RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux bos01-arm64-013 4.4.0-92-generic #115-Ubuntu SMP Thu Aug 10 09:10:33 UTC 2017 aarch64 Buildd toolchain package versions: launchpad-buildd_147 python-lpbuildd_147 sbuild_0.67.0-2ubuntu7 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.2 dpkg-dev_1.18.4ubuntu1.2 python-debian_0.1.27ubuntu2 qemu-user-static_1:2.5+dfsg-5ubuntu10.14. Syncing the system clock with the buildd NTP service... 22 Aug 21:10:33 ntpdate[1784]: adjust time server 10.211.37.1 offset -0.082403 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-13282669', '/home/buildd/filecache-default/42e17d2fa25e748a1aa6eaeef2fe6722beaed5a9'] Unpacking chroot for build PACKAGEBUILD-13282669 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-13282669'] Mounting chroot for build PACKAGEBUILD-13282669 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-13282669', 'deb http://ftpmaster.internal/ubuntu artful main universe', 'deb http://ftpmaster.internal/ubuntu artful-security main universe', 'deb http://ftpmaster.internal/ubuntu artful-updates main universe', 'deb http://ftpmaster.internal/ubuntu artful-proposed main universe'] Overriding sources.list in build-PACKAGEBUILD-13282669 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-13282669', 'armhf'] Updating debian chroot for build PACKAGEBUILD-13282669 Get:1 http://ftpmaster.internal/ubuntu artful InRelease [237 kB] Get:2 http://ftpmaster.internal/ubuntu artful-security InRelease [65.5 kB] Get:3 http://ftpmaster.internal/ubuntu artful-updates InRelease [65.5 kB] Get:4 http://ftpmaster.internal/ubuntu artful-proposed InRelease [235 kB] Get:5 http://ftpmaster.internal/ubuntu artful/main armhf Packages [1097 kB] Get:6 http://ftpmaster.internal/ubuntu artful/main Translation-en [560 kB] Get:7 http://ftpmaster.internal/ubuntu artful/universe armhf Packages [7993 kB] Get:8 http://ftpmaster.internal/ubuntu artful/universe Translation-en [4780 kB] Get:9 http://ftpmaster.internal/ubuntu artful-proposed/main armhf Packages [106 kB] Get:10 http://ftpmaster.internal/ubuntu artful-proposed/main Translation-en [61.0 kB] Get:11 http://ftpmaster.internal/ubuntu artful-proposed/universe armhf Packages [399 kB] Get:12 http://ftpmaster.internal/ubuntu artful-proposed/universe Translation-en [189 kB] Fetched 15.8 MB in 5s (2721 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: g++-6 libperl5.24 libstdc++-6-dev perl-modules-5.24 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: cpp-7 g++-7 gcc-7 gcc-7-base libasan4 libcilkrts5 libgcc-7-dev libperl5.26 libstdc++-7-dev perl-modules-5.26 The following packages will be upgraded: advancecomp apt apt-transport-https base-files bash binutils bsdutils ca-certificates cpp cpp-6 debconf debianutils diffutils dmsetup dpkg dpkg-dev e2fslibs e2fsprogs findutils g++ g++-6 gcc gcc-6 gcc-6-base grep init init-system-helpers libapparmor1 libapt-pkg5.0 libasan3 libasn1-8-heimdal libassuan0 libatomic1 libaudit-common libaudit1 libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcc1-0 libcomerr2 libcryptsetup4 libcurl3-gnutls libdb5.3 libdevmapper1.02.1 libdpkg-perl libfdisk1 libgcc-6-dev libgcc1 libgcrypt20 libgnutls30 libgomp1 libgpg-error0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libidn2-0 libip4tc0 libk5crypto3 libkmod2 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblzma5 libmount1 libnpth0 libp11-kit0 libpcre3 libpng16-16 libpsl5 libroken18-heimdal libsasl2-2 libsasl2-modules-db libselinux1 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libss2 libssl1.0.0 libstdc++-6-dev libstdc++6 libsystemd0 libtasn1-6 libubsan0 libudev1 libusb-0.1-4 libuuid1 libwind0-heimdal linux-libc-dev login mount multiarch-support openssl passwd perl perl-base sensible-utils systemd systemd-sysv tar tzdata util-linux xz-utils zlib1g 112 upgraded, 10 newly installed, 0 to remove and 0 not upgraded. Need to get 146 MB of archives. After this operation, 429 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu artful/main armhf debconf all 1.5.63 [136 kB] Get:2 http://ftpmaster.internal/ubuntu artful/main armhf perl-modules-5.26 all 5.26.0-5 [2762 kB] Get:3 http://ftpmaster.internal/ubuntu artful/main armhf libperl5.26 armhf 5.26.0-5 [2860 kB] Get:4 http://ftpmaster.internal/ubuntu artful/main armhf perl armhf 5.26.0-5 [205 kB] Get:5 http://ftpmaster.internal/ubuntu artful/main armhf perl-base armhf 5.26.0-5 [1280 kB] Get:6 http://ftpmaster.internal/ubuntu artful/main armhf libc6-dev armhf 2.24-12ubuntu1 [1810 kB] Get:7 http://ftpmaster.internal/ubuntu artful/main armhf libc-dev-bin armhf 2.24-12ubuntu1 [59.4 kB] Get:8 http://ftpmaster.internal/ubuntu artful-proposed/main armhf linux-libc-dev armhf 4.12.0-12.13 [936 kB] Get:9 http://ftpmaster.internal/ubuntu artful-proposed/main armhf gcc-7-base armhf 7.2.0-1ubuntu1 [18.0 kB] Get:10 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libgcc1 armhf 1:7.2.0-1ubuntu1 [38.4 kB] Get:11 http://ftpmaster.internal/ubuntu artful/main armhf libc6 armhf 2.24-12ubuntu1 [2143 kB] Get:12 http://ftpmaster.internal/ubuntu artful/main armhf libdb5.3 armhf 5.3.28-13 [589 kB] Get:13 http://ftpmaster.internal/ubuntu artful-proposed/main armhf zlib1g armhf 1:1.2.11.dfsg-0ubuntu2 [49.6 kB] Get:14 http://ftpmaster.internal/ubuntu artful-proposed/main armhf init-system-helpers all 1.49 [37.0 kB] Get:15 http://ftpmaster.internal/ubuntu artful/main armhf base-files armhf 9.6ubuntu101 [59.1 kB] Get:16 http://ftpmaster.internal/ubuntu artful/main armhf debianutils armhf 4.8.2 [85.0 kB] Get:17 http://ftpmaster.internal/ubuntu artful/main armhf bash armhf 4.4-5ubuntu1 [527 kB] Get:18 http://ftpmaster.internal/ubuntu artful/main armhf bsdutils armhf 1:2.30.1-0ubuntu3 [54.8 kB] Get:19 http://ftpmaster.internal/ubuntu artful/main armhf diffutils armhf 1:3.6-1 [153 kB] Get:20 http://ftpmaster.internal/ubuntu artful/main armhf tar armhf 1.29b-2 [209 kB] Get:21 http://ftpmaster.internal/ubuntu artful/main armhf dpkg armhf 1.18.24ubuntu1 [1099 kB] Get:22 http://ftpmaster.internal/ubuntu artful/main armhf e2fslibs armhf 1.43.5-1 [140 kB] Get:23 http://ftpmaster.internal/ubuntu artful/main armhf e2fsprogs armhf 1.43.5-1 [468 kB] Get:24 http://ftpmaster.internal/ubuntu artful/main armhf findutils armhf 4.6.0+git+20170729-2 [275 kB] Get:25 http://ftpmaster.internal/ubuntu artful/main armhf grep armhf 3.1-2 [145 kB] Get:26 http://ftpmaster.internal/ubuntu artful-proposed/main armhf login armhf 1:4.2-3.2ubuntu4 [301 kB] Get:27 http://ftpmaster.internal/ubuntu artful/main armhf libuuid1 armhf 2.30.1-0ubuntu3 [14.1 kB] Get:28 http://ftpmaster.internal/ubuntu artful/main armhf libblkid1 armhf 2.30.1-0ubuntu3 [103 kB] Get:29 http://ftpmaster.internal/ubuntu artful/main armhf libpcre3 armhf 2:8.39-4 [208 kB] Get:30 http://ftpmaster.internal/ubuntu artful/main armhf libselinux1 armhf 2.6-3build2 [58.8 kB] Get:31 http://ftpmaster.internal/ubuntu artful/main armhf libmount1 armhf 2.30.1-0ubuntu3 [113 kB] Get:32 http://ftpmaster.internal/ubuntu artful/main armhf libfdisk1 armhf 2.30.1-0ubuntu3 [140 kB] Get:33 http://ftpmaster.internal/ubuntu artful/main armhf libsmartcols1 armhf 2.30.1-0ubuntu3 [67.5 kB] Get:34 http://ftpmaster.internal/ubuntu artful/main armhf util-linux armhf 2.30.1-0ubuntu3 [865 kB] Get:35 http://ftpmaster.internal/ubuntu artful/main armhf mount armhf 2.30.1-0ubuntu3 [122 kB] Get:36 http://ftpmaster.internal/ubuntu artful/main armhf libc-bin armhf 2.24-12ubuntu1 [491 kB] Get:37 http://ftpmaster.internal/ubuntu artful-proposed/main armhf liblzma5 armhf 5.2.2-1.3 [82.9 kB] Get:38 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libstdc++6 armhf 7.2.0-1ubuntu1 [346 kB] Get:39 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libapt-pkg5.0 armhf 1.5~beta2 [692 kB] Get:40 http://ftpmaster.internal/ubuntu artful/main armhf libtasn1-6 armhf 4.12-2.1 [30.7 kB] Get:41 http://ftpmaster.internal/ubuntu artful/main armhf libp11-kit0 armhf 0.23.7-3 [163 kB] Get:42 http://ftpmaster.internal/ubuntu artful/main armhf libgnutls30 armhf 3.5.8-6ubuntu2 [608 kB] Get:43 http://ftpmaster.internal/ubuntu artful/main armhf libk5crypto3 armhf 1.15.1-2 [83.3 kB] Get:44 http://ftpmaster.internal/ubuntu artful/main armhf libgssapi-krb5-2 armhf 1.15.1-2 [98.7 kB] Get:45 http://ftpmaster.internal/ubuntu artful/main armhf libkrb5-3 armhf 1.15.1-2 [231 kB] Get:46 http://ftpmaster.internal/ubuntu artful/main armhf libkrb5support0 armhf 1.15.1-2 [28.4 kB] Get:47 http://ftpmaster.internal/ubuntu artful/main armhf libcomerr2 armhf 1.43.5-1 [10.1 kB] Get:48 http://ftpmaster.internal/ubuntu artful/main armhf libidn2-0 armhf 2.0.2-3 [86.7 kB] Get:49 http://ftpmaster.internal/ubuntu artful/main armhf libldap-2.4-2 armhf 2.4.45+dfsg-1ubuntu1 [132 kB] Get:50 http://ftpmaster.internal/ubuntu artful/main armhf libldap-common all 2.4.45+dfsg-1ubuntu1 [16.6 kB] Get:51 http://ftpmaster.internal/ubuntu artful/main armhf libroken18-heimdal armhf 7.4.0.dfsg.1-2 [33.9 kB] Get:52 http://ftpmaster.internal/ubuntu artful/main armhf libasn1-8-heimdal armhf 7.4.0.dfsg.1-2 [138 kB] Get:53 http://ftpmaster.internal/ubuntu artful/main armhf libheimbase1-heimdal armhf 7.4.0.dfsg.1-2 [24.0 kB] Get:54 http://ftpmaster.internal/ubuntu artful/main armhf libhcrypto4-heimdal armhf 7.4.0.dfsg.1-2 [77.4 kB] Get:55 http://ftpmaster.internal/ubuntu artful/main armhf libwind0-heimdal armhf 7.4.0.dfsg.1-2 [46.9 kB] Get:56 http://ftpmaster.internal/ubuntu artful/main armhf libhx509-5-heimdal armhf 7.4.0.dfsg.1-2 [88.3 kB] Get:57 http://ftpmaster.internal/ubuntu artful/main armhf libsqlite3-0 armhf 3.19.3-3 [416 kB] Get:58 http://ftpmaster.internal/ubuntu artful/main armhf libkrb5-26-heimdal armhf 7.4.0.dfsg.1-2 [168 kB] Get:59 http://ftpmaster.internal/ubuntu artful/main armhf libheimntlm0-heimdal armhf 7.4.0.dfsg.1-2 [13.3 kB] Get:60 http://ftpmaster.internal/ubuntu artful/main armhf libgssapi3-heimdal armhf 7.4.0.dfsg.1-2 [79.5 kB] Get:61 http://ftpmaster.internal/ubuntu artful/main armhf libsasl2-modules-db armhf 2.1.27~101-g0780600+dfsg-3ubuntu1 [13.1 kB] Get:62 http://ftpmaster.internal/ubuntu artful/main armhf libsasl2-2 armhf 2.1.27~101-g0780600+dfsg-3ubuntu1 [41.9 kB] Get:63 http://ftpmaster.internal/ubuntu artful/main armhf libpsl5 armhf 0.18.0-2 [39.5 kB] Get:64 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libcurl3-gnutls armhf 7.55.0-1ubuntu1 [163 kB] Get:65 http://ftpmaster.internal/ubuntu artful-proposed/main armhf apt-transport-https armhf 1.5~beta2 [29.6 kB] Get:66 http://ftpmaster.internal/ubuntu artful-proposed/main armhf apt armhf 1.5~beta2 [1068 kB] Get:67 http://ftpmaster.internal/ubuntu artful/main armhf libip4tc0 armhf 1.6.1-2ubuntu1 [17.9 kB] Get:68 http://ftpmaster.internal/ubuntu artful/main armhf libapparmor1 armhf 2.11.0-2ubuntu16 [24.9 kB] Get:69 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libaudit-common all 1:2.7.7-1ubuntu2 [3998 B] Get:70 http://ftpmaster.internal/ubuntu artful/main armhf libcap-ng0 armhf 0.7.7-3build1 [9794 B] Get:71 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libaudit1 armhf 1:2.7.7-1ubuntu2 [35.2 kB] Get:72 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libudev1 armhf 234-2ubuntu8 [48.0 kB] Get:73 http://ftpmaster.internal/ubuntu artful/main armhf libdevmapper1.02.1 armhf 2:1.02.137-2ubuntu3 [123 kB] Get:74 http://ftpmaster.internal/ubuntu artful/main armhf libgpg-error0 armhf 1.27-3 [32.0 kB] Get:75 http://ftpmaster.internal/ubuntu artful/main armhf libgcrypt20 armhf 1.7.8-2 [344 kB] Get:76 http://ftpmaster.internal/ubuntu artful/main armhf libcryptsetup4 armhf 2:1.7.2-0ubuntu4 [66.1 kB] Get:77 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libkmod2 armhf 24-1ubuntu2 [33.4 kB] Get:78 http://ftpmaster.internal/ubuntu artful-proposed/main armhf systemd armhf 234-2ubuntu8 [2556 kB] Get:79 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libsystemd0 armhf 234-2ubuntu8 [185 kB] Get:80 http://ftpmaster.internal/ubuntu artful-proposed/main armhf init armhf 1.49 [6040 B] Get:81 http://ftpmaster.internal/ubuntu artful-proposed/main armhf systemd-sysv armhf 234-2ubuntu8 [11.9 kB] Get:82 http://ftpmaster.internal/ubuntu artful/main armhf libsemanage-common all 2.6-2build2 [6682 B] Get:83 http://ftpmaster.internal/ubuntu artful/main armhf libsemanage1 armhf 2.6-2build2 [69.7 kB] Get:84 http://ftpmaster.internal/ubuntu artful/main armhf libss2 armhf 1.43.5-1 [9406 B] Get:85 http://ftpmaster.internal/ubuntu artful-proposed/main armhf passwd armhf 1:4.2-3.2ubuntu4 [739 kB] Get:86 http://ftpmaster.internal/ubuntu artful/main armhf sensible-utils all 0.0.10 [14.6 kB] Get:87 http://ftpmaster.internal/ubuntu artful/main armhf dmsetup armhf 2:1.02.137-2ubuntu3 [69.9 kB] Get:88 http://ftpmaster.internal/ubuntu artful/main armhf libassuan0 armhf 2.4.3-3 [28.3 kB] Get:89 http://ftpmaster.internal/ubuntu artful/main armhf libnpth0 armhf 1.5-2 [6582 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http://ftpmaster.internal/ubuntu artful/main armhf cpp armhf 4:7.1.0-1ubuntu3 [27.6 kB] Get:101 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libgomp1 armhf 7.2.0-1ubuntu1 [64.3 kB] Get:102 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libubsan0 armhf 7.2.0-1ubuntu1 [104 kB] Get:103 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libatomic1 armhf 7.2.0-1ubuntu1 [6252 B] Get:104 http://ftpmaster.internal/ubuntu artful/main armhf libasan3 armhf 6.4.0-4ubuntu1 [292 kB] Get:105 http://ftpmaster.internal/ubuntu artful/universe armhf g++-6 armhf 6.4.0-4ubuntu1 [5923 kB] Get:106 http://ftpmaster.internal/ubuntu artful/main armhf libstdc++-6-dev armhf 6.4.0-4ubuntu1 [1510 kB] Get:107 http://ftpmaster.internal/ubuntu artful/main armhf gcc-6 armhf 6.4.0-4ubuntu1 [5807 kB] Get:108 http://ftpmaster.internal/ubuntu artful/main armhf libgcc-6-dev armhf 6.4.0-4ubuntu1 [549 kB] Get:109 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libcc1-0 armhf 7.2.0-1ubuntu1 [31.4 kB] Get:110 http://ftpmaster.internal/ubuntu artful/main armhf cpp-6 armhf 6.4.0-4ubuntu1 [5204 kB] Get:111 http://ftpmaster.internal/ubuntu artful/main armhf gcc-6-base armhf 6.4.0-4ubuntu1 [16.8 kB] Get:112 http://ftpmaster.internal/ubuntu artful/main armhf dpkg-dev all 1.18.24ubuntu1 [608 kB] Get:113 http://ftpmaster.internal/ubuntu artful/main armhf libdpkg-perl all 1.18.24ubuntu1 [209 kB] Get:114 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libasan4 armhf 7.2.0-1ubuntu1 [308 kB] Get:115 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libcilkrts5 armhf 7.2.0-1ubuntu1 [35.9 kB] Get:116 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libgcc-7-dev armhf 7.2.0-1ubuntu1 [683 kB] Get:117 http://ftpmaster.internal/ubuntu artful-proposed/main armhf gcc-7 armhf 7.2.0-1ubuntu1 [29.0 MB] Get:118 http://ftpmaster.internal/ubuntu artful/main armhf gcc armhf 4:7.1.0-1ubuntu3 [5290 B] Get:119 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libstdc++-7-dev armhf 7.2.0-1ubuntu1 [1513 kB] Get:120 http://ftpmaster.internal/ubuntu artful-proposed/main armhf g++-7 armhf 7.2.0-1ubuntu1 [31.7 MB] Get:121 http://ftpmaster.internal/ubuntu artful/main armhf g++ armhf 4:7.1.0-1ubuntu3 [1484 B] Get:122 http://ftpmaster.internal/ubuntu artful/main armhf libusb-0.1-4 armhf 2:0.1.12-31 [15.6 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 146 MB in 11s (12.7 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12213 files and directories currently installed.) Preparing to unpack .../debconf_1.5.63_all.deb ... Unpacking debconf (1.5.63) over (1.5.60ubuntu1) ... Setting up debconf (1.5.63) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14092 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.5.8-6ubuntu2_armhf.deb ... Unpacking libgnutls30:armhf (3.5.8-6ubuntu2) over (3.5.6-4ubuntu4) ... Setting up libgnutls30:armhf (3.5.8-6ubuntu2) ... (Reading database ... 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Unpacking systemd (234-2ubuntu8) over (232-21ubuntu3) ... dpkg: warning: unable to delete old directory '/etc/dbus-1/system.d': Directory not empty dpkg: warning: unable to delete old directory '/etc/dbus-1': Directory not empty Preparing to unpack .../libsystemd0_234-2ubuntu8_armhf.deb ... Unpacking libsystemd0:armhf (234-2ubuntu8) over (232-21ubuntu3) ... Setting up libsystemd0:armhf (234-2ubuntu8) ... (Reading database ... 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Installing new version of config file /etc/systemd/resolved.conf ... Created symlink /etc/systemd/system/dbus-org.freedesktop.resolve1.service -> /lib/systemd/system/systemd-resolved.service. Created symlink /etc/systemd/system/multi-user.target.wants/systemd-resolved.service -> /lib/systemd/system/systemd-resolved.service. Created symlink /etc/systemd/system/dbus-org.freedesktop.network1.service -> /lib/systemd/system/systemd-networkd.service. Created symlink /etc/systemd/system/multi-user.target.wants/systemd-networkd.service -> /lib/systemd/system/systemd-networkd.service. Created symlink /etc/systemd/system/sockets.target.wants/systemd-networkd.socket -> /lib/systemd/system/systemd-networkd.socket. Created symlink /etc/systemd/system/network-online.target.wants/systemd-networkd-wait-online.service -> /lib/systemd/system/systemd-networkd-wait-online.service. addgroup: The group `systemd-journal' already exists as a system group. Exiting. Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.hostname1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.locale1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.login1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.network1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.resolve1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.systemd1.conf ... Removing obsolete conffile /etc/dbus-1/system.d/org.freedesktop.timedate1.conf ... (Reading database ... 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Unpacking dpkg-dev (1.18.24ubuntu1) over (1.18.23ubuntu4) ... Preparing to unpack .../26-libdpkg-perl_1.18.24ubuntu1_all.deb ... Unpacking libdpkg-perl (1.18.24ubuntu1) over (1.18.23ubuntu4) ... Selecting previously unselected package libasan4:armhf. Preparing to unpack .../27-libasan4_7.2.0-1ubuntu1_armhf.deb ... Unpacking libasan4:armhf (7.2.0-1ubuntu1) ... Selecting previously unselected package libcilkrts5:armhf. Preparing to unpack .../28-libcilkrts5_7.2.0-1ubuntu1_armhf.deb ... Unpacking libcilkrts5:armhf (7.2.0-1ubuntu1) ... Selecting previously unselected package libgcc-7-dev:armhf. Preparing to unpack .../29-libgcc-7-dev_7.2.0-1ubuntu1_armhf.deb ... Unpacking libgcc-7-dev:armhf (7.2.0-1ubuntu1) ... Selecting previously unselected package gcc-7. Preparing to unpack .../30-gcc-7_7.2.0-1ubuntu1_armhf.deb ... Unpacking gcc-7 (7.2.0-1ubuntu1) ... Preparing to unpack .../31-gcc_4%3a7.1.0-1ubuntu3_armhf.deb ... Removing old gcc doc directory. 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Setting up libpng16-16:armhf (1.6.31-1) ... Setting up libldap-common (2.4.45+dfsg-1ubuntu1) ... Setting up libcilkrts5:armhf (7.2.0-1ubuntu1) ... Setting up libpsl5:armhf (0.18.0-2) ... Setting up multiarch-support (2.24-12ubuntu1) ... Setting up tzdata (2017b-2) ... Current default time zone: 'Etc/UTC' Local time is now: Tue Aug 22 21:11:48 UTC 2017. Universal Time is now: Tue Aug 22 21:11:48 UTC 2017. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up systemd-sysv (234-2ubuntu8) ... Setting up libubsan0:armhf (7.2.0-1ubuntu1) ... Setting up gcc-6-base:armhf (6.4.0-4ubuntu1) ... Setting up libsasl2-modules-db:armhf (2.1.27~101-g0780600+dfsg-3ubuntu1) ... Setting up linux-libc-dev:armhf (4.12.0-12.13) ... Setting up advancecomp (2.0-1) ... Setting up libsasl2-2:armhf (2.1.27~101-g0780600+dfsg-3ubuntu1) ... Setting up libroken18-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up perl-modules-5.26 (5.26.0-5) ... Setting up libkrb5support0:armhf (1.15.1-2) ... Setting up libgcc-7-dev:armhf (7.2.0-1ubuntu1) ... Setting up cpp-7 (7.2.0-1ubuntu1) ... Processing triggers for libc-bin (2.24-12ubuntu1) ... Setting up libperl5.26:armhf (5.26.0-5) ... Setting up xz-utils (5.2.2-1.3) ... Setting up libheimbase1-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up openssl (1.0.2g-1ubuntu13) ... Setting up libsqlite3-0:armhf (3.19.3-3) ... Setting up dmsetup (2:1.02.137-2ubuntu3) ... Setting up binutils (2.29-5ubuntu1) ... Setting up cpp-6 (6.4.0-4ubuntu1) ... Setting up libc-dev-bin (2.24-12ubuntu1) ... Setting up ca-certificates (20170717) ... Updating certificates in /etc/ssl/certs... 7 added, 32 removed; done. Setting up libc6-dev:armhf (2.24-12ubuntu1) ... Setting up libassuan0:armhf (2.4.3-3) ... Setting up libusb-0.1-4:armhf (2:0.1.12-31) ... Setting up cpp (4:7.1.0-1ubuntu3) ... Setting up libk5crypto3:armhf (1.15.1-2) ... Setting up libasan3:armhf (6.4.0-4ubuntu1) ... Setting up libgcc-6-dev:armhf (6.4.0-4ubuntu1) ... Setting up libstdc++-6-dev:armhf (6.4.0-4ubuntu1) ... Setting up libwind0-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up gcc-7 (7.2.0-1ubuntu1) ... Setting up init (1.49) ... Setting up libasn1-8-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up libhcrypto4-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up gcc (4:7.1.0-1ubuntu3) ... Setting up libhx509-5-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up gcc-6 (6.4.0-4ubuntu1) ... Setting up g++-6 (6.4.0-4ubuntu1) ... Setting up libstdc++-7-dev:armhf (7.2.0-1ubuntu1) ... Setting up perl (5.26.0-5) ... Removing obsolete conffile /etc/perl/sitecustomize.pl ... Setting up libkrb5-3:armhf (1.15.1-2) ... Setting up libkrb5-26-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up libheimntlm0-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up g++-7 (7.2.0-1ubuntu1) ... Setting up libdpkg-perl (1.18.24ubuntu1) ... Setting up libgssapi-krb5-2:armhf (1.15.1-2) ... Setting up dpkg-dev (1.18.24ubuntu1) ... Setting up g++ (4:7.1.0-1ubuntu3) ... Setting up libgssapi3-heimdal:armhf (7.4.0.dfsg.1-2) ... Setting up libldap-2.4-2:armhf (2.4.45+dfsg-1ubuntu1) ... Setting up libcurl3-gnutls:armhf (7.55.0-1ubuntu1) ... Setting up apt-transport-https (1.5~beta2) ... Processing triggers for libc-bin (2.24-12ubuntu1) ... Processing triggers for ca-certificates (20170717) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-13282669', 'armhf', 'artful-proposed', '-c', 'chroot:autobuild', '--arch=armhf', '--dist=artful-proposed', '--purge=never', '--nolog', 'plastimatch_1.6.5+dfsg.1-1build4.dsc'] Initiating build PACKAGEBUILD-13282669 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-92-generic #115-Ubuntu SMP Thu Aug 10 09:10:33 UTC 2017 armv7l sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos01-arm64-013.buildd +==============================================================================+ | plastimatch 1.6.5+dfsg.1-1build4 (armhf) 22 Aug 2017 21:11 | +==============================================================================+ Package: plastimatch Version: 1.6.5+dfsg.1-1build4 Source Version: 1.6.5+dfsg.1-1build4 Distribution: artful-proposed Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf I: NOTICE: Log filtering will replace 'build/plastimatch-E15Deo/plastimatch-1.6.5+dfsg.1' with '<>' I: NOTICE: Log filtering will replace 'build/plastimatch-E15Deo' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-13282669/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- plastimatch_1.6.5+dfsg.1-1build4.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-9myP_O/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-9myP_O/apt_archive ./ InRelease Get:2 copy:/<>/resolver-9myP_O/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-9myP_O/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-9myP_O/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-9myP_O/apt_archive ./ Packages [527 B] Fetched 2860 B in 0s (137 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: g++-6 libperl5.24 libstdc++-6-dev perl-modules-5.24 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 778 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-9myP_O/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [778 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 778 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15046 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 10), cmake, libblas-dev, libdcmtk-dev, libdlib-dev, libfftw3-dev, libgdcm2-dev, libinsighttoolkit4-dev, liblapack-dev, libpng-dev, libsqlite3-dev, libtiff-dev, uuid-dev, zlib1g-dev Filtered Build-Depends: debhelper (>= 10), cmake, libblas-dev, libdcmtk-dev, libdlib-dev, libfftw3-dev, libgdcm2-dev, libinsighttoolkit4-dev, liblapack-dev, libpng-dev, libsqlite3-dev, libtiff-dev, uuid-dev, zlib1g-dev dpkg-deb: building package 'sbuild-build-depends-plastimatch-dummy' in '/<>/resolver-XhNhT2/apt_archive/sbuild-build-depends-plastimatch-dummy.deb'. Ign:1 copy:/<>/resolver-XhNhT2/apt_archive ./ InRelease Get:2 copy:/<>/resolver-XhNhT2/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-XhNhT2/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-XhNhT2/apt_archive ./ Sources [287 B] Get:5 copy:/<>/resolver-XhNhT2/apt_archive ./ Packages [605 B] Fetched 3011 B in 0s (138 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install plastimatch build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: g++-6 libperl5.24 perl-modules-5.24 Use 'sudo apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base gfortran gfortran-7 groff-base hdf5-helpers icu-devtools intltool-debian libaec-dev libaec0 libarchive-zip-perl libarchive13 libblas-common libblas-dev libblas3 libbsd0 libcharls-dev libcharls1 libcroco3 libcurl3 libdcmtk-dev libdcmtk12 libdlib-data libdlib-dev libdlib18 libdouble-conversion-dev libdouble-conversion1 libexpat1 libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-single3 libfile-stripnondeterminism-perl libgdcm2-dev libgdcm2.8 libgfortran-7-dev libgfortran4 libglib2.0-0 libhdf5-100 libhdf5-cpp-100 libhdf5-dev libicu-dev libicu57 libinsighttoolkit4-dev libinsighttoolkit4.12 libjbig-dev libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjson-c3 libjsoncpp1 liblapack-dev liblapack3 liblzma-dev liblzo2-2 libmagic-mgc libmagic1 libnifti-dev libnifti2 libopenjp2-7 libpipeline1 libpng-dev librhash0 libsigsegv2 libsocket++1 libsqlite3-dev libssl-dev libsz2 libtiff5 libtiff5-dev libtiffxx5 libtimedate-perl libtool libuv1 libwrap0 libwrap0-dev libxml2 libxml2-dev m4 man-db po-debconf uuid-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation ninja-build dh-make gettext-doc libasprintf-dev libgettextpo-dev gfortran-multilib gfortran-doc gfortran-7-multilib gfortran-7-doc libgfortran4-dbg libcoarrays-dev groff lrzip liblapack-doc dcmtk-doc libfftw3-doc libhdf5-doc icu-doc insighttoolkit4-examples liblzma-doc sqlite3-doc libtool-doc gcj-jdk pkg-config m4-doc less www-browser libmail-box-perl Recommended packages: curl | wget | lynx-cur libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libpng-tools libssl-doc libltdl-dev tcpd xml-core libmail-sendmail-perl The following packages will be REMOVED: pkg-create-dbgsym* The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base gfortran gfortran-7 groff-base hdf5-helpers icu-devtools intltool-debian libaec-dev libaec0 libarchive-zip-perl libarchive13 libblas-common libblas-dev libblas3 libbsd0 libcharls-dev libcharls1 libcroco3 libcurl3 libdcmtk-dev libdcmtk12 libdlib-data libdlib-dev libdlib18 libdouble-conversion-dev libdouble-conversion1 libexpat1 libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-single3 libfile-stripnondeterminism-perl libgdcm2-dev libgdcm2.8 libgfortran-7-dev libgfortran4 libglib2.0-0 libhdf5-100 libhdf5-cpp-100 libhdf5-dev libicu-dev libicu57 libinsighttoolkit4-dev libinsighttoolkit4.12 libjbig-dev libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjson-c3 libjsoncpp1 liblapack-dev liblapack3 liblzma-dev liblzo2-2 libmagic-mgc libmagic1 libnifti-dev libnifti2 libopenjp2-7 libpipeline1 libpng-dev librhash0 libsigsegv2 libsocket++1 libsqlite3-dev libssl-dev libsz2 libtiff5 libtiff5-dev libtiffxx5 libtimedate-perl libtool libuv1 libwrap0 libwrap0-dev libxml2 libxml2-dev m4 man-db po-debconf sbuild-build-depends-plastimatch-dummy uuid-dev zlib1g-dev 0 upgraded, 99 newly installed, 1 to remove and 0 not upgraded. Need to get 158 MB of archives. After this operation, 526 MB of additional disk space will be used. Get:1 copy:/<>/resolver-XhNhT2/apt_archive ./ sbuild-build-depends-plastimatch-dummy 0.invalid.0 [860 B] Get:2 http://ftpmaster.internal/ubuntu artful/main armhf groff-base armhf 1.22.3-9 [1013 kB] Get:3 http://ftpmaster.internal/ubuntu artful/main armhf libbsd0 armhf 0.8.6-1 [50.6 kB] Get:4 http://ftpmaster.internal/ubuntu artful/main armhf bsdmainutils armhf 9.0.12+nmu1ubuntu1 [173 kB] Get:5 http://ftpmaster.internal/ubuntu artful/main armhf libpipeline1 armhf 1.4.2-1 [21.0 kB] Get:6 http://ftpmaster.internal/ubuntu artful/main armhf man-db armhf 2.7.6.1-2 [873 kB] Get:7 http://ftpmaster.internal/ubuntu artful-proposed/main armhf cmake-data all 3.9.1-1 [1276 kB] Get:8 http://ftpmaster.internal/ubuntu artful/main armhf liblzo2-2 armhf 2.08-1.2 [44.2 kB] Get:9 http://ftpmaster.internal/ubuntu artful/main armhf libicu57 armhf 57.1-6 [7442 kB] Get:10 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libxml2 armhf 2.9.4+dfsg1-3.1 [553 kB] Get:11 http://ftpmaster.internal/ubuntu artful/main armhf libarchive13 armhf 3.2.2-2 [254 kB] Get:12 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libcurl3 armhf 7.55.0-1ubuntu1 [166 kB] Get:13 http://ftpmaster.internal/ubuntu artful/main armhf libexpat1 armhf 2.2.3-1 [53.5 kB] Get:14 http://ftpmaster.internal/ubuntu artful/main armhf libjsoncpp1 armhf 1.7.4-3 [65.9 kB] Get:15 http://ftpmaster.internal/ubuntu artful/main armhf librhash0 armhf 1.3.4-3 [87.1 kB] Get:16 http://ftpmaster.internal/ubuntu artful/main armhf libuv1 armhf 1.9.1-3 [48.7 kB] Get:17 http://ftpmaster.internal/ubuntu artful-proposed/main armhf cmake armhf 3.9.1-1 [2595 kB] Get:18 http://ftpmaster.internal/ubuntu artful/main armhf libjpeg-turbo8 armhf 1.5.1-0ubuntu1 [89.9 kB] Get:19 http://ftpmaster.internal/ubuntu artful/main armhf libjbig0 armhf 2.1-3.1 [24.3 kB] Get:20 http://ftpmaster.internal/ubuntu artful/main armhf libmagic-mgc armhf 1:5.31-1 [182 kB] Get:21 http://ftpmaster.internal/ubuntu artful/main armhf libmagic1 armhf 1:5.31-1 [62.4 kB] Get:22 http://ftpmaster.internal/ubuntu artful/main armhf file armhf 1:5.31-1 [21.6 kB] Get:23 http://ftpmaster.internal/ubuntu artful/main armhf libjson-c3 armhf 0.12.1-1.1 [20.0 kB] Get:24 http://ftpmaster.internal/ubuntu artful/main armhf gettext-base armhf 0.19.8.1-2ubuntu2 [45.1 kB] Get:25 http://ftpmaster.internal/ubuntu artful/main armhf libglib2.0-0 armhf 2.53.4-3ubuntu1 [994 kB] Get:26 http://ftpmaster.internal/ubuntu artful/main armhf libsigsegv2 armhf 2.11-1 [12.6 kB] Get:27 http://ftpmaster.internal/ubuntu artful/main armhf m4 armhf 1.4.18-1 [181 kB] Get:28 http://ftpmaster.internal/ubuntu artful/main armhf autoconf all 2.69-11 [322 kB] Get:29 http://ftpmaster.internal/ubuntu artful/main armhf autotools-dev all 20161112.1 [39.5 kB] Get:30 http://ftpmaster.internal/ubuntu artful/main armhf automake all 1:1.15-6ubuntu1 [509 kB] Get:31 http://ftpmaster.internal/ubuntu artful/main armhf autopoint all 0.19.8.1-2ubuntu2 [411 kB] Get:32 http://ftpmaster.internal/ubuntu artful/main armhf libtool all 2.4.6-2 [194 kB] Get:33 http://ftpmaster.internal/ubuntu artful/main armhf dh-autoreconf all 14 [15.5 kB] Get:34 http://ftpmaster.internal/ubuntu artful/main armhf libarchive-zip-perl all 1.59-1 [84.0 kB] Get:35 http://ftpmaster.internal/ubuntu artful/main armhf libfile-stripnondeterminism-perl all 0.038-1 [13.3 kB] Get:36 http://ftpmaster.internal/ubuntu artful/main armhf libtimedate-perl all 2.3000-2 [37.5 kB] Get:37 http://ftpmaster.internal/ubuntu artful/main armhf dh-strip-nondeterminism all 0.038-1 [5026 B] Get:38 http://ftpmaster.internal/ubuntu artful/main armhf libcroco3 armhf 0.6.12-1 [69.7 kB] Get:39 http://ftpmaster.internal/ubuntu artful/main armhf gettext armhf 0.19.8.1-2ubuntu2 [1018 kB] Get:40 http://ftpmaster.internal/ubuntu artful/main armhf intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:41 http://ftpmaster.internal/ubuntu artful/main armhf po-debconf all 1.0.20 [232 kB] Get:42 http://ftpmaster.internal/ubuntu artful/main armhf debhelper all 10.7.2ubuntu2 [877 kB] Get:43 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libgfortran4 armhf 7.2.0-1ubuntu1 [195 kB] Get:44 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libgfortran-7-dev armhf 7.2.0-1ubuntu1 [243 kB] Get:45 http://ftpmaster.internal/ubuntu artful-proposed/main armhf gfortran-7 armhf 7.2.0-1ubuntu1 [30.1 MB] Get:46 http://ftpmaster.internal/ubuntu artful/main armhf gfortran armhf 4:7.1.0-1ubuntu3 [1272 B] Get:47 http://ftpmaster.internal/ubuntu artful/universe armhf hdf5-helpers armhf 1.10.0-patch1+docs-4 [12.3 kB] Get:48 http://ftpmaster.internal/ubuntu artful/main armhf icu-devtools armhf 57.1-6 [148 kB] Get:49 http://ftpmaster.internal/ubuntu artful/universe armhf libaec0 armhf 0.3.2-2 [19.7 kB] Get:50 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libblas-common armhf 3.7.1-1ubuntu4 [5846 B] Get:51 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libblas3 armhf 3.7.1-1ubuntu4 [89.4 kB] Get:52 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libblas-dev armhf 3.7.1-1ubuntu4 [98.3 kB] Get:53 http://ftpmaster.internal/ubuntu artful/universe armhf libcharls1 armhf 1.1.0+dfsg-2 [48.2 kB] Get:54 http://ftpmaster.internal/ubuntu artful/universe armhf libcharls-dev armhf 1.1.0+dfsg-2 [20.4 kB] Get:55 http://ftpmaster.internal/ubuntu artful/main armhf libicu-dev armhf 57.1-6 [15.8 MB] Get:56 http://ftpmaster.internal/ubuntu artful-proposed/main armhf libxml2-dev armhf 2.9.4+dfsg1-3.1 [665 kB] Get:57 http://ftpmaster.internal/ubuntu artful-proposed/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-0ubuntu2 [168 kB] Get:58 http://ftpmaster.internal/ubuntu artful/main armhf libssl-dev armhf 1.0.2g-1ubuntu13 [980 kB] Get:59 http://ftpmaster.internal/ubuntu artful/main armhf libpng-dev armhf 1.6.31-1 [128 kB] Get:60 http://ftpmaster.internal/ubuntu artful/main armhf libwrap0 armhf 7.6.q-26 [43.8 kB] Get:61 http://ftpmaster.internal/ubuntu artful/main armhf libwrap0-dev armhf 7.6.q-26 [19.1 kB] Get:62 http://ftpmaster.internal/ubuntu artful/main armhf libjbig-dev armhf 2.1-3.1 [22.5 kB] Get:63 http://ftpmaster.internal/ubuntu artful/main armhf libjpeg-turbo8-dev armhf 1.5.1-0ubuntu1 [226 kB] Get:64 http://ftpmaster.internal/ubuntu artful/main armhf libjpeg8 armhf 8c-2ubuntu8 [2202 B] Get:65 http://ftpmaster.internal/ubuntu artful/main armhf libjpeg8-dev armhf 8c-2ubuntu8 [1554 B] Get:66 http://ftpmaster.internal/ubuntu artful/main armhf libjpeg-dev armhf 8c-2ubuntu8 [1554 B] Get:67 http://ftpmaster.internal/ubuntu artful-proposed/main armhf liblzma-dev armhf 5.2.2-1.3 [138 kB] Get:68 http://ftpmaster.internal/ubuntu artful/main armhf libtiff5 armhf 4.0.8-4 [133 kB] Get:69 http://ftpmaster.internal/ubuntu artful/main armhf libtiffxx5 armhf 4.0.8-4 [5746 B] Get:70 http://ftpmaster.internal/ubuntu artful/main armhf libtiff5-dev armhf 4.0.8-4 [255 kB] Get:71 http://ftpmaster.internal/ubuntu artful-proposed/universe armhf libdcmtk12 armhf 3.6.2-2 [3746 kB] Get:72 http://ftpmaster.internal/ubuntu artful-proposed/universe armhf libdcmtk-dev armhf 3.6.2-2 [908 kB] Get:73 http://ftpmaster.internal/ubuntu artful/universe armhf libdlib-data all 18.18-2 [63.3 MB] Get:74 http://ftpmaster.internal/ubuntu artful/universe armhf libdlib18 armhf 18.18-2 [228 kB] Get:75 http://ftpmaster.internal/ubuntu artful/universe armhf libdlib-dev armhf 18.18-2 [1370 kB] Get:76 http://ftpmaster.internal/ubuntu artful/main armhf libexpat1-dev armhf 2.2.3-1 [102 kB] Get:77 http://ftpmaster.internal/ubuntu artful/main armhf libfftw3-double3 armhf 3.3.6p2-1 [430 kB] Get:78 http://ftpmaster.internal/ubuntu artful/main armhf libfftw3-single3 armhf 3.3.6p2-1 [709 kB] Get:79 http://ftpmaster.internal/ubuntu artful/main armhf libfftw3-bin armhf 3.3.6p2-1 [24.9 kB] Get:80 http://ftpmaster.internal/ubuntu artful/main armhf libfftw3-dev armhf 3.3.6p2-1 [1126 kB] Get:81 http://ftpmaster.internal/ubuntu artful/universe armhf libopenjp2-7 armhf 2.1.2-1.3 [96.3 kB] Get:82 http://ftpmaster.internal/ubuntu artful/universe armhf libsocket++1 armhf 1.12.13-8wily1 [33.7 kB] Get:83 http://ftpmaster.internal/ubuntu artful-proposed/universe armhf libgdcm2.8 armhf 2.8.2-3build1 [1605 kB] Get:84 http://ftpmaster.internal/ubuntu artful-proposed/universe armhf libgdcm2-dev armhf 2.8.2-3build1 [253 kB] Get:85 http://ftpmaster.internal/ubuntu artful/universe armhf libsz2 armhf 0.3.2-2 [5100 B] Get:86 http://ftpmaster.internal/ubuntu artful/universe armhf libhdf5-100 armhf 1.10.0-patch1+docs-4 [1167 kB] Get:87 http://ftpmaster.internal/ubuntu artful/universe armhf libhdf5-cpp-100 armhf 1.10.0-patch1+docs-4 [92.1 kB] Get:88 http://ftpmaster.internal/ubuntu artful/universe armhf libaec-dev armhf 0.3.2-2 [17.5 kB] Get:89 http://ftpmaster.internal/ubuntu artful/universe armhf libhdf5-dev armhf 1.10.0-patch1+docs-4 [2317 kB] Get:90 http://ftpmaster.internal/ubuntu artful/main armhf libdouble-conversion1 armhf 2.0.1-4ubuntu1 [32.9 kB] Get:91 http://ftpmaster.internal/ubuntu artful/universe armhf libnifti2 armhf 2.0.0-2 [89.9 kB] Get:92 http://ftpmaster.internal/ubuntu artful-proposed/universe armhf libinsighttoolkit4.12 armhf 4.12.0-dfsg1-2ubuntu1 [3596 kB] Get:93 http://ftpmaster.internal/ubuntu artful/main armhf libdouble-conversion-dev armhf 2.0.1-4ubuntu1 [47.9 kB] Get:94 http://ftpmaster.internal/ubuntu artful/universe armhf libnifti-dev armhf 2.0.0-2 [118 kB] Get:95 http://ftpmaster.internal/ubuntu artful-proposed/universe armhf libinsighttoolkit4-dev armhf 4.12.0-dfsg1-2ubuntu1 [2852 kB] Get:96 http://ftpmaster.internal/ubuntu artful-proposed/main armhf liblapack3 armhf 3.7.1-1ubuntu4 [1517 kB] Get:97 http://ftpmaster.internal/ubuntu artful-proposed/main armhf liblapack-dev armhf 3.7.1-1ubuntu4 [1561 kB] Get:98 http://ftpmaster.internal/ubuntu artful/main armhf libsqlite3-dev armhf 3.19.3-3 [562 kB] Get:99 http://ftpmaster.internal/ubuntu artful/main armhf uuid-dev armhf 2.30.1-0ubuntu3 [26.5 kB] debconf: delaying package configuration, since 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Unpacking uuid-dev:armhf (2.30.1-0ubuntu3) ... Selecting previously unselected package sbuild-build-depends-plastimatch-dummy. Preparing to unpack .../98-sbuild-build-depends-plastimatch-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-plastimatch-dummy (0.invalid.0) ... Setting up libdlib-data (18.18-2) ... Setting up libaec0:armhf (0.3.2-2) ... Setting up libexpat1:armhf (2.2.3-1) ... Setting up libopenjp2-7:armhf (2.1.2-1.3) ... Setting up libnifti2 (2.0.0-2) ... Setting up libarchive-zip-perl (1.59-1) ... Setting up libdouble-conversion1:armhf (2.0.1-4ubuntu1) ... Setting up libgfortran4:armhf (7.2.0-1ubuntu1) ... Setting up libsqlite3-dev:armhf (3.19.3-3) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libjbig0:armhf (2.1-3.1) ... Setting up libsigsegv2:armhf (2.11-1) ... Setting up libcurl3:armhf (7.55.0-1ubuntu1) ... Setting up libuv1:armhf (1.9.1-3) ... Setting up libblas-common (3.7.1-1ubuntu4) ... Setting up libjson-c3:armhf (0.12.1-1.1) ... Setting up libcharls1:armhf (1.1.0+dfsg-2) ... Setting up groff-base (1.22.3-9) ... Setting up libglib2.0-0:armhf (2.53.4-3ubuntu1) ... No schema files found: doing nothing. Setting up uuid-dev:armhf (2.30.1-0ubuntu3) ... Setting up libsocket++1:armhf (1.12.13-8wily1) ... Setting up gettext-base (0.19.8.1-2ubuntu2) ... Setting up cmake-data (3.9.1-1) ... Setting up libjpeg-turbo8:armhf (1.5.1-0ubuntu1) ... Setting up libpipeline1:armhf (1.4.2-1) ... Setting up m4 (1.4.18-1) ... Setting up libfftw3-double3:armhf (3.3.6p2-1) ... Setting up libicu57:armhf (57.1-6) ... Setting up libbsd0:armhf (0.8.6-1) ... Setting up libxml2:armhf (2.9.4+dfsg1-3.1) ... Setting up libmagic-mgc (1:5.31-1) ... Setting up libmagic1:armhf (1:5.31-1) ... Setting up librhash0 (1.3.4-3) ... Setting up libjbig-dev:armhf (2.1-3.1) ... Setting up libcroco3:armhf (0.6.12-1) ... Setting up libnifti-dev (2.0.0-2) ... Setting up libblas3 (3.7.1-1ubuntu4) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up libjpeg-turbo8-dev:armhf (1.5.1-0ubuntu1) ... Processing triggers for libc-bin (2.24-12ubuntu1) ... Setting up autotools-dev (20161112.1) ... Setting up libgdcm2.8:armhf (2.8.2-3build1) ... Setting up libcharls-dev:armhf (1.1.0+dfsg-2) ... Setting up libgfortran-7-dev:armhf (7.2.0-1ubuntu1) ... Setting up libexpat1-dev:armhf (2.2.3-1) ... Setting up libfftw3-single3:armhf (3.3.6p2-1) ... Setting up gfortran-7 (7.2.0-1ubuntu1) ... Setting up icu-devtools (57.1-6) ... Setting up liblzma-dev:armhf (5.2.2-1.3) ... Setting up bsdmainutils (9.0.12+nmu1ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up hdf5-helpers (1.10.0-patch1+docs-4) ... Setting up autopoint (0.19.8.1-2ubuntu2) ... Setting up liblzo2-2:armhf (2.08-1.2) ... Setting up libwrap0:armhf (7.6.q-26) ... Setting up libsz2:armhf (0.3.2-2) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-0ubuntu2) ... Setting up libfile-stripnondeterminism-perl (0.038-1) ... Setting up libjpeg8:armhf (8c-2ubuntu8) ... Setting up libjsoncpp1:armhf (1.7.4-3) ... Setting up gfortran (4:7.1.0-1ubuntu3) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libfftw3-bin (3.3.6p2-1) ... Setting up libdouble-conversion-dev:armhf (2.0.1-4ubuntu1) ... Setting up libhdf5-100:armhf (1.10.0-patch1+docs-4) ... Setting up libwrap0-dev:armhf (7.6.q-26) ... Setting up gettext (0.19.8.1-2ubuntu2) ... Setting up libblas-dev (3.7.1-1ubuntu4) ... update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode Setting up libarchive13:armhf (3.2.2-2) ... Setting up libssl-dev:armhf (1.0.2g-1ubuntu13) ... Setting up liblapack3 (3.7.1-1ubuntu4) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up libaec-dev:armhf (0.3.2-2) ... Setting up libtiff5:armhf (4.0.8-4) ... Setting up autoconf (2.69-11) ... Setting up libicu-dev (57.1-6) ... Setting up libgdcm2-dev (2.8.2-3build1) ... Setting up file (1:5.31-1) ... Setting up libdlib18 (18.18-2) ... Setting up libxml2-dev:armhf (2.9.4+dfsg1-3.1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libjpeg8-dev:armhf (8c-2ubuntu8) ... Setting up libjpeg-dev:armhf (8c-2ubuntu8) ... Setting up libfftw3-dev:armhf (3.3.6p2-1) ... Setting up automake (1:1.15-6ubuntu1) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up libdcmtk12 (3.6.2-2) ... Setting up libtiffxx5:armhf (4.0.8-4) ... Setting up libdlib-dev (18.18-2) ... Setting up man-db (2.7.6.