https://launchpad.net/ubuntu/+source/ncbi-blast+/2.7.1-2/+build/15776199 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux lcy01-amd64-002 4.4.0-140-generic #166-Ubuntu SMP Wed Nov 14 20:09:47 UTC 2018 x86_64 Buildd toolchain package versions: launchpad-buildd_165 python-lpbuildd_165 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 14 Dec 03:13:57 ntpdate[1804]: adjust time server 10.211.37.1 offset 0.290404 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15776199 /home/buildd/filecache-default/b71572c9405b6ce6ff1d1ad001cf764bb07f52ae Creating target for build PACKAGEBUILD-15776199 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15776199 Starting target for build PACKAGEBUILD-15776199 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15776199 'deb http://ftpmaster.internal/ubuntu disco main universe' 'deb http://ftpmaster.internal/ubuntu disco-security main universe' 'deb http://ftpmaster.internal/ubuntu disco-updates main universe' 'deb http://ftpmaster.internal/ubuntu disco-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-15776199 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15776199 Updating target for build PACKAGEBUILD-15776199 Get:1 http://ftpmaster.internal/ubuntu disco InRelease [243 kB] Get:2 http://ftpmaster.internal/ubuntu disco-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu disco-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed InRelease [93.2 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 Packages [1005 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main Translation-en [509 kB] Get:7 http://ftpmaster.internal/ubuntu disco/universe amd64 Packages [8973 kB] Get:8 http://ftpmaster.internal/ubuntu disco/universe Translation-en [5152 kB] Get:9 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 Packages [72.1 kB] Get:10 http://ftpmaster.internal/ubuntu disco-proposed/main Translation-en [33.0 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/universe amd64 Packages [612 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/universe Translation-en [274 kB] Fetched 17.1 MB in 3s (6444 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libgdbm5 libperl5.26 perl-modules-5.26 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libgdbm6 libperl5.28 perl-modules-5.28 The following packages will be upgraded: apt base-files binutils binutils-common binutils-x86-64-linux-gnu cpp cpp-8 dash dmsetup dpkg dpkg-dev e2fslibs e2fsprogs fakeroot findutils g++ g++-8 gcc gcc-8 gcc-8-base grep hostname init init-system-helpers libapparmor1 libapt-pkg5.0 libasan5 libatomic1 libaudit-common libaudit1 libbinutils libcap-ng0 libcc1-0 libcom-err2 libcomerr2 libdb5.3 libdevmapper1.02.1 libdpkg-perl libext2fs2 libfakeroot libffi6 libgcc-8-dev libgcc1 libgcrypt20 libgdbm-compat4 libgmp10 libgnutls30 libgomp1 libgpg-error0 libhogweed4 libip4tc0 libitm1 libkmod2 liblsan0 libmpfr6 libmpx2 libnettle6 libquadmath0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsqlite3-0 libss2 libssl1.1 libstdc++-8-dev libstdc++6 libsystemd0 libtsan0 libubsan1 libudev1 linux-libc-dev lockfile-progs openssl perl perl-base sed systemd systemd-sysv tar tzdata 81 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 55.6 MB of archives. After this operation, 48.9 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu disco/main amd64 base-files amd64 10.1ubuntu8 [60.1 kB] Get:2 http://ftpmaster.internal/ubuntu disco/main amd64 tar amd64 1.30+dfsg-3 [242 kB] Get:3 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 dpkg amd64 1.19.2ubuntu2 [1101 kB] Get:4 http://ftpmaster.internal/ubuntu disco/main amd64 dash amd64 0.5.10.2-2 [89.6 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main amd64 findutils amd64 4.6.0+git+20181018-1 [295 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main amd64 grep amd64 3.1-3 [152 kB] Get:7 http://ftpmaster.internal/ubuntu disco/main amd64 hostname amd64 3.21 [11.2 kB] Get:8 http://ftpmaster.internal/ubuntu disco/main amd64 perl-modules-5.28 all 5.28.1-3 [2812 kB] Get:9 http://ftpmaster.internal/ubuntu disco/main amd64 libgdbm6 amd64 1.18.1-2 [27.6 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main amd64 libgdbm-compat4 amd64 1.18.1-2 [6152 B] Get:11 http://ftpmaster.internal/ubuntu disco/main amd64 libperl5.28 amd64 5.28.1-3 [3820 kB] Get:12 http://ftpmaster.internal/ubuntu disco/main amd64 perl amd64 5.28.1-3 [204 kB] Get:13 http://ftpmaster.internal/ubuntu disco/main amd64 perl-base amd64 5.28.1-3 [1513 kB] Get:14 http://ftpmaster.internal/ubuntu disco/main amd64 libdb5.3 amd64 5.3.28+dfsg1-0.2 [672 kB] Get:15 http://ftpmaster.internal/ubuntu disco/main amd64 sed amd64 4.5-2 [186 kB] Get:16 http://ftpmaster.internal/ubuntu disco/main amd64 init-system-helpers all 1.56 [38.8 kB] Get:17 http://ftpmaster.internal/ubuntu disco/main amd64 libquadmath0 amd64 8.2.0-12ubuntu1 [134 kB] Get:18 http://ftpmaster.internal/ubuntu disco/main amd64 libubsan1 amd64 8.2.0-12ubuntu1 [121 kB] Get:19 http://ftpmaster.internal/ubuntu disco/main amd64 gcc-8-base amd64 8.2.0-12ubuntu1 [18.6 kB] Get:20 http://ftpmaster.internal/ubuntu disco/main amd64 libgcc1 amd64 1:8.2.0-12ubuntu1 [40.7 kB] Get:21 http://ftpmaster.internal/ubuntu disco/main amd64 libitm1 amd64 8.2.0-12ubuntu1 [28.1 kB] Get:22 http://ftpmaster.internal/ubuntu disco/main amd64 libasan5 amd64 8.2.0-12ubuntu1 [364 kB] Get:23 http://ftpmaster.internal/ubuntu disco/main amd64 libgomp1 amd64 8.2.0-12ubuntu1 [76.4 kB] Get:24 http://ftpmaster.internal/ubuntu disco/main amd64 libatomic1 amd64 8.2.0-12ubuntu1 [9088 B] Get:25 http://ftpmaster.internal/ubuntu disco/main amd64 liblsan0 amd64 8.2.0-12ubuntu1 [132 kB] Get:26 http://ftpmaster.internal/ubuntu disco/main amd64 libtsan0 amd64 8.2.0-12ubuntu1 [287 kB] Get:27 http://ftpmaster.internal/ubuntu disco/main amd64 libmpx2 amd64 8.2.0-12ubuntu1 [11.7 kB] Get:28 http://ftpmaster.internal/ubuntu disco/main amd64 cpp-8 amd64 8.2.0-12ubuntu1 [7225 kB] Get:29 http://ftpmaster.internal/ubuntu disco/main amd64 libcc1-0 amd64 8.2.0-12ubuntu1 [39.6 kB] Get:30 http://ftpmaster.internal/ubuntu disco/main amd64 gcc-8 amd64 8.2.0-12ubuntu1 [8001 kB] Get:31 http://ftpmaster.internal/ubuntu disco/main amd64 g++-8 amd64 8.2.0-12ubuntu1 [8112 kB] Get:32 http://ftpmaster.internal/ubuntu disco/main amd64 libstdc++-8-dev amd64 8.2.0-12ubuntu1 [1540 kB] Get:33 http://ftpmaster.internal/ubuntu disco/main amd64 libgcc-8-dev amd64 8.2.0-12ubuntu1 [2304 kB] Get:34 http://ftpmaster.internal/ubuntu disco/main amd64 libstdc++6 amd64 8.2.0-12ubuntu1 [398 kB] Get:35 http://ftpmaster.internal/ubuntu disco/main amd64 libgmp10 amd64 2:6.1.2+dfsg-4 [236 kB] Get:36 http://ftpmaster.internal/ubuntu disco/main amd64 libmpfr6 amd64 4.0.1-2 [241 kB] Get:37 http://ftpmaster.internal/ubuntu disco/main amd64 libbinutils amd64 2.31.1-10ubuntu1 [482 kB] Get:38 http://ftpmaster.internal/ubuntu disco/main amd64 binutils-common amd64 2.31.1-10ubuntu1 [194 kB] Get:39 http://ftpmaster.internal/ubuntu disco/main amd64 binutils amd64 2.31.1-10ubuntu1 [3396 B] Get:40 http://ftpmaster.internal/ubuntu disco/main amd64 binutils-x86-64-linux-gnu amd64 2.31.1-10ubuntu1 [1830 kB] Get:41 http://ftpmaster.internal/ubuntu disco/main amd64 libudev1 amd64 239-7ubuntu15 [54.7 kB] Get:42 http://ftpmaster.internal/ubuntu disco/main amd64 libapt-pkg5.0 amd64 1.8.0~alpha2ubuntu1 [814 kB] Get:43 http://ftpmaster.internal/ubuntu disco/main amd64 libnettle6 amd64 3.4.1~rc1-1 [111 kB] Get:44 http://ftpmaster.internal/ubuntu disco/main amd64 libhogweed4 amd64 3.4.1~rc1-1 [140 kB] Get:45 http://ftpmaster.internal/ubuntu disco/main amd64 libgnutls30 amd64 3.6.4-2ubuntu2 [747 kB] Get:46 http://ftpmaster.internal/ubuntu disco/main amd64 libseccomp2 amd64 2.3.3-3ubuntu2 [38.9 kB] Get:47 http://ftpmaster.internal/ubuntu disco/main amd64 apt amd64 1.8.0~alpha2ubuntu1 [1182 kB] Get:48 http://ftpmaster.internal/ubuntu disco/main amd64 systemd-sysv amd64 239-7ubuntu15 [9396 B] Get:49 http://ftpmaster.internal/ubuntu disco/main amd64 libapparmor1 amd64 2.12-4ubuntu10 [29.9 kB] Get:50 http://ftpmaster.internal/ubuntu disco/main amd64 libaudit-common all 1:2.8.3-1ubuntu3 [4068 B] Get:51 http://ftpmaster.internal/ubuntu disco/main amd64 libcap-ng0 amd64 0.7.9-1build1 [10.9 kB] Get:52 http://ftpmaster.internal/ubuntu disco/main amd64 libaudit1 amd64 1:2.8.3-1ubuntu3 [38.8 kB] Get:53 http://ftpmaster.internal/ubuntu disco/main amd64 libgpg-error0 amd64 1.32-3 [56.0 kB] Get:54 http://ftpmaster.internal/ubuntu disco/main amd64 libkmod2 amd64 25-1ubuntu2 [41.7 kB] Get:55 http://ftpmaster.internal/ubuntu disco/main amd64 systemd amd64 239-7ubuntu15 [2971 kB] Get:56 http://ftpmaster.internal/ubuntu disco/main amd64 libsystemd0 amd64 239-7ubuntu15 [212 kB] Get:57 http://ftpmaster.internal/ubuntu disco/main amd64 libext2fs2 amd64 1.44.4-2ubuntu1 [159 kB] Get:58 http://ftpmaster.internal/ubuntu disco/main amd64 e2fsprogs amd64 1.44.4-2ubuntu1 [513 kB] Get:59 http://ftpmaster.internal/ubuntu disco/main amd64 init amd64 1.56 [6652 B] Get:60 http://ftpmaster.internal/ubuntu disco/main amd64 libgcrypt20 amd64 1.8.4-3ubuntu1 [420 kB] Get:61 http://ftpmaster.internal/ubuntu disco/main amd64 libselinux1 amd64 2.8-1build2 [68.6 kB] Get:62 http://ftpmaster.internal/ubuntu disco/main amd64 libsemanage-common all 2.8-1build2 [6892 B] Get:63 http://ftpmaster.internal/ubuntu disco/main amd64 libsemanage1 amd64 2.8-1build2 [85.1 kB] Get:64 http://ftpmaster.internal/ubuntu disco/main amd64 libffi6 amd64 3.2.1-9 [18.1 kB] Get:65 http://ftpmaster.internal/ubuntu disco/main amd64 libcom-err2 amd64 1.44.4-2ubuntu1 [8844 B] Get:66 http://ftpmaster.internal/ubuntu disco/main amd64 libss2 amd64 1.44.4-2ubuntu1 [11.1 kB] Get:67 http://ftpmaster.internal/ubuntu disco/main amd64 libdevmapper1.02.1 amd64 2:1.02.145-4.1ubuntu4 [127 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main amd64 dmsetup amd64 2:1.02.145-4.1ubuntu4 [74.6 kB] Get:69 http://ftpmaster.internal/ubuntu disco/main amd64 libip4tc0 amd64 1.6.1-2ubuntu3 [19.7 kB] Get:70 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libsqlite3-0 amd64 3.26.0-3 [530 kB] Get:71 http://ftpmaster.internal/ubuntu disco/main amd64 libssl1.1 amd64 1.1.1a-1ubuntu2 [1297 kB] Get:72 http://ftpmaster.internal/ubuntu disco/main amd64 openssl amd64 1.1.1a-1ubuntu2 [618 kB] Get:73 http://ftpmaster.internal/ubuntu disco/main amd64 tzdata all 2018g-1 [188 kB] Get:74 http://ftpmaster.internal/ubuntu disco/main amd64 g++ amd64 4:8.2.0-2ubuntu2 [1608 B] Get:75 http://ftpmaster.internal/ubuntu disco/main amd64 gcc amd64 4:8.2.0-2ubuntu2 [5224 B] Get:76 http://ftpmaster.internal/ubuntu disco/main amd64 cpp amd64 4:8.2.0-2ubuntu2 [27.6 kB] Get:77 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 dpkg-dev all 1.19.2ubuntu2 [549 kB] Get:78 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 libdpkg-perl all 1.19.2ubuntu2 [227 kB] Get:79 http://ftpmaster.internal/ubuntu disco/main amd64 e2fslibs amd64 1.44.4-2ubuntu1 [2712 B] Get:80 http://ftpmaster.internal/ubuntu disco/main amd64 libfakeroot amd64 1.23-1 [25.3 kB] Get:81 http://ftpmaster.internal/ubuntu disco/main amd64 fakeroot amd64 1.23-1 [62.4 kB] Get:82 http://ftpmaster.internal/ubuntu disco/main amd64 libcomerr2 amd64 1.44.4-2ubuntu1 [2712 B] Get:83 http://ftpmaster.internal/ubuntu disco-proposed/main amd64 linux-libc-dev amd64 4.19.0-9.10 [1041 kB] Get:84 http://ftpmaster.internal/ubuntu disco/main amd64 lockfile-progs amd64 0.1.18 [9872 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 55.6 MB in 1s (44.5 MB/s) (Reading database ... 12650 files and directories currently installed.) 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Processing triggers for libc-bin (2.28-0ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-15776199 amd64 disco-proposed -c chroot:build-PACKAGEBUILD-15776199 --arch=amd64 --dist=disco-proposed --nolog -A ncbi-blast+_2.7.1-2.dsc Initiating build PACKAGEBUILD-15776199 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-140-generic #166-Ubuntu SMP Wed Nov 14 20:09:47 UTC 2018 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lcy01-amd64-002.buildd +==============================================================================+ | ncbi-blast+ 2.7.1-2 (amd64) 14 Dec 2018 03:14 | +==============================================================================+ Package: ncbi-blast+ Version: 2.7.1-2 Source Version: 2.7.1-2 Distribution: disco-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' with '<>' I: NOTICE: Log filtering will replace 'build/ncbi-blast+-GloMLK' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-15776199/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- ncbi-blast+_2.7.1-2.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/build/ncbi-blast+-GloMLK/resolver-Fldndq/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/build/ncbi-blast+-GloMLK/resolver-Fldndq/apt_archive ./ InRelease Get:2 copy:/build/ncbi-blast+-GloMLK/resolver-Fldndq/apt_archive ./ Release [2119 B] Ign:3 copy:/build/ncbi-blast+-GloMLK/resolver-Fldndq/apt_archive ./ Release.gpg Get:4 copy:/build/ncbi-blast+-GloMLK/resolver-Fldndq/apt_archive ./ Sources [214 B] Get:5 copy:/build/ncbi-blast+-GloMLK/resolver-Fldndq/apt_archive ./ Packages [527 B] Fetched 2860 B in 0s (0 B/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libgdbm5 libperl5.26 perl-modules-5.26 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/build/ncbi-blast+-GloMLK/resolver-Fldndq/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14507 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: autotools-dev, debhelper (>= 9), libboost-test-dev, libbz2-dev, libc-dev-bin, libgnutls28-dev, libmbedtls-dev, libpcre3-dev, time, zlib1g-dev Filtered Build-Depends: autotools-dev, debhelper (>= 9), libboost-test-dev, libbz2-dev, libc-dev-bin, libgnutls28-dev, libmbedtls-dev, libpcre3-dev, time, zlib1g-dev dpkg-deb: building package 'sbuild-build-depends-ncbi-blast+-dummy' in '/build/ncbi-blast+-GloMLK/resolver-tWossd/apt_archive/sbuild-build-depends-ncbi-blast+-dummy.deb'. Ign:1 copy:/build/ncbi-blast+-GloMLK/resolver-tWossd/apt_archive ./ InRelease Get:2 copy:/build/ncbi-blast+-GloMLK/resolver-tWossd/apt_archive ./ Release [2119 B] Ign:3 copy:/build/ncbi-blast+-GloMLK/resolver-tWossd/apt_archive ./ Release.gpg Get:4 copy:/build/ncbi-blast+-GloMLK/resolver-tWossd/apt_archive ./ Sources [272 B] Get:5 copy:/build/ncbi-blast+-GloMLK/resolver-tWossd/apt_archive ./ Packages [589 B] Fetched 2980 B in 0s (0 B/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install ncbi-blast+ build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libgdbm5 libperl5.26 perl-modules-5.26 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libboost-test-dev libboost-test1.67-dev libboost-test1.67.0 libboost1.67-dev libbsd0 libbz2-dev libcroco3 libelf1 libevent-2.1-6 libfile-stripnondeterminism-perl libglib2.0-0 libgmp-dev libgmpxx4ldbl libgnutls-dane0 libgnutls-openssl27 libgnutls28-dev libgnutlsxx28 libicu63 libidn2-dev libmagic-mgc libmagic1 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 libp11-kit-dev libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libsigsegv2 libtasn1-6-dev libtool libunbound8 libxml2 m4 man-db nettle-dev po-debconf time zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libboost1.67-doc libboost-atomic1.67-dev libboost-chrono1.67-dev libboost-container1.67-dev libboost-context1.67-dev libboost-coroutine1.67-dev libboost-date-time1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev libboost-filesystem1.67-dev libboost-graph1.67-dev libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev libboost-program-options1.67-dev libboost-python1.67-dev libboost-random1.67-dev libboost-regex1.67-dev libboost-serialization1.67-dev libboost-signals1.67-dev libboost-stacktrace1.67-dev libboost-system1.67-dev libboost-thread1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev gmp-doc libgmp10-doc libmpfr-dev dns-root-data gnutls-doc gnutls-bin libmbedtls-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libtasn1-doc libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libboost-test-dev libboost-test1.67-dev libboost-test1.67.0 libboost1.67-dev libbsd0 libbz2-dev libcroco3 libelf1 libevent-2.1-6 libfile-stripnondeterminism-perl libglib2.0-0 libgmp-dev libgmpxx4ldbl libgnutls-dane0 libgnutls-openssl27 libgnutls28-dev libgnutlsxx28 libicu63 libidn2-dev libmagic-mgc libmagic1 libmbedcrypto3 libmbedtls-dev libmbedtls12 libmbedx509-0 libp11-kit-dev libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libsigsegv2 libtasn1-6-dev libtool libunbound8 libxml2 m4 man-db nettle-dev po-debconf sbuild-build-depends-ncbi-blast+-dummy time zlib1g-dev 0 upgraded, 58 newly installed, 0 to remove and 0 not upgraded. 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Setting up time (1.7-25.1build1) ... Setting up libicu63:amd64 (63.1-5) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libelf1:amd64 (0.175-1) ... Setting up groff-base (1.22.3-10) ... Setting up libglib2.0-0:amd64 (2.58.1-2) ... No schema files found: doing nothing. Setting up libp11-kit-dev:amd64 (0.23.14-2) ... Setting up libtasn1-6-dev:amd64 (4.13-3) ... Setting up gettext-base (0.19.8.1-9) ... Setting up libpipeline1:amd64 (1.5.0-2) ... Setting up m4 (1.4.18-2) ... Setting up libbsd0:amd64 (0.9.1-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7ubuntu3) ... Setting up libmagic-mgc (1:5.34-2) ... Setting up libmagic1:amd64 (1:5.34-2) ... Setting up libcroco3:amd64 (0.6.12-2) ... Setting up libgnutlsxx28:amd64 (3.6.4-2ubuntu2) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Setting up dwz (0.12-3) ... Setting up autotools-dev (20180224.1) ... Setting up libmbedcrypto3:amd64 (2.14.1-2) ... Setting up libboost1.67-dev:amd64 (1.67.0-11) ... Setting up libgnutls-openssl27:amd64 (3.6.4-2ubuntu2) ... Setting up libpcrecpp0v5:amd64 (2:8.39-11) ... Setting up libpcre32-3:amd64 (2:8.39-11) ... Setting up libmbedx509-0:amd64 (2.14.1-2) ... Setting up libpcre16-3:amd64 (2:8.39-11) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgmpxx4ldbl:amd64 (2:6.1.2+dfsg-4) ... Setting up libidn2-dev:amd64 (2.0.5-1) ... Setting up libboost-test1.67.0:amd64 (1.67.0-11) ... Setting up autopoint (0.19.8.1-9) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-0ubuntu2) ... Setting up libfile-stripnondeterminism-perl (1.0.0-1) ... Setting up libgmp-dev:amd64 (2:6.1.2+dfsg-4) ... Setting up libpcre3-dev:amd64 (2:8.39-11) ... Setting up libunbound8:amd64 (1.8.1-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libboost-test1.67-dev:amd64 (1.67.0-11) ... Setting up autoconf (2.69-11) ... Setting up file (1:5.34-2) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libmbedtls12:amd64 (2.14.1-2) ... Setting up libgnutls-dane0:amd64 (3.6.4-2ubuntu2) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up man-db (2.8.4-3) ... Not building database; man-db/auto-update is not 'true'. Setting up nettle-dev:amd64 (3.4.1~rc1-1) ... Setting up libboost-test-dev:amd64 (1.67.0.1) ... Setting up libtool (2.4.6-6) ... Setting up po-debconf (1.0.21) ... Setting up libgnutls28-dev:amd64 (3.6.4-2ubuntu2) ... Setting up libmbedtls-dev:amd64 (2.14.1-2) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.0.0-1) ... Setting up debhelper (11.5.3ubuntu1) ... Setting up sbuild-build-depends-ncbi-blast+-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-140-generic amd64 (x86_64) Toolchain package versions: binutils_2.31.1-10ubuntu1 dpkg-dev_1.19.2ubuntu2 g++-8_8.2.0-12ubuntu1 gcc-8_8.2.0-12ubuntu1 libc6-dev_2.28-0ubuntu1 libstdc++-8-dev_8.2.0-12ubuntu1 libstdc++6_8.2.0-12ubuntu1 linux-libc-dev_4.19.0-9.10 Package versions: adduser_3.117ubuntu1 advancecomp_2.1-1 apt_1.8.0~alpha2ubuntu1 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1ubuntu8 base-passwd_3.5.45 bash_4.4.18-2ubuntu3 binutils_2.31.1-10ubuntu1 binutils-common_2.31.1-10ubuntu1 binutils-x86-64-linux-gnu_2.31.1-10ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.32-0.1ubuntu2 build-essential_12.5ubuntu2 bzip2_1.0.6-9 ca-certificates_20180409 coreutils_8.28-1ubuntu2 cpp_4:8.2.0-2ubuntu2 cpp-8_8.2.0-12ubuntu1 dash_0.5.10.2-2 debconf_1.5.69 debhelper_11.5.3ubuntu1 debianutils_4.8.6 dh-autoreconf_19 dh-strip-nondeterminism_1.0.0-1 diffutils_1:3.6-1 dmsetup_2:1.02.145-4.1ubuntu4 dpkg_1.19.2ubuntu2 dpkg-dev_1.19.2ubuntu2 dwz_0.12-3 e2fslibs_1.44.4-2ubuntu1 e2fsprogs_1.44.4-2ubuntu1 fakeroot_1.23-1 fdisk_2.32-0.1ubuntu2 file_1:5.34-2 findutils_4.6.0+git+20181018-1 g++_4:8.2.0-2ubuntu2 g++-8_8.2.0-12ubuntu1 gcc_4:8.2.0-2ubuntu2 gcc-8_8.2.0-12ubuntu1 gcc-8-base_8.2.0-12ubuntu1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpg_2.2.8-3ubuntu1 gpg-agent_2.2.8-3ubuntu1 gpgconf_2.2.8-3ubuntu1 gpgv_2.2.8-3ubuntu1 grep_3.1-3 groff-base_1.22.3-10 gzip_1.6-5ubuntu2 hostname_3.21 init_1.56 init-system-helpers_1.56 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3build1 libapparmor1_2.12-4ubuntu10 libapt-pkg5.0_1.8.0~alpha2ubuntu1 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.1 libasan5_8.2.0-12ubuntu1 libassuan0_2.5.1-2 libatomic1_8.2.0-12ubuntu1 libattr1_1:2.4.47-2build1 libaudit-common_1:2.8.3-1ubuntu3 libaudit1_1:2.8.3-1ubuntu3 libbinutils_2.31.1-10ubuntu1 libblkid1_2.32-0.1ubuntu2 libboost-test-dev_1.67.0.1 libboost-test1.67-dev_1.67.0-11 libboost-test1.67.0_1.67.0-11 libboost1.67-dev_1.67.0-11 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libbz2-dev_1.0.6-9 libc-bin_2.28-0ubuntu1 libc-dev-bin_2.28-0ubuntu1 libc6_2.28-0ubuntu1 libc6-dev_2.28-0ubuntu1 libcap-ng0_0.7.9-1build1 libcap2_1:2.25-1.2 libcc1-0_8.2.0-12ubuntu1 libcom-err2_1.44.4-2ubuntu1 libcomerr2_1.44.4-2ubuntu1 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.4-2ubuntu2 libdb5.3_5.3.28+dfsg1-0.2 libdebconfclient0_0.244ubuntu1 libdevmapper1.02.1_2:1.02.145-4.1ubuntu4 libdpkg-perl_1.19.2ubuntu2 libelf1_0.175-1 libevent-2.1-6_2.1.8-stable-4build1 libext2fs2_1.44.4-2ubuntu1 libfakeroot_1.23-1 libfdisk1_2.32-0.1ubuntu2 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.0.0-1 libgcc-8-dev_8.2.0-12ubuntu1 libgcc1_1:8.2.0-12ubuntu1 libgcrypt20_1.8.4-3ubuntu1 libgdbm-compat4_1.18.1-2 libgdbm5_1.14.1-6 libgdbm6_1.18.1-2 libglib2.0-0_2.58.1-2 libgmp-dev_2:6.1.2+dfsg-4 libgmp10_2:6.1.2+dfsg-4 libgmpxx4ldbl_2:6.1.2+dfsg-4 libgnutls-dane0_3.6.4-2ubuntu2 libgnutls-openssl27_3.6.4-2ubuntu2 libgnutls28-dev_3.6.4-2ubuntu2 libgnutls30_3.6.4-2ubuntu2 libgnutlsxx28_3.6.4-2ubuntu2 libgomp1_8.2.0-12ubuntu1 libgpg-error0_1.32-3 libhogweed4_3.4.1~rc1-1 libicu63_63.1-5 libidn11_1.33-2.2ubuntu1 libidn2-0_2.0.5-1 libidn2-dev_2.0.5-1 libip4tc0_1.6.1-2ubuntu3 libisl19_0.20-2 libitm1_8.2.0-12ubuntu1 libjson-c3_0.12.1-1.3 libkmod2_25-1ubuntu2 liblockfile-bin_1.14-1.1 liblockfile1_1.14-1.1 liblsan0_8.2.0-12ubuntu1 liblz4-1_1.8.2-1ubuntu1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmbedcrypto3_2.14.1-2 libmbedtls-dev_2.14.1-2 libmbedtls12_2.14.1-2 libmbedx509-0_2.14.1-2 libmount1_2.32-0.1ubuntu2 libmpc3_1.1.0-1 libmpfr6_4.0.1-2 libmpx2_8.2.0-12ubuntu1 libncurses6_6.1+20180210-4ubuntu1 libncursesw6_6.1+20180210-4ubuntu1 libnettle6_3.4.1~rc1-1 libnpth0_1.6-1 libp11-kit-dev_0.23.14-2 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-3.6ubuntu2 libpam-modules-bin_1.1.8-3.6ubuntu2 libpam-runtime_1.1.8-3.6ubuntu2 libpam0g_1.1.8-3.6ubuntu2 libpcre16-3_2:8.39-11 libpcre3_2:8.39-11 libpcre3-dev_2:8.39-11 libpcre32-3_2:8.39-11 libpcrecpp0v5_2:8.39-11 libperl5.26_5.26.2-7 libperl5.28_5.28.1-3 libpipeline1_1.5.0-2 libpng16-16_1.6.34-2 libprocps7_2:3.3.15-2ubuntu1 libquadmath0_8.2.0-12ubuntu1 libreadline7_7.0-5 libseccomp2_2.3.3-3ubuntu2 libselinux1_2.8-1build2 libsemanage-common_2.8-1build2 libsemanage1_2.8-1build2 libsepol1_2.8-1 libsigsegv2_2.12-2 libslang2_2.3.2-1ubuntu1 libsmartcols1_2.32-0.1ubuntu2 libsqlite3-0_3.26.0-3 libss2_1.44.4-2ubuntu1 libssl1.1_1.1.1a-1ubuntu2 libstdc++-8-dev_8.2.0-12ubuntu1 libstdc++6_8.2.0-12ubuntu1 libsystemd0_239-7ubuntu15 libtasn1-6_4.13-3 libtasn1-6-dev_4.13-3 libtinfo6_6.1+20180210-4ubuntu1 libtool_2.4.6-6 libtsan0_8.2.0-12ubuntu1 libubsan1_8.2.0-12ubuntu1 libudev1_239-7ubuntu15 libunbound8_1.8.1-1 libunistring2_0.9.10-1ubuntu1 libusb-0.1-4_2:0.1.12-32 libuuid1_2.32-0.1ubuntu2 libxml2_2.9.4+dfsg1-7ubuntu3 libzstd1_1.3.5+dfsg-1ubuntu1 linux-libc-dev_4.19.0-9.10 lockfile-progs_0.1.18 login_1:4.5-1ubuntu1 lsb-base_9.20170808ubuntu1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.4-3 mawk_1.3.3-17ubuntu3 mount_2.32-0.1ubuntu2 multiarch-support_2.28-0ubuntu1 ncurses-base_6.1+20180210-4ubuntu1 ncurses-bin_6.1+20180210-4ubuntu1 nettle-dev_3.4.1~rc1-1 openssl_1.1.1a-1ubuntu2 optipng_0.7.6-1.1 passwd_1:4.5-1ubuntu1 patch_2.7.6-3 perl_5.28.1-3 perl-base_5.28.1-3 perl-modules-5.26_5.26.2-7 perl-modules-5.28_5.28.1-3 pinentry-curses_1.1.0-1build2 pkgbinarymangler_143 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu1 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-ncbi-blast+-dummy_0.invalid.0 sed_4.5-2 sensible-utils_0.0.12 systemd_239-7ubuntu15 systemd-sysv_239-7ubuntu15 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu2 tar_1.30+dfsg-3 time_1.7-25.1build1 tzdata_2018g-1 ubuntu-keyring_2018.09.18.1 util-linux_2.32-0.1ubuntu2 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 zlib1g-dev_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Thu Dec 13 03:27:22 2018 UTC gpgv: using RSA key 7C3AB9CFD230BD30DD009C591E7091B1F14A64A2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./ncbi-blast+_2.7.1-2.dsc dpkg-source: info: extracting ncbi-blast+ in ncbi-blast+-2.7.1 dpkg-source: info: unpacking ncbi-blast+_2.7.1.orig.tar.gz dpkg-source: info: unpacking ncbi-blast+_2.7.1-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying enable_clean_after_failed_compile dpkg-source: info: applying hurd_fixes dpkg-source: info: applying legacy_rename_rpsblast dpkg-source: info: applying fix_lib_deps dpkg-source: info: applying no_multiarch_rpath dpkg-source: info: applying use_pie_for_apps dpkg-source: info: applying skip_services_unit_test dpkg-source: info: applying fix_configure dpkg-source: info: applying support_x32 dpkg-source: info: applying suppress_gnutls_version_check dpkg-source: info: applying optionally_keep_sequence dpkg-source: info: applying fix_unit_tests dpkg-source: info: applying support_boost_1_67 Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-15776199 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-15776199 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-15776199 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package ncbi-blast+ dpkg-buildpackage: info: source version 2.7.1-2 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean #dh clean -Dc++ --with autotools_dev dh clean -Dc++ dh_testdir -O-Dc\+\+ dh_auto_clean -O-Dc\+\+ debian/rules override_dh_clean make[1]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' cp c++/configure.orig configure.orig.save dh_clean #Tricky - for each module directory there may be several module files #or there may be none but then there is still a module named after the #directory. Clean everything! for x in c++/src/objects/* ; do \ (cd "$x" && ( \ mods="`echo *.module`" ; \ [ "${mods#*\*}" = "$mods" ] || mods="`basename $x`" ; \ for mod in $mods ; do \ ../../../BUILD/build/new_module.sh $mod purge_sources ; \ done ) ; \ ) ; \ done /bin/sh: 2: cd: can't cd to c++/src/objects/CMakeLists.txt /bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.in /bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.sources /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.cmd /bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.sh /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found make[1]: [debian/rules:108: override_dh_clean] Error 127 (ignored) rm -rf c++/compilers/dll c++/config.log c++/Makefile rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module find -name check_exec.pid -delete rm -rf c++/BUILD mv configure.orig.save c++/configure.orig make[1]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' debian/rules build #dh build -Dc++ --with autotools_dev dh build -Dc++ dh_testdir -O-Dc\+\+ dh_update_autotools_config -O-Dc\+\+ debian/rules override_dh_auto_configure make[1]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' cd c++ && LD_LIBRARY_PATH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib${LD_LIBRARY_PATH+:$LD_LIBRARY_PATH} \ CONFIG_SHELL=/bin/bash ./configure --with-dll --with-mt --without-autodep --without-makefile-auto-update --with-flat-makefile --without-caution --without-dbapi --without-lzo --with-runpath=/usr/lib/ncbi-blast+ --with-build-root=BUILD --without-debug --without-downloaded-vdb --with-mbedtls --with-symbols CFLAGS_FOR_BUILD="-g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIE" LDFLAGS_FOR_BUILD="-Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed" \ || (tail -v -n +0 config.log BUILD/status/config.log; exit 1) configure: loading site script ./src/build-system/config.site configure: creating cache config.cache configure: WARNING: --with(out)-dbapi is deprecated configure: WARNING: please simply pass an appropriate project list checking TeamCity build number... none checking Subversion revision... unknown checking NCBI stable components' version... unknown checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking for gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E checking for gcc... gcc checking whether we are using the GNU C compiler... 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/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/omssa/Makefile config.status: creating /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/varrep/Makefile config.status: creating /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/remap/Makefile config.status: creating /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcassay/Makefile config.status: creating /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2/Makefile config.status: creating /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/./Makefile config.status: creating /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc/common/ncbi_build_ver.h config.status: creating /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc/ncbiconf_unix.h config.status: executing default commands /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib/ncbicfg.c is updated /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc/common/ncbi_build_ver.h is updated make[2]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/helpers TMPL=run_with_lock -kw all make[3]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers' gcc -c -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIE /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/helpers/run_with_lock.c -o run_with_lock.o gcc -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -fPIE -pie run_with_lock.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lm -lpthread -o run_with_lock /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f run_with_lock /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f run_with_lock /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/run_with_lock make[3]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers' make[2]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers' project_tree_builder is not found at /net/snowman/vol/export2/win-coremake/App/Ncbi/cppcore/ptb/Linux64/4.2.1/project_tree_builder Will build project_tree_builder locally ********************************************************************** Building project_tree_builder ********************************************************************** make[2]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[3]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' /usr/bin/make[4] (Makefile.precompile): Nothing to be done for `all'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' /usr/bin/make[3] (Makefile.corelib.lib): Nothing to be done for `export-headers'. /usr/bin/make[3] (Makefile.test_mt.lib): Nothing to be done for `export-headers'. /usr/bin/make[3] (Makefile.test_boost.lib): Nothing to be done for `export-headers'. /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib TMPL=corelib -w all make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_os_unix.cpp -o ncbi_os_unix.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/blob_storage.cpp -o blob_storage.