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ncbi-tools6 package

ncbi-tools6 6.1.20110713-3 source package in Ubuntu

Changelog

ncbi-tools6 (6.1.20110713-3) unstable; urgency=low

  * debian/{libncbi6-dev,ncbi-tools-bin}.install: move /usr/bin/asntool
    and /usr/bin/errhdr from libncbi6-dev to ncbi-tools-bin so that the
    former can properly be Multi-Arch: same.  (Closes: #646970.)
  * debian/libncbi6-dev.NEWS.debian: note the above move.
  * debian/control: adjust descriptions and relationships accordingly.
  * debian/{libncbi6-dev,ncbi-tools-bin}.lintian-overrides: update accordingly.
  * debian/rules:
    - Don't try to give libncbi6-dev manpages or menu entries.
    - Compress the giant ncbi-rrna-data package with xz -7e (the sweet spot).
 -- Ubuntu Archive Auto-Sync <email address hidden>   Thu,  10 Nov 2011 16:42:00 +0000

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Uploaded by:
Ubuntu Archive Auto-Sync
Uploaded to:
Precise
Original maintainer:
Debian Med
Architectures:
any all
Section:
oldlibs
Urgency:
Low Urgency

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File Size SHA-256 Checksum
ncbi-tools6_6.1.20110713.orig.tar.gz 65.4 MiB eb269af6ca271a8df770ac221b9e993f16870f533ba4d0611b26820e8f65fd2b
ncbi-tools6_6.1.20110713-3.diff.gz 129.9 KiB ff4cfb5caec1ece91cec69c9b4855716c6837b97acfd2445d0f0201d8c880d16
ncbi-tools6_6.1.20110713-3.dsc 2.6 KiB b2653863a2419629e5d73c92ebda3d1b83da852e312e476f099a3286d32657af

Available diffs

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Binary packages built by this source

blast2: Basic Local Alignment Search Tool

 The famous sequence alignment program. This is "official" NCBI version,
 #2. The blastall executable allows you to give a nucleotide or protein
 sequence to the program. It is compared against databases and a summary of
 matches is returned to the user.
 .
 Note that databases are not included in Debian; they must be retrieved
 manually.

libncbi6: NCBI libraries for biology applications

 The NCBI Software Development Toolkit was developed for the production and
 distribution of GenBank, Entrez, BLAST, and related services by NCBI. It
 allows you to read and write NCBI ASN.1 files, builds Blast or Entrez, etc.

libncbi6-dbg: NCBI libraries for biology applications (debugging symbols)

 This package is useful to provide a backtrace with symbol names in a
 debugger; this facilitates interpretation of core dumps, and aids in finding
 logic errors in programs using the libraries in this package (or the
 libraries themselves).
 .
 Non-programmers will likely have little use for this package. See the
 libncbi6 package for more information.

libncbi6-dev: NCBI libraries for biology applications (development files)

 This package supplies development versions of NCBI's non-graphical C
 libraries, along with the corresponding header files.

libvibrant6-dev: NCBI libraries for graphic biology applications (development files)

 Vibrant allows you to develop portable (Motif, MS-Windows, Mac-OS) graphic
 biological applications.

libvibrant6a: NCBI libraries for graphic biology applications

 This is the library for those who just want to run Vibrant applications.
 It also includes a wrapper (vibrate) that allows many NCBI applications to
 provide a GUI for selecting options.

libvibrant6a-dbg: NCBI libraries for graphic biology applications (unstripped)

 This package is useful to provide a backtrace with symbol names in a
 debugger; this facilitates interpretation of core dumps, and aids in finding
 logic errors in programs using the libraries in this package (or the
 libraries themselves).
 .
 Non-programmers will likely have little use for this package. See the
 libvibrant6a package for more information.

ncbi-tools-bin: NCBI libraries for biology applications (text-based utilities)

 This package includes various utilities distributed with the NCBI C SDK,
 including the development tools asntool and errhdr (formerly of
 libncbi6-dev). None of the programs in this package require X; you can
 find the X-based utilities in the ncbi-tools-x11 package. BLAST and
 related tools are in a separate package (blast2).

ncbi-tools-x11: NCBI libraries for biology applications (X-based utilities)

 This package includes some X-based utilities distributed with the
 NCBI C SDK: Cn3D, Network Entrez, Sequin, ddv, and udv. These
 programs are not part of ncbi-tools-bin because they depend on
 several additional library packages.