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libpng-dev:armhf (1.6.31-1) ... Setting up cmake (3.9.1-1) ... Setting up liblapack-dev (3.7.1-1ubuntu4) ... update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode Setting up libtool (2.4.6-2) ... Setting up libhdf5-cpp-100:armhf (1.10.0-patch1+docs-4) ... Setting up po-debconf (1.0.20) ... Setting up libinsighttoolkit4.12 (4.12.0-dfsg1-2ubuntu1) ... Setting up libtiff5-dev:armhf (4.0.8-4) ... Setting up libhdf5-dev (1.10.0-patch1+docs-4) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libdcmtk-dev (3.6.2-2) ... Setting up libinsighttoolkit4-dev (4.12.0-dfsg1-2ubuntu1) ... Setting up dh-autoreconf (14) ... Setting up debhelper (10.7.2ubuntu2) ... Setting up sbuild-build-depends-plastimatch-dummy (0.invalid.0) ... Setting up dh-strip-nondeterminism (0.038-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 26877 files and directories currently installed.) Purging configuration files for pkg-create-dbgsym (0.73) ... Processing triggers for libc-bin (2.24-12ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-92-generic arm64 (armv7l) Toolchain package versions: binutils_2.29-5ubuntu1 dpkg-dev_1.18.24ubuntu1 g++-6_6.4.0-4ubuntu1 g++-7_7.2.0-1ubuntu1 gcc-6_6.4.0-4ubuntu1 gcc-7_7.2.0-1ubuntu1 libc6-dev_2.24-12ubuntu1 libstdc++-6-dev_6.4.0-4ubuntu1 libstdc++-7-dev_7.2.0-1ubuntu1 libstdc++6_7.2.0-1ubuntu1 linux-libc-dev_4.12.0-12.13 Package versions: adduser_3.113+nmu3ubuntu5 advancecomp_2.0-1 apt_1.5~beta2 apt-transport-https_1.5~beta2 autoconf_2.69-11 automake_1:1.15-6ubuntu1 autopoint_0.19.8.1-2ubuntu2 autotools-dev_20161112.1 base-files_9.6ubuntu101 base-passwd_3.5.43 bash_4.4-5ubuntu1 binutils_2.29-5ubuntu1 bsdmainutils_9.0.12+nmu1ubuntu1 bsdutils_1:2.30.1-0ubuntu3 build-essential_12.1ubuntu2 bzip2_1.0.6-8.1 ca-certificates_20170717 cmake_3.9.1-1 cmake-data_3.9.1-1 coreutils_8.26-3ubuntu3 cpp_4:7.1.0-1ubuntu3 cpp-6_6.4.0-4ubuntu1 cpp-7_7.2.0-1ubuntu1 dash_0.5.8-2.3ubuntu1 debconf_1.5.63 debhelper_10.7.2ubuntu2 debianutils_4.8.2 dh-autoreconf_14 dh-strip-nondeterminism_0.038-1 diffutils_1:3.6-1 dmsetup_2:1.02.137-2ubuntu3 dpkg_1.18.24ubuntu1 dpkg-dev_1.18.24ubuntu1 e2fslibs_1.43.5-1 e2fsprogs_1.43.5-1 fakeroot_1.21-1ubuntu2 file_1:5.31-1 findutils_4.6.0+git+20170729-2 g++_4:7.1.0-1ubuntu3 g++-6_6.4.0-4ubuntu1 g++-7_7.2.0-1ubuntu1 gcc_4:7.1.0-1ubuntu3 gcc-6_6.4.0-4ubuntu1 gcc-6-base_6.4.0-4ubuntu1 gcc-7_7.2.0-1ubuntu1 gcc-7-base_7.2.0-1ubuntu1 gettext_0.19.8.1-2ubuntu2 gettext-base_0.19.8.1-2ubuntu2 gfortran_4:7.1.0-1ubuntu3 gfortran-7_7.2.0-1ubuntu1 gnupg_2.1.15-1ubuntu7 gnupg-agent_2.1.15-1ubuntu7 gpgv_2.1.15-1ubuntu7 grep_3.1-2 groff-base_1.22.3-9 gzip_1.6-5ubuntu1 hdf5-helpers_1.10.0-patch1+docs-4 hostname_3.18 icu-devtools_57.1-6 init_1.49 init-system-helpers_1.49 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3build1 libaec-dev_0.3.2-2 libaec0_0.3.2-2 libapparmor1_2.11.0-2ubuntu16 libapt-pkg5.0_1.5~beta2 libarchive-zip-perl_1.59-1 libarchive13_3.2.2-2 libasan3_6.4.0-4ubuntu1 libasan4_7.2.0-1ubuntu1 libasn1-8-heimdal_7.4.0.dfsg.1-2 libassuan0_2.4.3-3 libatomic1_7.2.0-1ubuntu1 libattr1_1:2.4.47-2build1 libaudit-common_1:2.7.7-1ubuntu2 libaudit1_1:2.7.7-1ubuntu2 libblas-common_3.7.1-1ubuntu4 libblas-dev_3.7.1-1ubuntu4 libblas3_3.7.1-1ubuntu4 libblkid1_2.30.1-0ubuntu3 libbsd0_0.8.6-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.24-12ubuntu1 libc-dev-bin_2.24-12ubuntu1 libc6_2.24-12ubuntu1 libc6-dev_2.24-12ubuntu1 libcap-ng0_0.7.7-3build1 libcap2_1:2.25-1 libcc1-0_7.2.0-1ubuntu1 libcharls-dev_1.1.0+dfsg-2 libcharls1_1.1.0+dfsg-2 libcilkrts5_7.2.0-1ubuntu1 libcomerr2_1.43.5-1 libcroco3_0.6.12-1 libcryptsetup4_2:1.7.2-0ubuntu4 libcurl3_7.55.0-1ubuntu1 libcurl3-gnutls_7.55.0-1ubuntu1 libdb5.3_5.3.28-13 libdcmtk-dev_3.6.2-2 libdcmtk12_3.6.2-2 libdebconfclient0_0.213ubuntu1 libdevmapper1.02.1_2:1.02.137-2ubuntu3 libdlib-data_18.18-2 libdlib-dev_18.18-2 libdlib18_18.18-2 libdouble-conversion-dev_2.0.1-4ubuntu1 libdouble-conversion1_2.0.1-4ubuntu1 libdpkg-perl_1.18.24ubuntu1 libexpat1_2.2.3-1 libexpat1-dev_2.2.3-1 libfakeroot_1.21-1ubuntu2 libfdisk1_2.30.1-0ubuntu3 libffi6_3.2.1-6 libfftw3-bin_3.3.6p2-1 libfftw3-dev_3.3.6p2-1 libfftw3-double3_3.3.6p2-1 libfftw3-single3_3.3.6p2-1 libfile-stripnondeterminism-perl_0.038-1 libgcc-6-dev_6.4.0-4ubuntu1 libgcc-7-dev_7.2.0-1ubuntu1 libgcc1_1:7.2.0-1ubuntu1 libgcrypt20_1.7.8-2 libgdbm3_1.8.3-14 libgdcm2-dev_2.8.2-3build1 libgdcm2.8_2.8.2-3build1 libgfortran-7-dev_7.2.0-1ubuntu1 libgfortran4_7.2.0-1ubuntu1 libglib2.0-0_2.53.4-3ubuntu1 libgmp10_2:6.1.2+dfsg-1 libgnutls30_3.5.8-6ubuntu2 libgomp1_7.2.0-1ubuntu1 libgpg-error0_1.27-3 libgssapi-krb5-2_1.15.1-2 libgssapi3-heimdal_7.4.0.dfsg.1-2 libhcrypto4-heimdal_7.4.0.dfsg.1-2 libhdf5-100_1.10.0-patch1+docs-4 libhdf5-cpp-100_1.10.0-patch1+docs-4 libhdf5-dev_1.10.0-patch1+docs-4 libheimbase1-heimdal_7.4.0.dfsg.1-2 libheimntlm0-heimdal_7.4.0.dfsg.1-2 libhogweed4_3.3-1 libhx509-5-heimdal_7.4.0.dfsg.1-2 libicu-dev_57.1-6 libicu57_57.1-6 libidn11_1.33-1 libidn2-0_2.0.2-3 libinsighttoolkit4-dev_4.12.0-dfsg1-2ubuntu1 libinsighttoolkit4.12_4.12.0-dfsg1-2ubuntu1 libip4tc0_1.6.1-2ubuntu1 libisl15_0.18-1 libjbig-dev_2.1-3.1 libjbig0_2.1-3.1 libjpeg-dev_8c-2ubuntu8 libjpeg-turbo8_1.5.1-0ubuntu1 libjpeg-turbo8-dev_1.5.1-0ubuntu1 libjpeg8_8c-2ubuntu8 libjpeg8-dev_8c-2ubuntu8 libjson-c3_0.12.1-1.1 libjsoncpp1_1.7.4-3 libk5crypto3_1.15.1-2 libkeyutils1_1.5.9-9ubuntu1 libkmod2_24-1ubuntu2 libkrb5-26-heimdal_7.4.0.dfsg.1-2 libkrb5-3_1.15.1-2 libkrb5support0_1.15.1-2 libksba8_1.3.5-2 liblapack-dev_3.7.1-1ubuntu4 liblapack3_3.7.1-1ubuntu4 libldap-2.4-2_2.4.45+dfsg-1ubuntu1 libldap-common_2.4.45+dfsg-1ubuntu1 liblockfile-bin_1.14-1 liblockfile1_1.14-1 liblz4-1_0.0~r131-2ubuntu2 liblzma-dev_5.2.2-1.3 liblzma5_5.2.2-1.3 liblzo2-2_2.08-1.2 libmagic-mgc_1:5.31-1 libmagic1_1:5.31-1 libmount1_2.30.1-0ubuntu3 libmpc3_1.0.3-1 libmpfr4_3.1.5-1 libncurses5_6.0+20160625-1ubuntu1 libncursesw5_6.0+20160625-1ubuntu1 libnettle6_3.3-1 libnifti-dev_2.0.0-2 libnifti2_2.0.0-2 libnpth0_1.5-2 libopenjp2-7_2.1.2-1.3 libp11-kit0_0.23.7-3 libpam-modules_1.1.8-3.2ubuntu3 libpam-modules-bin_1.1.8-3.2ubuntu3 libpam-runtime_1.1.8-3.2ubuntu3 libpam0g_1.1.8-3.2ubuntu3 libpcre3_2:8.39-4 libperl5.24_5.24.1-2ubuntu1 libperl5.26_5.26.0-5 libpipeline1_1.4.2-1 libpng-dev_1.6.31-1 libpng16-16_1.6.31-1 libprocps6_2:3.3.12-1ubuntu2 libpsl5_0.18.0-2 libreadline7_7.0-0ubuntu2 librhash0_1.3.4-3 libroken18-heimdal_7.4.0.dfsg.1-2 librtmp1_2.4+20151223.gitfa8646d.1-1 libsasl2-2_2.1.27~101-g0780600+dfsg-3ubuntu1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3ubuntu1 libseccomp2_2.3.1-2.1ubuntu1 libselinux1_2.6-3build2 libsemanage-common_2.6-2build2 libsemanage1_2.6-2build2 libsepol1_2.6-2 libsigsegv2_2.11-1 libslang2_2.3.1-5ubuntu1 libsmartcols1_2.30.1-0ubuntu3 libsocket++1_1.12.13-8wily1 libsqlite3-0_3.19.3-3 libsqlite3-dev_3.19.3-3 libss2_1.43.5-1 libssl-dev_1.0.2g-1ubuntu13 libssl1.0.0_1.0.2g-1ubuntu13 libstdc++-6-dev_6.4.0-4ubuntu1 libstdc++-7-dev_7.2.0-1ubuntu1 libstdc++6_7.2.0-1ubuntu1 libsystemd0_234-2ubuntu8 libsz2_0.3.2-2 libtasn1-6_4.12-2.1 libtiff5_4.0.8-4 libtiff5-dev_4.0.8-4 libtiffxx5_4.0.8-4 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160625-1ubuntu1 libtool_2.4.6-2 libubsan0_7.2.0-1ubuntu1 libudev1_234-2ubuntu8 libunistring0_0.9.3-5.2ubuntu1 libusb-0.1-4_2:0.1.12-31 libustr-1.0-1_1.0.4-6 libuuid1_2.30.1-0ubuntu3 libuv1_1.9.1-3 libwind0-heimdal_7.4.0.dfsg.1-2 libwrap0_7.6.q-26 libwrap0-dev_7.6.q-26 libxml2_2.9.4+dfsg1-3.1 libxml2-dev_2.9.4+dfsg1-3.1 linux-libc-dev_4.12.0-12.13 lockfile-progs_0.1.17build1 login_1:4.2-3.2ubuntu4 lsb-base_9.20160110ubuntu5 m4_1.4.18-1 make_4.1-9.1 man-db_2.7.6.1-2 mawk_1.3.3-17ubuntu2 mount_2.30.1-0ubuntu3 multiarch-support_2.24-12ubuntu1 ncurses-base_6.0+20160625-1ubuntu1 ncurses-bin_6.0+20160625-1ubuntu1 openssl_1.0.2g-1ubuntu13 optipng_0.7.6-1build1 passwd_1:4.2-3.2ubuntu4 patch_2.7.5-1build1 perl_5.26.0-5 perl-base_5.26.0-5 perl-modules-5.24_5.24.1-2ubuntu1 perl-modules-5.26_5.26.0-5 pinentry-curses_1.0.0-2 pkgbinarymangler_131 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.12-1ubuntu2 readline-common_7.0-0ubuntu2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-plastimatch-dummy_0.invalid.0 sed_4.4-1 sensible-utils_0.0.10 systemd_234-2ubuntu8 systemd-sysv_234-2ubuntu8 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.8git1 tar_1.29b-2 tzdata_2017b-2 ubuntu-keyring_2016.10.27 util-linux_2.30.1-0ubuntu3 uuid-dev_2.30.1-0ubuntu3 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 zlib1g-dev_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Tue Aug 22 21:09:07 2017 UTC gpgv: using RSA key gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./plastimatch_1.6.5+dfsg.1-1build4.dsc dpkg-source: info: extracting plastimatch in plastimatch-1.6.5+dfsg.1 dpkg-source: info: unpacking plastimatch_1.6.5+dfsg.1.orig.tar.gz dpkg-source: info: unpacking plastimatch_1.6.5+dfsg.1-1build4.debian.tar.xz dpkg-source: info: applying Fix-for-updated-dlib-configuration-in-Debian-unstabl.patch dpkg-source: info: applying Fix-missing-dependency-of-plmsys-library-depending-o.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/home/buildd LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd MAIL=/var/mail/buildd OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games PWD=/<>/plastimatch-1.6.5+dfsg.1 SHELL=/bin/sh SUDO_COMMAND=/usr/sbin/chroot /<> su buildd -s /bin/sh -c cd '/<>/plastimatch-1.6.5+dfsg.1' && 'env' SUDO_GID=2501 SUDO_UID=2001 SUDO_USER=buildd TERM=unknown USER=buildd USERNAME=root dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package plastimatch dpkg-buildpackage: info: source version 1.6.5+dfsg.1-1build4 dpkg-buildpackage: info: source distribution artful dpkg-source --before-build plastimatch-1.6.5+dfsg.1 dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean dh_auto_clean dh_autoreconf_clean dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1' dh_auto_configure -- -DCMAKE_PREFIX_PATH=/usr/lib/InsightToolkit -DCMAKE_BUILD_TYPE:STRING=RELEASE -DCMAKE_SKIP_RPATH:BOOL=ON -DPLM_CONFIG_DEBIAN_BUILD:BOOL=ON -DBUILD_SHARED_LIBS=ON -DBUILD_TESTING:BOOL=ON cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_PREFIX_PATH=/usr/lib/InsightToolkit -DCMAKE_BUILD_TYPE:STRING=RELEASE -DCMAKE_SKIP_RPATH:BOOL=ON -DPLM_CONFIG_DEBIAN_BUILD:BOOL=ON -DBUILD_SHARED_LIBS=ON -DBUILD_TESTING:BOOL=ON -- The C compiler identification is GNU 7.2.0 -- The CXX compiler identification is GNU 7.2.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of unsigned long -- Check size of unsigned long - done -- Check size of size_t -- Check size of size_t - done -- Machine is 32-bit -- Check if the system is big endian -- Searching 16 bit integer -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Checking host processor: armv7l -- Checking target processor: armv7l -- Checking epsilon: 2.22045E-16 2.22045E-16 2.22045E-16 -- Checking sign of char: char is unsigned -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - not found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so -- Looking for ZLIB - found -- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.11") -- Found PNG: /usr/lib/arm-linux-gnueabihf/libpng.so (found version "1.6.31") -- Looking for PNG - found -- Found TIFF: /usr/lib/arm-linux-gnueabihf/libtiff.so (found version "4.0.8") -- Looking for TIFF - found -- Looking for SSL - found: /usr/lib/arm-linux-gnueabihf/libssl.so -- DCMTK may have been built with libwrap -- DCMTK version 3.6.2 -- Etags targets added. -- Could NOT find Git (missing: GIT_EXECUTABLE) -- Could NOT find LIBLBFGS (missing: LIBLBFGS_LIBRARY LIBLBFGS_INCLUDE_DIR) -- Could NOT find NLOPT (missing: NLOPT_LIBRARY NLOPT_INCLUDE_DIR) -- Could NOT find OpenCL (missing: OPENCL_LIBRARIES OPENCL_INCLUDE_DIRS) -- Check for compiler OpenMP support... -- Looking for omp_get_thread_num -- Looking for omp_get_thread_num - found -- OpenMP flags "-fopenmp", OpenMP libraries "" -- CPU does not support SSE2. -- Performing Test SHARED_PTR_USE_MEMORY -- Performing Test SHARED_PTR_USE_MEMORY - Success -- Performing Test TR1_SHARED_PTR_USE_TR1_MEMORY -- Performing Test TR1_SHARED_PTR_USE_TR1_MEMORY - Success -- Performing Test TR1_SHARED_PTR_USE_MEMORY -- Performing Test TR1_SHARED_PTR_USE_MEMORY - Failed -- Could NOT find wxWidgets (missing: wxWidgets_LIBRARIES wxWidgets_INCLUDE_DIRS) CMake Warning (dev) at /usr/share/cmake-3.9/Modules/FindCUDA.cmake:497 (if): Policy CMP0054 is not set: Only interpret if() arguments as variables or keywords when unquoted. Run "cmake --help-policy CMP0054" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Quoted variables like "GNU" will no longer be dereferenced when the policy is set to NEW. Since the policy is not set the OLD behavior will be used. Call Stack (most recent call first): cmake/FindCUDA_wrap.cmake:26 (find_package) CMakeLists.txt:426 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- CUDA Build Level: ALL Compute Capabilities -- >> Generation 1: [ ] -- >> Generation 2: [ ] -- >> Generation 3: [ ] -- >> Generation 5: [ ] -- Could NOT find THRUST (missing: THRUST_INCLUDE_DIR) -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Looking for wxWidgets - not found. -- Looking for Matlab - not found. -- Looking for Octave - not found. -- The imported target "vtkgdcm" references the file "/usr/lib/arm-linux-gnueabihf/libvtkgdcm.so.2.8.2" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmsharpglue" references the file "/usr/lib/arm-linux-gnueabihf/libvtkgdcmsharpglue.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmJava" references the file "/usr/lib/arm-linux-gnueabihf/jni/libvtkgdcmJava.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmPython" references the file "/usr/lib/python/dist-packages/libvtkgdcmPython.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmPythonD" references the file "/usr/lib/arm-linux-gnueabihf/libvtkgdcmPythonD.so.2.8.2" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmdump" references the file "/usr/bin/gdcmdump" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmdiff" references the file "/usr/bin/gdcmdiff" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmraw" references the file "/usr/bin/gdcmraw" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmscanner" references the file "/usr/bin/gdcmscanner" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmanon" references the file "/usr/bin/gdcmanon" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmgendir" references the file "/usr/bin/gdcmgendir" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmimg" references the file "/usr/bin/gdcmimg" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmconv" references the file "/usr/bin/gdcmconv" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmtar" references the file "/usr/bin/gdcmtar" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcminfo" references the file "/usr/bin/gdcminfo" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmscu" references the file "/usr/bin/gdcmscu" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmxml" references the file "/usr/bin/gdcmxml" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmpap3" references the file "/usr/bin/gdcmpap3" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmpdf" references the file "/usr/bin/gdcmpdf" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- ITK_VERSION = 4.12.0 found -- Found unsuitable Qt version "" from NOTFOUND -- Looking for Qt4 - not found -- Could NOT find LIBYAML (missing: LIBYAML_LIBRARIES LIBYAML_INCLUDE_DIR) -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf make[1]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1' dh_auto_build -a make -j4 make[1]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' /usr/bin/cmake -H/<>/plastimatch-1.6.5+dfsg.1 -B/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/CMakeFiles /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/depend make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/depend make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/depend make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9 /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/libs/specfun /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun/CMakeFiles/specfun.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/inih-r29 /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/inih-r29/CMakeFiles/inih.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/libs/devillard /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/devillard /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/devillard/CMakeFiles/devillard.dir/DependInfo.cmake --color= Scanning dependencies of target specfun make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' Scanning dependencies of target devillard make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/build Scanning dependencies of target inih make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/build Scanning dependencies of target lbfgs make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 1%] Building C object libs/specfun/CMakeFiles/specfun.dir/mpbdv.c.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun && /usr/bin/cc -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/specfun.dir/mpbdv.c.o -c /<>/plastimatch-1.6.5+dfsg.1/libs/specfun/mpbdv.c [ 2%] Building C object libs/inih-r29/CMakeFiles/inih.dir/ini.c.o [ 2%] Building CXX object libs/devillard/CMakeFiles/devillard.dir/wirth.cpp.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/inih-r29 && /usr/bin/cc -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/inih.dir/ini.c.o -c /<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29/ini.c cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/devillard && /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/devillard.dir/wirth.cpp.o -c /<>/plastimatch-1.6.5+dfsg.1/libs/devillard/wirth.cpp [ 2%] Building C object libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/lib/lbfgs.c.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 && /usr/bin/cc -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/lbfgs.dir/lib/lbfgs.c.o -c /<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/lib/lbfgs.c [ 3%] Linking CXX static library ../../libdevillard.a cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/devillard && /usr/bin/cmake -P CMakeFiles/devillard.dir/cmake_clean_target.cmake cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/devillard && /usr/bin/cmake -E cmake_link_script CMakeFiles/devillard.dir/link.txt --verbose=1 /usr/bin/ar qc ../../libdevillard.a CMakeFiles/devillard.dir/wirth.cpp.o /usr/bin/ranlib ../../libdevillard.a make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 3%] Linking C static library ../../libspecfun.a cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun && /usr/bin/cmake -P CMakeFiles/specfun.dir/cmake_clean_target.cmake [ 3%] Building CXX object libs/inih-r29/CMakeFiles/inih.dir/INIReader.cpp.o [ 3%] Built target devillard cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/inih-r29 && /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/inih.dir/INIReader.cpp.o -c /<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29/INIReader.cpp make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/nkidecompress /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/nkidecompress/CMakeFiles/nkidecompress.dir/DependInfo.cmake --color= cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun && /usr/bin/cmake -E cmake_link_script CMakeFiles/specfun.dir/link.txt --verbose=1 Scanning dependencies of target nkidecompress make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' /usr/bin/ar qc ../../libspecfun.a CMakeFiles/specfun.dir/mpbdv.c.o /usr/bin/ranlib ../../libspecfun.a make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 3%] Building CXX object libs/nkidecompress/CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/nkidecompress && /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress/nkidecompress.cxx [ 3%] Built target specfun make -f src/plastimatch/sys/CMakeFiles/plmsys.dir/build.make src/plastimatch/sys/CMakeFiles/plmsys.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys/CMakeFiles/plmsys.dir/DependInfo.cmake --color= Scanning dependencies of target plmsys make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/sys/CMakeFiles/plmsys.dir/build.make src/plastimatch/sys/CMakeFiles/plmsys.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 4%] Building C object src/plastimatch/sys/CMakeFiles/plmsys.dir/delayload.c.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys && /usr/bin/cc -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsys.dir/delayload.c.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys/delayload.c [ 4%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/dir_list.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsys.dir/dir_list.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys/dir_list.cxx [ 4%] Linking CXX static library ../../libnkidecompress.a cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/nkidecompress && /usr/bin/cmake -P CMakeFiles/nkidecompress.dir/cmake_clean_target.cmake cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/nkidecompress && /usr/bin/cmake -E cmake_link_script CMakeFiles/nkidecompress.dir/link.txt --verbose=1 /usr/bin/ar qc ../../libnkidecompress.a CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o /usr/bin/ranlib ../../libnkidecompress.a make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 4%] Built target nkidecompress make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/clp /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/clp/CMakeFiles/plmclp.dir/DependInfo.cmake --color= Scanning dependencies of target plmclp make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 4%] Building CXX object src/plastimatch/clp/CMakeFiles/plmclp.dir/plm_clp.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/clp && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmclp.dir/plm_clp.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp/plm_clp.cxx [ 5%] Linking C static library ../../liblbfgs.a cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 && /usr/bin/cmake -P CMakeFiles/lbfgs.dir/cmake_clean_target.cmake cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 && /usr/bin/cmake -E cmake_link_script CMakeFiles/lbfgs.dir/link.txt --verbose=1 /usr/bin/ar qc ../../liblbfgs.a CMakeFiles/lbfgs.dir/lib/lbfgs.c.o /usr/bin/ranlib ../../liblbfgs.a make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 5%] Built target lbfgs make -f src/plastimatch/standalone/CMakeFiles/raw_to_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/raw_to_mha.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/raw_to_mha.dir/DependInfo.cmake --color= Scanning dependencies of target raw_to_mha make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/raw_to_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/raw_to_mha.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 5%] Building C object src/plastimatch/standalone/CMakeFiles/raw_to_mha.dir/raw_to_mha.c.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cc -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/raw_to_mha.dir/raw_to_mha.c.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/raw_to_mha.c [ 5%] Linking CXX executable ../../../raw_to_mha cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/raw_to_mha.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/raw_to_mha.dir/raw_to_mha.c.o -o ../../../raw_to_mha -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include [ 5%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/dlib_threads.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsys.dir/dlib_threads.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys/dlib_threads.cxx make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 5%] Built target raw_to_mha make -f src/plastimatch/standalone/CMakeFiles/mha_to_raw.dir/build.make src/plastimatch/standalone/CMakeFiles/mha_to_raw.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/mha_to_raw.dir/DependInfo.cmake --color= Scanning dependencies of target mha_to_raw make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/mha_to_raw.dir/build.make src/plastimatch/standalone/CMakeFiles/mha_to_raw.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 6%] Building C object src/plastimatch/standalone/CMakeFiles/mha_to_raw.dir/mha_to_raw.c.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cc -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/mha_to_raw.dir/mha_to_raw.c.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/mha_to_raw.c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/mha_to_raw.c: In function ‘main’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/mha_to_raw.c:75:5: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] fread(&c,1,1,fp1); ^~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/mha_to_raw.c:78:9: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result] fread(&c,1,1,fp1); ^~~~~~~~~~~~~~~~~ [ 6%] Linking CXX executable ../../../mha_to_raw cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/mha_to_raw.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic CMakeFiles/mha_to_raw.dir/mha_to_raw.c.o -o ../../../mha_to_raw -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 6%] Built target mha_to_raw [ 7%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/file_util.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsys.dir/file_util.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys/file_util.cxx [ 7%] Linking CXX static library ../../libinih.a cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/inih-r29 && /usr/bin/cmake -P CMakeFiles/inih.dir/cmake_clean_target.cmake cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/inih-r29 && /usr/bin/cmake -E cmake_link_script CMakeFiles/inih.dir/link.txt --verbose=1 /usr/bin/ar qc ../../libinih.a CMakeFiles/inih.dir/ini.c.o CMakeFiles/inih.dir/INIReader.cpp.o /usr/bin/ranlib ../../libinih.a make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 7%] Built target inih [ 7%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/logfile.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsys.dir/logfile.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys/logfile.cxx [ 7%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/option_range.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsys.dir/option_range.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys/option_range.cxx [ 7%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/path_util.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsys.dir/path_util.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys/path_util.cxx [ 8%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_endian.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsys.dir/plm_endian.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys/plm_endian.cxx [ 8%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_fwrite.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsys.dir/plm_fwrite.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys/plm_fwrite.cxx [ 8%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_sleep.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsys.dir/plm_sleep.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys/plm_sleep.cxx [ 8%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_timer.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsys.dir/plm_timer.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys/plm_timer.cxx [ 9%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/print_and_exit.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsys.dir/print_and_exit.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys/print_and_exit.cxx [ 9%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/string_util.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsys.dir/string_util.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys/string_util.cxx [ 9%] Linking CXX shared library ../../../libplmsys.so cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmsys.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmsys.so.1.6 -o ../../../libplmsys.so.1.6 CMakeFiles/plmsys.dir/delayload.c.o CMakeFiles/plmsys.dir/dir_list.cxx.o CMakeFiles/plmsys.dir/dlib_threads.cxx.o CMakeFiles/plmsys.dir/file_util.cxx.o CMakeFiles/plmsys.dir/logfile.cxx.o CMakeFiles/plmsys.dir/option_range.cxx.o CMakeFiles/plmsys.dir/path_util.cxx.o CMakeFiles/plmsys.dir/plm_endian.cxx.o CMakeFiles/plmsys.dir/plm_fwrite.cxx.o CMakeFiles/plmsys.dir/plm_sleep.cxx.o CMakeFiles/plmsys.dir/plm_timer.cxx.o CMakeFiles/plmsys.dir/print_and_exit.cxx.o CMakeFiles/plmsys.dir/string_util.cxx.o -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -ldl -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -ldl cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys && /usr/bin/cmake -E cmake_symlink_library ../../../libplmsys.so.1.6 ../../../libplmsys.so.1.6 ../../../libplmsys.so make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 9%] Built target plmsys make -f src/plastimatch/base/CMakeFiles/plmbase.dir/build.make src/plastimatch/base/CMakeFiles/plmbase.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base/CMakeFiles/plmbase.dir/DependInfo.cmake --color= [ 9%] Linking CXX static library libplmclp.a cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/clp && /usr/bin/cmake -P CMakeFiles/plmclp.dir/cmake_clean_target.cmake cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/clp && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmclp.dir/link.txt --verbose=1 /usr/bin/ar qc libplmclp.a CMakeFiles/plmclp.dir/plm_clp.cxx.o /usr/bin/ranlib libplmclp.a make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 9%] Built target plmclp Scanning dependencies of target plmbase make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/base/CMakeFiles/plmbase.dir/build.make src/plastimatch/base/CMakeFiles/plmbase.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/aperture.cxx.o [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/astroid_dose.cxx.o [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/astroid_dose.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/astroid_dose.cxx cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/aperture.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/aperture.cxx cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/bspline_interpolate.cxx [ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_warp.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/plmbase.dir/bspline_warp.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/bspline_warp.cxx [ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_xform.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/bspline_xform.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/bspline_xform.cxx [ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/bspline_xform_legacy.cxx [ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/cxt_extract.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/cxt_extract.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/cxt_extract.cxx [ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/cxt_io.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/cxt_io.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/cxt_io.cxx [ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dicom_probe.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/dicom_probe.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/dicom_probe.cxx [ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dicom_util.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/dicom_util.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/dicom_util.cxx [ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/direction_cosines.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/direction_cosines.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/direction_cosines.cxx [ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/direction_matrices.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/direction_matrices.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/direction_matrices.cxx [ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/exchkeys.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/exchkeys.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/exchkeys.cxx [ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/float_pair_list.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/float_pair_list.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/float_pair_list.cxx [ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/gaussian.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/gaussian.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/gaussian.cxx [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/hnd_io.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/hnd_io.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/hnd_io.cxx [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/interpolate.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/interpolate.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/interpolate.cxx [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_dicom_load.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_dicom_load.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx [ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_dicom_save.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_dicom_save.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_save.cxx [ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_directions.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_directions.