.34-0.1ubuntu8), libstdc++-9-dev (= 9.3.0-8ubuntu1), libstdc++6 (= 10-20200324-1ubuntu1), libsub-override-perl (= 0.09-2), libsystemd0 (= 244.3-1ubuntu1), libtinfo6 (= 6.2-0ubuntu2), libtool (= 2.4.6-13), libuchardet0 (= 0.0.6-3build1), libudev1 (= 244.3-1ubuntu1), libunistring2 (= 0.9.10-2), libuuid1 (= 2.34-0.1ubuntu8), libxml2 (= 2.9.10+dfsg-4build1), libzstd1 (= 1.4.4+dfsg-3), linux-libc-dev (= 5.4.0-21.25), login (= 1:4.8.1-1ubuntu3), lsb-base (= 11.1.0ubuntu2), m4 (= 1.4.18-4), make (= 4.2.1-1.2), man-db (= 2.9.1-1), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2-0ubuntu2), ncurses-bin (= 6.2-0ubuntu2), patch (= 2.7.6-6), perl (= 5.30.0-9build1), perl-base (= 5.30.0-9build1), perl-modules-5.30 (= 5.30.0-9build1), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-2.1ubuntu1), tar (= 1.30+dfsg-7), tzdata (= 2019c-3ubuntu1), util-linux (= 2.34-0.1ubuntu8), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-2ubuntu1) Environment: DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1584892474" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ prank_0.0.170427+dfsg-2build1_riscv64.deb ----------------------------------------- new Debian package, version 2.0. size 363300 bytes: control archive=1552 bytes. 1996 bytes, 38 lines control 468 bytes, 7 lines md5sums Package: prank Version: 0.0.170427+dfsg-2build1 Architecture: riscv64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 867 Depends: libc6 (>= 2.27), libgcc-s1 (>= 3.4), libstdc++6 (>= 9) Enhances: t-coffee Section: science Priority: optional Homepage: http://wasabiapp.org/software/prank/ Description: Probabilistic Alignment Kit for DNA, codon and amino-acid sequences PRANK is a probabilistic multiple alignment program for DNA, codon and amino-acid sequences. It's based on a novel algorithm that treats insertions correctly and avoids over-estimation of the number of deletion events. In addition, PRANK borrows ideas from maximum likelihood methods used in phylogenetics and correctly takes into account the evolutionary distances between sequences. Lastly, PRANK allows for defining a potential structure for sequences to be aligned and then, simultaneously with the alignment, predicts the locations of structural units in the sequences. . PRANK is a command-line program for UNIX-style environments but the same sequence alignment engine is implemented in the graphical program PRANKSTER. In addition to providing a user-friendly interface to those not familiar with Unix systems, PRANKSTER is an alignment browser for alignments saved in the HSAML format. The novel format allows for storing all the information generated by the aligner and the alignment browser is a convenient way to analyse and manipulate the data. . PRANK aims at an evolutionarily correct sequence alignment and often the result looks different from ones generated with other alignment methods. There are, however, cases where the different look is caused by violations of the method's assumptions. To understand why things may go wrong and how to avoid that, read this explanation of differences between PRANK and traditional progressive alignment methods. drwxr-xr-x root/root 0 2020-03-22 15:54 ./ drwxr-xr-x root/root 0 2020-03-22 15:54 ./usr/ drwxr-xr-x root/root 0 2020-03-22 15:54 ./usr/bin/ -rwxr-xr-x root/root 860920 2020-03-22 15:54 ./usr/bin/prank drwxr-xr-x root/root 0 2020-03-22 15:54 ./usr/share/ drwxr-xr-x root/root 0 2020-03-22 15:54 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-03-22 15:54 ./usr/share/doc/prank/ -rw-r--r-- root/root 261 2018-05-27 14:03 ./usr/share/doc/prank/README.test -rw-r--r-- root/root 881 2020-03-22 15:54 ./usr/share/doc/prank/changelog.Debian.gz -rw-r--r-- root/root 1271 2018-05-27 14:03 ./usr/share/doc/prank/copyright drwxr-xr-x root/root 0 2020-03-22 15:54 ./usr/share/doc/prank/examples/ -rw-r--r-- root/root 5527 2018-05-27 14:03 ./usr/share/doc/prank/examples/sample.cdna.fasta.gz -rw-r--r-- root/root 366 2018-05-27 14:03 ./usr/share/doc/prank/run-unit-test drwxr-xr-x root/root 0 2020-03-22 15:54 ./usr/share/man/ drwxr-xr-x root/root 0 2020-03-22 15:54 ./usr/share/man/man1/ -rw-r--r-- root/root 2932 2020-03-22 15:54 ./usr/share/man/man1/prank.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: riscv64 Build Type: any Build-Space: 80028 Build-Time: 465 Distribution: focal Host Architecture: riscv64 Install-Time: 109 Job: prank_0.0.170427+dfsg-2build1.dsc Machine Architecture: riscv64 Package: prank Package-Time: 605 Source-Version: 0.0.170427+dfsg-2build1 Space: 80028 Status: successful Version: 0.0.170427+dfsg-2build1 -------------------------------------------------------------------------------- Finished at 2020-04-03T15:02:59Z Build needed 00:10:05, 80028k disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=focal --arch=riscv64 PACKAGEBUILD-19109320 Scanning for processes to kill in build PACKAGEBUILD-19109320 RUN: /usr/share/launchpad-buildd/bin/in-target umount-chroot --backend=chroot --series=focal --arch=riscv64 PACKAGEBUILD-19109320 Stopping target for build PACKAGEBUILD-19109320 RUN: /usr/share/launchpad-buildd/bin/in-target remove-build --backend=chroot --series=focal --arch=riscv64 PACKAGEBUILD-19109320 Removing build PACKAGEBUILD-19109320