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ddumpable.cpp -o ddumpable.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/env_reg.cpp -o env_reg.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/metareg.cpp -o metareg.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_config.cpp -o ncbi_config.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp: In member function 'void ncbi::CNcbiApplication::x_TryMain(ncbi::EAppDiagStream, const char*, int*, bool*)': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp:460:20: warning: catching polymorphic type 'class ncbi::CArgHelpException' by value [-Wcatch-value=] catch (CArgHelpException) { ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp: In member function 'int ncbi::CNcbiApplication::AppMain(int, const char* const*, const char* const*, ncbi::EAppDiagStream, const char*, const string&)': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp:792:20: warning: catching polymorphic type 'class ncbi::CArgException' by value [-Wcatch-value=] catch (CArgException) { ^~~~~~~~~~~~~ -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_param.cpp -o ncbi_param.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_process.cpp -o ncbi_process.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_safe_static.cpp -o ncbi_safe_static.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_signal.cpp -o ncbi_signal.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_stack.cpp -o ncbi_stack.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_system.cpp -o ncbi_system.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbiapp.cpp -o ncbiapp.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-s/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp: In member function 'bool ncbi::CArgDescriptions::x_CreateArg(const string&, const string&, bool, const string&, unsigned int, ncbi::CArgs&, bool, ncbi::CArgValue**) const': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp:2917:12: warning: catching polymorphic type 'class ncbi::CArgException' by value [-Wcatch-value=] catch (CArgException) { ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp: In function 'std::__cxx11::string ncbi::s_CArgs_ReadFromConsole(const string&, ncbi::EEchoInput, const char*)': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp:2058:18: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result] write( tty, prompt.data(), prompt.length()); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp:2087:18: warning: ignoring return value of 'ssize_t write(int, const void*, size_t)', declared with attribute warn_unused_result [-Wunused-result] write( tty, thx.data(), thx.length()); ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In static member function 'static void ncbi::CDiagContext::sx_ThreadDataTlsCleanup(ncbi::CDiagContextThreadData*, void*)': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:854:67: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations] value->GetProperties(CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbidiag.hpp:1810:34: note: declared here NCBI_DEPRECATED TProperties* GetProperties(EGetProperties flag); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::SetProperty(const string&, const string&, ncbi::CDiagContext::EPropertyMode)': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1776:16: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] catch (CException) { ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1824:49: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations] CDiagContextThreadData::eProp_Create); /* NCBI_FAKE_WARNING */ ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here CDiagContextThreadData::GetProperties(EGetProperties flag) ^~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'std::__cxx11::string ncbi::CDiagContext::GetProperty(const string&, ncbi::CDiagContext::EPropertyMode) const': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1887:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations] CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */ ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here CDiagContextThreadData::GetProperties(EGetProperties flag) ^~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::DeleteProperty(const string&, ncbi::CDiagContext::EPropertyMode)': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1912:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations] CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */ ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here CDiagContextThreadData::GetProperties(EGetProperties flag) ^~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::PrintProperties()': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:1944:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations] CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */ ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:984:1: note: declared here CDiagContextThreadData::GetProperties(EGetProperties flag) ^~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In function 'bool ncbi::s_GetLogConfigBool(ncbi::CTempString, bool, ncbi::CNcbiRegistry*)': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:3103:16: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] catch (CStringException) { ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In static member function 'static void ncbi::CDiagContext::SetupDiag(ncbi::EAppDiagStream, ncbi::CNcbiRegistry*, ncbi::EDiagCollectMessages, const char*)': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:3244:48: warning: 'virtual bool ncbi::CNcbiApplication::SetupDiag_AppSpecific()' is deprecated [-Wdeprecated-declarations] app->SetupDiag_AppSpecific(); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:48, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:362:34: note: declared here NCBI_DEPRECATED virtual bool SetupDiag_AppSpecific(void); ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'bool ncbi::SDiagMessage::x_ParseExtraArgs(const string&, size_t)': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4235:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] catch (CStringException) { ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4247:16: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] catch (CStringException) { ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'bool ncbi::SDiagMessage::ParseMessage(const string&)': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4334:20: warning: catching polymorphic type 'class ncbi::CTimeException' by value [-Wcatch-value=] catch (CTimeException) { ^~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4520:28: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] catch (CStringException) { ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4606:12: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] catch (CException) { ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp: In member function 'virtual void ncbi::CFileHandleDiagHandler::Reopen(ncbi::CDiagHandler::TReopenFlags)': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:5862:16: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] catch (CException) { ^~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_process.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In instantiation of 'static void ncbi::CStringPairs::Parse(ncbi::CStringPairs::TStrPairs&, ncbi::CTempString, ncbi::CTempString, ncbi::CTempString, ncbi::IStringDecoder*, EOwnership, ncbi::NStr::EMergeDelims) [with TContainer = std::__cxx11::list, std::__cxx11::basic_string > >; ncbi::CStringPairs::TStrPairs = std::__cxx11::list, std::__cxx11::basic_string > >; EOwnership = ENcbiOwnership]': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:3949:9: required from 'void ncbi::CStringPairs::Parse(ncbi::CTempString, ncbi::NStr::EMergeDelims) [with TContainer = std::__cxx11::list, std::__cxx11::basic_string > >]' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp:4233:52: required from here /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:3989:17: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] catch (CStringException) { ^~~~~ trong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbiargs.cpp -o ncbiargs.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbiatomic.cpp -o ncbiatomic.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include ncbicfg.c -o ncbicfg.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidbg.cpp -o ncbidbg.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag.cpp -o ncbidiag.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidiag_p.cpp -o ncbidiag_p.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbidll.cpp -o ncbidll.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbienv.cpp -o ncbienv.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbiexec.cpp -o ncbiexec.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbiexpt.cpp -o ncbiexpt.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbifile.cpp -o ncbifile.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbimempool.cpp -o ncbimempool.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbimtx.cpp -o ncbimtx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbiobj.cpp -o ncbiobj.o //build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbithr.cpp: In static member function 'static bool ncbi::CThread::IsMain()': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbithr.cpp:516:9: warning: variable 'id' set but not used [-Wunused-but-set-variable] TID id = sx_ThreadId; ^~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbitime.cpp: In member function 'bool ncbi::CTime::x_Init(const string&, const ncbi::CTimeFormat&, ncbi::CTime::EErrAction)': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbitime.cpp:696:20: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] catch (CStringException) { ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbitime.cpp:715:20: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] catch (CStringException) { ^~~~~~~~~~~~~~~~ usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbireg.cpp -o ncbireg.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbistr.cpp -o ncbistr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbistre.cpp -o ncbistre.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbithr.cpp -o ncbithr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbitime.cpp -o ncbitime.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/obj_store.cpp -o obj_store.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-b/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/version.cpp:516:12: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] : date(__DATE__ " " __TIME__) ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/version.cpp:516:25: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] : date(__DATE__ " " __TIME__) ^~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/request_ctx.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/request_ctx.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In instantiation of 'static void ncbi::CStringPairs::Parse(ncbi::CStringPairs::TStrPairs&, ncbi::CTempString, ncbi::CTempString, ncbi::CTempString, ncbi::IStringDecoder*, EOwnership, ncbi::NStr::EMergeDelims) [with TContainer = std::map, std::__cxx11::basic_string, ncbi::PNocase_Generic > >; ncbi::CStringPairs::TStrPairs = std::map, std::__cxx11::basic_string, ncbi::PNocase_Generic > >; EOwnership = ENcbiOwnership]': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/request_ctx.cpp:725:43: required from here /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:3989:17: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] catch (CStringException) { ^~~~~ last+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/plugin_manager.cpp -o plugin_manager.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/plugin_manager_store.cpp -o plugin_manager_store.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/rwstreambuf.cpp -o rwstreambuf.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/stream_utils.cpp -o stream_utils.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/syslog.cpp -o syslog.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/version.cpp -o version.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/request_ctx.cpp -o request_ctx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/resource_info.cpp:38: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp: In instantiation of 'static void ncbi::CStringPairs::Parse(ncbi::CStringPairs::TStrPairs&, ncbi::CTempString, ncbi::CTempString, ncbi::CTempString, ncbi::IStringDecoder*, EOwnership, ncbi::NStr::EMergeDelims) [with TContainer = std::multimap, std::__cxx11::basic_string >; ncbi::CStringPairs::TStrPairs = std::multimap, std::__cxx11::basic_string >; EOwnership = ENcbiOwnership]': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:3949:9: required from 'void ncbi::CStringPairs::Parse(ncbi::CTempString, ncbi::NStr::EMergeDelims) [with TContainer = std::multimap, std::__cxx11::basic_string >]' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/resource_info.cpp:326:43: required from here /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:3989:17: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] catch (CStringException) { ^~~~~ SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/request_control.cpp -o request_control.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/expr.cpp -o expr.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_strings.c -o ncbi_strings.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/resource_info.cpp -o resource_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/interprocess_lock.cpp -o interprocess_lock.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_autoinit.cpp -o ncbi_autoinit.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/perf_log.cpp -o perf_log.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/n/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_url.cpp: In member function 'void ncbi::CUrl::SetUrl(const string&, const ncbi::IUrlEncoder*)': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_url.cpp:460:20: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] catch (CStringException) { ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_cookies.cpp: In member function 'bool ncbi::CHttpCookie::Validate() const': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_cookies.cpp:327:12: warning: catching polymorphic type 'class ncbi::CHttpCookieException' by value [-Wcatch-value=] catch (CHttpCookieException) { ^~~~~~~~~~~~~~~~~~~~ cbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_toolkit.cpp -o ncbi_toolkit.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbierror.cpp -o ncbierror.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_url.cpp -o ncbi_url.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_cookies.cpp -o ncbi_cookies.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/guard.cpp -o guard.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/ncbi_message.cpp -o ncbi_message.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/request_status.cpp -o request_status.o /bin/rm -f libxncbi.so .libxncbi.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxncbi.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC ncbi_os_unix.o blob_storage.o ddumpable.o env_reg.o metareg.o ncbi_config.o ncbi_param.o ncbi_process.o ncbi_safe_static.o ncbi_signal.o ncbi_stack.o ncbi_system.o ncbiapp.o ncbiargs.o ncbiatomic.o ncbicfg.o ncbidbg.o ncbidiag.o ncbidiag_p.o ncbidll.o ncbienv.o ncbiexec.o ncbiexpt.o ncbifile.o ncbimempool.o ncbimtx.o ncbiobj.o ncbireg.o ncbistr.o ncbistre.o ncbithr.o ncbitime.o obj_store.o plugin_manager.o plugin_manager_store.o rwstreambuf.o stream_utils.o syslog.o version.o request_ctx.o request_control.o expr.o ncbi_strings.o resource_info.o interprocess_lock.o ncbi_autoinit.o perf_log.o ncbi_toolkit.o ncbierror.o ncbi_url.o ncbi_cookies.o guard.o ncbi_message.o request_status.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ldl -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxncbi.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxncbi.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxncbi.so /bin/ln -f .xncbi.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xncbi.dep make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib TMPL=test_mt -w all make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/test_mt.cpp -o test_mt.o /bin/rm -f libtest_mt.so .libtest_mt.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libtest_mt.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC test_mt.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_mt.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libtest_mt.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libtest_mt.so /bin/ln -f .test_mt.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.test_mt.dep make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib TMPL=test_boost -w all make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/test_boost.cpp -o test_boost.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/corelib/teamcity_messages.cpp -o teamcity_messages.o /bin/rm -f libtest_boost.so .libtest_boost.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libtest_boost.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC test_boost.o teamcity_messages.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_boost.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libtest_boost.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libtest_boost.so /bin/ln -f .test_boost.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.test_boost.dep make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[3]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[2]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[2]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' /usr/bin/make[2] (Makefile.util.lib): Nothing to be done for `export-headers'. /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util TMPL=util -w all make[3]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/random_gen.cpp -o random_gen.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/utf8.cpp -o utf8.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/checksum.cpp -o checksum.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/bytesrc.cpp -o bytesrc.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/strbuffer.cpp -o strbuffer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/itree.cpp -o itree.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/nIn file included from /usr/include/string.h:494, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/util/format_guess.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/format_guess.cpp:33: In function 'char* strncpy(char*, const char*, size_t)', inlined from 'bool ncbi::CFormatGuess::TestFormatNewick(ncbi::CFormatGuess::EMode)' at /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/format_guess.cpp:1008:24: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, long unsigned int)' accessing 12 bytes at offsets 0 and [0, 16397] may overlap up to 12 bytes at offset 11 [-Wrestrict] return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/smalldns.cpp -o smalldns.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/thread_pool_old.cpp -o thread_pool_old.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/ddump_viewer.cpp -o ddump_viewer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/strsearch.cpp -o strsearch.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/logrotate.cpp -o logrotate.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/format_guess.cpp -o format_guess.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/ascii85.cpp -o ascii85.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp: In static member function 'static void ncbi::CDictionaryUtil::Stem(const string&, std::__cxx11::string*)': /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [5]' [-Warray-bounds] const char* end2 = p - 1; ^~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [4]' [-Warray-bounds] const char* end2 = p - 1; ^~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [4]' [-Warray-bounds] const char* end2 = p - 1; ^~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [4]' [-Warray-bounds] const char* end2 = p - 1; ^~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [6]' [-Warray-bounds] const char* end2 = p - 1; ^~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [6]' [-Warray-bounds] const char* end2 = p - 1; ^~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [8]' [-Warray-bounds] const char* end2 = p - 1; ^~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [5]' [-Warray-bounds] const char* end2 = p - 1; ^~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp:709:17: warning: array subscript -1 is below array bounds of 'const char [8]' [-Warray-bounds] const char* end2 = p - 1; ^~~~ =64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/md5.cpp -o md5.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/file_obsolete.cpp -o file_obsolete.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/unicode.cpp -o unicode.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/dictionary.cpp -o dictionary.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/dictionary_util.cpp -o dictionary_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/thread_nonstop.cpp -o thread_nonstop.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/sgml_entity.cpp -o sgml_entity.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/static_set.cpp -o static_set.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/transmissionrw.cpp -o transmissionrw.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/miscmath.c -o miscmath.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/mutex_pool.cpp -o mutex_pool.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/ncbi_cache.cpp -o ncbi_cache.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/line_reader.cpp -o line_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/util_exception.cpp -o util_exception.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/uttp.cpp -o uttp.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/multi_writer.cpp -o multi_writer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/itransaction.cpp -o itransaction.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/thread_pool.cpp -o thread_pool.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/thread_pool_ctrl.cpp -o thread_pool_ctrl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/scheduler.cpp -o scheduler.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/distribution.cpp -o distribution.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/rangelist.cpp -o rangelist.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/util_misc.cpp -o util_misc.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/histogram_binning.cpp -o histogram_binning.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs 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retry_ctx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/stream_source.cpp -o stream_source.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/file_manifest.cpp -o file_manifest.o /bin/rm -f libxutil.so .libxutil.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxutil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC random_gen.o utf8.o checksum.o bytesrc.o strbuffer.o itree.o smalldns.o thread_pool_old.o ddump_viewer.o strsearch.o logrotate.o format_guess.o ascii85.o md5.o file_obsolete.o unicode.o dictionary.o dictionary_util.o thread_nonstop.o sgml_entity.o static_set.o transmissionrw.o miscmath.o mutex_pool.o ncbi_cache.o line_reader.o util_exception.o uttp.o multi_writer.o itransaction.o thread_pool.o thread_pool_ctrl.o scheduler.o distribution.o rangelist.o util_misc.o histogram_binning.o table_printer.o retry_ctx.o stream_source.o file_manifest.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxutil.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxutil.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxutil.so /bin/ln -f .xutil.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xutil.dep make[3]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' make[2]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' make[2]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp' NOTE: Skipping project regexp due to unmet requirements: LocalPCRE make[3]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/regexp TMPL=regexp -w mark-as-disabled make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp' make[3]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp' make[2]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp' make[2]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[3]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' /usr/bin/make[3] (Makefile.xregexp.lib): Nothing to be done for `export-headers'. /usr/bin/make[3] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'. /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/xregexp TMPL=xregexp -w all make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/xregexp/regexp.cpp -o regexp.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/xregexp/arg_regexp.cpp -o arg_regexp.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/xregexp/mask_regexp.cpp -o mask_regexp.o /bin/rm -f libxregexp.so .libxregexp.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxregexp.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC regexp.o arg_regexp.o mask_regexp.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -lpcre /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxregexp.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxregexp.so /bin/ln -f .xregexp.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xregexp.dep make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/xregexp TMPL=xregexp_template_tester -w all make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/xregexp/regexp_template_tester.cpp -o regexp_template_tester.o /bin/rm -f libxregexp_template_tester.so .libxregexp_template_tester.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxregexp_template_tester.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC regexp_template_tester.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxregexp -lxncbi -lpcre /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp_template_tester.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxregexp_template_tester.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxregexp_template_tester.so /bin/ln -f .xregexp_template_tester.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xregexp_template_tester.dep make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[3]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[2]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[2]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder TMPL=project_tree_builder -w all make[3]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/file_contents.cpp -o file_contents.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure.cpp -o msvc_configure.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_makefile.cpp -o msvc_makefile.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_masterproject_generator.cpp -o msvc_masterproject_generator.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_generator.cpp -o msvc_prj_generator.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_utils.cpp -o msvc_prj_utils.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_project_context.cpp -o msvc_project_context.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_site.cpp -o msvc_site.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_sln_generator.cpp -o msvc_sln_generator.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_builder_app.cpp -o proj_builder_app.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.cpp -o proj_datatool_generated_src.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_item.cpp -o proj_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree.cpp -o proj_tree.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_tree_builder.cpp -o proj_tree_builder.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_src_resolver.cpp -o proj_src_resolver.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_utils.cpp -o proj_utils.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/resolver.cpp -o resolver.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_configure_prj_generator.cpp -o msvc_configure_prj_generator.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/proj_projects.cpp -o proj_projects.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_dlls_info.cpp -o msvc_dlls_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.cpp -o msvc_prj_files_collector.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/configurable_file.cpp -o configurable_file.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_gui.cpp -o ptb_gui.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/ptb_registry.cpp -o ptb_registry.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/mac_prj_generator.cpp -o mac_prj_generator.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/prj_file_collector.cpp -o prj_file_collector.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie file_contents.o msvc_configure.o msvc_makefile.o msvc_masterproject_generator.o msvc_prj_generator.o msvc_prj_utils.o msvc_project_context.o msvc_site.o msvc_sln_generator.o proj_builder_app.o proj_datatool_generated_src.o proj_item.o proj_tree.o proj_tree_builder.o proj_src_resolver.o proj_utils.o resolver.o msvc_configure_prj_generator.o proj_projects.o msvc_dlls_info.o msvc_prj_files_collector.o configurable_file.o ptb_gui.o ptb_registry.o mac_prj_generator.o prj_file_collector.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxutil -lxncbi -lxregexp -lpcre -ldl -lm -lpthread -o project_tree_builder /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f project_tree_builder /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f project_tree_builder /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/project_tree_builder make[3]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder' make[2]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder' ********************************************************************** Running project_tree_builder. Please wait. ********************************************************************** ./build-system/project_tree_builder/project_tree_builder -dll -dtdep -conffile /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder.ini -logfile Flat.configuration_log /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ src Makefile.flat Done =============================================================================== NCBI C++ Toolkit documentation: Online: http://www.ncbi.nlm.nih.gov/toolkit/doc/book/ Local: ./doc/public/index.html For the available configuration flags run: ./configure --help CFLAGS = -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC CXXFLAGS = -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC CPPFLAGS = -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE LDFLAGS = -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O LIBRARIES: build as dynamic by default FEATURES: GCC MT LFS DLL DLL_BUILD unix WinMain Linux PACKAGES: enabled: Iconv Z BZ2 PCRE MBEDTLS GMP GMP NETTLE NETTLE GNUTLS Boost.Spirit Boost.Test.Included LMDB LocalLMDB disabled: UUID FUSE LIBUNWIND LocalZ LocalBZ2 LZO LocalPCRE GCRYPT OPENSSL KRB5 CURL Sybase DBLib FreeTDS MySQL BerkeleyDB BerkeleyDB++ ODBC PYTHON PYTHON25 PYTHON26 PYTHON27 PYTHON3 PERL Boost.Filesystem Boost.Iostreams Boost.Program-Options Boost.Regex Boost.System Boost.Test Boost.Thread C-Toolkit OpenGL MESA GLUT GLEW wxWidgets wx2.8 Fast-CGI LocalSSS LocalMSGMAIL2 SSSUTILS LocalNCBILS NCBILS2 SSSDB SP ORBacus ICU EXPAT SABLOT LIBXML LIBXSLT LIBEXSLT Xerces Xalan Zorba SQLITE3 SQLITE3ASYNC VDB OECHEM SGE MUPARSER HDF5 JPEG PNG TIFF GIF UNGIF XPM FreeType FTGL MAGIC MIMETIC GSOAP AVRO Cereal SASL2 MONGODB MONGODB3 GMOCK LAPACK LIBUV LIBSSH2 CASSANDRA LIBXLSXWRITER GRPC PROJECTS: enabled: cgi serial objects app algo disabled: local_lbsm connext ncbi_crypt bdb dbapi ctools gui gbench Tools / flags / paths: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.mk Configuration header: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc/ncbiconf_unix.h To build everything: cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build && /usr/bin/make all_r or simply run /usr/bin/make in the current directory Alternatively, cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build && /usr/bin/make -f Makefile.flat ******* CONFIGURATION SUCCESSFUL ******* make[1]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' cd c++/BUILD/build && \ make -j4 -f Makefile.flat all_projects="algo/blast/ app/ objmgr/ objtools/align_format/ objtools/blast/" make[2]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build' /usr/bin/make -w -j4 --jobserver-auth=3,4 -f Makefile.flat ptb_all.real MTARGET= make[3]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build' make[3]: warning: -j4 forced in submake: resetting jobserver mode. cd corelib/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources cd util/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources cd serial/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' cd serial/datatool/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool' cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment' /usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' cd util/tables/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment' /usr/bin/make[4] (Makefile.serial.