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_directions.cxx /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx: In instantiation of ‘void load_dicom_dir_rdr(T, const char*) [with T = itk::SmartPointer > >]’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:189:51: required from here /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:104:61: warning: ‘gdcm::SerieHelper* itk::GDCMSeriesFileNames::GetSeriesHelper()’ is deprecated [-Wdeprecated-declarations] gdcm::SerieHelper* gsh = nameGenerator->GetSeriesHelper (); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkGDCMImageIO.h:33, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:8: /usr/include/ITK-4.12/itkGDCMSeriesFileNames.h:151:3: note: declared here itkLegacyMacro(gdcm::SerieHelper * GetSeriesHelper(void)); ^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:104:61: warning: ‘gdcm::SerieHelper* itk::GDCMSeriesFileNames::GetSeriesHelper()’ is deprecated [-Wdeprecated-declarations] gdcm::SerieHelper* gsh = nameGenerator->GetSeriesHelper (); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkGDCMImageIO.h:33, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:8: /usr/include/ITK-4.12/itkGDCMSeriesFileNames.h:151:3: note: declared here itkLegacyMacro(gdcm::SerieHelper * GetSeriesHelper(void)); ^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx: In instantiation of ‘void load_dicom_dir_rdr(T, const char*) [with T = itk::SmartPointer > >]’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:199:51: required from here /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:104:61: warning: ‘gdcm::SerieHelper* itk::GDCMSeriesFileNames::GetSeriesHelper()’ is deprecated [-Wdeprecated-declarations] gdcm::SerieHelper* gsh = nameGenerator->GetSeriesHelper (); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkGDCMImageIO.h:33, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:8: /usr/include/ITK-4.12/itkGDCMSeriesFileNames.h:151:3: note: declared here itkLegacyMacro(gdcm::SerieHelper * GetSeriesHelper(void)); ^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:104:61: warning: ‘gdcm::SerieHelper* itk::GDCMSeriesFileNames::GetSeriesHelper()’ is deprecated [-Wdeprecated-declarations] gdcm::SerieHelper* gsh = nameGenerator->GetSeriesHelper (); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkGDCMImageIO.h:33, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:8: /usr/include/ITK-4.12/itkGDCMSeriesFileNames.h:151:3: note: declared here itkLegacyMacro(gdcm::SerieHelper * GetSeriesHelper(void)); ^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx: In instantiation of ‘void load_dicom_dir_rdr(T, const char*) [with T = itk::SmartPointer > >]’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:209:51: required from here /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:104:61: warning: ‘gdcm::SerieHelper* itk::GDCMSeriesFileNames::GetSeriesHelper()’ is deprecated [-Wdeprecated-declarations] gdcm::SerieHelper* gsh = nameGenerator->GetSeriesHelper (); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkGDCMImageIO.h:33, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:8: /usr/include/ITK-4.12/itkGDCMSeriesFileNames.h:151:3: note: declared here itkLegacyMacro(gdcm::SerieHelper * GetSeriesHelper(void)); ^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:104:61: warning: ‘gdcm::SerieHelper* itk::GDCMSeriesFileNames::GetSeriesHelper()’ is deprecated [-Wdeprecated-declarations] gdcm::SerieHelper* gsh = nameGenerator->GetSeriesHelper (); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkGDCMImageIO.h:33, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:8: /usr/include/ITK-4.12/itkGDCMSeriesFileNames.h:151:3: note: declared here itkLegacyMacro(gdcm::SerieHelper * GetSeriesHelper(void)); ^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx: In instantiation of ‘void load_dicom_dir_rdr(T, const char*) [with T = itk::SmartPointer > >]’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:219:51: required from here /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:104:61: warning: ‘gdcm::SerieHelper* itk::GDCMSeriesFileNames::GetSeriesHelper()’ is deprecated [-Wdeprecated-declarations] gdcm::SerieHelper* gsh = nameGenerator->GetSeriesHelper (); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkGDCMImageIO.h:33, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:8: /usr/include/ITK-4.12/itkGDCMSeriesFileNames.h:151:3: note: declared here itkLegacyMacro(gdcm::SerieHelper * GetSeriesHelper(void)); ^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:104:61: warning: ‘gdcm::SerieHelper* itk::GDCMSeriesFileNames::GetSeriesHelper()’ is deprecated [-Wdeprecated-declarations] gdcm::SerieHelper* gsh = nameGenerator->GetSeriesHelper (); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkGDCMImageIO.h:33, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:8: /usr/include/ITK-4.12/itkGDCMSeriesFileNames.h:151:3: note: declared here itkLegacyMacro(gdcm::SerieHelper * GetSeriesHelper(void)); ^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx: In instantiation of ‘void load_dicom_dir_rdr(T, const char*) [with T = itk::SmartPointer > >]’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:229:51: required from here /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:104:61: warning: ‘gdcm::SerieHelper* itk::GDCMSeriesFileNames::GetSeriesHelper()’ is deprecated [-Wdeprecated-declarations] gdcm::SerieHelper* gsh = nameGenerator->GetSeriesHelper (); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkGDCMImageIO.h:33, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:8: /usr/include/ITK-4.12/itkGDCMSeriesFileNames.h:151:3: note: declared here itkLegacyMacro(gdcm::SerieHelper * GetSeriesHelper(void)); ^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:104:61: warning: ‘gdcm::SerieHelper* itk::GDCMSeriesFileNames::GetSeriesHelper()’ is deprecated [-Wdeprecated-declarations] gdcm::SerieHelper* gsh = nameGenerator->GetSeriesHelper (); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkGDCMImageIO.h:33, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:8: /usr/include/ITK-4.12/itkGDCMSeriesFileNames.h:151:3: note: declared here itkLegacyMacro(gdcm::SerieHelper * GetSeriesHelper(void)); ^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx: In instantiation of ‘void load_dicom_dir_rdr(T, const char*) [with T = itk::SmartPointer > >]’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:239:51: required from here /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:104:61: warning: ‘gdcm::SerieHelper* itk::GDCMSeriesFileNames::GetSeriesHelper()’ is deprecated [-Wdeprecated-declarations] gdcm::SerieHelper* gsh = nameGenerator->GetSeriesHelper (); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkGDCMImageIO.h:33, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:8: /usr/include/ITK-4.12/itkGDCMSeriesFileNames.h:151:3: note: declared here itkLegacyMacro(gdcm::SerieHelper * GetSeriesHelper(void)); ^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:104:61: warning: ‘gdcm::SerieHelper* itk::GDCMSeriesFileNames::GetSeriesHelper()’ is deprecated [-Wdeprecated-declarations] gdcm::SerieHelper* gsh = nameGenerator->GetSeriesHelper (); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkGDCMImageIO.h:33, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:8: /usr/include/ITK-4.12/itkGDCMSeriesFileNames.h:151:3: note: declared here itkLegacyMacro(gdcm::SerieHelper * GetSeriesHelper(void)); ^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx: In instantiation of ‘void load_dicom_dir_rdr(T, const char*) [with T = itk::SmartPointer > >]’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:249:51: required from here /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:104:61: warning: ‘gdcm::SerieHelper* itk::GDCMSeriesFileNames::GetSeriesHelper()’ is deprecated [-Wdeprecated-declarations] gdcm::SerieHelper* gsh = nameGenerator->GetSeriesHelper (); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkGDCMImageIO.h:33, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:8: /usr/include/ITK-4.12/itkGDCMSeriesFileNames.h:151:3: note: declared here itkLegacyMacro(gdcm::SerieHelper * GetSeriesHelper(void)); ^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:104:61: warning: ‘gdcm::SerieHelper* itk::GDCMSeriesFileNames::GetSeriesHelper()’ is deprecated [-Wdeprecated-declarations] gdcm::SerieHelper* gsh = nameGenerator->GetSeriesHelper (); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkGDCMImageIO.h:33, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:8: /usr/include/ITK-4.12/itkGDCMSeriesFileNames.h:151:3: note: declared here itkLegacyMacro(gdcm::SerieHelper * GetSeriesHelper(void)); ^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx: In instantiation of ‘void load_dicom_dir_rdr(T, const char*) [with T = itk::SmartPointer > >]’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:259:51: required from here /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:104:61: warning: ‘gdcm::SerieHelper* itk::GDCMSeriesFileNames::GetSeriesHelper()’ is deprecated [-Wdeprecated-declarations] gdcm::SerieHelper* gsh = nameGenerator->GetSeriesHelper (); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkGDCMImageIO.h:33, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:8: /usr/include/ITK-4.12/itkGDCMSeriesFileNames.h:151:3: note: declared here itkLegacyMacro(gdcm::SerieHelper * GetSeriesHelper(void)); ^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:104:61: warning: ‘gdcm::SerieHelper* itk::GDCMSeriesFileNames::GetSeriesHelper()’ is deprecated [-Wdeprecated-declarations] gdcm::SerieHelper* gsh = nameGenerator->GetSeriesHelper (); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkGDCMImageIO.h:33, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_dicom_load.cxx:8: /usr/include/ITK-4.12/itkGDCMSeriesFileNames.h:151:3: note: declared here itkLegacyMacro(gdcm::SerieHelper * GetSeriesHelper(void)); ^ [ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image.cxx In file included from /usr/include/c++/7/vector:69:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkImageFileReader.h:24, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/cxt_extract.cxx:8: /usr/include/c++/7/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const itk::ContinuousIndex&}; _Tp = itk::ContinuousIndex; _Alloc = std::allocator >]’: /usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator {aka __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >}’ changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/7/vector:64:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkLightProcessObject.h:21, from /usr/include/ITK-4.12/itkImageIOBase.h:24, from /usr/include/ITK-4.12/itkImageFileReader.h:24, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/cxt_extract.cxx:8: /usr/include/c++/7/bits/stl_vector.h: In member function ‘void itk::ContourExtractor2DImageFilter::FillOutputs() [with TInputImage = itk::Image]’: /usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/7/deque:64:0, from /usr/include/ITK-4.12/vcl_deque.h:4, from /usr/include/ITK-4.12/itkContourExtractor2DImageFilter.h:26, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/cxt_extract.cxx:10: /usr/include/c++/7/bits/stl_deque.h: In member function ‘std::deque<_Tp, _Alloc>::iterator std::deque<_Tp, _Alloc>::insert(std::deque<_Tp, _Alloc>::const_iterator, _InputIterator, _InputIterator) [with _InputIterator = std::_Deque_iterator, itk::ContinuousIndex&, itk::ContinuousIndex*>; = void; _Tp = itk::ContinuousIndex; _Alloc = std::allocator >]’: /usr/include/c++/7/bits/stl_deque.h:1735:2: note: parameter passing for argument of type ‘std::deque >::const_iterator {aka std::_Deque_iterator, const itk::ContinuousIndex&, const itk::ContinuousIndex*>}’ changed in GCC 7.1 insert(const_iterator __position, _InputIterator __first, ^~~~~~ In file included from /usr/include/ITK-4.12/itkContourExtractor2DImageFilter.h:296:0, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/cxt_extract.cxx:10: /usr/include/ITK-4.12/itkContourExtractor2DImageFilter.hxx: In member function ‘void itk::ContourExtractor2DImageFilter::AddSegment(itk::ContourExtractor2DImageFilter::VertexType, itk::ContourExtractor2DImageFilter::VertexType) [with TInputImage = itk::Image]’: /usr/include/ITK-4.12/itkContourExtractor2DImageFilter.hxx:318:9: note: parameter passing for argument of type ‘std::deque >::const_iterator {aka std::_Deque_iterator, const itk::ContinuousIndex&, const itk::ContinuousIndex*>}’ changed in GCC 7.1 head->insert( head->end(), tail->begin(), tail->end() ); ^~~~ /usr/include/ITK-4.12/itkContourExtractor2DImageFilter.hxx:341:9: note: parameter passing for argument of type ‘std::deque >::const_iterator {aka std::_Deque_iterator, const itk::ContinuousIndex&, const itk::ContinuousIndex*>}’ changed in GCC 7.1 tail->insert( tail->begin(), head->begin(), head->end() ); ^~~~ [ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_accumulate.cxx [ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_cast.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_cast.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_cast.cxx [ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_clone.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_clone.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_clone.cxx [ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_create.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_create.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_create.cxx [ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_load_char.cxx [ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_load_double.cxx [ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_load_float.cxx [ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_load_int32.cxx [ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_load_short.cxx [ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_load_uchar.cxx [ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_load_uint32.cxx [ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_load_ushort.cxx [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_load_vec.cxx [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_origin.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_origin.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_origin.cxx [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_region.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_region.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_region.cxx [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_save.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_save.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_save.cxx [ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_scale.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_scale.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_scale.cxx [ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_stats.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_image_stats.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_stats.cxx [ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_metadata.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_metadata.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_metadata.cxx [ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_pointset.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_pointset.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_pointset.cxx [ 20%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_resample.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_resample.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_resample.cxx [ 20%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_volume_header.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_volume_header.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_volume_header.cxx [ 20%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_warp.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/itk_warp.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_warp.cxx [ 20%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/mc_dose.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/mc_dose.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/mc_dose.cxx [ 21%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/metadata.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/metadata.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/metadata.cxx [ 21%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/mha_io.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/mha_io.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/mha_io.cxx [ 21%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/nki_io.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/nki_io.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/nki_io.cxx [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/parameter_parser.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/parameter_parser.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/parameter_parser.cxx In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkFunctionBase.h:21, from /usr/include/ITK-4.12/itkImageFunction.h:21, from /usr/include/ITK-4.12/itkInterpolateImageFunction.h:21, from /usr/include/ITK-4.12/itkLinearInterpolateImageFunction.h:21, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_resample.cxx:5: /usr/include/ITK-4.12/itkVectorResampleImageFilter.h: In member function ‘void itk::VectorResampleImageFilter::SetDefaultPixelValue(itk::VectorResampleImageFilter::PixelType) [with TInputImage = itk::Image, 3>; TOutputImage = itk::Image, 3>; TInterpolatorPrecisionType = double]’: /usr/include/ITK-4.12/itkVectorResampleImageFilter.h:147:3: note: parameter passing for argument of type ‘const PixelType {aka const itk::Vector}’ changed in GCC 7.1 itkSetMacro(DefaultPixelValue, PixelType); ^ [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_file_format.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/plm_file_format.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/plm_file_format.cxx [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/plm_image.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/plm_image.cxx /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/plm_file_format.cxx: In function ‘Plm_file_format plm_file_format_deduce(const char*)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/plm_file_format.cxx:81:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (line, MAX_LINE, fp); ~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_convert.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/plm_image_convert.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/plm_image_convert.cxx [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_header.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/plm_image_header.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/plm_image_header.cxx [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_set.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/plm_image_set.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/plm_image_set.cxx [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_type.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/plm_image_type.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/plm_image_type.cxx [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_warp.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/plm_warp.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/plm_warp.cxx [ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/pointset.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/pointset.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/pointset.cxx /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/pointset.cxx: In member function ‘void Pointset::load_txt(const char*) [with T = Labeled_point]’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/pointset.cxx:100:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (s, 1024, fp); ~~~~~~^~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/pointset.cxx: In member function ‘void Pointset::load_fcsv(const char*) [with T = Labeled_point]’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/pointset.cxx:57:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (s, 1024, fp); ~~~~~~^~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/pointset.cxx: In member function ‘void Pointset::load_txt(const char*) [with T = Point]’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/pointset.cxx:100:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (s, 1024, fp); ~~~~~~^~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/pointset.cxx: In member function ‘void Pointset::load_fcsv(const char*) [with T = Point]’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/pointset.cxx:57:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (s, 1024, fp); ~~~~~~^~~~~~~~~~~~~ [ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/pointset_warp.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/pointset_warp.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/pointset_warp.cxx [ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_image.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/proj_image.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/proj_image.cxx [ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_image_dir.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/proj_image_dir.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/proj_image_dir.cxx /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/proj_image.cxx: In function ‘void pfm_load(Proj_image*, const char*)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/proj_image.cxx:175:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (buf, 1024, fp); ~~~~~~^~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/proj_image.cxx:183:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (buf, 1024, fp); ~~~~~~^~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/proj_image.cxx:190:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (buf, 1024, fp); ~~~~~~^~~~~~~~~~~~~~~ [ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_matrix.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/proj_matrix.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/proj_matrix.cxx [ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_volume.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/proj_volume.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/proj_volume.cxx [ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/pwlut.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/pwlut.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/pwlut.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rasterize_slice.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/rasterize_slice.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/rasterize_slice.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rasterizer.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/rasterizer.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/rasterizer.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/raw_pointset.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/raw_pointset.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/raw_pointset.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_exact.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/ray_trace_exact.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/ray_trace_exact.cxx /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/raw_pointset.cxx: In function ‘Raw_pointset* pointset_load_fcsv(const char*)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/raw_pointset.cxx:81:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (s, 1024, fp); ~~~~~~^~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/raw_pointset.cxx: In function ‘Raw_pointset* pointset_load_txt(const char*)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/raw_pointset.cxx:135:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (s, 1024, fp); ~~~~~~^~~~~~~~~~~~~ [ 27%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/ray_trace_probe.cxx [ 27%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/ray_trace_uniform.cxx [ 27%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rpl_volume.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/rpl_volume.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/rpl_volume.cxx [ 27%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/rtds_dcmtk.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtds_gdcm.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/rtds_gdcm.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/rtds_gdcm.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rt_study.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/rt_study.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/rt_study.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/rt_study_metadata.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtog_io.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/rtog_io.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/rtog_io.cxx [ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtss.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/rtss.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/rtss.cxx [ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtss_contour.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/rtss_contour.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/rtss_contour.cxx [ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtss_roi.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/rtss_roi.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/rtss_roi.cxx [ 30%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/rtplan.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/rtplan.cxx [ 30%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan_beam.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/rtplan_beam.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/rtplan_beam.cxx [ 30%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/rtplan_control_pt.cxx [ 30%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/segmentation.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/segmentation.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/segmentation.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/slice_extract.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/slice_extract.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/slice_extract.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/slice_list.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/slice_list.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/slice_list.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ss_img_extract.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/ss_img_extract.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/ss_img_extract.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ss_list_io.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/ss_list_io.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/ss_list_io.cxx [ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/thumbnail.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/thumbnail.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/thumbnail.cxx [ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/vf.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/vf.cxx [ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf_convolve.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/vf_convolve.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/vf_convolve.cxx [ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf_jacobian.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/vf_jacobian.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/vf_jacobian.cxx [ 33%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf_stats.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/vf_stats.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/vf_stats.cxx [ 33%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/volume.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/volume.cxx [ 33%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_conv.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/plmbase.dir/volume_conv.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/volume_conv.cxx [ 34%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_fill.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/volume_fill.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/volume_fill.cxx [ 34%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_gaussian.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/volume_gaussian.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/volume_gaussian.cxx [ 34%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_grad.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/volume_grad.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/volume_grad.cxx [ 34%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_header.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/volume_header.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/volume_header.cxx [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_limit.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/volume_limit.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/volume_limit.cxx [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_resample.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/volume_resample.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/volume_resample.cxx [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_stats.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/volume_stats.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/volume_stats.cxx [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/xform.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform.cxx [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform_convert.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/xform_convert.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_convert.cxx [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform_legacy.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/xform_legacy.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_legacy.cxx /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_legacy.cxx: In function ‘void xform_legacy_save_itk_bsp(itk::BSplineDeformableTransform::Pointer, const char*)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_legacy.cxx:230:93: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘itk::Transform::NumberOfParametersType {aka long unsigned int}’ [-Wformat=] printf (" # of parameters=%d\n", transform->GetBulkTransform()->GetNumberOfParameters()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_legacy.cxx: In function ‘void xform_legacy_load(Xform*, FILE*)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_legacy.cxx:37:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (buf,1024,fp); ~~~~~~^~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_legacy.cxx:99:7: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(buf,1024,fp); ~~~~~^~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_legacy.cxx:100:7: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(buf,1024,fp); ~~~~~^~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_legacy.cxx:103:7: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(buf,1024,fp); ~~~~~^~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_legacy.cxx:141:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(buf,1024,fp); ~~~~~^~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_legacy.cxx:150:7: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(buf,1024,fp); ~~~~~^~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_legacy.cxx:156:7: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(buf,1024,fp); ~~~~~^~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_legacy.cxx:168:7: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(buf,1024,fp); ~~~~~^~~~~~~~~~~~~ [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform_point.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/xform_point.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_point.cxx [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_ct.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/xio_ct.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_ct.cxx /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_point.cxx: In function ‘void xform_point_transform_gpuit_bspline(FloatPoint3DType*, Xform*, FloatPoint3DType)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_point.cxx:19:1: note: parameter passing for argument of type ‘FloatPoint3DType {aka itk::Point}’ changed in GCC 7.1 xform_point_transform_gpuit_bspline ( ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_point.cxx: In function ‘void xform_point_transform_itk_vf(FloatPoint3DType*, Xform*, FloatPoint3DType)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_point.cxx:40:1: note: parameter passing for argument of type ‘FloatPoint3DType {aka itk::Point}’ changed in GCC 7.1 xform_point_transform_itk_vf ( ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_point.cxx: In function ‘void xform_point_transform(FloatPoint3DType*, Xform*, FloatPoint3DType)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xform_point.cxx:70:1: note: parameter passing for argument of type ‘FloatPoint3DType {aka itk::Point}’ changed in GCC 7.1 xform_point_transform ( ^~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_ct_transform.cxx [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_demographic.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/xio_demographic.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_demographic.cxx [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_dir.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/xio_dir.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_dir.cxx [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_dose.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/xio_dose.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_dose.cxx [ 38%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_patient.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/xio_patient.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_patient.cxx [ 38%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_plan.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/xio_plan.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_plan.cxx [ 38%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_structures.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/xio_structures.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_structures.cxx /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_dose.cxx: In function ‘void xio_dose_load_header(Xio_dose_header*, const char*)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_dose.cxx:73:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (line1, sizeof(line1), fp); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_dose.cxx:82:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (line1, sizeof(line1), fp); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_dose.cxx:86:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (line1, sizeof(line1), fp); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_dose.cxx:90:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (line1, sizeof(line1), fp); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_dose.cxx:101:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (line1, sizeof(line1), fp); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_dose.cxx:106:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (line1, sizeof(line1), fp); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_dose.cxx:117:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (line1, sizeof(line1), fp); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_dose.cxx:120:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (line1, sizeof(line1), fp); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_dose.cxx:135:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (line1, sizeof(line1), fp); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_studyset.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/xio_studyset.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_studyset.cxx [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xpm.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/xpm.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xpm.cxx [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_file.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/dcmtk_file.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/dcmtk_file.cxx /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_structures.cxx: In function ‘void add_cms_structure(Rtss*, const Xio_studyset&, const char*, float)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_structures.cxx:120:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (buf, 1024, fp); ~~~~~~^~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_structures.cxx:121:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (buf, 1024, fp); ~~~~~~^~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_structures.cxx:122:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (buf, 1024, fp); ~~~~~~^~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_structures.cxx:123:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (buf, 1024, fp); ~~~~~~^~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_structures.cxx:124:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (buf, 1024, fp); ~~~~~~^~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_structures.cxx:134:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (buf, 1024, fp); ~~~~~~^~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_structures.cxx:141:8: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (buf, 1024, fp); ~~~~~~^~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/xio_structures.cxx:180:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (buf, 1024, fp); ~~~~~~^~~~~~~~~~~~~~~ [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_image.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/dcmtk_image.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/dcmtk_image.cxx [ 40%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/dcmtk_metadata.cxx [ 40%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_module.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/dcmtk_module.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/dcmtk_module.cxx [ 40%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/dcmtk_rdd.cxx [ 40%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/dcmtk_rtdose.cxx [ 41%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/dcmtk_rtss.cxx [ 41%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx [ 41%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/dcmtk_rt_study.cxx [ 41%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/dcmtk_rt_study_p.cxx [ 42%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_series.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 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-I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/dcmtk_sro.cxx [ 42%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment 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/usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldlib -lnsl -ljpeg -lpng -lblas -llapack -lsqlite3 -lpthread -ldl cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base && /usr/bin/cmake -E cmake_symlink_library ../../../libplmbase.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmbase.so make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 43%] Built target plmbase make -f src/plastimatch/util/CMakeFiles/plmutil.dir/build.make src/plastimatch/util/CMakeFiles/plmutil.dir/depend make -f src/plastimatch/dose/CMakeFiles/plmdose.dir/build.make src/plastimatch/dose/CMakeFiles/plmdose.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose/CMakeFiles/plmdose.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util/CMakeFiles/plmutil.dir/DependInfo.cmake --color= Scanning dependencies of target plmdose make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/dose/CMakeFiles/plmdose.dir/build.make src/plastimatch/dose/CMakeFiles/plmdose.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 44%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/bragg_curve.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmdose.dir/bragg_curve.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/bragg_curve.cxx [ 44%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/particle_type.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmdose.dir/particle_type.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/particle_type.cxx [ 44%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/dose_volume_functions.cxx [ 44%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_beam.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmdose.dir/rt_beam.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_beam.cxx Scanning dependencies of target plmutil make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/util/CMakeFiles/plmutil.dir/build.make src/plastimatch/util/CMakeFiles/plmutil.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/bspline_correspond.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/bspline_correspond.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/bspline_correspond.cxx [ 45%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx: In member function ‘bool Rt_depth_dose::load(const char*)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:64:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (linebuf, 128, fp); ~~~~~~^~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx: In member function ‘bool Rt_depth_dose::load_xio(const char*)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:86:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (linebuf, 128, fp); ~~~~~~^~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:90:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (linebuf, 128, fp); ~~~~~~^~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:103:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (linebuf, 128, fp); ~~~~~~^~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:114:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (linebuf, 128, fp); ~~~~~~^~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:125:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (linebuf, 128, fp); ~~~~~~^~~~~~~~~~~~~~~~~~ [ 45%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_dose.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmdose.dir/rt_dose.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_dose.cxx [ 46%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dice_statistics.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/plmutil.dir/dice_statistics.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/dice_statistics.cxx [ 46%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_lut.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmdose.dir/rt_lut.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_lut.cxx /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_beam.cxx: In member function ‘bool Rt_beam::load(const char*)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_beam.cxx:187:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets (linebuf, 128, fp); ~~~~~~^~~~~~~~~~~~~~~~~~ [ 46%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/dicom_sro_save.cxx [ 46%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_mebs.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmdose.dir/rt_mebs.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_mebs.cxx [ 47%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_parms.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmdose.dir/rt_parms.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_parms.cxx [ 47%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_plan.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmdose.dir/rt_plan.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_plan.cxx [ 47%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/distance_map.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/distance_map.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/distance_map.cxx [ 47%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_sigma.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmdose.dir/rt_sigma.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/rt_sigma.cxx [ 48%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/wed_parms.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmdose.dir/wed_parms.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose/wed_parms.cxx [ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/diff.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/diff.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/diff.cxx [ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dvh.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/dvh.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/dvh.cxx [ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/gamma_dose_comparison.cxx [ 49%] Linking CXX shared library ../../../libplmdose.so cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmdose.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmdose.so.1.6 -o ../../../libplmdose.so.1.6 CMakeFiles/plmdose.dir/bragg_curve.cxx.o CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o CMakeFiles/plmdose.dir/particle_type.cxx.o CMakeFiles/plmdose.dir/rt_beam.cxx.o CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o CMakeFiles/plmdose.dir/rt_dose.cxx.o CMakeFiles/plmdose.dir/rt_lut.cxx.o CMakeFiles/plmdose.dir/rt_mebs.cxx.o CMakeFiles/plmdose.dir/rt_parms.cxx.o CMakeFiles/plmdose.dir/rt_plan.cxx.o CMakeFiles/plmdose.dir/rt_sigma.cxx.o CMakeFiles/plmdose.dir/wed_parms.cxx.o -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 ../../../libspecfun.a -ldlib -lnsl -lblas -llapack -lsqlite3 -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm ../../../libnkidecompress.a cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose && /usr/bin/cmake -E cmake_symlink_library ../../../libplmdose.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmdose.so make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 49%] Built target plmdose [ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/geometry_chooser.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/geometry_chooser.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/geometry_chooser.cxx [ 50%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/hausdorff_distance.cxx [ 50%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/image_boundary.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/image_boundary.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/image_boundary.cxx [ 50%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/image_center.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/plmutil.dir/image_center.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/image_center.cxx [ 50%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_adjust.cxx.o [ 51%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_distance_map.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/itk_adjust.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/itk_adjust.cxx cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/itk_distance_map.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/itk_distance_map.cxx [ 51%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_crop.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/itk_crop.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/itk_crop.cxx [ 51%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_gabor.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/itk_gabor.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/itk_gabor.cxx [ 51%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_mask.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/itk_mask.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/itk_mask.cxx [ 52%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_scale.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/itk_scale.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/itk_scale.cxx [ 52%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_threshold.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/itk_threshold.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/itk_threshold.cxx [ 52%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_union.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/itk_union.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/itk_union.cxx [ 53%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/landmark_diff.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/landmark_diff.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/landmark_diff.cxx [ 53%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/proj_image_filter.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/proj_image_filter.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/proj_image_filter.cxx [ 53%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/plm_series.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/plm_series.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/plm_series.cxx [ 53%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/plm_study.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/plm_study.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/plm_study.cxx [ 54%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/rt_study_warp.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/rt_study_warp.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/rt_study_warp.cxx [ 54%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/sift.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/sift.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/sift.cxx [ 54%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/simplify_points.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/simplify_points.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/simplify_points.cxx [ 54%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/ss_img_stats.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/ss_img_stats.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/ss_img_stats.cxx [ 55%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/synthetic_mha.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/synthetic_mha.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/synthetic_mha.cxx [ 55%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/synthetic_vf.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/synthetic_vf.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/synthetic_vf.cxx [ 55%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/threshbox.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/threshbox.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/threshbox.cxx /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/threshbox.cxx: In function ‘void do_overlap_fraction(Threshbox_parms*)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/threshbox.cxx:257:8: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result] fscanf(fp1, "%s", tmpbuf); ~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/threshbox.cxx:258:8: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result] fscanf(fp1, "%f %f %f", &phys_max1[0], &phys_max1[1], &phys_max1[2]); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/threshbox.cxx:266:8: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result] fscanf(fp2, "%s", tmpbuf); ~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/threshbox.cxx:267:8: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result] fscanf(fp2, "%f %f %f", &phys_max2[0], &phys_max2[1], &phys_max2[2]); ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 55%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/vf_invert.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/plmutil.dir/vf_invert.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/vf_invert.cxx [ 56%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/gabor.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/gabor.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/gabor.cxx [ 56%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/ramp_filter.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmutil.dir/ramp_filter.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/ramp_filter.cxx In file included from /usr/include/c++/7/vector:69:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkDataObject.h:31, from /usr/include/ITK-4.12/itkProcessObject.h:31, from /usr/include/ITK-4.12/itkImageRegistrationMethod.h:21, from /<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT/itkScaleInvariantFeatureImageFilter.h:47, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/sift.cxx:7: /usr/include/c++/7/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/7/bits/vector.tcc:458:5: note: parameter passing for argument of type ‘std::vector::iterator {aka __gnu_cxx::__normal_iterator >}’ changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/7/vector:64:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkDataObject.h:31, from /usr/include/ITK-4.12/itkProcessObject.h:31, from /usr/include/ITK-4.12/itkImageRegistrationMethod.h:21, from /<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT/itkScaleInvariantFeatureImageFilter.h:47, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util/sift.cxx:7: /usr/include/c++/7/bits/stl_vector.h: In member function ‘itk::GaussianOperator::CoefficientVector itk::GaussianOperator::GenerateCoefficients() [with TPixel = double; unsigned int VDimension = 3; TAllocator = itk::NeighborhoodAllocator]’: /usr/include/c++/7/bits/stl_vector.h:1087:16: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(begin() + __offset, __n, __x); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/7/bits/stl_vector.h: In member function ‘itk::GaussianOperator::CoefficientVector itk::GaussianOperator::GenerateCoefficients() [with TPixel = float; unsigned int VDimension = 3; TAllocator = itk::NeighborhoodAllocator]’: /usr/include/c++/7/bits/stl_vector.h:1087:16: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(begin() + __offset, __n, __x); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 56%] Linking CXX shared library ../../../libplmutil.so cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmutil.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmutil.so.1.6 -o ../../../libplmutil.so.1.6 CMakeFiles/plmutil.dir/bspline_correspond.cxx.o CMakeFiles/plmutil.dir/dice_statistics.cxx.o CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o CMakeFiles/plmutil.dir/distance_map.cxx.o CMakeFiles/plmutil.dir/diff.cxx.o CMakeFiles/plmutil.dir/dvh.cxx.o CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o CMakeFiles/plmutil.dir/geometry_chooser.cxx.o CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o CMakeFiles/plmutil.dir/image_boundary.cxx.o CMakeFiles/plmutil.dir/image_center.cxx.o CMakeFiles/plmutil.dir/itk_adjust.cxx.o CMakeFiles/plmutil.dir/itk_distance_map.cxx.o CMakeFiles/plmutil.dir/itk_crop.cxx.o CMakeFiles/plmutil.dir/itk_gabor.cxx.o CMakeFiles/plmutil.dir/itk_mask.cxx.o CMakeFiles/plmutil.dir/itk_scale.cxx.o CMakeFiles/plmutil.dir/itk_threshold.cxx.o CMakeFiles/plmutil.dir/itk_union.cxx.o CMakeFiles/plmutil.dir/landmark_diff.cxx.o CMakeFiles/plmutil.dir/proj_image_filter.cxx.o CMakeFiles/plmutil.dir/plm_series.cxx.o CMakeFiles/plmutil.dir/plm_study.cxx.o CMakeFiles/plmutil.dir/rt_study_warp.cxx.o CMakeFiles/plmutil.dir/sift.cxx.o CMakeFiles/plmutil.dir/simplify_points.cxx.o CMakeFiles/plmutil.dir/ss_img_stats.cxx.o CMakeFiles/plmutil.dir/synthetic_mha.cxx.o CMakeFiles/plmutil.dir/synthetic_vf.cxx.o CMakeFiles/plmutil.dir/threshbox.cxx.o CMakeFiles/plmutil.dir/vf_invert.cxx.o CMakeFiles/plmutil.dir/gabor.cxx.o CMakeFiles/plmutil.dir/ramp_filter.cxx.o -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include -lfftw3f -lfftw3 ../../../libdevillard.a ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldlib -lnsl -lblas -llapack -lsqlite3 -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm ../../../libnkidecompress.a cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util && /usr/bin/cmake -E cmake_symlink_library ../../../libplmutil.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmutil.so make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 56%] Built target plmutil make -f src/plastimatch/register/CMakeFiles/plmregister.dir/build.make src/plastimatch/register/CMakeFiles/plmregister.dir/depend make -f src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/reconstruct /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register/CMakeFiles/plmregister.dir/DependInfo.cmake --color= Scanning dependencies of target plmreconstruct make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 57%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o [ 57%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/bowtie_correction.cxx cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/drr_trilin.cxx [ 57%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/plmreconstruct.dir/drr.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/drr.cxx [ 57%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/fdk.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/plmreconstruct.dir/fdk.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/fdk.cxx [ 57%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/fdk_util.cxx Scanning dependencies of target plmregister make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/register/CMakeFiles/plmregister.dir/build.make src/plastimatch/register/CMakeFiles/plmregister.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 58%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/plmregister.dir/bspline.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline.cxx [ 58%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_landmarks.cxx [ 58%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_gm.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/plmregister.dir/bspline_gm.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_gm.cxx [ 58%] Linking CXX shared library ../../../libplmreconstruct.so cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/reconstruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmreconstruct.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmreconstruct.so.1.6 -o ../../../libplmreconstruct.so.1.6 CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o CMakeFiles/plmreconstruct.dir/drr.cxx.o CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o CMakeFiles/plmreconstruct.dir/fdk.cxx.o CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3_threads -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm ../../../libnkidecompress.a -ldlib -lnsl -ljpeg -lpng -lblas -llapack -lsqlite3 -lpthread -ldl -lfftw3f -lfftw3 ../../../libdevillard.a [ 58%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_mi.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/plmregister.dir/bspline_mi.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_mi.cxx In file included from /usr/include/c++/7/vector:69:0, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_score.h:8, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_state.h:12, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_optimize.h:8, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline.cxx:43: /usr/include/c++/7/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type ‘std::vector::iterator {aka __gnu_cxx::__normal_iterator >}’ changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/7/bits/vector.tcc: In function ‘void bspline_score(Bspline_optimize*)’: /usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 59%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_mi_hist.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/bspline_mi_hist.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_mi_hist.cxx cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/reconstruct && /usr/bin/cmake -E cmake_symlink_library ../../../libplmreconstruct.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmreconstruct.so [ 59%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_mse.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/plmregister.dir/bspline_mse.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_mse.cxx make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 59%] Built target plmreconstruct [ 59%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/bspline_optimize.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_optimize.cxx /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_mi.cxx: In function ‘void bspline_mi_hist_lookup(long int*, long int*, long int*, float*, Bspline_mi_hist_set*, float, float)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_mi.cxx:213:32: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘plm_long {aka int}’ [-Wformat=] mi_hist->fixed.bins); ^ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_mi.cxx:213:32: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 7 has type ‘plm_long {aka int}’ [-Wformat=] [ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_optimize_lbfgsb.cxx [ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_optimize_liblbfgs.cxx [ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_optimize_nlopt.cxx [ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_optimize_steepest.cxx [ 61%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_parms.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/bspline_parms.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_parms.cxx [ 61%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_score.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/bspline_score.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_score.cxx [ 61%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_stage.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/bspline_stage.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_stage.cxx [ 61%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_state.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/bspline_state.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_state.cxx [ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/bspline_regularize.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_regularize.cxx [ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_regularize_analytic.cxx [ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_regularize_numeric.cxx [ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/bspline_regularize_semi_analytic.cxx [ 63%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/demons.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/demons.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/demons.cxx [ 63%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_align_center.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/itk_align_center.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_align_center.cxx [ 63%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_demons.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/itk_demons.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_demons.cxx [ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_demons_util.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/itk_demons_util.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_demons_util.cxx [ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx [ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_diff_demons.cxx [ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_log_demons.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/itk_log_demons.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_log_demons.cxx In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkDataObject.h:31, from /usr/include/ITK-4.12/itkProcessObject.h:31, from /usr/include/ITK-4.12/itkImageSource.h:31, from /usr/include/ITK-4.12/itkImageToImageFilter.h:31, from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, from /usr/include/ITK-4.12/itkFiniteDifferenceImageFilter.h:21, from /usr/include/ITK-4.12/itkDenseFiniteDifferenceImageFilter.h:21, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/itkPDEDeformableRegistrationWithMaskFilter.h:20, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons/itkDiffeomorphicDemonsRegistrationWithMaskFilter.h:21, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_diff_demons.h:7, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_diff_demons.cxx:5: /usr/include/ITK-4.12/itkWarpVectorImageFilter.h: In member function ‘void itk::WarpVectorImageFilter::SetEdgePaddingValue(itk::WarpVectorImageFilter::PixelType) [with TInputImage = itk::Image, 3>; TOutputImage = itk::Image, 3>; TDisplacementField = itk::Image, 3>]’: /usr/include/ITK-4.12/itkWarpVectorImageFilter.h:205:3: note: parameter passing for argument of type ‘const PixelType {aka const itk::Vector}’ changed in GCC 7.1 itkSetMacro(EdgePaddingValue, PixelType); ^ In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkDataObject.h:31, from /usr/include/ITK-4.12/itkProcessObject.h:31, from /usr/include/ITK-4.12/itkImageSource.h:31, from /usr/include/ITK-4.12/itkImageToImageFilter.h:31, from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, from /usr/include/ITK-4.12/itkFiniteDifferenceImageFilter.h:21, from /usr/include/ITK-4.12/itkDenseFiniteDifferenceImageFilter.h:21, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDeformableRegistrationFilter.h:4, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDemonsRegistrationFilterWithMaskExtension.h:4, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_log_demons.h:7, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_log_demons.cxx:5: /usr/include/ITK-4.12/itkWarpVectorImageFilter.h: In member function ‘void itk::WarpVectorImageFilter::SetEdgePaddingValue(itk::WarpVectorImageFilter::PixelType) [with TInputImage = itk::Image, 3>; TOutputImage = itk::Image, 3>; TDisplacementField = itk::Image, 3>]’: /usr/include/ITK-4.12/itkWarpVectorImageFilter.h:205:3: note: parameter passing for argument of type ‘const PixelType {aka const itk::Vector}’ changed in GCC 7.1 itkSetMacro(EdgePaddingValue, PixelType); ^ In file included from /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.h:252:0, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:26, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces/itkFastSymmetricForcesDemonsRegistrationWithMaskFilter.h:22, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_fsf_demons.h:7, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx:12: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘void itk::CentralDifferenceImageFunction::EvaluateSpecialized(const PointType&, itk::CentralDifferenceImageFunction::OutputType&, itk::CentralDifferenceImageFunction::OutputTypeSpecializationStructType::OutputType>) const [with Type = itk::CovariantVector; TInputImage = itk::Image; TCoordRep = double; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:284:1: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 CentralDifferenceImageFunction< TInputImage, TCoordRep, TOutputType > ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘itk::CentralDifferenceImageFunction::OutputType itk::CentralDifferenceImageFunction::Evaluate(const PointType&) const [with TInputImage = itk::Image; TCoordRep = double; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In function ‘itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘void itk::CentralDifferenceImageFunction::EvaluateSpecialized(const PointType&, itk::CentralDifferenceImageFunction::OutputType&, itk::CentralDifferenceImageFunction::OutputTypeSpecializationStructType::OutputType>) const [with Type = itk::CovariantVector; TInputImage = itk::Image; TCoordRep = float; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:284:1: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, float, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 CentralDifferenceImageFunction< TInputImage, TCoordRep, TOutputType > ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘itk::CentralDifferenceImageFunction::OutputType itk::CentralDifferenceImageFunction::Evaluate(const PointType&) const [with TInputImage = itk::Image; TCoordRep = float; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, float, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/7/vector:69:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkCommand.h:21, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx:9: /usr/include/c++/7/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/7/bits/vector.tcc:458:5: note: parameter passing for argument of type ‘std::vector::iterator {aka __gnu_cxx::__normal_iterator >}’ changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/7/bits/vector.tcc:458:5: note: parameter passing for argument of type ‘std::vector::iterator {aka __gnu_cxx::__normal_iterator >}’ changed in GCC 7.1 In file included from /usr/include/c++/7/vector:64:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkCommand.h:21, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx:9: /usr/include/c++/7/bits/stl_vector.h: In member function ‘itk::DenseFiniteDifferenceImageFilter::TimeStepType itk::DenseFiniteDifferenceImageFilter::CalculateChange() [with TInputImage = itk::Image, 3>; TOutputImage = itk::Image, 3>]’: /usr/include/c++/7/bits/stl_vector.h:712:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.h:252:0, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:26, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons/itkDiffeomorphicDemonsRegistrationWithMaskFilter.h:22, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_diff_demons.h:7, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_diff_demons.cxx:5: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘void itk::CentralDifferenceImageFunction::EvaluateSpecialized(const PointType&, itk::CentralDifferenceImageFunction::OutputType&, itk::CentralDifferenceImageFunction::OutputTypeSpecializationStructType::OutputType>) const [with Type = itk::CovariantVector; TInputImage = itk::Image; TCoordRep = double; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:284:1: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 CentralDifferenceImageFunction< TInputImage, TCoordRep, TOutputType > ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘itk::CentralDifferenceImageFunction::OutputType itk::CentralDifferenceImageFunction::Evaluate(const PointType&) const [with TInputImage = itk::Image; TCoordRep = double; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In function ‘itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 65%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_sym_log_demons.cxx /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘void itk::CentralDifferenceImageFunction::EvaluateSpecialized(const PointType&, itk::CentralDifferenceImageFunction::OutputType&, itk::CentralDifferenceImageFunction::OutputTypeSpecializationStructType::OutputType>) const [with Type = itk::CovariantVector; TInputImage = itk::Image; TCoordRep = float; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:284:1: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, float, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 CentralDifferenceImageFunction< TInputImage, TCoordRep, TOutputType > ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘itk::CentralDifferenceImageFunction::OutputType itk::CentralDifferenceImageFunction::Evaluate(const PointType&) const [with TInputImage = itk::Image; TCoordRep = float; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, float, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/7/vector:69:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkDataObject.h:31, from /usr/include/ITK-4.12/itkProcessObject.h:31, from /usr/include/ITK-4.12/itkImageSource.h:31, from /usr/include/ITK-4.12/itkImageToImageFilter.h:31, from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, from /usr/include/ITK-4.12/itkFiniteDifferenceImageFilter.h:21, from /usr/include/ITK-4.12/itkDenseFiniteDifferenceImageFilter.h:21, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/itkPDEDeformableRegistrationWithMaskFilter.h:20, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons/itkDiffeomorphicDemonsRegistrationWithMaskFilter.h:21, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_diff_demons.h:7, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_diff_demons.cxx:5: /usr/include/c++/7/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/7/bits/vector.tcc:458:5: note: parameter passing for argument of type ‘std::vector::iterator {aka __gnu_cxx::__normal_iterator >}’ changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/7/bits/vector.tcc:458:5: note: parameter passing for argument of type ‘std::vector::iterator {aka __gnu_cxx::__normal_iterator >}’ changed in GCC 7.1 /usr/include/c++/7/bits/stl_vector.h: In member function ‘itk::GaussianOperator::CoefficientVector itk::GaussianOperator::GenerateCoefficients() [with TPixel = float; unsigned int VDimension = 3; TAllocator = itk::NeighborhoodAllocator]’: /usr/include/c++/7/bits/stl_vector.h:1087:16: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(begin() + __offset, __n, __x); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/7/vector:64:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkDataObject.h:31, from /usr/include/ITK-4.12/itkProcessObject.h:31, from /usr/include/ITK-4.12/itkImageSource.h:31, from /usr/include/ITK-4.12/itkImageToImageFilter.h:31, from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, from /usr/include/ITK-4.12/itkFiniteDifferenceImageFilter.h:21, from /usr/include/ITK-4.12/itkDenseFiniteDifferenceImageFilter.h:21, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/itkPDEDeformableRegistrationWithMaskFilter.h:20, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons/itkDiffeomorphicDemonsRegistrationWithMaskFilter.h:21, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_diff_demons.h:7, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_diff_demons.cxx:5: /usr/include/c++/7/bits/stl_vector.h: In member function ‘itk::DenseFiniteDifferenceImageFilter::TimeStepType itk::DenseFiniteDifferenceImageFilter::CalculateChange() [with TInputImage = itk::Image, 3>; TOutputImage = itk::Image, 3>]’: /usr/include/c++/7/bits/stl_vector.h:712:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 65%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/demons_cpu.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/demons_cpu.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/demons_cpu.cxx In file included from /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.h:252:0, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:26, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDemonsRegistrationFilterWithMaskExtension.h:5, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_log_demons.h:7, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_log_demons.cxx:5: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘void itk::CentralDifferenceImageFunction::EvaluateSpecialized(const PointType&, itk::CentralDifferenceImageFunction::OutputType&, itk::CentralDifferenceImageFunction::OutputTypeSpecializationStructType::OutputType>) const [with Type = itk::CovariantVector; TInputImage = itk::Image; TCoordRep = double; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:284:1: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 CentralDifferenceImageFunction< TInputImage, TCoordRep, TOutputType > ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘itk::CentralDifferenceImageFunction::OutputType itk::CentralDifferenceImageFunction::Evaluate(const PointType&) const [with TInputImage = itk::Image; TCoordRep = double; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In function ‘itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 65%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/demons_state.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/demons_state.