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment' cd connect/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.cserial.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables' cd algo/blast/core/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' /usr/bin/make[4] (Makefile.connssl.lib): Nothing to be done for `export-headers'. /usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' /usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.connect.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' cd util/sequtil/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' cd objtools/blast/services/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil' /usr/bin/make[4] (Makefile.xxconnect.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' /usr/bin/make[4] (Makefile.sequtil.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.blast_services.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' cd util/creaders/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources cd objmgr/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' /usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.creaders.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: warning: -j4 forced in submake: resetting jobserver mode. cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources /usr/bin/make[4] (Makefile.objmgr.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr' cd objtools/readers/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.xthrserv.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' /usr/bin/make[4] (Makefile.seqdb.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader' cd objmgr/util/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.xobjread.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.xobjreadex.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util' /usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util' cd objtools/seqmasks_io/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io' cd algo/blast/dbindex/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' cd algo/dustmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.xalgoblastdbindex.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.seqmasks_io.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex' cd algo/winmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources cd objtools/alnmgr/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' cd algo/blast/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.xalgodustmask.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask' cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr' /usr/bin/make[4] (Makefile.xalgowinmask.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask' cd util/compress/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.alnmgr.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr' cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' /usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api' /usr/bin/make[4] (Makefile.gene_info.lib): Nothing to be done for `export-headers'. cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader' cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.xblast.lib): Nothing to be done for `export-headers'. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.ncbi_xreader.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api' cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.ncbi_xloader_genbank.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.ncbi_xreader_id1.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2' cd cgi/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.ncbi_xreader_cache.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache' cd html/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/html' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.ncbi_xreader_id2.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2' cd objtools/align_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/html' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/html' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/html' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/html' /usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/html' cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.align_format.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format' cd algo/blast/blastinput/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format' /usr/bin/make[4] (Makefile.fcgi.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/make[4] (Makefile.blastdb_format.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format' cd algo/blast/proteinkmer/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer' /usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput' cd util/xregexp/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.ncbi_xloader_blastdb_rmt.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.proteinkmer.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer' cd objtools/cleanup/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup' make[5]: warning: -j4 forced in submake: resetting jobserver mode. cd objtools/format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources /usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format' cd algo/blast/format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources /usr/bin/make[4] (Makefile.cleanup.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup' cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format' /usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'. make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test' cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format' /usr/bin/make[4] (Makefile.xformat.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. cd algo/blast/igblast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex' cd objtools/simple/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.xblastformat.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format' cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.igblast.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast' cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources /usr/bin/make[4] (Makefile.xobjsimple.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple' cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format' cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.blast_unit_test_util.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.writedb.lib): Nothing to be done for `export-headers'. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer' cd app/dustmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.seqalign_util.lib): Nothing to be done for `export-headers'. make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker' cd algo/segmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/Makefile.legacy_blast builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast -w -j4 --jobserver-auth=9,10 all /usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask' cd app/segmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker' cd app/winmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/legacy_blast.pl /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/legacy_blast.pl /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/legacy_blast.pl make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/Makefile.update_blastdb builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast -w -j4 --jobserver-auth=9,10 all make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' cd objmgr/split/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[6]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/winmasker -w -j4 --jobserver-auth=9,10 all make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split' /usr/bin/make[4] (Makefile.id2_split.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split' cd objtools/align_format/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/update_blastdb.pl /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/update_blastdb.pl /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/update_blastdb.pl make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/windowmasker_2.2.22_adapter.py make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test' cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo' cd objtools/blast/seqdb_reader/demo/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' cd objtools/blast/seqdb_reader/test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo' cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources /usr/bin/make[4] (Makefile.blast_app_util.lib): Nothing to be done for `export-headers'. make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test' cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' cd corelib/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test' cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=composition_adjustment UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment' /usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `all'. /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j4 --jobserver-auth=7,8 all make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' cd util/tables/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=tables UNIX_PROJ="" sources= configurables=configurables.null make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/compo_heap.c:137:1: warning: ‘s_CompoHeapIsValid’ defined but not used [-Wunused-function] s_CompoHeapIsValid(BlastCompo_HeapRecord * heapArray, int i, int n) ^~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/tables TMPL=tables -w -j4 --jobserver-auth=7,8 all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/compo_heap.c -o compo_heap.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/compo_mode_condition.c -o compo_mode_condition.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/composition_adjustment.c -o composition_adjustment.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/matrix_frequency_data.c -o matrix_frequency_data.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/nlm_linear_algebra.c -o nlm_linear_algebra.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/bmake[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/redo_alignment.c:200:1: warning: ‘s_DistinctAlignmentsLength’ defined but not used [-Wunused-function] s_DistinctAlignmentsLength(BlastCompo_Alignment * list) ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/redo_alignment.c:185:1: warning: ‘s_AlignmentsAreSorted’ defined but not used [-Wunused-function] s_AlignmentsAreSorted(BlastCompo_Alignment * alignments) ^~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o /bin/rm -f libtables.so .libtables.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libtables.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC raw_scoremat.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libtables.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libtables.so /bin/ln -f .tables.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.tables.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' cd connect/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables' cd util/sequtil/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect TMPL=xconnect -w -j4 --jobserver-auth=7,8 all /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnect to make__connect_common per /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/.#lock-map. /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/sequtil TMPL=sequtil -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' /bin/mkdir -p mbedtls /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbsmd_stub.c -o ncbi_lbsmd_stub.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ansi_ext.c -o ncbi_ansi_ext.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_types.c -o ncbi_types.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.c -o ncbi_priv.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_core.c -o ncbi_core.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -sIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_util.c:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_util.c: In function ‘CORE_SetLOGFILE_NAME_Ex’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_util.c:150:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(1, eLOG_Error, errno, ^~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:76: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of ‘int’ [-Wpedantic] eNcbiCred_MbedTls = 0xC12CC16C ^~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:77: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_DoLog’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:508:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(112, level, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro ‘DO_CORE_LOG_DATA’ DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:548:13: note: in expansion of macro ‘CORE_DATAF_X’ CORE_DATAF_X(109, level, data, size, ^~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:581:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(113, level, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:589:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(1, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_InitAPI_’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:872:13: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "Secure socket layer (SSL) has not" ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_gethostname’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1027:13: note: in expansion of macro ‘CORE_LOG_ERRNO_EXX’ CORE_LOG_ERRNO_EXX(103, eLOG_Error, ^~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1036:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(104, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_gethostbyname_’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1169:17: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(106, eLOG_Warning, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_getlocalhostaddress’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1208:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(9, reget == eDefault ? eLOG_Warning : eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_gethostbyname’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1234:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(155, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_gethostbyaddr_’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1365:17: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(108, eLOG_Warning, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_gethostbyaddr’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1399:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(10, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘x_TryLowerSockFileno’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1523:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(111, eLOG_Trace, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_Select_’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1648:21: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(145, eLOG_Error, errno, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1777:17: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(5, eLOG_Warning, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_Poll_’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:1921:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(146, eLOG_Critical, errno, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2066:17: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(147, ready ? eLOG_Warning : eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_IsConnected_’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2640:13: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Trace, ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2650:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(6, eLOG_Trace, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2685:25: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Trace, ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_Recv’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:2836:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(7, eLOG_Trace, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_Read_’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3017:17: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(8, eLOG_Error, errno, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_Send’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3368:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(11, eLOG_Trace, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_WritePending’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3520:17: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(12, sock->log != eOff ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_Shutdown’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3692:21: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(13, !tv || (tv->tv_sec | tv->tv_usec) ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3729:25: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(127, eLOG_Trace, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3778:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(16, eLOG_Trace, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_Close_’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3842:17: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(17, eLOG_Trace, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3858:21: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(18, eLOG_Trace, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3888:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(19, eLOG_Trace, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:3947:17: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(21, abort == 1 ? eLOG_Warning : eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_Connect_’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4064:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(131, eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4083:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(142, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4107:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(22, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4138:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(23, eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4204:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(151, eLOG_Warning, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4215:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(135, eLOG_Warning, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4278:17: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(25, sock->log != eOff ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4322:17: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(26, sock->log != eOff ^~~~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of ‘int’ [-Wpedantic] eNcbiCred_MbedTls = 0xC12CC16C ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_Create’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4408:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(27, eLOG_Error, errno, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_CreateOnTop’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4461:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(47, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4484:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(148, eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4522:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(48, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4563:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(50, eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4577:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(49, eLOG_Error, errno, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4640:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(132, eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4663:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(153, eLOG_Warning, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4674:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(138, eLOG_Warning, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4694:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(124, eLOG_Warning, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4709:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(43, eLOG_Warning, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_CreateListening’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4762:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(144, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4806:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(34, eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4852:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(35, eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4907:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(36, error != SOCK_EADDRINUSE ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4928:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(150, eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:4998:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(37, eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5065:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(115, eLOG_Note, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_Accept’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5112:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(39, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5168:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(40, eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5227:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(41, eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5286:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(42, eLOG_Warning, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5297:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(152, eLOG_Warning, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5308:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(137, eLOG_Warning, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5328:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(128, eLOG_Warning, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_CloseListening’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5373:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(44, eLOG_Note, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5402:17: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(45, eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_RecvMsg’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5490:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(20, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5538:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(94, eLOG_Trace, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘s_SendMsg’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5573:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(154, eLOG_Error, errno, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5589:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(88, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5598:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(89, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5648:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(90, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5694:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(91, eLOG_Trace, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘TRIGGER_Create’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5737:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(28, eLOG_Error, errno, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5747:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(143, eLOG_Warning, errno, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5759:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(29, eLOG_Error, errno, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5769:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(30, eLOG_Warning, errno, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5788:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(116, eLOG_Note, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘TRIGGER_Close’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:5850:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(117, eLOG_Note, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘LSOCK_GetOSHandleEx’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6061:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(46, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘SOCK_Reconnect’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6249:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(52, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6259:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(53, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6271:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(51, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘SOCK_Shutdown’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6301:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(54, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6308:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(55, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6316:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(15, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘SOCK_Wait’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6446:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(56, eLOG_Error, ^~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c: In function ‘ConnNetInfo_Log’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:115:54: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ LOG_Write(lg, code, subcode, level, THIS_MODULE, CORE_CURRENT_FUNCTION, \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1412:9: note: in expansion of macro ‘LOG_WRITE’ LOG_WRITE(lg, NCBI_C_ERRCODE_X, 11, ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6474:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(57, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6488:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(58, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6502:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(59, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6511:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(60, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c: In function ‘URL_ConnectEx’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1637:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(2, eLOG_Critical, "[URL_Connect] Bad argument(s)"); ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1654:9: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Critical, ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1686:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(3, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1702:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(4, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1753:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(5, eLOG_Error, x_errno, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1770:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(6, eLOG_Error, x_errno, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1814:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(7, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c: In function ‘URL_Connect’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1847:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(9, eLOG_Error, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c:1887:17: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(8, eLOG_Error, errno, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6521:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(61, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6531:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(62, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘SOCK_SetTimeout’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6668:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(63, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘SOCK_GetTimeout’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6709:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(64, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘SOCK_Read’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6751:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(65, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6761:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(66, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘SOCK_ReadLine’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6792:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(125, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘SOCK_Pushback’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6868:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(67, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘SOCK_Write’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6920:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(68, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6947:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(69, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6957:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(70, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘SOCK_Abort’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6976:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(71, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:6983:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(72, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘SOCK_GetOSHandleEx’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7133:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(73, eLOG_Error, ^~~~~~~~~~~ last/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o /bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libcomposition_adjustment.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libcomposition_adjustment.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libcomposition_adjustment.so /bin/ln -f .composition_adjustment.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.composition_adjustment.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘SOCK_SetCork’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7196:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(158, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7203:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(159, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7216:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(160, eLOG_Warning, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘SOCK_DisableOSSendDelay’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7233:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(156, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7240:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(157, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7253:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(75, eLOG_Warning, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘DSOCK_CreateEx’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7305:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(76, eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘DSOCK_Bind’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7426:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(79, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7433:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(78, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7451:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(80, error != SOCK_EADDRINUSE ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7467:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(114, eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘DSOCK_Connect’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7496:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(82, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7503:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(81, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7522:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(83, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7535:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(84, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7564:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(85, eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘DSOCK_WaitMsg’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7592:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(96, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7599:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(95, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘DSOCK_RecvMsg’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7638:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(93, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7645:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(92, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘DSOCK_SendMsg’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7682:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(87, eLOG_Error, ^~~~~~~~~~~ make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment' cd util/creaders/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=creaders UNIX_PROJ="" sources= configurables=configurables.null /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7689:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(86, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘DSOCK_WipeMsg’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7721:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(98, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7728:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(97, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7748:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(99, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘DSOCK_SetBroadcast’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7766:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(101, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7773:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(100, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7793:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(102, eLOG_Error, ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘SOCK_SetReuseAddress’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:7955:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_EXX’ CORE_LOGF_ERRNO_EXX(74, eLOG_Warning, ^~~~~~~~~~~~~~~~~~~ make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c: In function ‘SOCK_SetupSSLInternal’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c:8339:13: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "Cannot reset SSL while it is in use"); ^~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘x_ReInit’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro ‘CONN_LOG_EX’ #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:273:13: note: in expansion of macro ‘CONN_LOG’ CONN_LOG(4, ReInit, eLOG_Critical, "Partial re-init not allowed"); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro ‘CONN_LOG_EX’ #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:303:21: note: in expansion of macro ‘CONN_LOG’ CONN_LOG(3, Close, ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro ‘CONN_LOG_EX’ #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:307:21: note: in expansion of macro ‘CONN_LOG’ CONN_LOG(3, ReInit, eLOG_Error, ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘s_Open’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro ‘CONN_LOG_EX’ #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:384:9: note: in expansion of macro ‘CONN_LOG’ CONN_LOG(5, Open, eLOG_Error, "Failed to open connection"); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_CreateEx’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro ‘CONN_LOG_EX’ #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:426:9: note: in expansion of macro ‘CONN_LOG’ CONN_LOG(2, Create, eLOG_Error, "NULL connector"); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_ReInit’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:448:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(1, ReInit); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:448:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(1, ReInit); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_GetType’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:456:5: note: in expansion of macro ‘CONN_NOT_NULL_EX’ CONN_NOT_NULL_EX(6, GetType, 0); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:456:5: note: in expansion of macro ‘CONN_NOT_NULL_EX’ CONN_NOT_NULL_EX(6, GetType, 0); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_Description’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:465:5: note: in expansion of macro ‘CONN_NOT_NULL_EX’ CONN_NOT_NULL_EX(7, Description, 0); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:465:5: note: in expansion of macro ‘CONN_NOT_NULL_EX’ CONN_NOT_NULL_EX(7, Description, 0); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_GetPosition’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:477:5: note: in expansion of macro ‘CONN_NOT_NULL_EX’ CONN_NOT_NULL_EX(30, GetPosition, 0); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:477:5: note: in expansion of macro ‘CONN_NOT_NULL_EX’ CONN_NOT_NULL_EX(30, GetPosition, 0); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:490:9: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(31, GetPosition, eLOG_Error, errbuf, 0); ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_SetTimeout’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:506:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(8, SetTimeout); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:506:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(8, SetTimeout); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:546:9: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(9, SetTimeout, eLOG_Error, errbuf, eIO_InvalidArg); ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_GetTimeout’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:561:5: note: in expansion of macro ‘CONN_NOT_NULL_EX’ CONN_NOT_NULL_EX(10, GetTimeout, 0); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:561:5: note: in expansion of macro ‘CONN_NOT_NULL_EX’ CONN_NOT_NULL_EX(10, GetTimeout, 0); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:569:9: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(11, GetTimeout, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:584:9: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(12, GetTimeout, eLOG_Error, errbuf, 0); ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_Wait’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:600:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(13, Wait); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:600:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(13, Wait); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro ‘CONN_LOG_EX’ #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:644:9: note: in expansion of macro ‘CONN_LOG’ CONN_LOG(event != eIO_Read ? 15 : 14, Wait, level, ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘s_CONN_Write’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro ‘CONN_LOG_EX’ #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:665:9: note: in expansion of macro ‘CONN_LOG’ CONN_LOG(16, Write, eLOG_Critical, "Cannot write data"); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro ‘CONN_LOG_EX’ #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:707:13: note: in expansion of macro ‘CONN_LOG’ CONN_LOG(17, Write, level, "Unable to write data"); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_Write’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:749:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(18, Write); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:749:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(18, Write); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_Pushback’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:784:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(19, Pushback); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:784:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(19, Pushback); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_Flush’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:804:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(20, Flush); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:804:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(20, Flush); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro ‘CONN_LOG_EX’ #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:819:9: note: in expansion of macro ‘CONN_LOG’ CONN_LOG(21, Flush, eLOG_Warning, "Failed to flush"); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘s_CONN_Read’: make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro ‘CONN_LOG_EX’ #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:844:9: note: in expansion of macro ‘CONN_LOG’ CONN_LOG(22, Read, eLOG_Critical, "Cannot read data"); ^~~~~~~~ make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:885:17: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(32, Read, eLOG_Critical, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro ‘CONN_LOG_EX’ #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:911:13: note: in expansion of macro ‘CONN_LOG’ CONN_LOG(23, Read, level, "Unable to read data"); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_Read’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:962:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(24, Read); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:962:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(24, Read); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_ReadLine’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1011:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(25, ReadLine); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1011:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(25, ReadLine); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1059:17: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(35, ReadLine, eLOG_Critical, ^~~~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_Status’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1078:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(26, Status); ^~~~~~~~~~~~~ make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1078:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(26, Status); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_Close’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1117:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(27, Close); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1117:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(27, Close); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_SetCallback’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1137:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(28, SetCallback); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1137:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(28, SetCallback); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1143:9: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(29, SetCallback, eLOG_Error, errbuf, eIO_InvalidArg); ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c: In function ‘CONN_GetSOCK’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1164:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(36, GetSOCK); ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro ‘CONN_LOG_EX’ CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro ‘CONN_NOT_NULL_EX’ #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c:1164:5: note: in expansion of macro ‘CONN_NOT_NULL’ CONN_NOT_NULL(36, GetSOCK); ^~~~~~~~~~~~~ /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/creaders TMPL=creaders -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c: In function ‘METACONN_Remove’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:63:13: note: in expansion of macro ‘METACONN_LOG’ METACONN_LOG(34, eLOG_Error, ^~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c: In function ‘METACONN_Insert’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c:92:9: note: in expansion of macro ‘METACONN_LOG’ METACONN_LOG(33, eLOG_Error, ^~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_connector.c:38: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_connector.c: In function ‘s_VT_Open’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_connector.c:171:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(163, eLOG_Error, ^~~~~~~~~~~ pecs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_util.c -o ncbi_util.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket.c -o ncbi_socket.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connection.c -o ncbi_connection.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connector.c -o ncbi_connector.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:38: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function ‘s_Adjust’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:368:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(2, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:383:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(17, eLOG_Trace, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:409:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(3, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:424:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(18, eLOG_Trace, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:434:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(4, eLOG_Critical, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:458:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(1, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function ‘s_Connect’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:561:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(5, eLOG_Critical, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:701:25: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(20, eLOG_Error, error, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function ‘s_ConnectAndSend’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:912:9: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(6, eLOG_Error, error, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function ‘x_ReadChunkHead’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1043:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(23, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function ‘s_ReadData’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1114:17: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(24, eLOG_Error, error, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1138:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(25, eLOG_Error, error, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function ‘s_ReadHeader’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1212:17: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(7, eLOG_Error, error, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1249:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(8, level, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro ‘DO_CORE_LOG_DATA’ DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1313:9: note: in expansion of macro ‘CORE_DATAF_X’ CORE_DATAF_X(9, fatal ? eLOG_Error : eLOG_Note, hdr, size, ^~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1330:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(22, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro ‘DO_CORE_LOG_DATA’ DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1349:17: note: in expansion of macro ‘CORE_DATAF_X’ CORE_DATAF_X(9, eLOG_Note, hdr, size, ^~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1399:25: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(10, eLOG_Critical, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1557:21: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Warning, ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1575:13: note: in expansion of macro ‘CORE_LOGF_ERRNO_X’ CORE_LOGF_ERRNO_X(11, eLOG_Error, error, ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1630:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(19, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1635:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(12, err && !(uuu->flags & fHTTP_SuppressMessages) ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1646:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(13, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro ‘DO_CORE_LOG_DATA’ DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1654:17: note: in expansion of macro ‘CORE_DATAF_X’ CORE_DATAF_X(14, eLOG_Note, s, n, ^~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1663:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(15, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function ‘s_Read’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1834:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(16, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:1877:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(21, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c: In function ‘s_VT_Write’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c:2116:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(24, eLOG_Error, ^~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:115: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function ‘HEAP_Create’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:269:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(1, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:290:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(2, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function ‘HEAP_AttachFast’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:314:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(3, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:323:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(4, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function ‘HEAP_Attach’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:354:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(34, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:337:68: warning: variable ‘p’ set but not used [-Wunused-but-set-variable] const SHEAP_HeapBlock* b = (const SHEAP_HeapBlock*) base, *p = 0; ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:115: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function ‘s_HEAP_Find’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:451:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(8, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function ‘HEAP_Alloc’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:658:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(6, eLOG_Warning, "Heap Alloc: NULL heap"); ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:664:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(7, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:711:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(9, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function ‘HEAP_Free’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:833:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(10, eLOG_Warning, "Heap Free: NULL heap"); ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:839:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(11, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:852:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(13, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:860:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(12, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:872:5: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(14, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function ‘HEAP_FreeFast’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:884:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(15, eLOG_Warning, "Heap Free: NULL heap"); ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:890:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(16, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:904:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(17, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:915:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(18, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:922:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(19, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function ‘HEAP_Trim’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:944:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(30, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:979:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(31, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1006:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(32, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function ‘s_HEAP_Walk’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1028:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(28, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1042:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(26, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1045:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(27, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1057:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(23, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1144:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(21, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1159:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(20, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1177:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(22, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1188:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(24, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function ‘HEAP_Walk’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1204:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(29, eLOG_Warning, "Heap Walk: NULL heap"); ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c: In function ‘HEAP_Destroy’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c:1306:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(33, eLOG_Error, ^~~~~~~~~~~ In file included from /usr/include/string.h:494, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/creaders/alnread.c:35: In function ‘strcpy’, inlined from ‘s_RemoveBasePairCountCommentsFromData’ at /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/creaders/alnread.c:4418:25, inlined from ‘s_ProcessAlignFileRawForMarkedIDs’ at /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/creaders/alnread.c:4452:5, inlined from ‘ReadAlignmentFileEx2’ at /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/creaders/alnread.c:6116:9: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:90:10: warning: ‘__builtin_strcpy’ accessing 1 byte at offsets 0 and [0, 9223372036854775807] may overlap 1 byte at offset 0 [-Wrestrict] return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ TRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_heapmgr.c -o ncbi_heapmgr.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c -o ncbi_service.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_host_infoIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c:41: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c: In function ‘x_ServiceName’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c:85:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(7, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c:94:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(8, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c: In function ‘x_Open’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service.c:336:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(1, eLOG_Error, ^~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_dispd.c:38: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_dispd.c: In function ‘s_Resolve’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_dispd.c:198:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(5, eLOG_Error, ^~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c: In function ‘s_OpenDispatcher’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:105:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(5, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c: In function ‘s_ParseHeader’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:180:49: warning: format ‘%n’ expects argument of type ‘int *’, but argument 7 has type ‘unsigned int *’ [-Wformat=] if (sscanf(header, "%u.%u.%u.%u%n", &i1, &i2, &i3, &i4, &n) < 4 ~^ ~~ %n /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:181:51: warning: format ‘%n’ expects argument of type ‘int *’, but argument 5 has type ‘unsigned int *’ [-Wformat=] || sscanf(header + n, "%hu%x%n", &uuu->port, &tkt, &m) < 2 ~^ ~~ %n In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c: In function ‘s_Open’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:890:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(4, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:916:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(9, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c: In function ‘s_VT_Open’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:1048:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(10, eLOG_Critical, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:1126:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(6, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c:1138:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(11, eLOG_Error, ^~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c: In function ‘s_SendRcpt’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:417:13: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(3, "Recipient address is too long"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:420:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(1, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:428:13: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(4, write_error); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:432:13: note: in expansion of macro ‘SENDMAIL_RETURN2’ SENDMAIL_RETURN2(5, proto_error, buf); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c: In function ‘CORE_SendMailEx’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:487:9: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(6, "SSendMailInfo inited improperly: invalid magic"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:492:9: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(7, "At least one message recipient must be specified"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:502:9: note: in expansion of macro ‘SENDMAIL_RETURN2’ SENDMAIL_RETURN2(8, "Cannot connect to sendmail", buffer); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:509:9: note: in expansion of macro ‘SENDMAIL_RETURN2’ SENDMAIL_RETURN2(9, "Protocol error in connection init", buffer); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:514:9: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(10, "Unable to get local host name"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:519:9: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(11, "Write error in HELO command"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:522:9: note: in expansion of macro ‘SENDMAIL_RETURN2’ SENDMAIL_RETURN2(12, "Protocol error in HELO command", buffer); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:527:9: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(13, "Write error in MAIL command"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:530:9: note: in expansion of macro ‘SENDMAIL_RETURN2’ SENDMAIL_RETURN2(14, "Protocol error in MAIL command", buffer); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:551:9: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(15, "Write error in DATA command"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:553:9: note: in expansion of macro ‘SENDMAIL_RETURN2’ SENDMAIL_RETURN2(16, "Protocol error in DATA command", buffer); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:584:21: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(32, "Write error in sending Date"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:591:21: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(33, "Write error in sending From"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:599:17: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(17, "Write error in sending Subject"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:606:17: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(18, "Write error in sending To"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:613:17: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(19, "Write error in sending Cc"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:617:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(2, eLOG_Warning, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:628:9: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(20, "Write error in sending mailer information"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:656:17: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(21, "Write error while sending custom header"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:665:13: note: in expansion of macro ‘SENDMAIL_RETURN2’ SENDMAIL_RETURN2(22, error, buffer); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:668:13: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(23, "Write error in finalizing custom header"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:677:17: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(24, "Write error in message body delimiter"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:703:17: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(25, "Write error while sending message body"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:712:13: note: in expansion of macro ‘SENDMAIL_RETURN2’ SENDMAIL_RETURN2(26, error, buffer); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:716:13: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(27, "Write error while finalizing message body"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:719:9: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(28, "Write error while finalizing message"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:724:9: note: in expansion of macro ‘SENDMAIL_RETURN2’ SENDMAIL_RETURN2(29, "Protocol error in sending message", buffer); ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:349:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:727:9: note: in expansion of macro ‘SENDMAIL_RETURN’ SENDMAIL_RETURN(30, "Write error in QUIT command"); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:366:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(subcode, eLOG_Error, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c:729:9: note: in expansion of macro ‘SENDMAIL_RETURN2’ SENDMAIL_RETURN2(31, "Protocol error in QUIT command", buffer); ^~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil.cpp -o sequtil.