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/demons_state.cxx /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘void itk::CentralDifferenceImageFunction::EvaluateSpecialized(const PointType&, itk::CentralDifferenceImageFunction::OutputType&, itk::CentralDifferenceImageFunction::OutputTypeSpecializationStructType::OutputType>) const [with Type = itk::CovariantVector; TInputImage = itk::Image; TCoordRep = float; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:284:1: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, float, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 CentralDifferenceImageFunction< TInputImage, TCoordRep, TOutputType > ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘itk::CentralDifferenceImageFunction::OutputType itk::CentralDifferenceImageFunction::Evaluate(const PointType&) const [with TInputImage = itk::Image; TCoordRep = float; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, float, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 65%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/gpuit_demons.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/gpuit_demons.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/gpuit_demons.cxx In file included from /usr/include/c++/7/vector:69:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkDataObject.h:31, from /usr/include/ITK-4.12/itkProcessObject.h:31, from /usr/include/ITK-4.12/itkImageSource.h:31, from /usr/include/ITK-4.12/itkImageToImageFilter.h:31, from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, from /usr/include/ITK-4.12/itkFiniteDifferenceImageFilter.h:21, from /usr/include/ITK-4.12/itkDenseFiniteDifferenceImageFilter.h:21, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDeformableRegistrationFilter.h:4, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDemonsRegistrationFilterWithMaskExtension.h:4, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_log_demons.h:7, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_log_demons.cxx:5: /usr/include/c++/7/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/7/bits/vector.tcc:458:5: note: parameter passing for argument of type ‘std::vector::iterator {aka __gnu_cxx::__normal_iterator >}’ changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/7/bits/stl_vector.h: In member function ‘itk::GaussianOperator::CoefficientVector itk::GaussianOperator::GenerateCoefficients() [with TPixel = float; unsigned int VDimension = 3; TAllocator = itk::NeighborhoodAllocator]’: /usr/include/c++/7/bits/stl_vector.h:1087:16: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(begin() + __offset, __n, __x); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/7/vector:64:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkDataObject.h:31, from /usr/include/ITK-4.12/itkProcessObject.h:31, from /usr/include/ITK-4.12/itkImageSource.h:31, from /usr/include/ITK-4.12/itkImageToImageFilter.h:31, from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, from /usr/include/ITK-4.12/itkFiniteDifferenceImageFilter.h:21, from /usr/include/ITK-4.12/itkDenseFiniteDifferenceImageFilter.h:21, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDeformableRegistrationFilter.h:4, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDemonsRegistrationFilterWithMaskExtension.h:4, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_log_demons.h:7, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_log_demons.cxx:5: /usr/include/c++/7/bits/stl_vector.h: In member function ‘itk::DenseFiniteDifferenceImageFilter::TimeStepType itk::DenseFiniteDifferenceImageFilter::CalculateChange() [with TInputImage = itk::Image, 3>; TOutputImage = itk::Image, 3>]’: /usr/include/c++/7/bits/stl_vector.h:712:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_optimizer.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/itk_optimizer.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_optimizer.cxx [ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_registration.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/itk_registration.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_registration.cxx In file included from /usr/include/ITK-4.12/itkLightObject.h:21:0, from /usr/include/ITK-4.12/itkObject.h:31, from /usr/include/ITK-4.12/itkDataObject.h:31, from /usr/include/ITK-4.12/itkProcessObject.h:31, from /usr/include/ITK-4.12/itkImageSource.h:31, from /usr/include/ITK-4.12/itkImageToImageFilter.h:31, from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, from /usr/include/ITK-4.12/itkFiniteDifferenceImageFilter.h:21, from /usr/include/ITK-4.12/itkDenseFiniteDifferenceImageFilter.h:21, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDeformableRegistrationFilter.h:4, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkSymmetricLogDomainDemonsRegistrationFilterWithMaskExtension.h:4, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_sym_log_demons.h:7, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_sym_log_demons.cxx:6: /usr/include/ITK-4.12/itkWarpVectorImageFilter.h: In member function ‘void itk::WarpVectorImageFilter::SetEdgePaddingValue(itk::WarpVectorImageFilter::PixelType) [with TInputImage = itk::Image, 3>; TOutputImage = itk::Image, 3>; TDisplacementField = itk::Image, 3>]’: /usr/include/ITK-4.12/itkWarpVectorImageFilter.h:205:3: note: parameter passing for argument of type ‘const PixelType {aka const itk::Vector}’ changed in GCC 7.1 itkSetMacro(EdgePaddingValue, PixelType); ^ /usr/include/c++/7/bits/stl_vector.h: In member function ‘itk::GaussianOperator::CoefficientVector itk::GaussianOperator::GenerateCoefficients() [with TPixel = float; unsigned int VDimension = 3; TAllocator = itk::NeighborhoodAllocator]’: /usr/include/c++/7/bits/stl_vector.h:1087:16: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(begin() + __offset, __n, __x); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_registration_observer.cxx [ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_tps.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/itk_tps.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_tps.cxx [ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/landmark_warp.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/landmark_warp.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/landmark_warp.cxx In file included from /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.h:252:0, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:26, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkSymmetricLogDomainDemonsRegistrationFilterWithMaskExtension.h:5, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_sym_log_demons.h:7, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_sym_log_demons.cxx:6: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘void itk::CentralDifferenceImageFunction::EvaluateSpecialized(const PointType&, itk::CentralDifferenceImageFunction::OutputType&, itk::CentralDifferenceImageFunction::OutputTypeSpecializationStructType::OutputType>) const [with Type = itk::CovariantVector; TInputImage = itk::Image; TCoordRep = double; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:284:1: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 CentralDifferenceImageFunction< TInputImage, TCoordRep, TOutputType > ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘itk::CentralDifferenceImageFunction::OutputType itk::CentralDifferenceImageFunction::Evaluate(const PointType&) const [with TInputImage = itk::Image; TCoordRep = double; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In function ‘itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘void itk::CentralDifferenceImageFunction::EvaluateSpecialized(const PointType&, itk::CentralDifferenceImageFunction::OutputType&, itk::CentralDifferenceImageFunction::OutputTypeSpecializationStructType::OutputType>) const [with Type = itk::CovariantVector; TInputImage = itk::Image; TCoordRep = float; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:284:1: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, float, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 CentralDifferenceImageFunction< TInputImage, TCoordRep, TOutputType > ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘itk::CentralDifferenceImageFunction::OutputType itk::CentralDifferenceImageFunction::Evaluate(const PointType&) const [with TInputImage = itk::Image; TCoordRep = float; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, float, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/process_parms.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/process_parms.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/process_parms.cxx In file included from /usr/include/c++/7/vector:69:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkDataObject.h:31, from /usr/include/ITK-4.12/itkProcessObject.h:31, from /usr/include/ITK-4.12/itkImageSource.h:31, from /usr/include/ITK-4.12/itkImageToImageFilter.h:31, from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, from /usr/include/ITK-4.12/itkFiniteDifferenceImageFilter.h:21, from /usr/include/ITK-4.12/itkDenseFiniteDifferenceImageFilter.h:21, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDeformableRegistrationFilter.h:4, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkSymmetricLogDomainDemonsRegistrationFilterWithMaskExtension.h:4, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_sym_log_demons.h:7, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_sym_log_demons.cxx:6: /usr/include/c++/7/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/7/bits/vector.tcc:458:5: note: parameter passing for argument of type ‘std::vector::iterator {aka __gnu_cxx::__normal_iterator >}’ changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/7/bits/vector.tcc:458:5: note: parameter passing for argument of type ‘std::vector::iterator {aka __gnu_cxx::__normal_iterator >}’ changed in GCC 7.1 [ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_cluster.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/rbf_cluster.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/rbf_cluster.cxx In file included from /usr/include/c++/7/vector:64:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkDataObject.h:31, from /usr/include/ITK-4.12/itkProcessObject.h:31, from /usr/include/ITK-4.12/itkImageSource.h:31, from /usr/include/ITK-4.12/itkImageToImageFilter.h:31, from /usr/include/ITK-4.12/itkInPlaceImageFilter.h:31, from /usr/include/ITK-4.12/itkFiniteDifferenceImageFilter.h:21, from /usr/include/ITK-4.12/itkDenseFiniteDifferenceImageFilter.h:21, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDeformableRegistrationFilter.h:4, from /<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkSymmetricLogDomainDemonsRegistrationFilterWithMaskExtension.h:4, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_sym_log_demons.h:7, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_sym_log_demons.cxx:6: /usr/include/c++/7/bits/stl_vector.h: In member function ‘itk::DenseFiniteDifferenceImageFilter::TimeStepType itk::DenseFiniteDifferenceImageFilter::CalculateChange() [with TInputImage = itk::Image, 3>; TOutputImage = itk::Image, 3>]’: /usr/include/c++/7/bits/stl_vector.h:712:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_gauss.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/rbf_gauss.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/rbf_gauss.cxx [ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_wendland.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/rbf_wendland.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/rbf_wendland.cxx [ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/registration.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/registration.cxx /usr/include/c++/7/bits/stl_vector.h: In member function ‘itk::GaussianOperator::CoefficientVector itk::GaussianOperator::GenerateCoefficients() [with TPixel = float; unsigned int VDimension = 3; TAllocator = itk::NeighborhoodAllocator]’: /usr/include/c++/7/bits/stl_vector.h:1087:16: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(begin() + __offset, __n, __x); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_data.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/registration_data.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/registration_data.cxx [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_metric_type.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/registration_metric_type.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/registration_metric_type.cxx [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_parms.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/registration_parms.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/registration_parms.cxx [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_resample.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/registration_resample.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/registration_resample.cxx [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/shared_parms.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/shared_parms.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/shared_parms.cxx [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/stage_parms.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/stage_parms.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/stage_parms.cxx In file included from /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.h:252:0, from /usr/include/ITK-4.12/itkImageToImageMetric.h:26, from /usr/include/ITK-4.12/itkMutualInformationImageToImageMetric.h:21, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_registration.cxx:13: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘void itk::CentralDifferenceImageFunction::EvaluateSpecialized(const PointType&, itk::CentralDifferenceImageFunction::OutputType&, itk::CentralDifferenceImageFunction::OutputTypeSpecializationStructType::OutputType>) const [with Type = itk::CovariantVector; TInputImage = itk::Image; TCoordRep = double; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:284:1: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 CentralDifferenceImageFunction< TInputImage, TCoordRep, TOutputType > ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘void itk::MutualInformationImageToImageMetric::CalculateDerivatives(const FixedImagePointType&, itk::MutualInformationImageToImageMetric::DerivativeType&, itk::MutualInformationImageToImageMetric::TransformJacobianType&) const [with TFixedImage = itk::Image; TMovingImage = itk::Image]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘void itk::ImageToImageMetric::ComputeImageDerivatives(const MovingImagePointType&, itk::ImageToImageMetric::ImageDerivativesType&, itk::ThreadIdType) const [with TFixedImage = itk::Image; TMovingImage = itk::Image]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/translation_grid_search.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/translation_grid_search.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/translation_grid_search.cxx In file included from /usr/include/c++/7/vector:69:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkCenteredTransformInitializer.h:21, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_registration.cxx:9: /usr/include/c++/7/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/7/bits/vector.tcc:458:5: note: parameter passing for argument of type ‘std::vector::iterator {aka __gnu_cxx::__normal_iterator >}’ changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/translation_mi.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/translation_mi.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/translation_mi.cxx [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/translation_mse.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmregister.dir/translation_mse.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/translation_mse.cxx In file included from /usr/include/c++/7/vector:64:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkCenteredTransformInitializer.h:21, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/itk_registration.cxx:9: /usr/include/c++/7/bits/stl_vector.h: In member function ‘void itk::MattesMutualInformationImageToImageMetric::Initialize() [with TFixedImage = itk::Image; TMovingImage = itk::Image]’: /usr/include/c++/7/bits/stl_vector.h:712:18: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 71%] Linking CXX shared library ../../../libplmregister.so cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmregister.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmregister.so.1.6 -o ../../../libplmregister.so.1.6 CMakeFiles/plmregister.dir/bspline.cxx.o CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o CMakeFiles/plmregister.dir/bspline_gm.cxx.o CMakeFiles/plmregister.dir/bspline_mi.cxx.o CMakeFiles/plmregister.dir/bspline_mi_hist.cxx.o CMakeFiles/plmregister.dir/bspline_mse.cxx.o CMakeFiles/plmregister.dir/bspline_optimize.cxx.o CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o CMakeFiles/plmregister.dir/bspline_parms.cxx.o CMakeFiles/plmregister.dir/bspline_score.cxx.o CMakeFiles/plmregister.dir/bspline_stage.cxx.o CMakeFiles/plmregister.dir/bspline_state.cxx.o CMakeFiles/plmregister.dir/bspline_regularize.cxx.o CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o CMakeFiles/plmregister.dir/demons.cxx.o CMakeFiles/plmregister.dir/itk_align_center.cxx.o CMakeFiles/plmregister.dir/itk_demons.cxx.o CMakeFiles/plmregister.dir/itk_demons_util.cxx.o CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o CMakeFiles/plmregister.dir/itk_log_demons.cxx.o CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o CMakeFiles/plmregister.dir/demons_cpu.cxx.o CMakeFiles/plmregister.dir/demons_state.cxx.o CMakeFiles/plmregister.dir/gpuit_demons.cxx.o CMakeFiles/plmregister.dir/itk_optimizer.cxx.o CMakeFiles/plmregister.dir/itk_registration.cxx.o CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o CMakeFiles/plmregister.dir/itk_tps.cxx.o CMakeFiles/plmregister.dir/landmark_warp.cxx.o CMakeFiles/plmregister.dir/process_parms.cxx.o CMakeFiles/plmregister.dir/rbf_cluster.cxx.o 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/usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3_threads -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm ../../../libnkidecompress.a ../../../libplmsys.so.1.6 -ldlib -lnsl -ljpeg -lpng -lblas -llapack -lsqlite3 -lpthread -ldl -lfftw3f -lfftw3 ../../../libdevillard.a cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register && /usr/bin/cmake -E cmake_symlink_library ../../../libplmregister.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmregister.so make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 71%] Built target plmregister make -f src/plastimatch/segment/CMakeFiles/plmsegment.dir/build.make src/plastimatch/segment/CMakeFiles/plmsegment.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment/CMakeFiles/plmsegment.dir/DependInfo.cmake --color= Scanning dependencies of target plmsegment make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/segment/CMakeFiles/plmsegment.dir/build.make src/plastimatch/segment/CMakeFiles/plmsegment.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 71%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsegment.dir/autolabel.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/autolabel.cxx [ 71%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/autolabel_parms.cxx [ 71%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/autolabel_feature.cxx [ 72%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx [ 72%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_task.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsegment.dir/autolabel_task.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/autolabel_task.cxx [ 72%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/autolabel_thumbnailer.cxx In file included from /usr/include/c++/7/vector:69:0, from /<>/plastimatch-1.6.5+dfsg.1/libs/ransac/ParametersEstimator.h:4, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.h:8, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:12: /usr/include/c++/7/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type ‘std::vector >::iterator {aka __gnu_cxx::__normal_iterator > >}’ changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/7/vector:64:0, from /<>/plastimatch-1.6.5+dfsg.1/libs/ransac/ParametersEstimator.h:4, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.h:8, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:12: /usr/include/c++/7/bits/stl_vector.h: In member function ‘virtual void itk::Autolabel_ransac_est::Estimate(std::vector*, std::allocator*> >&, std::vector >&)’: /usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/autolabel_trainer.cxx [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/dlib_trainer.cxx [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsegment.dir/mabs.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/mabs.cxx In file included from /usr/include/c++/7/vector:69:0, from /usr/include/dlib/is_kind.h:6, from /usr/include/dlib/matrix/matrix_exp.h:7, from /usr/include/dlib/matrix/matrix.h:6, from /usr/include/dlib/matrix.h:6, from /usr/include/dlib/data_io/libsvm_io.h:12, from /usr/include/dlib/data_io.h:6, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/autolabel.cxx:7: /usr/include/c++/7/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const itk::Point&}; _Tp = itk::Point; _Alloc = std::allocator >]’: /usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type ‘std::vector >::iterator {aka __gnu_cxx::__normal_iterator*, std::vector > >}’ changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/7/vector:64:0, from /usr/include/dlib/is_kind.h:6, from /usr/include/dlib/matrix/matrix_exp.h:7, from /usr/include/dlib/matrix/matrix.h:6, from /usr/include/dlib/matrix.h:6, from /usr/include/dlib/data_io/libsvm_io.h:12, from /usr/include/dlib/data_io.h:6, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/autolabel.cxx:7: /usr/include/c++/7/bits/stl_vector.h: In function ‘void autolabel_tsv1(Autolabel_parms*)’: /usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/mabs_atlas_selection.cxx [ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_parms.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsegment.dir/mabs_parms.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/mabs_parms.cxx [ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/mabs_seg_weights.cxx [ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_stats.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsegment.dir/mabs_stats.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/mabs_stats.cxx [ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_staple.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsegment.dir/mabs_staple.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/mabs_staple.cxx In file included from /usr/include/c++/7/vector:69:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/mabs_staple.cxx:6: /usr/include/c++/7/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type ‘std::vector::iterator {aka __gnu_cxx::__normal_iterator >}’ changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/7/vector:64:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/mabs_staple.cxx:6: /usr/include/c++/7/bits/stl_vector.h: In member function ‘void itk::STAPLEImageFilter::GenerateData() [with TInputImage = itk::Image; TOutputImage = itk::Image]’: /usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/7/list:64:0, from /usr/include/ITK-4.12/itkObjectFactoryBase.h:32, from /usr/include/ITK-4.12/itkObjectFactory.h:31, from /usr/include/ITK-4.12/itkImportImageContainer.h:22, from /usr/include/ITK-4.12/itkImage.h:22, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/mabs_atlas_selection.cxx:11: /usr/include/c++/7/bits/list.tcc: In member function ‘void std::__cxx11::list<_Tp, _Alloc>::_M_assign_dispatch(_InputIterator, _InputIterator, std::__false_type) [with _InputIterator = std::_List_iterator, double> >; _Tp = std::pair, double>; _Alloc = std::allocator, double> >]’: /usr/include/c++/7/bits/list.tcc:307:7: note: parameter passing for argument of type ‘std::_List_iterator, double> >’ changed in GCC 7.1 list<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~ /usr/include/c++/7/bits/list.tcc:307:7: note: parameter passing for argument of type ‘std::_List_iterator, double> >’ changed in GCC 7.1 [ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_vote.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/plmsegment.dir/mabs_vote.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/mabs_vote.cxx [ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/ml_convert.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsegment.dir/ml_convert.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/ml_convert.cxx [ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/segment_body.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -o CMakeFiles/plmsegment.dir/segment_body.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/segment_body.cxx In file included from /usr/include/c++/7/list:63:0, from /usr/include/ITK-4.12/itkObjectFactoryBase.h:32, from /usr/include/ITK-4.12/itkObjectFactory.h:31, from /usr/include/ITK-4.12/itkImportImageContainer.h:22, from /usr/include/ITK-4.12/itkImage.h:22, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/mabs_atlas_selection.cxx:11: /usr/include/c++/7/bits/stl_list.h: In member function ‘void Mabs_atlas_selection::similarity_ranking()’: /usr/include/c++/7/bits/stl_list.h:815:22: note: parameter passing for argument of type ‘std::_List_iterator, double> >’ changed in GCC 7.1 { _M_assign_dispatch(__first, __last, __false_type()); } ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.h:252:0, from /usr/include/ITK-4.12/itkImageToImageMetric.h:26, from /usr/include/ITK-4.12/itkMeanSquaresImageToImageMetric.h:21, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment/mabs_atlas_selection.cxx:13: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘void itk::CentralDifferenceImageFunction::EvaluateSpecialized(const PointType&, itk::CentralDifferenceImageFunction::OutputType&, itk::CentralDifferenceImageFunction::OutputTypeSpecializationStructType::OutputType>) const [with Type = itk::CovariantVector; TInputImage = itk::Image; TCoordRep = double; TOutputType = itk::CovariantVector]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:284:1: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 CentralDifferenceImageFunction< TInputImage, TCoordRep, TOutputType > ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx: In member function ‘void itk::ImageToImageMetric::ComputeImageDerivatives(const MovingImagePointType&, itk::ImageToImageMetric::ImageDerivativesType&, itk::ThreadIdType) const [with TFixedImage = itk::Image; TMovingImage = itk::Image]’: /usr/include/ITK-4.12/itkCentralDifferenceImageFunction.hxx:273:44: note: parameter passing for argument of type ‘itk::CentralDifferenceImageFunction, double, itk::CovariantVector >::OutputTypeSpecializationStructType >’ changed in GCC 7.1 EvaluateSpecialized( point, derivative, OutputTypeSpecializationStructType() ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 75%] Linking CXX shared library ../../../libplmsegment.so cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmsegment.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libplmsegment.so.1.6 -o ../../../libplmsegment.so.1.6 CMakeFiles/plmsegment.dir/autolabel.cxx.o CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o CMakeFiles/plmsegment.dir/autolabel_task.cxx.o CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o CMakeFiles/plmsegment.dir/mabs.cxx.o CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o CMakeFiles/plmsegment.dir/mabs_parms.cxx.o CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o CMakeFiles/plmsegment.dir/mabs_stats.cxx.o CMakeFiles/plmsegment.dir/mabs_staple.cxx.o CMakeFiles/plmsegment.dir/mabs_vote.cxx.o CMakeFiles/plmsegment.dir/ml_convert.cxx.o CMakeFiles/plmsegment.dir/segment_body.cxx.o -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../../../libplmregister.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm ../../../libnkidecompress.a -ldlib -lnsl -ljpeg -lpng -lblas -llapack -lsqlite3 -lpthread -ldl ../../../liblbfgs.a cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment && /usr/bin/cmake -E cmake_symlink_library ../../../libplmsegment.so.1.6 ../../../libplmsegment.so.1.6 ../../../libplmsegment.so make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 75%] Built target plmsegment make -f src/plastimatch/cli/CMakeFiles/landmark_warp.dir/build.make src/plastimatch/cli/CMakeFiles/landmark_warp.dir/depend make -f src/plastimatch/cli/CMakeFiles/plastimatch.dir/build.make src/plastimatch/cli/CMakeFiles/plastimatch.dir/depend make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/depend make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli/CMakeFiles/landmark_warp.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli/CMakeFiles/plastimatch.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/DependInfo.cmake --color= cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/DependInfo.cmake --color= Scanning dependencies of target bragg_curve make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 75%] Building CXX object src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/bragg_curve_main.cxx Scanning dependencies of target dicom_uid make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build Scanning dependencies of target landmark_warp make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/cli/CMakeFiles/landmark_warp.dir/build.make src/plastimatch/cli/CMakeFiles/landmark_warp.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 75%] Building CXX object src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/dicom_uid_main.cxx [ 75%] Building CXX object src/plastimatch/cli/CMakeFiles/landmark_warp.dir/landmark_warp_main.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/landmark_warp.dir/landmark_warp_main.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/landmark_warp_main.cxx [ 75%] Building CXX object src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/bragg_curve_opts.cxx [ 75%] Linking CXX executable ../../../bragg_curve cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/bragg_curve.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -o ../../../bragg_curve -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl Scanning dependencies of target plastimatch make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/cli/CMakeFiles/plastimatch.dir/build.make src/plastimatch/cli/CMakeFiles/plastimatch.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 76%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_add.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_add.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_add.cxx make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 76%] Built target bragg_curve make -f src/plastimatch/standalone/CMakeFiles/proton_dose.dir/build.make src/plastimatch/standalone/CMakeFiles/proton_dose.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/proton_dose.dir/DependInfo.cmake --color= Scanning dependencies of target proton_dose make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/proton_dose.dir/build.make src/plastimatch/standalone/CMakeFiles/proton_dose.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/proton_dose.dir/proton_dose_main.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/proton_dose.dir/proton_dose_main.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/proton_dose_main.cxx [ 78%] Linking CXX executable ../../../dicom_uid cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dicom_uid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -o ../../../dicom_uid -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 78%] Built target dicom_uid make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/DependInfo.cmake --color= Scanning dependencies of target hnd_to_pfm make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/hnd_to_pfm.cxx [ 78%] Linking CXX executable ../../../proton_dose cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/proton_dose.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/proton_dose.dir/proton_dose_main.cxx.o -o ../../../proton_dose -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl [ 78%] Linking CXX executable ../../../hnd_to_pfm cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/hnd_to_pfm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -o ../../../hnd_to_pfm -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 78%] Built target proton_dose make -f src/plastimatch/standalone/CMakeFiles/fdk.dir/build.make src/plastimatch/standalone/CMakeFiles/fdk.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/fdk.dir/DependInfo.cmake --color= Scanning dependencies of target fdk make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/fdk.dir/build.make src/plastimatch/standalone/CMakeFiles/fdk.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/fdk.dir/fdk_main.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/fdk.dir/fdk_main.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/fdk_main.cxx [ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/fdk.dir/fdk_opts.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/fdk.dir/fdk_opts.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/fdk_opts.cxx make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 78%] Built target hnd_to_pfm make -f src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build.make src/plastimatch/standalone/CMakeFiles/compute_distance.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/compute_distance.dir/DependInfo.cmake --color= Scanning dependencies of target compute_distance make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build.make src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/compute_distance.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/compute_distance.dir/compute_distance.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/compute_distance.cxx [ 79%] Linking CXX executable ../../../fdk cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/fdk.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/fdk.dir/fdk_main.cxx.o CMakeFiles/fdk.dir/fdk_opts.cxx.o -o ../../../fdk -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 79%] Built target fdk make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/DependInfo.cmake --color= Scanning dependencies of target landmark_diff make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 79%] Building CXX object src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/landmark_diff_main.cxx [ 80%] Linking CXX executable ../../../landmark_diff cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/landmark_diff.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -o ../../../landmark_diff -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 80%] Built target landmark_diff make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/sobp.dir/DependInfo.cmake --color= Scanning dependencies of target sobp make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 80%] Building CXX object src/plastimatch/standalone/CMakeFiles/sobp.dir/sobp_main.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/sobp.dir/sobp_main.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/sobp_main.cxx [ 80%] Linking CXX executable ../../../landmark_warp cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/landmark_warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/landmark_warp.dir/landmark_warp_main.cxx.o -o ../../../landmark_warp -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../clp/libplmclp.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl [ 81%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/closest_point.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/compute_distance.dir/closest_point.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/closest_point.cxx make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 81%] Built target landmark_warp make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/dicom_info.dir/DependInfo.cmake --color= Scanning dependencies of target dicom_info make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 81%] Building CXX object src/plastimatch/standalone/CMakeFiles/dicom_info.dir/dicom_info.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/dicom_info.dir/dicom_info.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/dicom_info.cxx [ 81%] Linking CXX executable ../../../sobp cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/sobp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/sobp.dir/sobp_main.cxx.o -o ../../../sobp -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 81%] Built target sobp make -f src/plastimatch/standalone/CMakeFiles/vf_invert.dir/build.make src/plastimatch/standalone/CMakeFiles/vf_invert.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/vf_invert.dir/DependInfo.cmake --color= Scanning dependencies of target vf_invert make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/vf_invert.dir/build.make src/plastimatch/standalone/CMakeFiles/vf_invert.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 81%] Building CXX object src/plastimatch/standalone/CMakeFiles/vf_invert.dir/vf_invert_main.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/vf_invert.dir/vf_invert_main.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/vf_invert_main.cxx [ 81%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/read_obj.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/compute_distance.dir/read_obj.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/read_obj.cxx [ 81%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_adjust.cxx [ 81%] Linking CXX executable ../../../compute_distance cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/compute_distance.dir/compute_distance.cxx.o CMakeFiles/compute_distance.dir/closest_point.cxx.o CMakeFiles/compute_distance.dir/read_obj.cxx.o -o ../../../compute_distance -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 81%] Built target compute_distance make -f src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build.make src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/DependInfo.cmake --color= Scanning dependencies of target xvi_archive make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build.make src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 81%] Building CXX object src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/xvi_archive.cxx [ 81%] Linking CXX executable ../../../vf_invert cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/vf_invert.