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/sequtil/sequtil_shared.cpp -o sequtil_shared.o /bin/rm -f libsequtil.so .libsequtil.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libsequtil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--aIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:50: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function ‘x_FTPCloseData’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:145:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(7, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:150:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(9, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:164:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(11, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:168:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(8, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:185:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(1, xxx->send ? eLOG_Error : eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function ‘s_FTPReply’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:293:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(10, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function ‘s_FTPCommandEx’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:373:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(4, eLOG_Trace, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function ‘x_FTPLogin’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:606:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(3, eLOG_Trace, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function ‘x_FTPPassive’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:965:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(2, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function ‘x_FTPXfer’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:1125:21: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(5, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function ‘s_FTPPollCntl’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:1656:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(12, xxx->data ? eLOG_Error : eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function ‘s_VT_Open’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:1926:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(13, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function ‘s_VT_Write’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:2001:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(6, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c: In function ‘s_CreateConnector’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c:2311:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "fFTP_UseProxy not yet implemented"); ^~~~~~~~ s-needed -Wl,--as-needed -g -O -fPIC sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libsequtil.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libsequtil.so /bin/ln -f .sequtil.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.sequtil.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil' cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/creaders/alnread.c -o alnread.o /bin/rm -f libcreaders.so .libcreaders.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libcreaders.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC alnread.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcreaders.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libcreaders.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libcreaders.so /bin/ln -f .creaders.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.creaders.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders' cd html/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=html UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/html' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/html' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/html' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/html' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/html' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/html TMPL=html -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. .c -o ncbi_host_info.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lb.c -o ncbi_lb.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_local.c -o ncbi_local.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -WfIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:38: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘g_LBOS_StringConcat’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:437:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eLBOS_MemAlloc, eLOG_Critical, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘g_LBOS_StringNConcat’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:462:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eLBOS_MemAlloc, eLOG_Critical, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘g_LBOS_RegGet’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:486:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eLBOS_MemAlloc, eLOG_Critical, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:500:13: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eLBOS_MemAlloc, eLOG_Warning, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘g_LBOS_GetLBOSAddressEx’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:568:5: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Trace, "Getting LBOS addresses..."); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:582:17: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(1, eLOG_Error, "Use of custom LBOS address " ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:589:17: note: in expansion of macro ‘CORE_LOG_ERRNO_X’ CORE_LOG_ERRNO_X(1, eLOG_Warning, errno, ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:597:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(1, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:608:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(1, eLOG_Note, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘s_LBOS_ReadLbosresolver’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:175:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(0, 0, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:727:9: note: in expansion of macro ‘CORE_LOGF_ERRNO’ CORE_LOGF_ERRNO(eLOG_Warning, errno, ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:175:5: note: in expansion of macro ‘DO_CORE_LOG_ERRNO’ DO_CORE_LOG_ERRNO(0, 0, level, error, 0, \ ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:736:9: note: in expansion of macro ‘CORE_LOGF_ERRNO’ CORE_LOGF_ERRNO(eLOG_Warning, errno, ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:745:9: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Warning, ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘s_LBOS_ConnectURL’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:829:5: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Trace, ("Parsing URL \"%s\"", url)); ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:831:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Warning, "Cannot parse URL"); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:834:5: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Trace, ("Creating HTTP%s connector", ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:841:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Warning, "Cannot create HTTP connector"); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:844:5: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Trace, "Creating connection"); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:846:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Warning, "Cannot create connection"); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘s_LBOS_UrlReadAll’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:905:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "s_LBOS_UrlReadAll: No RAM. " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:917:13: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Critical, ("s_LBOS_UrlReadAll: LBOS returned " ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:945:17: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Warning, "s_LBOS_UrlReadAll: Buffer " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:959:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Warning, "s_LBOS_UrlReadAll: Buffer shrink error, using " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘s_LBOS_ResolveIPPort’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:991:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "s_LBOS_ResolveIPPort: No RAM. " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1050:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "s_LBOS_ResolveIPPort: No RAM. " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘s_LBOS_FillCandidates’: In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:39: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function ‘s_Init’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1200:5: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(1, eLOG_Trace, ("Trying to find servers of \"%s\" with " ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1206:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(1, eLOG_Trace, ("No servers of \"%s\" found by LBOS", ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1211:5: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(1, eLOG_Trace, ("Found %u servers of \"%s\" with " ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1224:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(1, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘s_LBOS_CheckAnnounceArgs’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1254:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "Error with announcement, " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1261:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "Error with announcement, missing http:// or " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1271:17: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "Error with announcement, " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1281:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "Error with announcement, invalid port."); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1285:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "Error with announcement, " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1290:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "Error with announcement, " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1295:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "Error with announcement, " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘s_LBOS_CheckDeannounceArgs’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1309:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1315:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1320:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1325:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "Invalid argument passed for de-announcement, " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘s_LBOS_Replace0000WithIP’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:280:13: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Libc, eLOG_Error, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1410:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Warning, "Failed memory allocation. Most likely, " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1418:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Warning, ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1425:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Warning, ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘s_LBOS_ConstructData’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1569:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(1, eLOG_Error, "Could not allocate memory for LBOS mapper"); ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘s_LBOS_Initialize’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function ‘s_CONN_Create’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1644:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(1, eLOG_Trace, "No DTAB in registry"); ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1646:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(1, eLOG_Trace, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1660:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(1, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:301:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(eNSub_Connect, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:310:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Connect, eLOG_Error, "Unable to create connector."); ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘s_LBOS_ParseHeader’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1708:9: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Critical, ("s_LBOS_UrlReadAll: LBOS returned status " ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘s_LBOS_Reset’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1771:17: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "s_LBOS_Reset: No RAM. " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘SERV_LBOS_Open’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function ‘s_UpdateDtab’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:378:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Alloc, eLOG_Critical, "Couldn't alloc for dtab."); ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1897:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Warning, "Mask was provided instead of service name. " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1905:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Warning, "\"iter->name\" is null, not able " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1920:13: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Warning, "Could not concatenate dbaf with service " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1935:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Warning, ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:1949:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘s_LBOS_Announce’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function ‘s_GetReqMethod’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:398:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Alloc, eLOG_Critical, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2064:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Warning, "Announce failed. No LBOS found."); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2069:9: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Warning, ("Announce failed. " ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2078:13: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Warning, "Failed memory allocation. Most likely, " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2088:13: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Warning, "g_LBOS_Announce: LBOS answered 200 OK, but " ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function ‘s_GetScheme’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:420:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Alloc, eLOG_Critical, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function ‘s_GetProxyPort’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:443:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Alloc, eLOG_Critical, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2101:9: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Warning, ("Announce failed. " ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘LBOS_Announce’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2167:13: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eLBOS_InvalidArgs, eLOG_Critical, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function ‘s_AddServerInfo’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:527:13: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Alloc, eLOG_Critical, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function ‘s_ParseExpires’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:577:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(eNSub_Json, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘LBOS_AnnounceFromRegistry’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:607:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(eNSub_Json, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function ‘s_ReadFullResponse’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:652:13: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Alloc, eLOG_Critical, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2236:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(eLBOS_InvalidArgs, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:686:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(eNSub_HttpRead, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2243:53: warning: format ‘%d’ expects argument of type ‘int *’, but argument 3 has type ‘unsigned int *’ [-Wformat=] if (strlen(port_str) > 5 || (sscanf(port_str, "%d", &port) != 1) || ~^ ~~~~~ %d /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:706:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_TooLong, eLOG_Error, "Insufficient buffer size."); ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function ‘s_ParseResponse’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:749:13: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Json, eLOG_Error, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:754:13: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Json, eLOG_Error, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:760:13: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Json, eLOG_Error, ^~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:38: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘LBOS_Deannounce’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:776:13: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Json, eLOG_Error, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2358:13: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eLBOS_DNSResolve, eLOG_Critical, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:781:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(eNSub_NoService, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:789:13: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Json, eLOG_Error, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘LBOS_DeannounceAll’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2416:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eLBOS_MemAlloc, eLOG_Warning, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘s_LBOS_CheckConfArgs’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2468:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eLBOS_InvalidArgs, eLOG_Warning, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2475:13: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(eLBOS_InvalidArgs, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c: In function ‘LBOS_ServiceVersionSet’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c:2567:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eLBOS_InvalidArgs, eLOG_Warning, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:836:17: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Json, eLOG_Error, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:844:17: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Json, eLOG_Error, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:857:17: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Json, eLOG_Error, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:863:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(eNSub_Json, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:897:21: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(eNSub_Json, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:914:21: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Json, eLOG_Error, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:924:21: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(eNSub_Json, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:941:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(eNSub_Json, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:964:21: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(eNSub_Json, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:983:21: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Json, eLOG_Error, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:989:21: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Json, eLOG_Warning, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1007:17: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Alloc, eLOG_Critical, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1024:17: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(eNSub_BadData, eLOG_Warning, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1037:17: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Alloc, eLOG_Critical, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function ‘s_GetDtabHeaderFromBuf’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1079:13: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Alloc, eLOG_Critical, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function ‘s_UpdateDtabFromRegistry’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1140:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Alloc, eLOG_Critical, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function ‘s_ProcessDtab’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1181:13: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_TooLong, eLOG_Error, "Dtab too long."); ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c: In function ‘SERV_NAMERD_Open’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1405:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_BadData, eLOG_Error, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1415:9: note: in expansion of macro ‘CORE_LOGF_X’ CORE_LOGF_X(eNSub_BadData, eLOG_Error, ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1424:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_BadData, eLOG_Error, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1431:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Alloc, eLOG_Critical, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1439:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_Alloc, eLOG_Critical, "Couldn't clone net_info."); ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c:1446:9: note: in expansion of macro ‘CORE_LOG_X’ CORE_LOG_X(eNSub_BadData, eLOG_Critical, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/parson.c: In function ‘remove_comments’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/parson.c:281:13: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] for (i = 0; i < (ptr - string) + end_token_len; i++) ^~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/parson.c:283:12: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ string = ptr + end_token_len - 1; ^~~~~~ ormat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_base64.c -o ncbi_base64.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_version.c -o ncbi_version.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos.c -o ncbi_lbos.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namerd.c -o ncbi_namerd.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/parson.c -o parson.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_ipv6.c -o ncbi_ipv6.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_iprange.c -o ncbi_iprange.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_localip.c -o ncbi_localip.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_socket_cxx.cpp -o ncbi_socket_cxx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_core_cxx.cpp -o ncbi_core_cxx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/email_diag_handler.cpp -o email_diag_handler.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_streambuf.cpp -o ncbi_conn_streambuf.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_stream.cpp -o ncbi_conn_stream.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fmake[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o /bin/rm -f libgene_info.so .libgene_info.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libgene_info.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libgene_info.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libgene_info.so /bin/ln -f .gene_info.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.gene_info.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader' cd corelib/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' /usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `all'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' cd util/xregexp/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xregexp UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' /usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `all'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/html' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/html/node.cpp -o node.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/html/html.cpp -o html.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/html/htmlhelper.cpp -o htmlhelper.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/html/page.cpp -o page.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/html/pager.cpp -o pager.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/html/selection.cpp -o selection.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7PIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_test.cpp -o ncbi_conn_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_misc.cpp -o ncbi_misc.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namedpipe.cpp -o ncbi_namedpipe.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_namedpipe_connector.cpp -o ncbi_namedpipe_connector.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_pipe.cpp -o ncbi_pipe.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_pipe_connector.cpp -o ncbi_pipe_connector.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_conn_reader_writer.cpp -o ncbi_conn_reader_writer.o /usr/bin/gmake[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd util/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' /usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `all'. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' cd serial/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial TMPL=serial -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of ‘int’ [-Wpedantic] eNcbiCred_MbedTls = 0xC12CC16C ^~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function ‘x_GnuTlsLogger’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:190:5: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Note, ("GNUTLS%d: %.*s", level, (int) len, message)); ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function ‘x_ErrorToStatus’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:251:5: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Trace, ("GNUTLS error %d -> CONNECT GNUTLS status %s", ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function ‘x_StatusToError’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:293:9: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Trace, ("CONNECT GNUTLS status %s -> %s %d", ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function ‘s_GnuTlsCreate’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:307:5: warning: ‘gnutls_connection_end_t’ is deprecated [-Wdeprecated-declarations] gnutls_connection_end_t end = (side == eSOCK_Client ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:318:9: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Error, "Server-side SSL not yet supported with GNUTLS"); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:330:9: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Error, ("Cannot %s GNUTLS credentials: %s", ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c: In function ‘s_GnuTlsInit’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:692:9: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(level, ("GNUTLS V%s (LogLevel=%d)", ^~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:218:33: warning: ‘version’ may be used uninitialized in this function [-Wmaybe-uninitialized] _mess.message = NcbiMessagePlusError(&_mess.dynamic, \ ^~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c:657:17: note: ‘version’ was declared here const char* version; ^~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of ‘int’ [-Wpedantic] eNcbiCred_MbedTls = 0xC12CC16C ^~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function ‘x_MbedTlsLogger’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:170:5: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Note, ("MBEDTLS%d: %.*s", level, (int) len, message)); ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function ‘x_ErrorToStatus’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:250:5: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Trace, ("MBEDTLS error %d -> CONNECT MBEDTLS status %s", ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function ‘x_StatusToError’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:292:9: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Trace, ("CONNECT MBEDTLS status %s -> %s %d", ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function ‘s_MbedTlsCreate’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:336:9: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Error, ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c: In function ‘s_MbedTlsInit’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:611:9: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Critical, ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c:639:9: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(level, ("%s V%s (LogLevel=%d)", ^~~~~~~~~ .1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/html/components.cpp -o components.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/html/commentdiag.cpp -o commentdiag.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/html/indentstream.cpp -o indentstream.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/html/html_exception.cpp -o html_exception.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/html/writer_htmlenc.cpp -o writer_htmlenc.o /bin/rm -f libxhtml.so .libxhtml.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxhtml.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC node.o html.o htmlhelper.o page.o pager.o selection.o components.o commentdiag.o indentstream.o html_exception.o writer_htmlenc.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxhtml.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxhtml.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxhtml.so /bin/ln -f .xhtml.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xhtml.