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/vf_invert.dir/vf_invert_main.cxx.o -o ../../../vf_invert -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl [ 81%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_autolabel_train.cxx [ 81%] Linking CXX executable ../../../dicom_info cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dicom_info.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/dicom_info.dir/dicom_info.cxx.o -o ../../../dicom_info -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 81%] Built target vf_invert [ 81%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_autolabel.cxx make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 81%] Built target dicom_info make -f src/plastimatch/standalone/CMakeFiles/group_add.dir/build.make src/plastimatch/standalone/CMakeFiles/group_add.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/group_add.dir/DependInfo.cmake --color= Scanning dependencies of target group_add make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/group_add.dir/build.make src/plastimatch/standalone/CMakeFiles/group_add.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 82%] Building CXX object src/plastimatch/standalone/CMakeFiles/group_add.dir/group_add.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/group_add.dir/group_add.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/group_add.cxx [ 83%] Linking CXX executable ../../../xvi_archive cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/xvi_archive.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -o ../../../xvi_archive -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../libinih.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl [ 84%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_benchmark.cxx [ 84%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_boundary.cxx make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 84%] Built target xvi_archive make -f src/plastimatch/standalone/CMakeFiles/drr.dir/build.make src/plastimatch/standalone/CMakeFiles/drr.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/drr.dir/DependInfo.cmake --color= Scanning dependencies of target drr make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/drr.dir/build.make src/plastimatch/standalone/CMakeFiles/drr.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 84%] Building CXX object src/plastimatch/standalone/CMakeFiles/drr.dir/drr_main.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/drr.dir/drr_main.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/drr_main.cxx [ 85%] Building CXX object src/plastimatch/standalone/CMakeFiles/drr.dir/drr_opts.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/drr.dir/drr_opts.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/drr_opts.cxx In file included from /usr/include/c++/7/vector:69:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image.h:10, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/plm_image.h:9, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/aperture.h:8, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/group_add.cxx:9: /usr/include/c++/7/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const group_add_parms&}; _Tp = group_add_parms; _Alloc = std::allocator]’: /usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type ‘std::vector::iterator {aka __gnu_cxx::__normal_iterator >}’ changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/7/vector:64:0, from /usr/include/ITK-4.12/itkMetaDataDictionary.h:22, from /usr/include/ITK-4.12/itkObject.h:33, from /usr/include/ITK-4.12/itkRegion.h:31, from /usr/include/ITK-4.12/itkImageRegion.h:31, from /usr/include/ITK-4.12/itkImage.h:21, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/itk_image.h:10, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/plm_image.h:9, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base/aperture.h:8, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/group_add.cxx:9: /usr/include/c++/7/bits/stl_vector.h: In function ‘void parse_group(int, char**, int, std::vector*)’: /usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 85%] Linking CXX executable ../../../drr cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/drr.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/drr.dir/drr_main.cxx.o CMakeFiles/drr.dir/drr_opts.cxx.o -o ../../../drr -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 85%] Built target drr make -f src/plastimatch/standalone/CMakeFiles/filter.dir/build.make src/plastimatch/standalone/CMakeFiles/filter.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/filter.dir/DependInfo.cmake --color= Scanning dependencies of target filter make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/filter.dir/build.make src/plastimatch/standalone/CMakeFiles/filter.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 85%] Building CXX object src/plastimatch/standalone/CMakeFiles/filter.dir/filter.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/filter.dir/filter.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/filter.cxx [ 85%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_compare.cxx [ 85%] Linking CXX executable ../../../group_add cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/group_add.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/group_add.dir/group_add.cxx.o -o ../../../group_add -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl [ 85%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_compose.cxx make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 85%] Built target group_add make -f src/plastimatch/standalone/CMakeFiles/cmd_prompt_launcher.dir/build.make src/plastimatch/standalone/CMakeFiles/cmd_prompt_launcher.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/cmd_prompt_launcher.dir/DependInfo.cmake --color= Scanning dependencies of target cmd_prompt_launcher make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/cmd_prompt_launcher.dir/build.make src/plastimatch/standalone/CMakeFiles/cmd_prompt_launcher.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 85%] Building CXX object src/plastimatch/standalone/CMakeFiles/cmd_prompt_launcher.dir/cmd_prompt_launcher.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/cmd_prompt_launcher.dir/cmd_prompt_launcher.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/cmd_prompt_launcher.cxx [ 85%] Linking CXX executable ../../../cmd_prompt_launcher cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmd_prompt_launcher.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/cmd_prompt_launcher.dir/cmd_prompt_launcher.cxx.o -o ../../../cmd_prompt_launcher -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl [ 86%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_crop.cxx make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 86%] Built target cmd_prompt_launcher make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/DependInfo.cmake --color= Scanning dependencies of target merge_vfs make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 86%] Building CXX object src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/merge_vector_fields.cxx [ 86%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_dice.cxx [ 86%] Linking CXX executable ../../../filter cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/filter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/filter.dir/filter.cxx.o -o ../../../filter -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 86%] Built target filter make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/wed.dir/DependInfo.cmake --color= Scanning dependencies of target wed make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 87%] Building CXX object src/plastimatch/standalone/CMakeFiles/wed.dir/wed_main.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/wed.dir/wed_main.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/wed_main.cxx [ 87%] Linking CXX executable ../../../wed cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/wed.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/wed.dir/wed_main.cxx.o -o ../../../wed -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl [ 87%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_diff.cxx make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 87%] Built target wed make -f src/plastimatch/standalone/CMakeFiles/bspline.dir/build.make src/plastimatch/standalone/CMakeFiles/bspline.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/bspline.dir/DependInfo.cmake --color= Scanning dependencies of target bspline make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/bspline.dir/build.make src/plastimatch/standalone/CMakeFiles/bspline.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 88%] Building CXX object src/plastimatch/standalone/CMakeFiles/bspline.dir/bspline_main.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/bspline.dir/bspline_main.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/bspline_main.cxx [ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_dmap.cxx [ 89%] Building CXX object src/plastimatch/standalone/CMakeFiles/bspline.dir/bspline_opts.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/bspline.dir/bspline_opts.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/bspline_opts.cxx [ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_drr.cxx [ 89%] Linking CXX executable ../../../bspline cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/bspline.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/bspline.dir/bspline_main.cxx.o CMakeFiles/bspline.dir/bspline_opts.cxx.o -o ../../../bspline -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 89%] Built target bspline make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/check_grad.dir/DependInfo.cmake --color= Scanning dependencies of target check_grad make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 89%] Building CXX object src/plastimatch/standalone/CMakeFiles/check_grad.dir/check_grad.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/check_grad.dir/check_grad.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/check_grad.cxx [ 89%] Linking CXX executable ../../../merge_vfs cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/merge_vfs.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -o ../../../merge_vfs -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 89%] Built target merge_vfs make -f src/plastimatch/standalone/CMakeFiles/demons.dir/build.make src/plastimatch/standalone/CMakeFiles/demons.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/demons.dir/DependInfo.cmake --color= Scanning dependencies of target demons make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/demons.dir/build.make src/plastimatch/standalone/CMakeFiles/demons.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 89%] Building CXX object src/plastimatch/standalone/CMakeFiles/demons.dir/demons_main.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/demons.dir/demons_main.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/demons_main.cxx [ 90%] Building CXX object src/plastimatch/standalone/CMakeFiles/demons.dir/demons_opts.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/demons.dir/demons_opts.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/demons_opts.cxx [ 90%] Linking CXX executable ../../../demons cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/demons.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/demons.dir/demons_main.cxx.o CMakeFiles/demons.dir/demons_opts.cxx.o -o ../../../demons -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl [ 90%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_dvh.cxx make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 90%] Built target demons make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/DependInfo.cmake --color= Scanning dependencies of target shuffle_mha make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 91%] Building CXX object src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/shuffle_mha_main.cxx [ 91%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_filter.cxx [ 92%] Linking CXX executable ../../../check_grad cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/check_grad.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/check_grad.dir/check_grad.cxx.o -o ../../../check_grad -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl [ 92%] Linking CXX executable ../../../shuffle_mha cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/shuffle_mha.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -o ../../../shuffle_mha -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 92%] Built target check_grad make -f src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build.make src/plastimatch/standalone/CMakeFiles/dlib_train.dir/depend make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/dlib_train.dir/DependInfo.cmake --color= Scanning dependencies of target dlib_train make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build.make src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 92%] Building CXX object src/plastimatch/standalone/CMakeFiles/dlib_train.dir/dlib_train.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/dlib_train.dir/dlib_train.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/dlib_train.cxx make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 92%] Built target shuffle_mha [ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_gamma.cxx [ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_header.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_header.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_header.cxx [ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_jacobian.cxx [ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_mabs.cxx [ 94%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_mask.cxx [ 94%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_maximum.cxx In file included from /usr/include/c++/7/vector:69:0, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/dlib_train.cxx:10: /usr/include/c++/7/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = dlib::std_allocator >]’: /usr/include/c++/7/bits/vector.tcc:394:7: note: parameter passing for argument of type ‘std::vector > >::iterator {aka __gnu_cxx::__normal_iterator > > >}’ changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_ml_convert.cxx [ 94%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_multiply.cxx In file included from /usr/include/c++/7/map:60:0, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/dlib_train.cxx:9: /usr/include/c++/7/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = long unsigned int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]’: /usr/include/c++/7/bits/stl_tree.h:2130:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator {aka std::_Rb_tree_const_iterator >}’ changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_probe.cxx In file included from /usr/include/c++/7/vector:69:0, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/dlib_train.cxx:10: /usr/include/c++/7/bits/vector.tcc: In member function ‘void dlib::krls::train(const sample_type&, dlib::krls::scalar_type) [with kernel_type = dlib::radial_basis_kernel >]’: /usr/include/c++/7/bits/vector.tcc:105:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/7/vector:64:0, from /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone/dlib_train.cxx:10: /usr/include/c++/7/bits/stl_vector.h:948:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > > >’ changed in GCC 7.1 _M_realloc_insert(end(), __x); ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_register.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_register.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_register.cxx [ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_resample.cxx [ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_scale.cxx [ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_segment.cxx [ 96%] Linking CXX executable ../../../dlib_train cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dlib_train.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/dlib_train.dir/dlib_train.cxx.o -o ../../../dlib_train -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 96%] Built target dlib_train [ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_sift.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_sift.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_sift.cxx [ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_stats.cxx [ 97%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_synth.cxx [ 97%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_synth_vf.cxx [ 97%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_threshold.cxx [ 97%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_thumbnail.cxx [ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_union.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_union.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_union.cxx [ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_warp.cxx [ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_warp_dij.cxx [ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_warp_pointset.cxx [ 99%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx: In function ‘void do_command_xio_dvh(int, char**)’: /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:46:7: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(buf, 200, fp); //XiO Dose Volume Histogram ~~~~~^~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:49:7: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(patientid, 200, fp); // patient ID, abcde1234 ~~~~~^~~~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:50:7: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(buf, 200, fp); // plan ~~~~~^~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:51:7: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(structurename, 200, fp); // structure name ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:52:7: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(buf, 200, fp); // N.NN mm resolution ~~~~~^~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:54:7: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(buf, 200, fp); // number of bins ~~~~~^~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:59:7: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(buf, 200, fp); // date ~~~~~^~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:60:7: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(buf, 200, fp); // table header: min bin dose (cGy), bin volume (cc) ~~~~~^~~~~~~~~~~~~~ /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:78:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] fgets(buf, 200, fp); ~~~~~^~~~~~~~~~~~~~ [ 99%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/pcmd_xf_convert.cxx [ 99%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/qt -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/opencl -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cuda -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base -I/<>/plastimatch-1.6.5+dfsg.1/src/plastimatch -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf -I/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/arm-linux-gnueabihf -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/<>/plastimatch-1.6.5+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/<>/plastimatch-1.6.5+dfsg.1/libs/nSIFT -I/<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9/include -I/<>/plastimatch-1.6.5+dfsg.1/libs -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac -I/<>/plastimatch-1.6.5+dfsg.1/libs/ransac/Common -I/<>/plastimatch-1.6.5+dfsg.1/libs/devillard -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -o CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o -c /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli/plastimatch_main.cxx [100%] Linking CXX executable ../../../plastimatch cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/plastimatch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/plastimatch-1.6.5+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -rdynamic -fopenmp CMakeFiles/plastimatch.dir/pcmd_add.cxx.o CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o CMakeFiles/plastimatch.dir/pcmd_header.cxx.o CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o CMakeFiles/plastimatch.dir/pcmd_register.cxx.o CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o CMakeFiles/plastimatch.dir/pcmd_sift.cxx.o CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o CMakeFiles/plastimatch.dir/pcmd_union.cxx.o CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o -o ../../../plastimatch -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 -L/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.6 ../../../libplmregister.so.1.6 ../../../libplmreconstruct.so.1.6 ../../../libplmdose.so.1.6 ../../../libplmutil.so.1.6 ../../../libplmbase.so.1.6 ../../../libplmsys.so.1.6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5_cpp.so /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 -ldlib -lpthread -lnsl -lpng -ljpeg -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../clp/libplmclp.a ../../../liblbfgs.a -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/arm-linux-gnueabihf/libgdcmMSFF.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDICT.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmIOD.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmDSED.so.2.8.2 /usr/lib/arm-linux-gnueabihf/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ljpeg -lpng -ldl make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [100%] Built target plastimatch make[2]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/CMakeFiles 0 make[1]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' debian/rules override_dh_auto_test make[1]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1' dh_auto_test || true make -j4 test ARGS\+=-j4 make[2]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' Running tests... /usr/bin/ctest --force-new-ctest-process -j4 Test project /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf Start 4: gauss-1 Start 5: gauss-2 Start 6: gauss-3 Start 8: gauss-5 1/436 Test #6: gauss-3 ............................... Passed 0.22 sec 2/436 Test #5: gauss-2 ............................... Passed 0.22 sec Start 19: rect-1 Start 1: black-1 3/436 Test #4: gauss-1 ............................... Passed 0.23 sec 4/436 Test #8: gauss-5 ............................... Passed 0.22 sec 5/436 Test #1: black-1 ............................... Passed 0.19 sec Start 2: donut-1 Start 7: gauss-4 Start 9: gauss-6 6/436 Test #19: rect-1 ................................ Passed 0.37 sec 7/436 Test #9: gauss-6 ............................... Passed 0.21 sec Start 11: gauss-double-1 Start 12: gauss-double-2 8/436 Test #7: gauss-4 ............................... Passed 0.33 sec 9/436 Test #2: donut-1 ............................... Passed 0.53 sec Start 13: gauss-ushort-1 Start 14: gauss-ushort-2 10/436 Test #12: gauss-double-2 ........................ Passed 0.21 sec 11/436 Test #11: gauss-double-1 ........................ Passed 0.22 sec 12/436 Test #13: gauss-ushort-1 ........................ Passed 0.20 sec Start 15: lung-1 Start 20: rect-2 Start 21: rect-2s 13/436 Test #14: gauss-ushort-2 ........................ Passed 0.22 sec Start 22: rect-3 14/436 Test #21: rect-2s ............................... Passed 0.51 sec 15/436 Test #20: rect-2 ................................ Passed 0.51 sec Start 23: rect-4 Start 24: rect-5 16/436 Test #23: rect-4 ................................ Passed 0.31 sec Start 30: rect-10-roi-1 17/436 Test #24: rect-5 ................................ Passed 0.31 sec 18/436 Test #22: rect-3 ................................ Passed 0.53 sec Start 33: rect-11-roi Start 34: rect-12 19/436 Test #30: rect-10-roi-1 ......................... Passed 0.51 sec Start 35: rect-13 20/436 Test #33: rect-11-roi ........................... Passed 0.41 sec 21/436 Test #34: rect-12 ............................... Passed 0.41 sec Start 36: rect-14 Start 37: rect-15 22/436 Test #35: rect-13 ............................... Passed 0.23 sec 23/436 Test #15: lung-1 ................................ Passed 1.68 sec 24/436 Test #36: rect-14 ............................... Passed 0.21 sec Start 38: rect-16 Start 47: rectarr-03-a Start 52: sphere-1 25/436 Test #37: rect-15 ............................... Passed 0.22 sec 26/436 Test #52: sphere-1 .............................. Passed 0.20 sec 27/436 Test #47: rectarr-03-a .......................... Passed 0.20 sec Start 53: sphere-2 Start 54: sphere-3 Start 59: vf-zero 28/436 Test #59: vf-zero ............................... Passed 0.21 sec 29/436 Test #38: rect-16 ............................... Passed 0.43 sec 30/436 Test #53: sphere-2 .............................. Passed 0.22 sec Start 60: vf-trans-1 Start 61: vf-trans-2 Start 72: bspline-c 31/436 Test #54: sphere-3 .............................. Passed 0.33 sec 32/436 Test #60: vf-trans-1 ............................ Passed 0.20 sec Start 78: bspline-mi-c-1 Start 84: drr-a 33/436 Test #61: vf-trans-2 ............................ Passed 0.31 sec Start 130: plm-convert-dicom-a 34/436 Test #84: drr-a ................................. Passed 0.61 sec Start 198: plm-reg-itk-translation 35/436 Test #130: plm-convert-dicom-a ................... Passed 0.40 sec 36/436 Test #72: bspline-c ............................. Passed 1.10 sec Start 338: plm-reg-compose Start 419: plm-xf-convert-d 37/436 Test #198: plm-reg-itk-translation ............... Passed 0.62 sec Start 16: lung-2 38/436 Test #338: plm-reg-compose ....................... Passed 0.38 sec 39/436 Test #419: plm-xf-convert-d ...................... Passed 0.37 sec Start 27: rect-8 Start 28: rect-9 40/436 Test #27: rect-8 ................................ Passed 0.42 sec 41/436 Test #28: rect-9 ................................ Passed 0.41 sec Start 42: rectarr-01-a Start 48: rectarr-03 42/436 Test #78: bspline-mi-c-1 ........................ Passed 2.23 sec 43/436 Test #48: rectarr-03 ............................ Passed 0.20 sec Start 49: rectarr-04 Start 62: vf-radial-1 44/436 Test #42: rectarr-01-a .......................... Passed 0.31 sec 45/436 Test #49: rectarr-04 ............................ Passed 0.20 sec Start 87: drr-b Start 90: drr-c 46/436 Test #62: vf-radial-1 ........................... Passed 0.30 sec 47/436 Test #16: lung-2 ................................ Passed 1.68 sec Start 93: fdk-cpu-a Start 96: fdk-cpu-d 48/436 Test #90: drr-c ................................. Passed 0.40 sec 49/436 Test #87: drr-b ................................. Passed 0.43 sec Start 99: landmark-warp-a Start 104: landmark-warp-b 50/436 Test #99: landmark-warp-a ....................... Passed 0.52 sec 51/436 Test #104: landmark-warp-b ....................... Passed 0.51 sec Start 109: landmark-warp-c Start 115: plm-add-a 52/436 Test #109: landmark-warp-c ....................... Passed 0.53 sec 53/436 Test #115: plm-add-a ............................. Passed 0.52 sec Start 118: plm-add-b Start 121: plm-add-vf-a 54/436 Test #118: plm-add-b ............................. Passed 0.52 sec 55/436 Test #121: plm-add-vf-a .......................... Passed 0.51 sec Start 124: plm-add-vf-b Start 127: plm-boundary-a 56/436 Test #127: plm-boundary-a ........................ Passed 0.26 sec Start 134: plm-convert-dicom-c 57/436 Test #124: plm-add-vf-b .......................... Passed 0.51 sec Start 140: plm-convert-dicom-donut-a 58/436 Test #140: plm-convert-dicom-donut-a ............. Passed 0.54 sec 59/436 Test #134: plm-convert-dicom-c ................... Passed 0.92 sec Start 143: plm-convert-dicom-donut-b Start 147: plm-convert-cxt 60/436 Test #143: plm-convert-dicom-donut-b ............. Passed 0.53 sec 61/436 Test #147: plm-convert-cxt ....................... Passed 0.52 sec 62/436 Test #93: fdk-cpu-a ............................. Passed 4.23 sec Start 151: plm-convert-dose-scale Start 169: plm-fill-a Start 172: plm-mask-a 63/436 Test #151: plm-convert-dose-scale ................ Passed 0.22 sec 64/436 Test #169: plm-fill-a ............................ Passed 0.22 sec Start 175: plm-gamma-a Start 178: plm-gamma-b 65/436 Test #172: plm-mask-a ............................ Passed 0.43 sec Start 185: plm-maximum-a 66/436 Test #178: plm-gamma-b ........................... Passed 0.33 sec 67/436 Test #185: plm-maximum-a ......................... Passed 0.29 sec Start 188: plm-multiply-a Start 191: plm-multiply-vf-a 68/436 Test #175: plm-gamma-a ........................... Passed 0.81 sec 69/436 Test #188: plm-multiply-a ........................ Passed 0.26 sec Start 195: plm-reg-align-center Start 201: plm-reg-itk-rigid-a 70/436 Test #191: plm-multiply-vf-a ..................... Passed 0.38 sec 71/436 Test #195: plm-reg-align-center .................. Passed 0.22 sec Start 206: plm-reg-itk-similarity Start 211: plm-reg-itk-bspline 72/436 Test #201: plm-reg-itk-rigid-a ................... Passed 0.57 sec Start 214: plm-reg-itk-demons 73/436 Test #206: plm-reg-itk-similarity ................ Passed 0.76 sec Start 224: plm-bsp-mse-c 74/436 Test #214: plm-reg-itk-demons .................... Passed 1.42 sec Start 227: plm-bsp-mse-h 75/436 Test #224: plm-bsp-mse-c ......................... Passed 0.73 sec Start 230: plm-bsp-mse-k 76/436 Test #227: plm-bsp-mse-h ......................... Passed 0.63 sec Start 233: plm-bsp-mse-l 77/436 Test #230: plm-bsp-mse-k ......................... Passed 0.73 sec 78/436 Test #233: plm-bsp-mse-l ......................... Passed 0.61 sec Start 236: plm-bsp-mi-c Start 239: plm-bsp-mi-k 79/436 Test #239: plm-bsp-mi-k .......................... Passed 0.72 sec Start 242: plm-bsp-gm-k 80/436 Test #236: plm-bsp-mi-c .......................... Passed 0.94 sec Start 247: plm-bsp-openmp 81/436 Test #211: plm-reg-itk-bspline ................... Passed 4.17 sec 82/436 Test #242: plm-bsp-gm-k .......................... Passed 0.54 sec Start 254: plm-bsp-ushort Start 257: plm-bsp-double 83/436 Test #247: plm-bsp-openmp ........................ Passed 0.48 sec Start 261: plm-bsp-char-output 84/436 Test #257: plm-bsp-double ........................ Passed 0.38 sec 85/436 Test #254: plm-bsp-ushort ........................ Passed 0.61 sec Start 265: plm-bsp-regularize-none Start 268: plm-bsp-regularize-analytic 86/436 Test #261: plm-bsp-char-output ................... Passed 0.40 sec Start 271: plm-bsp-regularize-numeric 87/436 Test #265: plm-bsp-regularize-none ............... Passed 0.72 sec Start 275: plm-bsp-landmark-b 88/436 Test #268: plm-bsp-regularize-analytic ........... Passed 1.32 sec 89/436 Test #275: plm-bsp-landmark-b .................... Passed 0.61 sec Start 278: plm-bsp-landmark-c Start 281: plm-bsp-landmark-d 90/436 Test #281: plm-bsp-landmark-d .................... Passed 0.35 sec Start 284: plm-bsp-landmark-e 91/436 Test #278: plm-bsp-landmark-c .................... Passed 0.57 sec Start 287: plm-bsp-dcos-a 92/436 Test #284: plm-bsp-landmark-e .................... Passed 0.62 sec Start 290: plm-bsp-dcos-b 93/436 Test #287: plm-bsp-dcos-a ........................ Passed 0.51 sec Start 293: plm-bsp-dcos-c 94/436 Test #290: plm-bsp-dcos-b ........................ Passed 0.61 sec Start 296: plm-bsp-dcos-d 95/436 Test #293: plm-bsp-dcos-c ........................ Passed 0.51 sec Start 299: plm-bsp-dcos-e 96/436 Test #296: plm-bsp-dcos-d ........................ Passed 0.61 sec Start 302: plm-bsp-dcos-f 97/436 Test #299: plm-bsp-dcos-e ........................ Passed 0.51 sec Start 305: plm-reg-multi-a 98/436 Test #302: plm-bsp-dcos-f ........................ Passed 0.61 sec Start 308: plm-reg-multi-b 99/436 Test #271: plm-bsp-regularize-numeric ............ Passed 3.92 sec 100/436 Test #305: plm-reg-multi-a ....................... Passed 0.42 sec Start 311: plm-reg-dv-itk-translation Start 320: plm-reg-process-a 101/436 Test #320: plm-reg-process-a ..................... Passed 0.31 sec Start 323: plm-reg-trans-a 102/436 Test #311: plm-reg-dv-itk-translation ............ Passed 0.42 sec Start 326: plm-reg-trans-b 103/436 Test #308: plm-reg-multi-b ....................... Passed 1.46 sec Start 329: plm-reg-trans-mi-a 104/436 Test #96: fdk-cpu-d ............................. Passed 18.18 sec 105/436 Test #323: plm-reg-trans-a ....................... Passed 3.23 sec Start 332: plm-reg-autores-a Start 335: plm-reg-autores-b 106/436 Test #332: plm-reg-autores-a ..................... Passed 0.51 sec 107/436 Test #326: plm-reg-trans-b ....................... Passed 3.43 sec Start 339: plm-compose-a Start 343: plm-compose-b 108/436 Test #335: plm-reg-autores-b ..................... Passed 0.62 sec Start 347: plm-compose-c 109/436 Test #339: plm-compose-a ......................... Passed 0.31 sec 110/436 Test #343: plm-compose-b ......................... Passed 0.31 sec Start 351: plm-resample-a Start 354: plm-resample-b 111/436 Test #351: plm-resample-a ........................ Passed 0.42 sec 112/436 Test #354: plm-resample-b ........................ Passed 0.41 sec 113/436 Test #347: plm-compose-c ......................... Passed 0.62 sec Start 357: plm-resample-c Start 360: plm-scale-a Start 363: plm-scale-vf-a 114/436 Test #363: plm-scale-vf-a ........................ Passed 0.28 sec Start 369: plm-thumbnail-a 115/436 Test #357: plm-resample-c ........................ Passed 0.39 sec 116/436 Test #360: plm-scale-a ........................... Passed 0.39 sec Start 372: plm-thumbnail-b Start 375: plm-thumbnail-c 117/436 Test #375: plm-thumbnail-c ....................... Passed 0.20 sec 118/436 Test #369: plm-thumbnail-a ....................... Passed 0.41 sec Start 378: plm-union Start 381: plm-threshold-a 119/436 Test #372: plm-thumbnail-b ....................... Passed 0.31 sec 120/436 Test #381: plm-threshold-a ....................... Passed 0.19 sec Start 384: plm-threshold-b Start 387: plm-threshold-c 121/436 Test #378: plm-union ............................. Passed 0.40 sec 122/436 Test #387: plm-threshold-c ....................... Passed 0.20 sec Start 393: plm-warp-a Start 396: plm-warp-b 123/436 Test #384: plm-threshold-b ....................... Passed 0.21 sec Start 401: plm-warp-c 124/436 Test #396: plm-warp-b ............................ Passed 0.51 sec Start 404: plm-warp-d 125/436 Test #393: plm-warp-a ............................ Passed 0.72 sec Start 407: plm-warp-g 126/436 Test #401: plm-warp-c ............................ Passed 0.64 sec 127/436 Test #404: plm-warp-d ............................ Passed 0.43 sec Start 410: plm-warp-h Start 413: plm-warp-i 128/436 Test #407: plm-warp-g ............................ Passed 0.33 sec Start 416: plm-xf-convert-a 129/436 Test #410: plm-warp-h ............................ Passed 0.36 sec 130/436 Test #413: plm-warp-i ............................ Passed 0.45 sec Start 420: plm-xf-convert-d-warp-1 Start 423: plm-xf-convert-d-warp-2 131/436 Test #416: plm-xf-convert-a ...................... Passed 0.35 sec Start 428: vf-invert-zero-1 132/436 Test #420: plm-xf-convert-d-warp-1 ............... Passed 0.31 sec Start 431: vf-invert-trans-1 133/436 Test #428: vf-invert-zero-1 ...................... Passed 0.41 sec 134/436 Test #423: plm-xf-convert-d-warp-2 ............... Passed 0.81 sec Start 29: rect-10 Start 32: rect-11 135/436 Test #29: rect-10 ............................... Passed 0.21 sec 136/436 Test #329: plm-reg-trans-mi-a .................... Passed 7.99 sec 137/436 Test #32: rect-11 ............................... Passed 0.25 sec Start 41: rect-19 Start 43: rectarr-01 Start 44: rectarr-02 138/436 Test #431: vf-invert-trans-1 ..................... Passed 0.48 sec 139/436 Test #41: rect-19 ............................... Passed 0.19 sec 140/436 Test #44: rectarr-02 ............................ Passed 0.21 sec Start 45: rectarr-m-01 Start 46: rectarr-m-02 Start 51: roi-1 141/436 Test #43: rectarr-01 ............................ Passed 0.22 sec 142/436 Test #51: roi-1 ................................. Passed 0.19 sec 143/436 Test #46: rectarr-m-02 .......................... Passed 0.19 sec Start 55: sphere-4 Start 64: vf-zero-stats Start 66: vf-trans-1-stats 144/436 Test #55: sphere-4 .............................. Passed 0.19 sec 145/436 Test #45: rectarr-m-01 .......................... Passed 0.39 sec 146/436 Test #64: vf-zero-stats ......................... Passed 0.28 sec Start 68: vf-trans-2-stats Start 70: vf-radial-1-stats Start 74: bspline-g 147/436 Test #66: vf-trans-1-stats ...................... Passed 0.31 sec Start 76: bspline-h 148/436 Test #70: vf-radial-1-stats ..................... Passed 0.33 sec 149/436 Test #68: vf-trans-2-stats ...................... Passed 0.34 sec 150/436 Test #74: bspline-g ............................. Passed 0.48 sec Start 80: bspline-mi-c-2 Start 82: demons-a Start 85: drr-a-stats 151/436 Test #85: drr-a-stats ........................... Passed 0.19 sec Start 88: drr-b-stats 152/436 Test #88: drr-b-stats ........................... Passed 0.18 sec Start 91: drr-c-stats 153/436 Test #91: drr-c-stats ........................... Passed 0.18 sec 154/436 Test #76: bspline-h ............................. Passed 1.12 sec Start 94: fdk-cpu-a-stats Start 97: fdk-cpu-d-stats 155/436 Test #82: demons-a .............................. Passed 1.48 sec 156/436 Test #94: fdk-cpu-a-stats ....................... Passed 0.56 sec Start 100: landmark-warp-a-stats-1 Start 102: landmark-warp-a-stats-2 157/436 Test #97: fdk-cpu-d-stats ....................... Passed 0.67 sec Start 105: landmark-warp-b-stats-1 158/436 Test #102: landmark-warp-a-stats-2 ............... Passed 0.41 sec 159/436 Test #100: landmark-warp-a-stats-1 ............... Passed 0.41 sec 160/436 Test #80: bspline-mi-c-2 ........................ Passed 2.18 sec Start 107: landmark-warp-b-stats-2 Start 110: landmark-warp-c-stats-1 Start 112: landmark-warp-c-stats-2 161/436 Test #105: landmark-warp-b-stats-1 ............... Passed 0.35 sec 162/436 Test #107: landmark-warp-b-stats-2 ............... Passed 0.29 sec Start 116: plm-add-a-stats Start 119: plm-add-b-stats 163/436 Test #112: landmark-warp-c-stats-2 ............... Passed 0.29 sec 164/436 Test #110: landmark-warp-c-stats-1 ............... Passed 0.29 sec Start 122: plm-add-vf-a-stats Start 125: plm-add-vf-b-stats 165/436 Test #116: plm-add-a-stats ....................... Passed 0.42 sec 166/436 Test #119: plm-add-b-stats ....................... Passed 0.41 sec Start 128: plm-boundary-a-stats Start 131: plm-convert-dicom-a-stats 167/436 Test #122: plm-add-vf-a-stats .................... Passed 0.30 sec 168/436 Test #125: plm-add-vf-b-stats .................... Passed 0.31 sec Start 135: plm-convert-dicom-c-stats Start 141: plm-convert-dicom-donut-a-stats 169/436 Test #128: plm-boundary-a-stats .................. Passed 0.51 sec 170/436 Test #131: plm-convert-dicom-a-stats ............. Passed 0.51 sec Start 144: plm-convert-dicom-donut-b-stats Start 148: plm-convert-cxt-stats 171/436 Test #141: plm-convert-dicom-donut-a-stats ....... Passed 0.33 sec Start 152: plm-convert-dose-scale-stats 172/436 Test #135: plm-convert-dicom-c-stats ............. Passed 0.53 sec 173/436 Test #144: plm-convert-dicom-donut-b-stats ....... Passed 0.42 sec 174/436 Test #148: plm-convert-cxt-stats ................. Passed 0.42 sec Start 154: plm-dice-a Start 156: plm-dice-b Start 158: plm-dice-c 175/436 Test #154: plm-dice-a ............................ Passed 0.21 sec 176/436 Test #156: plm-dice-b ............................ Passed 0.21 sec Start 163: plm-dvh-a Start 166: plm-dvh-b 177/436 Test #152: plm-convert-dose-scale-stats .......... Passed 0.33 sec 178/436 Test #158: plm-dice-c ............................ Passed 0.25 sec 179/436 Test #163: plm-dvh-a ............................. Passed 0.20 sec Start 170: plm-fill-a-stats Start 173: plm-mask-a-stats Start 176: plm-gamma-a-stats 180/436 Test #176: plm-gamma-a-stats ..................... Passed 0.27 sec 181/436 Test #166: plm-dvh-b ............................. Passed 0.48 sec Start 179: plm-gamma-b-stats Start 181: plm-gamma-c 182/436 Test #173: plm-mask-a-stats ...................... Passed 0.28 sec 183/436 Test #170: plm-fill-a-stats ...................... Passed 0.28 sec Start 183: plm-gamma-d Start 186: plm-maximum-a-stats 184/436 Test #179: plm-gamma-b-stats ..................... Passed 0.42 sec 185/436 Test #186: plm-maximum-a-stats ................... Passed 0.28 sec Start 189: plm-multiply-a-stats Start 192: plm-multiply-vf-a-stats 186/436 Test #183: plm-gamma-d ........................... Passed 0.44 sec 187/436 Test #181: plm-gamma-c ........................... Passed 0.65 sec Start 196: plm-reg-align-center-stats Start 199: plm-reg-itk-translation-stats 188/436 Test #192: plm-multiply-vf-a-stats ............... Passed 0.28 sec 189/436 Test #189: plm-multiply-a-stats .................. Passed 0.38 sec Start 202: plm-reg-itk-rigid-a-stats-1 Start 204: plm-reg-itk-rigid-a-stats-2 190/436 Test #196: plm-reg-align-center-stats ............ Passed 0.32 sec 191/436 Test #199: plm-reg-itk-translation-stats ......... Passed 0.42 sec 192/436 Test #202: plm-reg-itk-rigid-a-stats-1 ........... Passed 0.26 sec Start 207: plm-reg-itk-similarity-stats-1 Start 209: plm-reg-itk-similarity-stats-2 Start 212: plm-reg-itk-bspline-stats-1 193/436 Test #204: plm-reg-itk-rigid-a-stats-2 ........... Passed 0.38 sec 194/436 Test #212: plm-reg-itk-bspline-stats-1 ........... Passed 0.27 sec Start 216: plm-reg-itk-demons-stats-2 Start 218: plm-reg-itk-demons-diff 195/436 Test #209: plm-reg-itk-similarity-stats-2 ........ Passed 0.28 sec 196/436 Test #207: plm-reg-itk-similarity-stats-1 ........ Passed 0.48 sec Start 220: plm-reg-itk-demons-logd Start 222: plm-reg-itk-demons-sym-logd 197/436 Test #216: plm-reg-itk-demons-stats-2 ............ Passed 0.42 sec Start 225: plm-bsp-mse-c-stats 198/436 Test #225: plm-bsp-mse-c-stats ................... Passed 0.61 sec Start 228: plm-bsp-mse-h-stats 199/436 Test #218: plm-reg-itk-demons-diff ............... Passed 1.53 sec Start 231: plm-bsp-mse-k-stats 200/436 Test #220: plm-reg-itk-demons-logd ............... Passed 1.33 sec 201/436 Test #228: plm-bsp-mse-h-stats ................... Passed 0.41 sec Start 234: plm-bsp-mse-l-stats Start 237: plm-bsp-mi-c-stats 202/436 Test #234: plm-bsp-mse-l-stats ................... Passed 0.27 sec 203/436 Test #231: plm-bsp-mse-k-stats ................... Passed 0.48 sec Start 240: plm-bsp-mi-k-stats Start 243: plm-bsp-gm-k-stats 204/436 Test #222: plm-reg-itk-demons-sym-logd ........... Passed 1.81 sec 205/436 Test #237: plm-bsp-mi-c-stats .................... Passed 0.27 sec Start 245: plm-bsp-sm-multi-a Start 248: plm-bsp-openmp-stats 206/436 Test #243: plm-bsp-gm-k-stats .................... Passed 0.41 sec 207/436 Test #240: plm-bsp-mi-k-stats .................... Passed 0.42 sec Start 250: plm-bsp-resume Start 252: plm-bsp-logfile 208/436 Test #248: plm-bsp-openmp-stats .................. Passed 0.27 sec 209/436 Test #245: plm-bsp-sm-multi-a .................... Passed 0.44 sec Start 255: plm-bsp-ushort-stats Start 258: plm-bsp-double-stats 210/436 Test #252: plm-bsp-logfile ....................... Passed 0.43 sec 211/436 Test #250: plm-bsp-resume ........................ Passed 0.54 sec Start 262: plm-bsp-char-output-stats Start 264: plm-bsp-rect 212/436 Test #258: plm-bsp-double-stats .................. Passed 0.27 sec 213/436 Test #255: plm-bsp-ushort-stats .................. Passed 0.27 sec Start 266: plm-bsp-regularize-none-stats Start 269: plm-bsp-regularize-analytic-stats 214/436 Test #264: plm-bsp-rect .......................... Passed 0.37 sec 215/436 Test #262: plm-bsp-char-output-stats ............. Passed 0.48 sec Start 272: plm-bsp-regularize-numeric-stats Start 276: plm-bsp-landmark-b-stats 216/436 Test #269: plm-bsp-regularize-analytic-stats ..... Passed 0.30 sec 217/436 Test #266: plm-bsp-regularize-none-stats ......... Passed 0.41 sec 218/436 Test #276: plm-bsp-landmark-b-stats .............. Passed 0.28 sec Start 279: plm-bsp-landmark-c-stats Start 282: plm-bsp-landmark-d-stats Start 285: plm-bsp-landmark-e-stats 219/436 Test #272: plm-bsp-regularize-numeric-stats ...... Passed 0.51 sec 220/436 Test #285: plm-bsp-landmark-e-stats .............. Passed 0.30 sec Start 288: plm-bsp-dcos-a-stats Start 291: plm-bsp-dcos-b-stats 221/436 Test #282: plm-bsp-landmark-d-stats .............. Passed 0.31 sec 222/436 Test #279: plm-bsp-landmark-c-stats .............. Passed 0.32 sec Start 294: plm-bsp-dcos-c-stats Start 297: plm-bsp-dcos-d-stats 223/436 Test #291: plm-bsp-dcos-b-stats .................. Passed 0.32 sec 224/436 Test #288: plm-bsp-dcos-a-stats .................. Passed 0.33 sec Start 300: plm-bsp-dcos-e-stats Start 303: plm-bsp-dcos-f-stats 225/436 Test #297: plm-bsp-dcos-d-stats .................. Passed 0.28 sec 226/436 Test #294: plm-bsp-dcos-c-stats .................. Passed 0.38 sec Start 306: plm-reg-multi-a-stats Start 309: plm-reg-multi-b-stats 227/436 Test #303: plm-bsp-dcos-f-stats .................. Passed 0.47 sec 228/436 Test #300: plm-bsp-dcos-e-stats .................. Passed 0.47 sec Start 312: plm-reg-dv-itk-translation-stats Start 321: plm-reg-process-a-stats 229/436 Test #309: plm-reg-multi-b-stats ................. Passed 0.28 sec 230/436 Test #306: plm-reg-multi-a-stats ................. Passed 0.29 sec Start 324: plm-reg-trans-a-stats Start 327: plm-reg-trans-b-stats 231/436 Test #312: plm-reg-dv-itk-translation-stats ...... Passed 0.39 sec 232/436 Test #321: plm-reg-process-a-stats ............... Passed 0.39 sec Start 330: plm-reg-trans-mi-a-stats Start 333: plm-reg-autores-a-stats 233/436 Test #324: plm-reg-trans-a-stats ................. Passed 0.26 sec 234/436 Test #327: plm-reg-trans-b-stats ................. Passed 0.46 sec Start 336: plm-reg-autores-b-stats Start 341: plm-compose-a-stats 235/436 Test #333: plm-reg-autores-a-stats ............... Passed 0.35 sec 236/436 Test #330: plm-reg-trans-mi-a-stats .............. Passed 0.36 sec Start 345: plm-compose-b-stats Start 349: plm-compose-c-stats 237/436 Test #336: plm-reg-autores-b-stats ............... Passed 0.28 sec 238/436 Test #341: plm-compose-a-stats ................... Passed 0.47 sec Start 352: plm-resample-a-stats Start 355: plm-resample-b-stats 239/436 Test #349: plm-compose-c-stats ................... Passed 0.28 sec 240/436 Test #345: plm-compose-b-stats ................... Passed 0.29 sec Start 358: plm-resample-c-stats Start 361: plm-scale-a-stats 241/436 Test #352: plm-resample-a-stats .................. Passed 0.44 sec 242/436 Test #355: plm-resample-b-stats .................. Passed 0.43 sec Start 364: plm-scale-vf-a-stats Start 366: plm-sift-a 243/436 Test #358: plm-resample-c-stats .................. Passed 0.30 sec 244/436 Test #361: plm-scale-a-stats ..................... Passed 0.30 sec Start 370: plm-thumbnail-a-stats Start 373: plm-thumbnail-b-stats 245/436 Test #364: plm-scale-vf-a-stats .................. Passed 0.39 sec 246/436 Test #373: plm-thumbnail-b-stats ................. Passed 0.26 sec Start 376: plm-thumbnail-c-stats Start 379: plm-union-stats 247/436 Test #370: plm-thumbnail-a-stats ................. Passed 0.37 sec Start 382: plm-threshold-a-stats 248/436 Test #376: plm-thumbnail-c-stats ................. Passed 0.31 sec 249/436 Test #379: plm-union-stats ....................... Passed 0.41 sec Start 385: plm-threshold-b-stats Start 388: plm-threshold-c-stats 250/436 Test #382: plm-threshold-a-stats ................. Passed 0.33 sec Start 394: plm-warp-a-stats 251/436 Test #385: plm-threshold-b-stats ................. Passed 0.33 sec 252/436 Test #388: plm-threshold-c-stats ................. Passed 0.32 sec Start 397: plm-warp-b-stats-1 Start 399: plm-warp-b-stats-2 253/436 Test #394: plm-warp-a-stats ...................... Passed 0.44 sec Start 402: plm-warp-c-stats 254/436 Test #399: plm-warp-b-stats-2 .................... Passed 0.36 sec 255/436 Test #397: plm-warp-b-stats-1 .................... Passed 0.38 sec Start 405: plm-warp-d-stats Start 408: plm-warp-g-stats-1 256/436 Test #402: plm-warp-c-stats ...................... Passed 0.56 sec Start 411: plm-warp-h-stats-1 257/436 Test #405: plm-warp-d-stats ...................... Passed 0.32 sec 258/436 Test #408: plm-warp-g-stats-1 .................... Passed 0.32 sec Start 414: plm-warp-i-stats-1 Start 417: plm-xf-convert-b 259/436 Test #411: plm-warp-h-stats-1 .................... Passed 0.54 sec Start 421: plm-xf-convert-d-warp-1-stats 260/436 Test #417: plm-xf-convert-b ...................... Passed 0.31 sec 261/436 Test #414: plm-warp-i-stats-1 .................... Passed 0.34 sec Start 424: plm-xf-convert-d-warp-2-stats Start 429: vf-invert-zero-1-stats 262/436 Test #421: plm-xf-convert-d-warp-1-stats ......... Passed 0.41 sec 263/436 Test #429: vf-invert-zero-1-stats ................ Passed 0.29 sec Start 432: vf-invert-trans-1-stats Start 434: wed-a 264/436 Test #424: plm-xf-convert-d-warp-2-stats ......... Passed 0.31 sec Start 3: gabor-01 265/436 Test #432: vf-invert-trans-1-stats ............... Passed 0.53 sec Start 10: gauss-7 266/436 Test #3: gabor-01 .............................. Passed 0.32 sec Start 17: ptv-1 267/436 Test #10: gauss-7 ............................... Passed 0.53 sec Start 18: ptv-2 268/436 Test #17: ptv-1 ................................. Passed 0.31 sec Start 25: rect-6 269/436 Test #18: ptv-2 ................................. Passed 0.51 sec Start 26: rect-7 270/436 Test #25: rect-6 ................................ Passed 0.41 sec Start 31: rect-10-roi-2 271/436 Test #26: rect-7 ................................ Passed 0.31 sec 272/436 Test #31: rect-10-roi-2 ......................... Passed 0.19 sec Start 39: rect-17 Start 40: rect-18 273/436 Test #39: rect-17 ............................... Passed 0.23 sec Start 50: rgc-1 274/436 Test #40: rect-18 ............................... Passed 0.33 sec 275/436 Test #50: rgc-1 ................................. Passed 0.18 sec Start 56: xramp-1 Start 57: yramp-1 276/436 Test #56: xramp-1 ............................... Passed 0.22 sec Start 58: zramp-1 277/436 Test #57: yramp-1 ............................... Passed 0.32 sec Start 63: vf-gaussian-1 278/436 Test #58: zramp-1 ............................... Passed 0.51 sec Start 65: vf-zero-check 279/436 Test #63: vf-gaussian-1 ......................... Passed 0.31 sec 280/436 Test #65: vf-zero-check ......................... Passed 0.10 sec Start 67: vf-trans-1-check Start 69: vf-trans-2-check 281/436 Test #69: vf-trans-2-check ...................... Passed 0.05 sec 282/436 Test #67: vf-trans-1-check ...................... Passed 0.15 sec Start 71: vf-radial-1-check Start 73: bspline-c-check 283/436 Test #73: bspline-c-check ....................... Passed 0.04 sec 284/436 Test #71: vf-radial-1-check ..................... Passed 0.14 sec Start 75: bspline-g-check Start 77: bspline-h-check 285/436 Test #77: bspline-h-check ....................... Passed 0.04 sec 286/436 Test #75: bspline-g-check ....................... Passed 0.04 sec Start 79: bspline-mi-c-1-check Start 81: bspline-mi-c-2-check 287/436 Test #81: bspline-mi-c-2-check .................. Passed 0.04 sec 288/436 Test #79: bspline-mi-c-1-check .................. Passed 0.04 sec Start 83: demons-a-check Start 86: drr-a-check 289/436 Test #83: demons-a-check ........................ Passed 0.07 sec 290/436 Test #86: drr-a-check ........................... Passed 0.08 sec Start 89: drr-b-check Start 92: drr-c-check 291/436 Test #89: drr-b-check ........................... Passed 0.21 sec 292/436 Test #92: drr-c-check ........................... Passed 0.20 sec Start 95: fdk-cpu-a-check Start 98: fdk-cpu-d-check 293/436 Test #95: fdk-cpu-a-check ....................... Passed 0.22 sec 294/436 Test #98: fdk-cpu-d-check ....................... Passed 0.21 sec Start 101: landmark-warp-a-check-1 Start 103: landmark-warp-a-check-2 295/436 Test #103: landmark-warp-a-check-2 ............... Passed 0.05 sec 296/436 Test #101: landmark-warp-a-check-1 ............... Passed 0.25 sec Start 106: landmark-warp-b-check-1 Start 108: landmark-warp-b-check-2 297/436 Test #106: landmark-warp-b-check-1 ............... Passed 0.04 sec 298/436 Test #108: landmark-warp-b-check-2 ............... Passed 0.23 sec Start 111: landmark-warp-c-check-1 Start 113: landmark-warp-c-check-2 299/436 Test #111: landmark-warp-c-check-1 ............... Passed 0.03 sec 300/436 Test #113: landmark-warp-c-check-2 ............... Passed 0.03 sec Start 114: landmark-warp-d Start 117: plm-add-a-check 301/436 Test #117: plm-add-a-check ....................... Passed 0.05 sec 302/436 Test #114: landmark-warp-d ....................... Passed 0.25 sec Start 120: plm-add-b-check Start 123: plm-add-vf-a-check 303/436 Test #120: plm-add-b-check ....................... Passed 0.03 sec 304/436 Test #123: plm-add-vf-a-check .................... Passed 0.03 sec Start 126: plm-add-vf-b-check Start 129: plm-boundary-a-check 305/436 Test #126: plm-add-vf-b-check .................... Passed 0.03 sec 306/436 Test #129: plm-boundary-a-check .................. Passed 0.05 sec Start 132: plm-convert-dicom-a-check Start 133: plm-convert-dicom-b 307/436 Test #132: plm-convert-dicom-a-check ............. Passed 0.12 sec Start 136: plm-convert-dicom-c-check 308/436 Test #133: plm-convert-dicom-b ................... Passed 0.36 sec 309/436 Test #136: plm-convert-dicom-c-check ............. Passed 0.05 sec 310/436 Test #434: wed-a ................................. Passed 7.87 sec Start 137: plm-convert-dicom-d Start 138: plm-convert-dicom-e Start 139: plm-convert-dicom-f 311/436 Test #137: plm-convert-dicom-d ................... Passed 0.31 sec Start 142: plm-convert-dicom-donut-a-check 312/436 Test #139: plm-convert-dicom-f ................... Passed 0.31 sec 313/436 Test #138: plm-convert-dicom-e ................... Passed 0.31 sec 314/436 Test #142: plm-convert-dicom-donut-a-check ....... Passed 0.10 sec Start 145: plm-convert-dicom-donut-b-check Start 146: plm-convert-dicom-donut-c Start 149: plm-convert-cxt-check 315/436 Test #149: plm-convert-cxt-check ................. Passed 0.05 sec 316/436 Test #145: plm-convert-dicom-donut-b-check ....... Passed 0.06 sec Start 150: plm-convert-prefix-fcsv Start 153: plm-convert-dose-scale-check 317/436 Test #153: plm-convert-dose-scale-check .......... Passed 0.12 sec Start 155: plm-dice-a-check-1 318/436 Test #146: plm-convert-dicom-donut-c ............. Passed 0.58 sec 319/436 Test #155: plm-dice-a-check-1 .................... Passed 0.04 sec Start 157: plm-dice-b-check-1 Start 159: plm-dice-c-check-1 320/436 Test #157: plm-dice-b-check-1 .................... Passed 0.03 sec 321/436 Test #159: plm-dice-c-check-1 .................... Passed 0.03 sec 322/436 Test #150: plm-convert-prefix-fcsv ............... Passed 0.70 sec Start 160: plm-dice-c-check-2 Start 161: plm-dmap-a Start 162: plm-dmap-b 323/436 Test #160: plm-dice-c-check-2 .................... Passed 0.03 sec 324/436 Test #162: plm-dmap-b ............................ Passed 0.24 sec Start 164: plm-dvh-a-check-1 Start 165: plm-dvh-a-check-2 325/436 Test #161: plm-dmap-a ............................ Passed 0.25 sec 326/436 Test #165: plm-dvh-a-check-2 ..................... Passed 0.10 sec 327/436 Test #164: plm-dvh-a-check-1 ..................... Passed 0.11 sec Start 167: plm-dvh-b-check-1 Start 168: plm-dvh-b-check-2 Start 171: plm-fill-a-check 328/436 Test #171: plm-fill-a-check ...................... Passed 0.13 sec 329/436 Test #167: plm-dvh-b-check-1 ..................... Passed 0.14 sec 330/436 Test #168: plm-dvh-b-check-2 ..................... Passed 0.14 sec Start 174: plm-mask-a-check Start 177: plm-gamma-a-check Start 180: plm-gamma-b-check 331/436 Test #174: plm-mask-a-check ...................... Passed 0.14 sec 332/436 Test #177: plm-gamma-a-check ..................... Passed 0.12 sec 333/436 Test #180: plm-gamma-b-check ..................... Passed 0.10 sec Start 182: plm-gamma-c-check Start 184: plm-gamma-d-check Start 187: plm-maximum-a-check 334/436 Test #184: plm-gamma-d-check ..................... Passed 0.12 sec 335/436 Test #187: plm-maximum-a-check ................... Passed 0.10 sec 336/436 Test #182: plm-gamma-c-check ..................... Passed 0.12 sec Start 190: plm-multiply-a-check Start 193: plm-multiply-vf-a-check Start 194: plm-usage 337/436 Test #193: plm-multiply-vf-a-check ............... Passed 0.11 sec 338/436 Test #190: plm-multiply-a-check .................. Passed 0.11 sec 339/436 Test #194: plm-usage ............................. Passed 0.17 sec Start 197: plm-reg-align-center-check Start 200: plm-reg-itk-translation-check Start 203: plm-reg-itk-rigid-a-check-1 340/436 Test #203: plm-reg-itk-rigid-a-check-1 ........... Passed 0.04 sec 341/436 Test #197: plm-reg-align-center-check ............ Passed 0.15 sec 342/436 Test #200: plm-reg-itk-translation-check ......... Passed 0.14 sec Start 205: plm-reg-itk-rigid-a-check-2 Start 208: plm-reg-itk-similarity-check-1 Start 210: plm-reg-itk-similarity-check-2 343/436 Test #210: plm-reg-itk-similarity-check-2 ........ Passed 0.03 sec 344/436 Test #205: plm-reg-itk-rigid-a-check-2 ........... Passed 0.13 sec 345/436 Test #208: plm-reg-itk-similarity-check-1 ........ Passed 0.13 sec Start 213: plm-reg-itk-bspline-check-1 Start 215: plm-reg-itk-demons-check-1 Start 217: plm-reg-itk-demons-check-2 346/436 Test #213: plm-reg-itk-bspline-check-1 ........... Passed 0.03 sec 347/436 Test #217: plm-reg-itk-demons-check-2 ............ Passed 0.04 sec 348/436 Test #215: plm-reg-itk-demons-check-1 ............ Passed 0.14 sec Start 219: plm-reg-itk-demons-diff-check-1 Start 221: plm-reg-itk-demons-logd-check-1 Start 223: plm-reg-itk-demons-sym-logd-check-1 349/436 Test #223: plm-reg-itk-demons-sym-logd-check-1 ... Passed 0.11 sec 350/436 Test #221: plm-reg-itk-demons-logd-check-1 ....... Passed 0.12 sec 351/436 Test #219: plm-reg-itk-demons-diff-check-1 ....... Passed 0.12 sec Start 226: plm-bsp-mse-c-check Start 229: plm-bsp-mse-h-check Start 232: plm-bsp-mse-k-check 352/436 Test #232: plm-bsp-mse-k-check ................... Passed 0.03 sec 353/436 Test #229: plm-bsp-mse-h-check ................... Passed 0.14 sec 354/436 Test #226: plm-bsp-mse-c-check ................... Passed 0.14 sec Start 235: plm-bsp-mse-l-check Start 238: plm-bsp-mi-c-check Start 241: plm-bsp-mi-k-check 355/436 Test #241: plm-bsp-mi-k-check .................... Passed 0.10 sec 356/436 Test #238: plm-bsp-mi-c-check .................... Passed 0.11 sec 357/436 Test #235: plm-bsp-mse-l-check ................... Passed 0.11 sec Start 244: plm-bsp-gm-k-check Start 246: plm-bsp-sm-multi-a-stats Start 249: plm-bsp-openmp-check 358/436 Test #244: plm-bsp-gm-k-check .................... Passed 0.03 sec 359/436 Test #249: plm-bsp-openmp-check .................. Passed 0.23 sec Start 251: plm-bsp-resume-stats Start 253: plm-bsp-logfile-check 360/436 Test #253: plm-bsp-logfile-check ................. Passed 0.04 sec 361/436 Test #246: plm-bsp-sm-multi-a-stats .............. Passed 0.37 sec Start 256: plm-bsp-ushort-check Start 259: plm-bsp-double-check 362/436 Test #256: plm-bsp-ushort-check .................. Passed 0.03 sec 363/436 Test #251: plm-bsp-resume-stats .................. Passed 0.38 sec 364/436 Test #259: plm-bsp-double-check .................. Passed 0.13 sec Start 260: plm-bsp-itk-output Start 263: plm-bsp-char-output-check Start 267: plm-bsp-regularize-none-check 365/436 Test #267: plm-bsp-regularize-none-check ......... Passed 0.10 sec 366/436 Test #263: plm-bsp-char-output-check .............***Failed 0.11 sec -- INFILE is /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/Testing/plm-bsp-char-output-stats.stdout.txt -- REGEX is MIN *([-0-9.]*) -- LOWER_THRESH is -128.1 -- UPPER_THRESH is -127.9 -- PARSED VALUE=|MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 54872| -- PARSED_VALUE=|0.000000| CMake Error at /<>/plastimatch-1.6.5+dfsg.1/Testing/PlmCheckInterval.cmake:22 (message): An error Start 270: plm-bsp-regularize-analytic-check Start 273: plm-bsp-regularize-numeric-check 367/436 Test #270: plm-bsp-regularize-analytic-check ..... Passed 0.11 sec 368/436 Test #260: plm-bsp-itk-output .................... Passed 0.32 sec 369/436 Test #273: plm-bsp-regularize-numeric-check ...... Passed 0.10 sec Start 274: plm-bsp-landmark-a Start 277: plm-bsp-landmark-b-check Start 280: plm-bsp-landmark-c-check 370/436 Test #277: plm-bsp-landmark-b-check .............. Passed 0.22 sec 371/436 Test #280: plm-bsp-landmark-c-check .............. Passed 0.22 sec Start 283: plm-bsp-landmark-d-check Start 286: plm-bsp-landmark-e-check 372/436 Test #274: plm-bsp-landmark-a .................... Passed 0.34 sec 373/436 Test #283: plm-bsp-landmark-d-check .............. Passed 0.12 sec 374/436 Test #286: plm-bsp-landmark-e-check .............. Passed 0.11 sec Start 289: plm-bsp-dcos-a-check Start 292: plm-bsp-dcos-b-check Start 295: plm-bsp-dcos-c-check 375/436 Test #295: plm-bsp-dcos-c-check .................. Passed 0.10 sec 376/436 Test #289: plm-bsp-dcos-a-check .................. Passed 0.11 sec 377/436 Test #292: plm-bsp-dcos-b-check .................. Passed 0.11 sec Start 298: plm-bsp-dcos-d-check Start 301: plm-bsp-dcos-e-check Start 304: plm-bsp-dcos-f-check 378/436 Test #301: plm-bsp-dcos-e-check .................. Passed 0.11 sec 379/436 Test #298: plm-bsp-dcos-d-check .................. Passed 0.11 sec 380/436 Test #304: plm-bsp-dcos-f-check .................. Passed 0.10 sec Start 307: plm-reg-multi-a-check Start 310: plm-reg-multi-b-check Start 313: plm-reg-dv-itk-translation-check 381/436 Test #313: plm-reg-dv-itk-translation-check ...... Passed 0.11 sec 382/436 Test #307: plm-reg-multi-a-check ................. Passed 0.12 sec 383/436 Test #310: plm-reg-multi-b-check ................. Passed 0.11 sec Start 314: plm-reg-roi-a Start 315: plm-reg-roi-b Start 316: plm-reg-roi-c 384/436 Test #315: plm-reg-roi-b ......................... Passed 0.29 sec Start 317: plm-reg-roi-d 385/436 Test #316: plm-reg-roi-c ......................... Passed 0.59 sec 386/436 Test #314: plm-reg-roi-a ......................... Passed 0.59 sec Start 318: plm-reg-roi-e Start 319: plm-reg-stiffness-a 387/436 Test #317: plm-reg-roi-d ......................... Passed 0.46 sec Start 322: plm-reg-process-a-check 388/436 Test #318: plm-reg-roi-e ......................... Passed 0.57 sec 389/436 Test #322: plm-reg-process-a-check ............... Passed 0.23 sec Start 325: plm-reg-trans-a-check Start 328: plm-reg-trans-b-check 390/436 Test #319: plm-reg-stiffness-a ................... Passed 0.70 sec 391/436 Test #325: plm-reg-trans-a-check ................. Passed 0.15 sec 392/436 Test #328: plm-reg-trans-b-check ................. Passed 0.15 sec Start 331: plm-reg-trans-mi-a-check Start 334: plm-reg-autores-a-check Start 337: plm-reg-autores-b-check 393/436 Test #337: plm-reg-autores-b-check ............... Passed 0.10 sec 394/436 Test #331: plm-reg-trans-mi-a-check .............. Passed 0.11 sec 395/436 Test #334: plm-reg-autores-a-check ............... Passed 0.11 sec Start 340: plm-compose-a-warp Start 342: plm-compose-a-check Start 344: plm-compose-b-warp 396/436 Test #342: plm-compose-a-check ................... Passed 0.21 sec 397/436 Test #344: plm-compose-b-warp .................... Passed 0.31 sec Start 346: plm-compose-b-check Start 348: plm-compose-c-warp 398/436 Test #346: plm-compose-b-check ................... Passed 0.03 sec 399/436 Test #340: plm-compose-a-warp .................... Passed 0.45 sec Start 350: plm-compose-c-check Start 353: plm-resample-a-check 400/436 Test #353: plm-resample-a-check .................. Passed 0.04 sec 401/436 Test #350: plm-compose-c-check ................... Passed 0.14 sec 402/436 Test #348: plm-compose-c-warp .................... Passed 0.37 sec Start 356: plm-resample-b-check Start 359: plm-resample-c-check Start 362: plm-scale-a-check 403/436 Test #356: plm-resample-b-check .................. Passed 0.11 sec 404/436 Test #359: plm-resample-c-check .................. Passed 0.11 sec 405/436 Test #362: plm-scale-a-check ..................... Passed 0.10 sec Start 365: plm-scale-vf-a-check Start 371: plm-thumbnail-a-check Start 374: plm-thumbnail-b-check 406/436 Test #374: plm-thumbnail-b-check ................. Passed 0.11 sec 407/436 Test #371: plm-thumbnail-a-check ................. Passed 0.12 sec 408/436 Test #365: plm-scale-vf-a-check .................. Passed 0.12 sec Start 377: plm-thumbnail-c-check Start 380: plm-union-check Start 383: plm-threshold-a-check 409/436 Test #380: plm-union-check ....................... Passed 0.11 sec 410/436 Test #377: plm-thumbnail-c-check ................. Passed 0.11 sec 411/436 Test #383: plm-threshold-a-check ................. Passed 0.10 sec Start 386: plm-threshold-b-check Start 389: plm-threshold-c-check Start 390: plm-warp-pointset-a 412/436 Test #390: plm-warp-pointset-a ................... Passed 0.20 sec 413/436 Test #386: plm-threshold-b-check ................. Passed 0.21 sec 414/436 Test #389: plm-threshold-c-check ................. Passed 0.20 sec Start 391: plm-warp-pointset-b Start 392: plm-warp-pointset-c Start 395: plm-warp-a-check 415/436 Test #395: plm-warp-a-check ...................... Passed 0.22 sec 416/436 Test #391: plm-warp-pointset-b ................... Passed 0.22 sec Start 398: plm-warp-b-check-1 Start 400: plm-warp-b-check-2 417/436 Test #392: plm-warp-pointset-c ................... Passed 0.33 sec 418/436 Test #398: plm-warp-b-check-1 .................... Passed 0.11 sec 419/436 Test #400: plm-warp-b-check-2 .................... Passed 0.10 sec Start 403: plm-warp-c-check Start 406: plm-warp-d-check Start 409: plm-warp-g-check-1 420/436 Test #406: plm-warp-d-check ...................... Passed 0.13 sec 421/436 Test #403: plm-warp-c-check ...................... Passed 0.13 sec 422/436 Test #409: plm-warp-g-check-1 .................... Passed 0.12 sec Start 412: plm-warp-h-check-1 Start 415: plm-warp-i-check-1 Start 418: plm-xf-convert-c 423/436 Test #412: plm-warp-h-check-1 .................... Passed 0.14 sec 424/436 Test #418: plm-xf-convert-c ...................... Passed 0.20 sec 425/436 Test #415: plm-warp-i-check-1 .................... Passed 0.22 sec Start 422: plm-xf-convert-d-warp-1-check Start 425: plm-xf-convert-d-warp-2-check Start 426: plm-xf-convert-e 426/436 Test #422: plm-xf-convert-d-warp-1-check ......... Passed 0.11 sec 427/436 Test #425: plm-xf-convert-d-warp-2-check ......... Passed 0.11 sec Start 427: plm-xf-convert-f Start 430: vf-invert-zero-1-check 428/436 Test #430: vf-invert-zero-1-check ................ Passed 0.10 sec 429/436 Test #426: plm-xf-convert-e ...................... Passed 0.41 sec Start 433: vf-invert-trans-1-check Start 435: wed-b 430/436 Test #427: plm-xf-convert-f ...................... Passed 0.39 sec 431/436 Test #433: vf-invert-trans-1-check ............... Passed 0.18 sec Start 436: wed-c 432/436 Test #366: plm-sift-a ............................ Passed 20.29 sec Start 367: plm-sift-a-check-1 Start 368: plm-sift-a-check-2 433/436 Test #367: plm-sift-a-check-1 .................... Passed 0.12 sec 434/436 Test #368: plm-sift-a-check-2 .................... Passed 0.21 sec 435/436 Test #436: wed-c ................................. Passed 1.93 sec 436/436 Test #435: wed-b ................................. Passed 5.49 sec 99% tests passed, 1 tests failed out of 436 Total Test time (real) = 70.23 sec The following tests FAILED: 263 - plm-bsp-char-output-check (Failed) Errors while running CTest Makefile:154: recipe for target 'test' failed make[2]: *** [test] Error 8 make[2]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' dh_auto_test: make -j4 test ARGS\+=-j4 returned exit code 2 make[1]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1' dh_auto_install make -j4 install DESTDIR=/<>/plastimatch-1.6.5\+dfsg.1/debian/plastimatch AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' /usr/bin/cmake -H/<>/plastimatch-1.6.5+dfsg.1 -B/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/CMakeFiles /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/depend make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/depend make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/depend make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/libs/liblbfgs-1.9 /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9 /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/libs/specfun /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/specfun/CMakeFiles/specfun.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/libs/inih-r29 /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/inih-r29 /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/inih-r29/CMakeFiles/inih.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/libs/devillard /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/devillard /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/devillard/CMakeFiles/devillard.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/build make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'libs/specfun/CMakeFiles/specfun.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/build make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'libs/inih-r29/CMakeFiles/inih.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'libs/devillard/CMakeFiles/devillard.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 1%] Built target specfun [ 2%] Built target lbfgs make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/depend make -f src/plastimatch/sys/CMakeFiles/plmsys.dir/build.make src/plastimatch/sys/CMakeFiles/plmsys.dir/depend [ 3%] Built target inih make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/libs/nkidecompress /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/nkidecompress /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/libs/nkidecompress/CMakeFiles/nkidecompress.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/clp /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/clp /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/clp/CMakeFiles/plmclp.dir/DependInfo.cmake --color= cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/sys /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/sys/CMakeFiles/plmsys.dir/DependInfo.cmake --color= [ 4%] Built target devillard make -f src/plastimatch/standalone/CMakeFiles/raw_to_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/raw_to_mha.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/raw_to_mha.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/build make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'libs/nkidecompress/CMakeFiles/nkidecompress.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/clp/CMakeFiles/plmclp.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/sys/CMakeFiles/plmsys.dir/build.make src/plastimatch/sys/CMakeFiles/plmsys.dir/build make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 4%] Built target nkidecompress make -f src/plastimatch/standalone/CMakeFiles/raw_to_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/raw_to_mha.dir/build make -f src/plastimatch/standalone/CMakeFiles/mha_to_raw.dir/build.make src/plastimatch/standalone/CMakeFiles/mha_to_raw.dir/depend [ 4%] Built target plmclp make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/raw_to_mha.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/mha_to_raw.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/sys/CMakeFiles/plmsys.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 4%] Built target raw_to_mha [ 8%] Built target plmsys make -f src/plastimatch/base/CMakeFiles/plmbase.dir/build.make src/plastimatch/base/CMakeFiles/plmbase.dir/depend make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/mha_to_raw.dir/build.make src/plastimatch/standalone/CMakeFiles/mha_to_raw.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/mha_to_raw.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 9%] Built target mha_to_raw make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/base /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/base/CMakeFiles/plmbase.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/base/CMakeFiles/plmbase.dir/build.make src/plastimatch/base/CMakeFiles/plmbase.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/base/CMakeFiles/plmbase.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 43%] Built target plmbase make -f src/plastimatch/util/CMakeFiles/plmutil.dir/build.make src/plastimatch/util/CMakeFiles/plmutil.dir/depend make -f src/plastimatch/dose/CMakeFiles/plmdose.dir/build.make src/plastimatch/dose/CMakeFiles/plmdose.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/dose /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/dose/CMakeFiles/plmdose.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/util /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/util/CMakeFiles/plmutil.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/dose/CMakeFiles/plmdose.dir/build.make src/plastimatch/dose/CMakeFiles/plmdose.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/dose/CMakeFiles/plmdose.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 47%] Built target plmdose make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/util/CMakeFiles/plmutil.dir/build.make src/plastimatch/util/CMakeFiles/plmutil.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/util/CMakeFiles/plmutil.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 56%] Built target plmutil make -f src/plastimatch/register/CMakeFiles/plmregister.dir/build.make src/plastimatch/register/CMakeFiles/plmregister.dir/depend make -f src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/reconstruct /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/reconstruct /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 57%] Built target plmreconstruct make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/register /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/register/CMakeFiles/plmregister.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/register/CMakeFiles/plmregister.dir/build.make src/plastimatch/register/CMakeFiles/plmregister.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/register/CMakeFiles/plmregister.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 71%] Built target plmregister make -f src/plastimatch/segment/CMakeFiles/plmsegment.dir/build.make src/plastimatch/segment/CMakeFiles/plmsegment.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/segment /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/segment/CMakeFiles/plmsegment.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/segment/CMakeFiles/plmsegment.dir/build.make src/plastimatch/segment/CMakeFiles/plmsegment.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/segment/CMakeFiles/plmsegment.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 75%] Built target plmsegment make -f src/plastimatch/cli/CMakeFiles/landmark_warp.dir/build.make src/plastimatch/cli/CMakeFiles/landmark_warp.dir/depend make -f src/plastimatch/cli/CMakeFiles/plastimatch.dir/build.make src/plastimatch/cli/CMakeFiles/plastimatch.dir/depend make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/depend make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli/CMakeFiles/landmark_warp.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/cli/CMakeFiles/landmark_warp.dir/build.make src/plastimatch/cli/CMakeFiles/landmark_warp.dir/build make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/cli /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/cli/CMakeFiles/plastimatch.dir/DependInfo.cmake --color= [ 75%] Built target bragg_curve make -f src/plastimatch/standalone/CMakeFiles/proton_dose.dir/build.make src/plastimatch/standalone/CMakeFiles/proton_dose.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/proton_dose.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/cli/CMakeFiles/landmark_warp.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 76%] Built target dicom_uid make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/proton_dose.dir/build.make src/plastimatch/standalone/CMakeFiles/proton_dose.dir/build [ 76%] Built target landmark_warp make -f src/plastimatch/standalone/CMakeFiles/fdk.dir/build.make src/plastimatch/standalone/CMakeFiles/fdk.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/fdk.