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/html' ++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_userhost.cpp -o ncbi_userhost.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_http_session.cpp -o ncbi_http_session.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_lbos_cxx.cpp -o ncbi_lbos_cxx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_monkey.cpp -o ncbi_monkey.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_gnutls.c -o ncbi_gnutls.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_mbedtls.c -o ncbi_mbedtls.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FOmake[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/html' cd util/compress/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=compress UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_connssl.h:47:25: warning: ISO C restricts enumerator values to range of ‘int’ [-Wpedantic] eNcbiCred_MbedTls = 0xC12CC16C ^~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c: In function ‘s_NoTlsInit’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:58:5: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "SSL has been explicitly disabled"); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c: In function ‘x_SetupNoTls’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:69:5: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Trace, "SSL has been explicitly disabled"); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c: In function ‘NcbiSetupTls’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:91:17: note: in expansion of macro ‘CORE_LOGF’ CORE_LOGF(eLOG_Critical, ("Unknown TLS provider \"%s\"", str)); ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/connect/ncbi_util.h:142:34: warning: ISO C does not support ‘__PRETTY_FUNCTION__’ predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro ‘CORE_CURRENT_FUNCTION’ _mess.func = CORE_CURRENT_FUNCTION; \ ^~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro ‘DO_CORE_LOG_X’ DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro ‘DO_CORE_LOG’ DO_CORE_LOG(0, 0, level, \ ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c:95:13: note: in expansion of macro ‘CORE_LOG’ CORE_LOG(eLOG_Critical, "No TLS support included in this build"); ^~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api TMPL=compress -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. RTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/ncbi_tls.c -o ncbi_tls.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/aes.c -o mbedtls/aes.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/aesni.c -o mbedtls/aesni.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/arc4.c -o mbedtls/arc4.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/asn1parse.c -o mbedtls/asn1parse.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/asn1write.c -o mbedtls/asn1write.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/base64.c -o mbedtls/base64.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/bignum.c -o mbedtls/bignum.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/blowfish.c -o mbedtls/blowfish.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/camellia.c -o mbedtls/camellia.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ccm.c -o mbedtls/ccm.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/cipher.c -o mbedtls/cipher.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/cipher_wrap.c -o mbedtls/cipher_wrap.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-stromake[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/hookdata.cpp -o hookdata.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/hookdatakey.cpp -o hookdatakey.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/typeinfo.cpp -o typeinfo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/objectinfo.cpp -o objectinfo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/objectiter.cpp -o objectiter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/objectio.cpp -o objectio.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THRmake[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/compress.cpp -o compress.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/stream.cpp -o stream.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/streambuf.cpp -o streambuf.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/stream_util.cpp -o stream_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/bzip2.cpp -o bzip2.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/zlib.cpp -o zlib.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFng -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/cmac.c -o mbedtls/cmac.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ctr_drbg.c -o mbedtls/ctr_drbg.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/des.c -o mbedtls/des.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/dhm.c -o mbedtls/dhm.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ecdh.c -o mbedtls/ecdh.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ecdsa.c -o mbedtls/ecdsa.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/incmake[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp -o gene_info_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gene_info_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lgene_info -lxncbi -ldl -lm -lpthread -o gene_info_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f gene_info_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/gene_info_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' cd cgi/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/cgi TMPL=cgi -w -j4 --jobserver-auth=7,8 all /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/run_with_lock: Adjusting base from make_cgi to make__cgi_common per /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/cgi/.#lock-map. make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/reader_zlib.cpp: In destructor ‘virtual ncbi::CNlmZipReader::~CNlmZipReader()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/reader_zlib.cpp:281:19: warning: enum constant in boolean context [-Wint-in-bool-context] if ( m_Own && fOwnReader ) { ^~~~~~~~~~ -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ecjpake.c -o mbedtls/ecjpake.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ecp.c -o mbedtls/ecp.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ecp_curves.c -o mbedtls/ecp_curves.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/entropy.c -o mbedtls/entropy.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/entropy_poll.c -o mbedtls/entropy_poll.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/error.c -o mbedtls/error.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/gcm.c -o mbedtls/gcm.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/havege.c -o mbedtls/havege.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/hmac_drbg.c -o mbedtls/hmac_drbg.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/md.c -o mbedtls/md.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/md2.c -o mbedtls/md2.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/md4.c -o mbedtls/md4.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/mbedtls_md5.c -o mbedtls/mbedtls_md5.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/md_wrap.c -o mbedtls/md_wrap.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/memory_buffer_alloc.c -o mbedtls/memory_buffer_alloc.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/oid.c -o mbedtls/oid.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/padlock.c -o mbedtls/padlock.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/pem.c -o mbedtls/pem.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/pk.c -o mbedtls/pk.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/pk_wrap.c -o mbedtls/pk_wrap.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/pkcs12.c -o mbedtls/pkcs12.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/pkcs5.c -o mbedtls/pkcs5.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/pkparse.c -o mbedtls/pkparse.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/pkwrite.c -o mbedtls/pkwrite.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/platform.c -o mbedtls/platform.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ripemd160.c -o mbedtls/ripemd160.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp: In member function ‘void ncbi::CCgiRequest::GetCGIEntries(ncbi::CEntryCollector_Base&) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp:1648:16: warning: catching polymorphic type ‘class ncbi::CStringException’ by value [-Wcatch-value=] catch (CStringException) { ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp: In member function ‘ncbi::CStringUTF8 ncbi::CCgiEntry::GetValueAsUTF8(ncbi::CCgiEntry::EOnCharsetError) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp:1905:12: warning: catching polymorphic type ‘class ncbi::CException’ by value [-Wcatch-value=] catch (CException) { ^~~~~~~~~~ +-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/rsa.c -o mbedtls/rsa.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/sha1.c -o mbedtls/sha1.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/sha256.c -o mbedtls/sha256.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/sha512.c -o mbedtls/sha512.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/threading.c -o mbedtls/threading.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/timing.c -o mbedtls/timing.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp.cpp: In member function ‘bool ncbi::CCgiApplication::x_ProcessVersionRequest()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp.cpp:1891:12: warning: catching polymorphic type ‘class ncbi::CStringException’ by value [-Wcatch-value=] catch (CStringException) { ^~~~~~~~~~~~~~~~ MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/mbedtls_version.c -o mbedtls/mbedtls_version.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/version_features.c -o mbedtls/version_features.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/xtea.c -o mbedtls/xtea.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/certs.c -o mbedtls/certs.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/pkcs11.c -o mbedtls/pkcs11.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/x509.c -o mbedtls/x509.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtl/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp: In member function ‘unsigned int ncbi::CTarEntryInfo::GetMajor() const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp:479:19: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] return (*((unsigned int*) &m_Stat.st_rdev) >> 16) & 0xFFFF; ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp: In member function ‘unsigned int ncbi::CTarEntryInfo::GetMinor() const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp:494:18: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] return *((unsigned int*) &m_Stat.st_rdev) & 0xFFFF; ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ s/x509_create.c -o mbedtls/x509_create.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/x509_crl.c -o mbedtls/x509_crl.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/x509_crt.c -o mbedtls/x509_crt.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/x509_csr.c -o mbedtls/x509_csr.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/x509write_crt.c -o mbedtls/x509write_crt.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/x509write_csr.c -o mbedtls/x509write_csr.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/debug.c -o mbedtls/debug.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=//build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp: In member function ‘ncbi::CTar::EStatus ncbi::CTar::x_ReadEntryInfo(bool, bool)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/tar.cpp:2224:15: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] *((unsigned int*) &m_Current.m_Stat.st_rdev) = ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/net_sockets.c -o mbedtls/net_sockets.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ssl_cache.c -o mbedtls/ssl_cache.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ssl_ciphersuites.c -o mbedtls/ssl_ciphersuites.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ssl_cli.c -o mbedtls/ssl_cli.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ssl_cookie.c -o mbedtls/ssl_cookie.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ssl_srv.c -o mbedtls/ssl_srv.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp: In member function ‘unsigned int ncbi::CArchiveEntryInfo::GetMajor() const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp:91:19: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] return (*((unsigned int*) &m_Stat.st_rdev) >> 16) & 0xFFFF; ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp: In member function ‘unsigned int ncbi::CArchiveEntryInfo::GetMinor() const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp:107:18: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] return *((unsigned int*) &m_Stat.st_rdev) & 0xFFFF; ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ EAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/typeref.cpp -o typeref.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/typemap.cpp -o typemap.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/stdtypes.cpp -o stdtypes.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/enumerated.cpp -o enumerated.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/ptrinfo.cpp -o ptrinfo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/autoptrinfo.cpp -o autoptrinfo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/continfo.cpp -o continfo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_zip.cpp:45: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c: In function ‘ncbi::tinfl_status ncbi::tinfl_decompress(ncbi::tinfl_decompressor*, const mz_uint8*, size_t*, ncbi::mz_uint8*, ncbi::mz_uint8*, size_t*, ncbi::mz_uint32)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c:1531:9: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] for ( i = 0; i <= 143; ++i) *p++ = 8; for ( ; i <= 255; ++i) *p++ = 9; for ( ; i <= 279; ++i) *p++ = 7; for ( ; i <= 287; ++i) *p++ = 8; ^~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c:1531:47: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ for ( i = 0; i <= 143; ++i) *p++ = 8; for ( ; i <= 255; ++i) *p++ = 9; for ( ; i <= 279; ++i) *p++ = 7; for ( ; i <= 287; ++i) *p++ = 8; ^~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c: In function ‘void ncbi::tdefl_find_match(ncbi::tdefl_compressor*, ncbi::mz_uint, ncbi::mz_uint, ncbi::mz_uint, ncbi::mz_uint*, ncbi::mz_uint*)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c:2327:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] if (!dist) break; q = (const mz_uint16*)(d->m_dict + probe_pos); if (TDEFL_READ_UNALIGNED_WORD(q) != s01) continue; p = s; probe_len = 32; ^~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/miniz/miniz.c:2327:23: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ if (!dist) break; q = (const mz_uint16*)(d->m_dict + probe_pos); if (TDEFL_READ_UNALIGNED_WORD(q) != s01) continue; p = s; probe_len = 32; ^ /usr/bin/ld: warning: size of symbol `mbedtls_threading_readdir_mutex' changed from 8 in mbedtls/threading.o to 48 in /usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu/libmbedcrypto.so Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ssl_ticket.c -o mbedtls/ssl_ticket.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/connect/mbedtls/ssl_tls.c -o mbedtls/ssl_tls.o /bin/rm -f libxconnect.so .libxconnect.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxconnect.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC ncbi_lbsmd_stub.o ncbi_ansi_ext.o ncbi_buffer.o ncbi_types.o ncbi_priv.o ncbi_core.o ncbi_util.o ncbi_socket.o ncbi_connutil.o ncbi_connection.o ncbi_connector.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_heapmgr.o ncbi_server_info.o ncbi_service.o ncbi_host_info.o ncbi_dispd.o ncbi_service_connector.o ncbi_sendmail.o ncbi_ftp_connector.o ncbi_lb.o ncbi_local.o ncbi_base64.o ncbi_version.o ncbi_lbos.o ncbi_namerd.o parson.o ncbi_ipv6.o ncbi_iprange.o ncbi_localip.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o ncbi_http_session.o ncbi_lbos_cxx.o ncbi_monkey.o ncbi_gnutls.o ncbi_mbedtls.o ncbi_tls.o mbedtls/aes.o mbedtls/aesni.o mbedtls/arc4.o mbedtls/asn1parse.o mbedtls/asn1write.o mbedtls/base64.o mbedtls/bignum.o mbedtls/blowfish.o mbedtls/camellia.o mbedtls/ccm.o mbedtls/cipher.o mbedtls/cipher_wrap.o mbedtls/cmac.o mbedtls/ctr_drbg.o mbedtls/des.o mbedtls/dhm.o mbedtls/ecdh.o mbedtls/ecdsa.o mbedtls/ecjpake.o mbedtls/ecp.o mbedtls/ecp_curves.o mbedtls/entropy.o mbedtls/entropy_poll.o mbedtls/error.o mbedtls/gcm.o mbedtls/havege.o mbedtls/hmac_drbg.o mbedtls/md.o mbedtls/md2.o mbedtls/md4.o mbedtls/mbedtls_md5.o mbedtls/md_wrap.o mbedtls/memory_buffer_alloc.o mbedtls/oid.o mbedtls/padlock.o mbedtls/pem.o mbedtls/pk.o mbedtls/pk_wrap.o mbedtls/pkcs12.o mbedtls/pkcs5.o mbedtls/pkparse.o mbedtls/pkwrite.o mbedtls/platform.o mbedtls/ripemd160.o mbedtls/rsa.o mbedtls/sha1.o mbedtls/sha256.o mbedtls/sha512.o mbedtls/threading.o mbedtls/timing.o mbedtls/mbedtls_version.o mbedtls/version_features.o mbedtls/xtea.o mbedtls/certs.o mbedtls/pkcs11.o mbedtls/x509.o mbedtls/x509_create.o mbedtls/x509_crl.o mbedtls/x509_crt.o mbedtls/x509_csr.o mbedtls/x509write_crt.o mbedtls/x509write_csr.o mbedtls/debug.o mbedtls/net_sockets.o mbedtls/ssl_cache.o mbedtls/ssl_ciphersuites.o mbedtls/ssl_cli.o mbedtls/ssl_cookie.o mbedtls/ssl_srv.o mbedtls/ssl_ticket.o mbedtls/ssl_tls.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxncbi -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxconnect.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxconnect.so /bin/ln -f .xconnect.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xconnect.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' cd algo/blast/core/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core TMPL=blast -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c: In function ‘s_BlastAaWordFinder_TwoHit’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c:484:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c:491:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c: In function ‘s_BlastAaWordFinder_OneHit’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c:751:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c:758:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c: In function ‘BLAST_PreliminarySearchEngine’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c:1490:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] (T_MB_IdbCheckOid)lookup_wrap->check_index_oid; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c:1628:22: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] ((T_MB_IdxEndSearchIndication)( ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c:1715:10: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] ((T_MB_IdxEndSearchIndication)( ^ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/aa_ungapped.c -o aa_ungapped.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_diagnostics.c -o blast_diagnostics.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_engine.c -o blast_engine.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_extend.c -o blast_extend.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_filter.c -o blast_filter.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_gapalign.c -o blast_gapalign.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_hits.c -o blast_hits.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_hspstream.c -o blast_hspstream.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_itree.c -o blast_itree.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_kappa.c -o blast_kappa.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_lookup.c -o blast_lookup.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aalookup.c -o blast_aalookup.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFI/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c: In function ‘BlastChooseProteinScanSubject’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c:567:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->scansub_callback = (void *)s_BlastAaScanSubject; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c:570:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->scansub_callback = (void *)s_BlastSmallAaScanSubject; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c:575:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->scansub_callback = (void *)s_BlastCompressedAaScanSubject; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c: In function ‘BlastNaHashLookupTableNew’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c:2225:27: warning: ISO C forbids assignment between function pointer and ‘void *’ [-Wpedantic] lookup->hash_callback = FNV_hash; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c:2284:49: warning: ISO C forbids passing argument 8 of ‘BlastHashLookupIndexQueryExactMatches’ between function pointer and ‘void *’ [-Wpedantic] lookup->hash_callback, ~~~~~~^~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/core/blast_nalookup.h:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c:31: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/core/blast_lookup.h:181:66: note: expected ‘TNaLookupHashFunction’ {aka ‘unsigned int (*)(unsigned char *, unsigned int)’} but argument is of type ‘void *’ TNaLookupHashFunction hash_func, ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function ‘s_NaChooseScanSubject’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:291:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastNaScanSubject_8_4; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:293:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastNaScanSubject_Any; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function ‘s_SmallNaChooseScanSubject’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1320:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_4_1; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1322:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1327:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_5_1; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1329:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1334:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_6_1; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1336:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_6_2; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1338:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1343:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_1; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1345:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_2; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1347:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_3; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1349:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1354:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_8_4; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1360:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] (void *)s_BlastSmallNaScanSubject_Any; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1364:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] (void *)s_BlastSmallNaScanSubject_8_1Mod4; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1368:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] (void *)s_BlastSmallNaScanSubject_8_2Mod4; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:1372:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] (void *)s_BlastSmallNaScanSubject_8_3Mod4; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function ‘s_MBChooseScanSubject’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2620:24: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] (void *)s_MB_DiscWordScanSubject_TwoTemplates_1; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2622:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_11_18_1; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2624:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_11_21_1; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2626:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_1; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2634:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_9_1; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2636:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_9_2; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2638:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_Any; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2643:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_10_1; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2645:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_10_2; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2647:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_10_3; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2649:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_Any; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2655:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_Any; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2658:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_11_1Mod4; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2661:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_11_2Mod4; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2664:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_11_3Mod4; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2676:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_Any; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function ‘s_BlastNaHashLookupRetieveHits’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2705:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] (TNaLookupHashFunction)lookup->hash_callback; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function ‘s_NaHashChooseScanSubject’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2978:32: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void*)s_BlastNaHashScanSubject_Any; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c: In function ‘BlastChooseNucleotideScanSubjectAny’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:2997:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] return (void *)s_BlastNaScanSubject_Any; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:3000:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] return (void *)s_BlastSmallNaScanSubject_Any; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:3003:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] return (void*)s_BlastNaHashScanSubject_Any; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c:3006:12: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] return (void *)s_MBScanSubject_Any; ^ LE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_aascan.c -o blast_aascan.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nalookup.c -o blast_nalookup.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_nascan.c -o blast_nascan.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_message.c -o blast_message.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_options.c -o blast_options.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_psi.c -o blast_psi.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-b/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function ‘s_IsSeedMasked’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:488:15: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] return !(((T_Lookup_Callback)(lookup_wrap->lookup_callback)) ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function ‘BlastNaWordFinder’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1622:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TNaScanSubjectFunction)lookup->scansub_callback; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1623:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] extend = (TNaExtendFunction)lookup->extend_callback; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1635:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TNaScanSubjectFunction)lookup->scansub_callback; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1636:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] extend = (TNaExtendFunction)lookup->extend_callback; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1643:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TNaScanSubjectFunction)lookup->scansub_callback; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1644:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] extend = (TNaExtendFunction)lookup->extend_callback; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1657:23: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TNaScanSubjectFunction) ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function ‘MB_IndexedWordFinder’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1723:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] (T_MB_IdbCheckOid)lookup_wrap->check_index_oid; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1725:25: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] (T_MB_IdbGetResults)lookup_wrap->read_indexed_db; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function ‘BlastChooseNaExtend’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1795:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup_wrap->lookup_callback = (void *)s_MBLookup; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1799:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastNaExtendDirect; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1802:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastNaExtendAligned; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1804:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastNaExtend; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1808:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup_wrap->lookup_callback = (void *)s_SmallNaLookup; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1812:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastNaExtendDirect; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1816:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastSmallNaExtendAlignedOneByte; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1818:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastSmallNaExtend; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1825:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup_wrap->lookup_callback = (void *)s_NaLookup; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1829:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastNaExtendDirect; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1832:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastNaExtendAligned; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1834:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastNaExtend; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function ‘JumperNaWordFinder’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1974:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TNaScanSubjectFunction)lookup->scansub_callback; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1986:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TNaScanSubjectFunction)lookup->scansub_callback; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:1994:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TNaScanSubjectFunction)lookup->scansub_callback; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:2001:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TNaScanSubjectFunction)lookup->scansub_callback; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:2014:23: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TNaScanSubjectFunction) ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c: In function ‘ShortRead_IndexedWordFinder’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:2188:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] (T_MB_IdbCheckOid)lookup_wrap->check_index_oid; ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c:2190:25: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] (T_MB_IdbGetResults)lookup_wrap->read_indexed_db; ^ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgi.cpp -o ncbicgi.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/cgi/cgiapp.cpp -o cgiapp.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/cgi/cgictx.cpp -o cgictx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/cgi/ncbicgir.cpp -o ncbicgir.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/cgi/ncbires.cpp -o ncbires.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/cgi/ref_args.cpp -o ref_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbiURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/stltypes.cpp -o stltypes.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/memberid.cpp -o memberid.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/memberlist.cpp -o memberlist.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/item.cpp -o item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/classinfob.cpp -o classinfob.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/member.cpp -o member.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/classinfo.cpp -o classinfo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-colast+-2.7.1/c++/src/algo/blast/core/na_ungapped.c -o na_ungapped.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_psi_priv.c -o blast_psi_priv.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_seg.c -o blast_seg.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_seqsrc.c -o blast_seqsrc.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_setup.c -o blast_setup.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_stat.c -o blast_stat.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_traceback.c -o blast_traceback.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/us/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_util.c: In function ‘BlastProgram2Number’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_util.c:306:10: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] else if (strcasecmp("mapper", program) == 0) ^~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_util.c:309:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ return 0; ^~~~~~ r/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_util.c -o blast_util.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/gapinfo.c -o gapinfo.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/greedy_align.c -o greedy_align.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/hspfilter_collector.c -o hspfilter_collector.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/hspfilter_besthit.c -o hspfilter_besthit.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/hspfilter_culling.c -o hspfilter_culling.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIF/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/link_hsps.c: In function ‘s_FwdCompareHSPs’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/link_hsps.c:133:10: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] else if (h1->context > h2->context) ^~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/link_hsps.c:136:2: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ if (h1->query.offset < h2->query.offset) ^~ Y_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/link_hsps.c -o link_hsps.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/lookup_util.c -o lookup_util.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/lookup_wrap.c -o lookup_wrap.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/matrix_freq_ratios.c -o matrix_freq_ratios.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/ncbi_std.c -o ncbi_std.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/ncbi_math.c -o ncbi_math.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/blast_encoding.c -o blast_encoding.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/pattern.c -o pattern.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/core/phi_extend.c -o phi_extend.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs 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cgiapp_cached.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFmpile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG 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-I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/aliasinfo.cpp -o aliasinfo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/objistr.cpp -o objistr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG 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blast_engine.o blast_extend.o blast_filter.o blast_gapalign.o blast_hits.o blast_hspstream.o blast_itree.o blast_kappa.o blast_lookup.o blast_aalookup.o blast_aascan.o blast_nalookup.o blast_nascan.o blast_message.o blast_options.o blast_psi.o na_ungapped.o blast_psi_priv.o blast_seg.o blast_seqsrc.o blast_setup.o blast_stat.o blast_traceback.o blast_util.o gapinfo.o greedy_align.o hspfilter_collector.o hspfilter_besthit.o hspfilter_culling.o link_hsps.o lookup_util.o lookup_wrap.o matrix_freq_ratios.o ncbi_std.o ncbi_math.o blast_encoding.o pattern.o phi_extend.o phi_gapalign.o phi_lookup.o blast_parameters.o blast_posit.o blast_program.o blast_query_info.o blast_tune.o blast_sw.o blast_dynarray.o split_query.o gencode_singleton.o index_ungapped.o blast_traceback_mt_priv.o blast_hspstream_mt_utils.o boost_erf.o jumper.o hspfilter_mapper.o spliced_hits.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib 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/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_.cpp -o archive_.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o /bin/rm -f libxcompress.so .libxcompress.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxcompress.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC compress.o stream.o streambuf.o stream_util.o bzip2.o zlib.o lzo.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxcompress.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxcompress.so /bin/ln -f .xcompress.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xcompress.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api' bjlist.cpp -o objlist.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/objstack.cpp -o objstack.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/objostrasn.cpp -o objostrasn.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/objistrasn.cpp -o objistrasn.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/objostrasnb.cpp -o objostrasnb.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/objistrasnb.cpp -o objistrasnb.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/objostrxml.cpp -o objostrxml.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/objistrxml.cpp -o objistrxml.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/objostrjson.cpp -o objostrjson.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/objistrjson.cpp -o objistrjson.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/serializable.cpp -o serializable.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/serialobject.cpp -o serialobject.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/pathhook.cpp -o pathhook.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/rpcbase.cpp -o rpcbase.o /bin/rm -f libxser.so .libxser.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxser.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC hookdata.o hookdatakey.o typeinfo.o objectinfo.o objectiter.o objectio.o typeref.o typemap.o stdtypes.o enumerated.o ptrinfo.o autoptrinfo.o continfo.o stltypes.o memberid.o memberlist.o item.o classinfob.o member.o classinfo.o variant.o choice.o choiceptr.o aliasinfo.o objistr.o objostr.o objcopy.o iterator.o serial.o delaybuf.o pack_string.o exception.o objhook.o objlist.o objstack.o objostrasn.o objistrasn.o objostrasnb.o objistrasnb.o objostrxml.o objistrxml.o objostrjson.o objistrjson.o serializable.o serialobject.o pathhook.o rpcbase.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxser.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxser.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxser.so /bin/ln -f .xser.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xser.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' cd serial/datatool/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=datatool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool TMPL=datatool -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/statictype.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.cpp -o datatool.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/type.cpp -o type.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/namespace.cpp -o namespace.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/statictype.cpp -o statictype.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumtype.cpp -o enumtype.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/reftype.cpp -o reftype.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/impl/stltypes.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/unitype.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/blocktype.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicetype.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ IFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/unitype.cpp -o unitype.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/blocktype.cpp -o blocktype.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicetype.cpp -o choicetype.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/typestr.cpp -o typestr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/ptrstr.cpp -o ptrstr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/stdstr.cpp -o stdstr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/classstr.cpp -o classstr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstaIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/stlstr.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/datatool.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/classstr.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicestr.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ ck-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/enumstr.cpp -o enumstr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/stlstr.cpp -o stlstr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/choicestr.cpp -o choicestr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/choiceptrstr.cpp -o choiceptrstr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/value.cpp -o value.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/mcontainer.cpp -o mcontainer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/module.cpp -o module.o /usr/bin/g++ -std=gnu++11 -c -WaIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/module.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/moduleset.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/generate.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/filecode.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ ll -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/moduleset.cpp -o moduleset.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/generate.cpp -o generate.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/filecode.cpp -o filecode.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/code.cpp -o code.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/fileutil.cpp -o fileutil.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/alexer.cpp -o alexer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/aparser.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.cpp:66:50: note: in expansion of macro ‘THROWS’ CDataType* CResolvedTypeSet::GetType(void) const THROWS((CDatatoolException)) ^~~~~~ -2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/aparser.cpp -o aparser.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/parser.cpp -o parser.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/lexer.cpp -o lexer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.cpp -o exceptions.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/comments.cpp -o comments.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/srcutil.cpp -o srcutil.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdaux.cpp -o dtdaux.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/rpcgen.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdparser.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/aliasstr.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdparser.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ IFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdlexer.cpp -o dtdlexer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/dtdparser.cpp -o dtdparser.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/rpcgen.cpp -o rpcgen.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/aliasstr.cpp -o aliasstr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdlexer.cpp -o xsdlexer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/xsdparser.cpp -o xsdparser.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdllexer.cpp -o wsdllexer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.speIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlparser.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlstr.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdparser.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/exceptions.hpp:135:36: note: in expansion of macro ‘THROWS’ CDataType* GetType(void) const THROWS((CDatatoolException)); ^~~~~~ cs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlparser.cpp -o wsdlparser.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/wsdlstr.cpp -o wsdlstr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdlexer.cpp -o jsdlexer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/jsdparser.cpp -o jsdparser.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_pattern_match_callback.cpp -o traversal_pattern_match_callback.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_code_generator.cpp -o traversal_code_generator.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_merger.cpp -o traversal_merger.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/serial/datatool/traversal_spec_file_parser.cpp -o traversal_spec_file_parser.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie datatool.o type.o namespace.o statictype.o enumtype.o reftype.o unitype.o blocktype.o choicetype.o typestr.o ptrstr.o stdstr.o classstr.o enumstr.o stlstr.o choicestr.o choiceptrstr.o value.o mcontainer.o module.o moduleset.o generate.o filecode.o code.o fileutil.o alexer.o aparser.o parser.o lexer.o exceptions.o comments.o srcutil.o dtdaux.o dtdlexer.o dtdparser.o rpcgen.o aliasstr.o xsdlexer.o xsdparser.o wsdllexer.o wsdlparser.o wsdlstr.o jsdlexer.o jsdparser.o traversal_pattern_match_callback.o traversal_code_generator.o traversal_merger.o traversal_node.o traversal_spec_file_parser.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread -o datatool /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f datatool /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool' cd objects/general/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources cd objects/biblio/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources cd objects/medline/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources cd objects/pub/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh general all cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh biblio all cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh medline all cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh pub all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m general.asn -M "" -oA -oc general -or objects/general -odi -od general.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd general.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pub -or objects/pub -odi -od pub.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general' /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medline -or objects/medline -odi -od medline.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline' /usr/bin/make[4] (Makefile.general.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline' /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m biblio.asn -M "objects/general/general.asn" -oA -oc biblio -or objects/biblio -odi -od biblio.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd biblio.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.medline.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio' /usr/bin/make[4] (Makefile.biblio.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m general.asn -M "" -oA -oc general -or objects/general -odi -od general.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd general.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general' cd objects/seqcode/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medline -or objects/medline -odi -od medline.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline' cd objects/seq/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m biblio.asn -M "objects/general/general.asn" -oA -oc biblio -or objects/biblio -odi -od biblio.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd biblio.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio' cd objects/seqset/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqcode && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seqcode all make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pub -or objects/pub -odi -od pub.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub' cd objects/scoremat/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' make[5]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seqset all cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/scoremat && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh scoremat all make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/Makefile.sources builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -w -j4 --jobserver-auth=9,10 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqcode' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m seqcode.asn -M "" -oA -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqcode' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqcode' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqcode' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode' /usr/bin/make[4] (Makefile.seqcode.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA -oc seqset -or objects/seqset -odi -od seqset.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/scoremat' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/scoremat' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/scoremat' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/scoremat' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat' /usr/bin/make[4] (Makefile.seqset.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.scoremat.lib): Nothing to be done for `export-headers'. make[7]: warning: -j4 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' status=0 ; \ MAKE="/usr/bin/make -w -j4 --jobserver-auth=12,14"; \ export MAKE; \ for x in seqalign seqblock seqfeat seqloc seqres seqtable; do \ d=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../$x ; \ (cd $d && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh) || status=9 ; \ test -f ${x}__.cpp || \ echo "#include \"../$x/${x}__.cpp\"" > ${x}__.cpp ; \ test -f ${x}___.cpp || \ echo "#include \"../$x/${x}___.cpp\"" > ${x}___.cpp ; \ done ; \ exit $status /usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqalign MODULE_PATH=objects/seqalign MODULE_ASN=seqalign.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqalign' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m seqalign.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqalign -or objects/seqalign -odi -od seqalign.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqalign.dump datatool: 2.17.0 make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqalign' /usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqblock MODULE_PATH=objects/seqblock MODULE_ASN=seqblock.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqblock' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m seqblock.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqblock -or objects/seqblock -odi -od seqblock.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqblock.dump datatool: 2.17.0 make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqblock' /usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqfeat MODUmake[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: warning: -j4 forced in submake: resetting jobserver mode. LE_PATH=objects/seqfeat MODULE_ASN=seqfeat.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/pub/pub objects/seqloc/seqloc objects/seq/seq' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m seqfeat.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn" -oA -oc seqfeat -or objects/seqfeat -odi -od seqfeat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqfeat.dump datatool: 2.17.0 make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat' /usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqloc MODULE_PATH=objects/seqloc MODULE_ASN=seqloc.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m seqloc.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn" -oA -oc seqloc -or objects/seqloc -odi -od seqloc.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqloc.dump datatool: 2.17.0 make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc' /usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqres MODULE_PATH=objects/seqres MODULE_ASN=seqres.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILDmake[7]: warning: -j4 forced in submake: resetting jobserver mode. make[7]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqcode' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m seqcode.asn -M "" -oA -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqcode' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode' cd objects/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blast && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh blast all /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA -oc seqset -or objects/seqset -odi -od seqset.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset' cd objects/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/scoremat' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/scoremat' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat' cd objects/genomecoll/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastdb && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh blastdb all cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh genome_collection all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastdb' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastdb' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastdb' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blast' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA -oc blast -or objects/blast -odi -od blast.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blast' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blast' /usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh gencoll_client all make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' Waiting for /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/make_asn.lock/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' /usr/bin/make[4] (Makefile.xnetblastcli.lib): Nothing to be done for `export-headers'. /build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqres' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m seqres.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqres -or objects/seqres -odi -od seqres.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqres.dump datatool: 2.17.0 make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqres' /usr/bin/make -w -j4 --jobserver-auth=12,14 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqtable MODULE_PATH=objects/seqtable MODULE_ASN=seqtable.asn MODULE_IMPORT='objects/general/general objects/seq/seq objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqtable' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m seqtable.asn -M "objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn" -oA -oc seqtable -or objects/seqtable -odi -od seqtable.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqtable.dump datatool: 2.17.0 make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqtable' make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seq all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqblock/seqblock.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqres/seqres.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA -oc seq -or objects/seq -odi -od seq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' /usr/bin/make[4] (Makefile.seq.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blast' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA -oc blast -or objects/blast -odi -od blast.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blast' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' cd objects/seqedit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqedit && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seqedit all /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastdb' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb' cd objects/seqsplit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqsplit && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh seqsplit all /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqedit' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqedit' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqedit' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqedit' /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqsplit' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqsplit' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqsplit' make[5]: warning: -j4 forced in submake: resetting jobserver mode. .make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit' make[5]: warning: -j4 forced in submake: resetting jobserver mode. Acquired /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/make_asn.lock for PID 26089 (make_asn) make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqsplit' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.seqedit.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit' /usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'. make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA -oc gencoll_client -or objects/genomecoll -odi -od gencoll_client.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gencoll_client.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' /usr/bin/make[4] (Makefile.genome_collection.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' /usr/bin/make[4] (Makefile.gencoll_client.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqblock/seqblock.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqres/seqres.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA -oc seq -or objects/seq -odi -od seq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' cd objects/submit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/submit && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh submit all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/submit' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA -oc submit -or objects/submit -odi -od submit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd submit.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/submit' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/submit' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/submit' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit' /usr/bin/make[4] (Makefile.submit.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqedit' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqedit' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit' cd objects/variation/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/variation && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh variation all /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqsplit' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqsplit' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit' cd objects/id1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id1 && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh id1 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/variation' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA -oc variation -or objects/variation -odi -od variation.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/variation' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/variation' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/variation' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id1' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m id1.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn" -oA -oc id1 -or objects/id1 -odi -od id1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id1.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id1' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id1' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id1' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.variation.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' /usr/bin/make[4] (Makefile.id1.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA -oc gencoll_client -or objects/genomecoll -odi -od gencoll_client.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gencoll_client.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' cd objects/id2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id2 && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh id2 all /usr/bin/make[4] (Makefile.id1cli.lib): Nothing to be done for `export-headers'. make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id2' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA -oc id2 -or objects/id2 -odi -od id2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id2.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' /usr/bin/make[4] (Makefile.id2.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' /usr/bin/make[4] (Makefile.id2cli.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/submit' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA -oc submit -or objects/submit -odi -od submit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd submit.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/submit' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit' cd objects/taxon1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1 && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh taxon1 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1' /usr/bin/make[4] (Makefile.taxon1.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/variation' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA -oc variation -or objects/variation -odi -od variation.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/variation' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation' cd objects/blastxml/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh blastxml all /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id1' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m id1.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn" -oA -oc id1 -or objects/id1 -odi -od id1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id1.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id1' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' cd objects/blastxml2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml2 && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh blastxml2 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. File blastxml.module not found. Using defaults... /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m blastxml.asn -M "" -oA -oc blastxml -or objects/blastxml -odi -od blastxml.