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/fdk.dir/build.make src/plastimatch/standalone/CMakeFiles/fdk.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/proton_dose.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/fdk.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 77%] Built target proton_dose make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/cli/CMakeFiles/plastimatch.dir/build.make src/plastimatch/cli/CMakeFiles/plastimatch.dir/build make -f src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build.make src/plastimatch/standalone/CMakeFiles/compute_distance.dir/depend [ 77%] Built target hnd_to_pfm make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/compute_distance.dir/DependInfo.cmake --color= [ 78%] Built target fdk make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/sobp.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build.make src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/build [ 79%] Built target landmark_diff make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/dicom_info.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/sobp.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 80%] Built target compute_distance make -f src/plastimatch/standalone/CMakeFiles/vf_invert.dir/build.make src/plastimatch/standalone/CMakeFiles/vf_invert.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/vf_invert.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build [ 80%] Built target sobp make -f src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build.make src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/cli/CMakeFiles/plastimatch.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/vf_invert.dir/build.make src/plastimatch/standalone/CMakeFiles/vf_invert.dir/build [ 92%] Built target plastimatch make -f src/plastimatch/standalone/CMakeFiles/group_add.dir/build.make src/plastimatch/standalone/CMakeFiles/group_add.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/group_add.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build.make src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build [ 92%] Built target dicom_info make -f src/plastimatch/standalone/CMakeFiles/drr.dir/build.make src/plastimatch/standalone/CMakeFiles/drr.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/vf_invert.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/drr.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 92%] Built target vf_invert make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/group_add.dir/build.make src/plastimatch/standalone/CMakeFiles/group_add.dir/build make -f src/plastimatch/standalone/CMakeFiles/filter.dir/build.make src/plastimatch/standalone/CMakeFiles/filter.dir/depend make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/drr.dir/build.make src/plastimatch/standalone/CMakeFiles/drr.dir/build [ 93%] Built target xvi_archive make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/filter.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/cmd_prompt_launcher.dir/build.make src/plastimatch/standalone/CMakeFiles/cmd_prompt_launcher.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/cmd_prompt_launcher.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/drr.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 94%] Built target drr make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/depend make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/cmd_prompt_launcher.dir/build.make src/plastimatch/standalone/CMakeFiles/cmd_prompt_launcher.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/group_add.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/filter.dir/build.make src/plastimatch/standalone/CMakeFiles/filter.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/cmd_prompt_launcher.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 94%] Built target cmd_prompt_launcher make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/depend [ 95%] Built target group_add make -f src/plastimatch/standalone/CMakeFiles/bspline.dir/build.make src/plastimatch/standalone/CMakeFiles/bspline.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/bspline.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/wed.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/bspline.dir/build.make src/plastimatch/standalone/CMakeFiles/bspline.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/filter.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/build [ 95%] Built target filter make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/bspline.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/check_grad.dir/DependInfo.cmake --color= [ 95%] Built target merge_vfs make -f src/plastimatch/standalone/CMakeFiles/demons.dir/build.make src/plastimatch/standalone/CMakeFiles/demons.dir/depend [ 96%] Built target bspline make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/depend make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/demons.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/wed.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/build [ 97%] Built target wed make -f src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build.make src/plastimatch/standalone/CMakeFiles/dlib_train.dir/depend make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/demons.dir/build.make src/plastimatch/standalone/CMakeFiles/demons.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' cd /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/plastimatch-1.6.5+dfsg.1 /<>/plastimatch-1.6.5+dfsg.1/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/src/plastimatch/standalone/CMakeFiles/dlib_train.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/demons.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make -f src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build.make src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/check_grad.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 98%] Built target demons make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[4]: Nothing to be done for 'src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build'. make[4]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' [ 99%] Built target check_grad [ 99%] Built target dlib_train [100%] Built target shuffle_mha make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RELEASE" -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/share/doc/plastimatch/README.TXT -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/share/doc/plastimatch/COPYRIGHT.TXT -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/liblbfgs.a -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libdevillard.a -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libinih.a -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libspecfun.a -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libnkidecompress.a -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends.cmake -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends-release.cmake -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfig.cmake -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfigVersion.cmake -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libplmbase.so.1.6 -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libplmbase.so -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmbase_config.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/aperture.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/astroid_dose.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_interpolate.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_warp.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform_legacy.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/clamp.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_extract.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_io.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_probe.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_util.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_cosines.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_matrices.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/float_pair_list.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/gaussian.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io_p.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate_macros.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkAndConstantToImageFilter.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkClampCastImageFilter.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_dicom_load.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_dicom_save.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_directions.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_accumulate.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_cast.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_clone.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_create.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_load.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_origin.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_region.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_save.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_scale.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_stats.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_type.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_metadata.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_point.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_pointset.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_resample.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_volume_header.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_warp.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/make_string.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/mc_dose.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/metadata.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/mha_io.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/nki_io.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/parameter_parser.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_file_format.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_p.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_header.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_set.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_type.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_itk.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_uid_prefix.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_warp.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset_warp.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image_dir.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_matrix.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_volume.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/pwlut.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterize_slice.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterizer.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/raw_pointset.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_data.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_callback.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_probe.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_p.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_metadata.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_contour.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_roi.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_beam.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_control_pt.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/segmentation.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_extract.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_list.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_img_extract.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_list_io.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/threading.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/thumbnail.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_convolve.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_jacobian.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_stats.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_conv.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_fill.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_gaussian.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_grad.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_header.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_limit.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_macros.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_resample.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_stats.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_convert.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_legacy.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_point.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct_transform.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_demographic.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dir.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dose.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_patient.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_plan.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_structures.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_studyset.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm_p.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_config.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_file.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_metadata.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_module.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rdd.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtdose.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtss.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtplan.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study_p.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series_map.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_sro.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_uid.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_util.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libplmsys.so.1.6 -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libplmsys.so -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_config.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmsys_config.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/compiler_warnings.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dir_list.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/double_align8.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dlib_threads.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/file_util.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/logfile.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/option_range.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/path_util.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_endian.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_exception.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_fwrite.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_int.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_macros.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_math.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_return_code.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_sleep.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer_p.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_va_copy.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/print_and_exit.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/smart_pointer.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/string_util.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libplmutil.so.1.6 -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libplmutil.so -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmutil_config.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dice_statistics.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dvh.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/gamma_dose_comparison.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/geometry_chooser.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/hausdorff_distance.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_boundary.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_center.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_warp.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/gabor.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/ramp_filter.h -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/bin/plastimatch -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/bin/landmark_warp -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libplmdose.so.1.6 -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libplmdose.so -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libplmreconstruct.so.1.6 -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libplmreconstruct.so -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libplmregister.so.1.6 -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libplmregister.so -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libplmsegment.so.1.6 -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libplmsegment.so -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/bin/drr -- Installing: /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/bin/fdk make[2]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1/obj-arm-linux-gnueabihf' rm -rfv /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/*.a removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libdevillard.a' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libinih.a' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/liblbfgs.a' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libnkidecompress.a' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/libspecfun.a' rm -rfv /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/cmake removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends.cmake' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfig.cmake' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfigVersion.cmake' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends-release.cmake' removed directory '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch' removed directory '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/lib/cmake' rm -rfv /<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dir.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_metadata.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_extract.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterize_slice.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterizer.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_p.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_load.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_origin.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_cosines.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/gaussian.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_itk.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_region.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_warp.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_accumulate.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image_dir.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate_macros.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_probe.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer_p.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_point.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_file_format.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_scale.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_resample.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_list_io.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_data.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/threading.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dose.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_list.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_stats.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct_transform.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_stats.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_extract.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmbase_config.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_clone.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_studyset.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_probe.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_plan.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/option_range.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/float_pair_list.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dice_statistics.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_convert.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtdose.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_roi.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/parameter_parser.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/clamp.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform_legacy.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_int.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_boundary.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_point.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study_p.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_math.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_metadata.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_util.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/string_util.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_exception.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dir_list.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_sro.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_macros.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/compiler_warnings.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/mha_io.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/ramp_filter.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_jacobian.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/hausdorff_distance.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_cast.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/thumbnail.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/gamma_dose_comparison.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_util.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/segmentation.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_module.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_demographic.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/aperture.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_config.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_conv.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io_p.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_stats.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_img_extract.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_warp.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_convolve.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmsys_config.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_p.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_warp.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_grad.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_header.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_gaussian.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_matrix.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_matrices.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series_map.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_interpolate.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset_warp.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_center.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_metadata.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkClampCastImageFilter.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkAndConstantToImageFilter.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_dicom_save.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_limit.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/raw_pointset.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/nki_io.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmutil_config.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/double_align8.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_type.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_file.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/astroid_dose.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_legacy.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_header.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_endian.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_structures.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_warp.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/mc_dose.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_set.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_volume.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm_p.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/geometry_chooser.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_config.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dlib_threads.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_fwrite.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_create.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/print_and_exit.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_pointset.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/make_string.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_io.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_fill.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_resample.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dvh.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_va_copy.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/metadata.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_return_code.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/gabor.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/logfile.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_contour.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtss.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_patient.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/path_util.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_save.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_dicom_load.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_uid_prefix.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_macros.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtplan.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_volume_header.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_uid.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rdd.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/pwlut.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_callback.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/file_util.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_beam.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_type.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/smart_pointer.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_sleep.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_directions.h' removed '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_control_pt.h' removed directory '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include/plastimatch' removed directory '/<>/plastimatch-1.6.5+dfsg.1/debian/plastimatch/usr/include' make[1]: Leaving directory '/<>/plastimatch-1.6.5+dfsg.1' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/plastimatch/usr/lib/libplmregister.so.1.6 found in none of the libraries dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/plastimatch/usr/lib/libplmdose.so.1.6 found in none of the libraries dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/plastimatch/usr/lib/libplmutil.so.1.6 found in none of the libraries dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/plastimatch/usr/lib/libplmbase.so.1.6 found in none of the libraries dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/plastimatch/usr/lib/libplmsys.so.1.6 found in none of the libraries dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/plastimatch/usr/lib/libplmsegment.so.1.6 found in none of the libraries dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 131 INFO: pkgstriptranslations version 131 pkgstriptranslations: processing plastimatch (in debian/plastimatch); do_strip: , oemstrip: pkgstriptranslations: processing plastimatch-dbgsym (in debian/.debhelper/plastimatch/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgmaintainermangler: Not overriding Maintainer for domain lists.ubuntu.com pkgstripfiles: processing control file: debian/plastimatch/DEBIAN/control, package plastimatch, directory debian/plastimatch pkgstripfiles: Truncating usr/share/doc/plastimatch/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package plastimatch ... pkgstripfiles: No PNG files. dpkg-deb: building package 'plastimatch' in '../plastimatch_1.6.5+dfsg.1-1build4_armhf.deb'. pkgstripfiles: processing control file: debian/.debhelper/plastimatch/dbgsym-root/DEBIAN/control, package plastimatch-dbgsym, directory debian/.debhelper/plastimatch/dbgsym-root pkgstripfiles: Running PNG optimization (using 4 cpus) for package plastimatch-dbgsym ... pkgstripfiles: No PNG files. dpkg-deb: building package 'plastimatch-dbgsym' in 'debian/.debhelper/scratch-space/build-plastimatch/plastimatch-dbgsym_1.6.5+dfsg.1-1build4_armhf.deb'. Renaming plastimatch-dbgsym_1.6.5+dfsg.1-1build4_armhf.deb to plastimatch-dbgsym_1.6.5+dfsg.1-1build4_armhf.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../plastimatch_1.6.5+dfsg.1-1build4_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build plastimatch-1.6.5+dfsg.1 dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20170822-2137 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ plastimatch_1.6.5+dfsg.1-1build4_armhf.changes: ----------------------------------------------- Format: 1.8 Date: Tue, 22 Aug 2017 23:09:05 +0200 Source: plastimatch Binary: plastimatch Architecture: armhf Version: 1.6.5+dfsg.1-1build4 Distribution: artful-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Gianfranco Costamagna Description: plastimatch - medical image reconstruction and registration Changes: plastimatch (1.6.5+dfsg.1-1build4) artful; urgency=medium . * Rebuild against new libdcmtk12. Checksums-Sha1: 110235e1c440bf3b0ff15de6e7b76e330148e802 42270164 plastimatch-dbgsym_1.6.5+dfsg.1-1build4_armhf.ddeb c755e828b35a41f80dc8a94ffd528d9138c1bdea 8252 plastimatch_1.6.5+dfsg.1-1build4_armhf.buildinfo 9e0a879a415338ed0671193d6bbd25fd75740c6d 2053282 plastimatch_1.6.5+dfsg.1-1build4_armhf.deb Checksums-Sha256: a2f39f01c8acaf45fe1525ac7f9e02c24a9b38dde1ef9ce21be6981a637897b1 42270164 plastimatch-dbgsym_1.6.5+dfsg.1-1build4_armhf.ddeb a9929ff71b7190a9ac1a3963967bdcd635227af9735b849f582c61b3e83bb79b 8252 plastimatch_1.6.5+dfsg.1-1build4_armhf.buildinfo 6e20335bd71b09094a0eda040d0d60883da27fcd30382dd1ad3f3cd30a7bc148 2053282 plastimatch_1.6.5+dfsg.1-1build4_armhf.deb Files: 1c8a96c93633bcf33addf04267a63711 42270164 debug extra plastimatch-dbgsym_1.6.5+dfsg.1-1build4_armhf.ddeb b83df01119d34bbb1f05e39e11d82a20 8252 science optional plastimatch_1.6.5+dfsg.1-1build4_armhf.buildinfo f6aaef67366a96877c0fe75f7055081a 2053282 science optional plastimatch_1.6.5+dfsg.1-1build4_armhf.deb Original-Maintainer: Debian Med Packaging Team +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ plastimatch_1.6.5+dfsg.1-1build4_armhf.deb ------------------------------------------ new debian package, version 2.0. size 2053282 bytes: control archive=2013 bytes. 2219 bytes, 39 lines control 1270 bytes, 20 lines md5sums 202 bytes, 7 lines shlibs 74 bytes, 2 lines triggers Package: plastimatch Version: 1.6.5+dfsg.1-1build4 Architecture: armhf Maintainer: Ubuntu Developers Installed-Size: 10975 Depends: libblas3 | libblas.so.3, libc6 (>= 2.7), libdcmtk12, libdlib18, libfftw3-double3 (>= 3.3.5), libgcc1 (>= 1:4.0), libgdcm2.8, libgomp1 (>= 4.9), libinsighttoolkit4.12 (>= 4.12.0-dfsg1-2~), liblapack3 | liblapack.so.3, libstdc++6 (>= 5.2) Section: science Priority: optional Homepage: http://plastimatch.org Description: medical image reconstruction and registration Plastimatch is an open source software for deformable image registration. It is designed for high-performance volumetric registration of medical images, such as X-ray computed tomography (CT), magnetic resonance imaging (MRI), and positron emission tomography(PET). Software features include: * B-spline method for deformable image registration (GPU and multicore accelerated), including support for image masking, landmark penalties, and regularization * Demons method for deformable image registration (GPU accelerated) * Multi-atlas segmentation * ITK-based algorithms for translation, rigid, affine, multiple demons methods, and B-spline registration * Pipelined, multi-stage registration framework with seamless conversion between most algorithms and transform types * Landmark-based deformable registration using thinplate splines for global registration * Landmark-based deformable registration using radial basis functions for local corrections * Broad support for 3D image file formats (using ITK), including DICOM, Nifti, NRRD, MetaImage, and Analyze * Extensive toolchain for radiotherapy research, including support for DICOM, DICOM-RT, DICOM SRO, XiO file format, gamma analysis, contour manipulation, contour overlap analysis, and vector field analysis Plastimatch also features two handy utilities which are not directly related to image registration: * FDK cone-beam CT reconstruction (GPU and multicore accelerated) * Digitally reconstructed radiograph (DRR) generation (GPU and multicore accelerated) Original-Maintainer: Debian Med Packaging Team drwxr-xr-x root/root 0 2017-08-22 21:09 ./ drwxr-xr-x root/root 0 2017-08-22 21:09 ./usr/ drwxr-xr-x root/root 0 2017-08-22 21:09 ./usr/bin/ -rwxr-xr-x root/root 17880 2017-08-22 21:09 ./usr/bin/drr -rwxr-xr-x root/root 9688 2017-08-22 21:09 ./usr/bin/fdk -rwxr-xr-x root/root 177752 2017-08-22 21:09 ./usr/bin/landmark_warp -rwxr-xr-x root/root 1197656 2017-08-22 21:09 ./usr/bin/plastimatch drwxr-xr-x root/root 0 2017-08-22 21:09 ./usr/lib/ lrwxrwxrwx root/root 0 2017-08-22 21:09 ./usr/lib/libplmbase.so -> libplmbase.so.1.6 -rw-r--r-- root/root 5221956 2017-08-22 21:09 ./usr/lib/libplmbase.so.1.6 lrwxrwxrwx root/root 0 2017-08-22 21:09 ./usr/lib/libplmdose.so -> libplmdose.so.1.6 -rw-r--r-- root/root 189880 2017-08-22 21:09 ./usr/lib/libplmdose.so.1.6 lrwxrwxrwx root/root 0 2017-08-22 21:09 ./usr/lib/libplmreconstruct.so -> libplmreconstruct.so.1.6 -rw-r--r-- root/root 21868 2017-08-22 21:09 ./usr/lib/libplmreconstruct.so.1.6 lrwxrwxrwx root/root 0 2017-08-22 21:09 ./usr/lib/libplmregister.so -> libplmregister.so.1.6 -rw-r--r-- root/root 1492460 2017-08-22 21:09 ./usr/lib/libplmregister.so.1.6 lrwxrwxrwx root/root 0 2017-08-22 21:09 ./usr/lib/libplmsegment.so -> libplmsegment.so.1.6 -rw-r--r-- root/root 1291832 2017-08-22 21:09 ./usr/lib/libplmsegment.so.1.6 lrwxrwxrwx root/root 0 2017-08-22 21:09 ./usr/lib/libplmsys.so -> libplmsys.so.1.6 -rw-r--r-- root/root 66980 2017-08-22 21:09 ./usr/lib/libplmsys.so.1.6 lrwxrwxrwx root/root 0 2017-08-22 21:09 ./usr/lib/libplmutil.so -> libplmutil.so.1.6 -rw-r--r-- root/root 1480316 2017-08-22 21:09 ./usr/lib/libplmutil.so.1.6 drwxr-xr-x root/root 0 2017-08-22 21:09 ./usr/share/ drwxr-xr-x root/root 0 2017-08-22 21:09 ./usr/share/doc/ drwxr-xr-x root/root 0 2017-08-22 21:09 ./usr/share/doc/plastimatch/ -rw-r--r-- root/root 969 2016-12-04 23:09 ./usr/share/doc/plastimatch/COPYRIGHT.TXT -rw-r--r-- root/root 1043 2016-12-04 23:09 ./usr/share/doc/plastimatch/README.TXT -rw-r--r-- root/root 1222 2017-08-22 21:09 ./usr/share/doc/plastimatch/changelog.Debian.gz -rw-r--r-- root/root 13266 2016-12-04 22:34 ./usr/share/doc/plastimatch/copyright drwxr-xr-x root/root 0 2017-08-22 21:09 ./usr/share/lintian/ drwxr-xr-x root/root 0 2017-08-22 21:09 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 91 2016-12-04 22:34 ./usr/share/lintian/overrides/plastimatch drwxr-xr-x root/root 0 2017-08-22 21:09 ./usr/share/man/ drwxr-xr-x root/root 0 2017-08-22 21:09 ./usr/share/man/man1/ -rw-r--r-- root/root 2418 2017-08-22 21:09 ./usr/share/man/man1/drr.1.gz -rw-r--r-- root/root 1933 2017-08-22 21:09 ./usr/share/man/man1/fdk.1.gz -rw-r--r-- root/root 1522 2017-08-22 21:09 ./usr/share/man/man1/landmark_warp.1.gz -rw-r--r-- root/root 15095 2017-08-22 21:09 ./usr/share/man/man1/plastimatch.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Not removing build depends: as requested Keeping session: +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build-Space: 830364 Build-Time: 1437 Distribution: artful-proposed Host Architecture: armhf Install-Time: 62 Job: plastimatch_1.6.5+dfsg.1-1build4.dsc Machine Architecture: arm64 Package: plastimatch Package-Time: 1502 Source-Version: 1.6.5+dfsg.1-1build4 Space: 830364 Status: successful Version: 1.6.5+dfsg.1-1build4 -------------------------------------------------------------------------------- Finished at 20170822-2137 Build needed 00:25:02, 830364k disc space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-13282669'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-13282669/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-13282669'] Unmounting chroot for build PACKAGEBUILD-13282669... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-13282669'] Removing build PACKAGEBUILD-13282669