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml' /usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'. File blastxml2.module not found. Using defaults... /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml2' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m blastxml2.asn -M "" -oA -oc blastxml2 -or objects/blastxml2 -odi -od blastxml2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml2.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2' /usr/bin/make[4] (Makefile.blastxml2.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id2' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA -oc id2 -or objects/id2 -odi -od id2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id2.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id2' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' cd objects/entrez2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/entrez2 && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh entrez2 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/entrez2' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m entrez2.asn -M "" -oA -oc entrez2 -or objects/entrez2 -odi -od entrez2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd entrez2.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/entrez2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/entrez2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/entrez2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' /usr/bin/make[4] (Makefile.entrez2.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' /usr/bin/make[4] (Makefile.entrez2cli.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1' cd objects/gbseq/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/gbseq && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh gbseq all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/gbseq' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m gbseq.asn -M "" -oA -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/gbseq' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/gbseq' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/gbseq' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq' /usr/bin/make[4] (Makefile.gbseq.lib): Nothing to be done for `export-headers'. File blastxml.module not found. Using defaults... /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m blastxml.asn -M "" -oA -oc blastxml -or objects/blastxml -odi -od blastxml.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml' cd objects/medlars/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medlars && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh medlars all File blastxml2.module not found. Using defaults... /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml2' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m blastxml2.asn -M "" -oA -oc blastxml2 -or objects/blastxml2 -odi -od blastxml2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml2.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml2' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2' cd objects/pubmed/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pubmed && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh pubmed all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medlars' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m medlars.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medlars -or objects/medlars -odi -od medlars.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medlars.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medlars' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medlars' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medlars' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars' /usr/bin/make[4] (Makefile.medlars.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pubmed' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pubmed' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pubmed' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pubmed' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed' /usr/bin/make[4] (Makefile.pubmed.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/entrez2' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m entrez2.asn -M "" -oA -oc entrez2 -or objects/entrez2 -odi -od entrez2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd entrez2.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/entrez2' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' cd objects/mla/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/mla && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh mla all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/mla' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA -oc mla -or objects/mla -odi -od mla.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd mla.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/mla' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/mla' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/mla' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' /usr/bin/make[4] (Makefile.mla.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' /usr/bin/make[4] (Makefile.mlacli.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/gbseq' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m gbseq.asn -M "" -oA -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/gbseq' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq' cd objects/taxon3/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon3 && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh taxon3 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon3' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon3 -or objects/taxon3 -odi -od taxon3.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon3.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon3' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon3' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon3' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3' /usr/bin/make[4] (Makefile.taxon3.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medlars' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m medlars.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medlars -or objects/medlars -odi -od medlars.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medlars.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medlars' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars' cd objects/valid/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 sources make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/valid && /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/new_module.sh valid all /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pubmed' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pubmed' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed' cd objects/general/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=general UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general TMPL=general -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/valid' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m valid.asn -M "" -oA -oc valid -or objects/valid -odi -od valid.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/valid' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/valid' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/valid' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid' /usr/bin/make[4] (Makefile.valid.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline/medline.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed.asn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/mla' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA -oc mla -or objects/mla -odi -od mla.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd mla.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/mla' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' cd objects/seqcode/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqcode UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqcode TMPL=seqcode -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon3' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon3 -or objects/taxon3 -odi -od taxon3.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon3.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon3' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3' cd objects/blastxml/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml TMPL=blastxml -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqcode/seqcode__.cpp -o seqcode__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o /bin/rm -f libseqcode.so .libseqcode.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libseqcode.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqcode__.o seqcode___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libseqcode.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqcode.so /bin/ln -f .seqcode.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.seqcode.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode' cd objects/blastxml2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastxml2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -w -j4 --jobserver-auth=7,8 -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ builddir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build DATATOOL=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/valid' /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++ -opm /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src -m valid.asn -M "" -oA -oc valid -or objects/valid -odi -od valid.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump datatool: 2.17.0 make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/valid' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid' cd objects/entrez2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2 UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j4 --jobserver-auth=7,8 all /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/entrez2 TMPL=entrez2 -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml/blastxml__.cpp -o blastxml__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml/blastxml___.cpp -o blastxml___.o /bin/rm -f libblastxml.so .libblastxml.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libblastxml.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastxml__.o blastxml___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libblastxml.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastxml.so /bin/ln -f .blastxml.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.blastxml.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml' cd objects/gbseq/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=gbseq UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/gbseq TMPL=gbseq -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/blastxml2__.cpp -o blastxml2__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastxml2/blastxml2___.cpp -o blastxml2___.o /bin/rm -f libblastxml2.so .libblastxml2.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libblastxml2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastxml2__.o blastxml2___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml2.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libblastxml2.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastxml2.so /bin/ln -f .blastxml2.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.blastxml2.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general__.cpp -o general__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/general___.cpp -o general___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/general/uoconv.cpp -o uoconv.o /bin/rm -f libgeneral.so .libgeneral.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libgeneral.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC general__.o general___.o uoconv.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libgeneral.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libgeneral.so /bin/ln -f .general.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.general.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general' cd objects/biblio/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=biblio UNIX_PROJ="" sources= configurables=configurables.null cd objects/valid/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=valid UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/valid TMPL=valid -w -j4 --jobserver-auth=7,8 all /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio TMPL=biblio -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2__.cpp -o entrez2__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2___.cpp -o entrez2___.o /bin/rm -f libentrez2.so .libentrez2.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libentrez2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC entrez2__.o entrez2___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libentrez2.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libentrez2.so /bin/ln -f .entrez2.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.entrez2.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' cd objects/entrez2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=entrez2cli UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[4]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/valid/valid__.cpp:3: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/valid/Comment_set.cpp: In static member function ‘static std::vector > ncbi::objects::CComment_set::GetFieldNames(const string&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/valid/Comment_set.cpp:158:18: warning: catching polymorphic type ‘class ncbi::CException’ by value [-Wcatch-value=] } catch (CException ) { ^~~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/entrez2 TMPL=entrez2cli -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/gbseq/gbseq__.cpp -o gbseq__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o /bin/rm -f libgbseq.so .libgbseq.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libgbseq.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC gbseq__.o gbseq___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libgbseq.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libgbseq.so /bin/ln -f .gbseq.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.gbseq.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2_client.cpp -o entrez2_client.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/entrez2/entrez2_client_.cpp -o entrez2_client_.o /bin/rm -f libentrez2cli.so .libentrez2cli.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libentrez2cli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC entrez2_client.o entrez2_client_.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lentrez2 -lxconnect -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2cli.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libentrez2cli.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libentrez2cli.so /bin/ln -f .entrez2cli.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.entrez2cli.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/valid/valid__.cpp -o valid__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/valid/valid___.cpp -o valid___.o /bin/rm -f libvalid.so .libvalid.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libvalid.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC valid__.o valid___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lgeneral -lxser -lxregexp -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvalid.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libvalid.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libvalid.so /bin/ln -f .valid.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.valid.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio__.cpp -o biblio__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/biblio___.cpp -o biblio___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/biblio/citation_base.cpp -o citation_base.o /bin/rm -f libbiblio.so .libbiblio.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libbiblio.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC biblio__.o biblio___.o citation_base.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lgeneral -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libbiblio.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libbiblio.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libbiblio.so /bin/ln -f .biblio.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.biblio.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio' cd objects/medline/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medline UNIX_PROJ="" sources= configurables=configurables.null cd objects/medlars/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=medlars UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline TMPL=medline -w -j4 --jobserver-auth=7,8 all /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medlars TMPL=medlars -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars__.cpp -o medlars__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medlars/medlars___.cpp -o medlars___.o /bin/rm -f libmedlars.so .libmedlars.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libmedlars.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC medlars__.o medlars___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lbiblio -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedlars.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libmedlars.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libmedlars.so /bin/ln -f .medlars.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.medlars.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline/medline__.cpp -o medline__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/medline/medline___.cpp -o medline___.o /bin/rm -f libmedline.so .libmedline.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libmedline.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC medline__.o medline___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lbiblio -lgeneral -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedline.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libmedline.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libmedline.so /bin/ln -f .medline.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.medline.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline' cd objects/pub/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pub UNIX_PROJ="" sources= configurables=configurables.null cd objects/pubmed/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=pubmed UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub TMPL=pub -w -j4 --jobserver-auth=7,8 all /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pubmed TMPL=pubmed -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed__.cpp -o pubmed__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pubmed/pubmed___.cpp -o pubmed___.o /bin/rm -f libpubmed.so .libpubmed.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libpubmed.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC pubmed__.o pubmed___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lmedline -lbiblio -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpubmed.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libpubmed.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libpubmed.so /bin/ln -f .pubmed.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.pubmed.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub/pub__.cpp -o pub__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/pub/pub___.cpp -o pub___.o /bin/rm -f libpub.so .libpub.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libpub.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC pub__.o pub___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lmedline -lbiblio -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpub.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libpub.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libpub.so /bin/ln -f .pub.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.pub.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub' cd objects/seq/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seq UNIX_PROJ="" sources= configurables=configurables.null cd objects/mla/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mla UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq TMPL=seq -w -j4 --jobserver-auth=7,8 all /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/mla TMPL=mla -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2, from seqfeat__.cpp:1: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seq/Align_def.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/Align_def.cpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq__.cpp:2: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:9, from seqalign__.cpp:1: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp: In member function ‘void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:1381:69: warning: ‘void ncbi::objects::CDense_seg::RemapToLoc(ncbi::objects::CDense_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)’ is deprecated [-Wdeprecated-declarations] SetSegs().SetDenseg().RemapToLoc(row, dst_loc, ignore_strand); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:3, from seqalign__.cpp:1: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Dense_seg.cpp:909:6: note: declared here void CDense_seg::RemapToLoc(TDim row, const CSeq_loc& loc, ^~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:9, from seqalign__.cpp:1: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:1385:62: warning: ‘void ncbi::objects::CStd_seg::RemapToLoc(ncbi::objects::CStd_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)’ is deprecated [-Wdeprecated-declarations] (*std_it)->RemapToLoc(row, dst_loc, ignore_strand); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:9, from seqalign__.cpp:1: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Std_seg.hpp:79:26: note: declared here NCBI_DEPRECATED void RemapToLoc(TDim row, ^~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/seqalign__.cpp:9, from seqalign__.cpp:1: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:1390:68: warning: ‘void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)’ is deprecated [-Wdeprecated-declarations] (*seq_align_it)->RemapToLoc(row, dst_loc, ignore_strand); ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqalign/Seq_align.cpp:1364:6: note: declared here void CSeq_align::RemapToLoc(TDim row, ^~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:30, from seqfeat__.cpp:1: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp: In static member function ‘static bool ncbi::objects::CPCRPrimerSeq::Fixi(std::__cxx11::string&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp:249:72: warning: ‘static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)’ is deprecated [-Wdeprecated-declarations] pos = NStr::Find(seq, "i", pos, NPOS, NStr::eFirst, NStr::eCase); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2, from seqfeat__.cpp:1: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:5473:11: note: declared here SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, ^~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:30, from seqfeat__.cpp:1: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/PCRPrimerSeq.cpp:249:72: warning: ‘static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)’ is deprecated [-Wdeprecated-declarations] pos = NStr::Find(seq, "i", pos, NPOS, NStr::eFirst, NStr::eCase); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2, from seqfeat__.cpp:1: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:5473:11: note: declared here SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, ^~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:42, from seqfeat__.cpp:1: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function ‘ncbi::CTempString ncbi::objects::s_AaName(int)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:124:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] if (idx > 0 && idx < ArraySize(sc_TrnaList)) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/mla/mla__.cpp -o mla__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/mla/mla___.cpp -o mla___.o /bin/rm -f libmla.so .libmla.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libmla.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC mla__.o mla___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lmedlars -lpub -lpubmed -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmla.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libmla.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libmla.so /bin/ln -f .mla.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.mla.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' cd objects/mla/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=mlacli UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/mla TMPL=mlacli -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/BinomialOrgName.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName.cpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:2, from seqfeat__.cpp:1: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp: At global scope: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp:246:69: note: in expansion of macro ‘THROWS’ CRef CSubSource::DateFromCollectionDate (const string& test) THROWS((CException)) ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:48, from seqfeat__.cpp:1: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp: In static member function ‘static void ncbi::objects::CSubSource::IsCorrectDateFormat(const string&, bool&, bool&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp:446:14: warning: catching polymorphic type ‘class ncbi::CException’ by value [-Wcatch-value=] } catch (CException ) { ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp: In static member function ‘static size_t ncbi::objects::CSubSource::CheckDateFormat(const string&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp:468:22: warning: catching polymorphic type ‘class ncbi::CException’ by value [-Wcatch-value=] } catch (CException) { ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/SubSource.cpp:498:14: warning: catching polymorphic type ‘class ncbi::CException’ by value [-Wcatch-value=] } catch (CException) { ^~~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq__.cpp -o seq__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include seqalign__.cpp -o seqalign__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include seqblock__.cpp -o seqblock__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include seqfeat__.cpp -o seqfeat__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include seqloc__.cpp -o seqloc__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blmake[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/mla/mla_client.cpp -o mla_client.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/mla/mla_client_.cpp -o mla_client_.o /bin/rm -f libmlacli.so .libmlacli.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libmlacli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC mla_client.o mla_client_.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lmla -lxconnect -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmlacli.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libmlacli.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libmlacli.so /bin/ln -f .mlacli.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.mlacli.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/Align_def_.cpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq___.cpp:2: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ ast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include seqres__.cpp -o seqres__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include seqtable__.cpp -o seqtable__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq___.cpp -o seq___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include seqalign___.cpp -o seqalign___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include seqblock___.cpp -o seqblock___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include seqfeat___.cpp -o seqfeat___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbiIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/BinomialOrgName_.cpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/../seqfeat/seqfeat___.cpp:2, from seqfeat___.cpp:1: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_tree.cpp: In member function ‘virtual void ncbi::objects::CSeq_id_Giim_Tree::FindMatchStr(const string&, ncbi::objects::CSeq_id_Which_Tree::TSeq_id_MatchList&) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_tree.cpp:2432:12: warning: catching polymorphic type ‘class ncbi::CStringException’ by value [-Wcatch-value=] catch (CStringException) { ^~~~~~~~~~~~~~~~ -blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include seqloc___.cpp -o seqloc___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include seqres___.cpp -o seqres___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include seqtable___.cpp -o seqtable___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seqport_util.cpp -o seqport_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_tree.cpp -o seq_id_tree.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_handle.cpp -o seq_id_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/sr/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp: In member function ‘void ncbi::objects::CSeq_align_Mapper_Base::x_GetDstStd(ncbi::CRef&) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp:1505:32: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] if ( row_n == p_row ) { ~~~~~~^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp: In member function ‘void ncbi::objects::CSeq_align_Mapper_Base::x_GetDstDisc(ncbi::CRef&) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp:1651:16: warning: catching polymorphic type ‘class ncbi::objects::CAnnotMapperException’ by value [-Wcatch-value=] catch (CAnnotMapperException) { ^~~~~~~~~~~~~~~~~~~~~ c/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_id_mapper.cpp -o seq_id_mapper.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_mapper_base.cpp -o seq_loc_mapper_base.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_align_mapper_base.cpp -o seq_align_mapper_base.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seqlocinfo.cpp -o seqlocinfo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/sofa_map.cpp -o sofa_map.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/so_map.cpp -o so_map.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_from_string.cpp -o seq_loc_from_string.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seq/seq_loc_reverse_complementer.cpp -o seq_loc_reverse_complementer.o /bin/rm -f libseq.so .libseq.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libseq.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq__.o seqalign__.o seqblock__.o seqfeat__.o seqloc__.o seqres__.o seqtable__.o seq___.o seqalign___.o seqblock___.o seqfeat___.o seqloc___.o seqres___.o seqtable___.o seqport_util.o seq_id_tree.o seq_id_handle.o seq_id_mapper.o seq_loc_mapper_base.o seq_align_mapper_base.o seqlocinfo.o sofa_map.o so_map.o seq_loc_from_string.o seq_loc_reverse_complementer.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqcode -lpub -lbiblio -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseq.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libseq.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libseq.so /bin/ln -f .seq.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.seq.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' cd objects/seqset/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqset UNIX_PROJ="" sources= configurables=configurables.null cd objects/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb UNIX_PROJ="" sources= configurables=configurables.null cd objects/genomecoll/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd objects/variation/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll TMPL=genome_collection -w -j4 --jobserver-auth=7,8 all /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastdb TMPL=blastdb -w -j4 --jobserver-auth=7,8 all make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/variation TMPL=variation -w -j4 --jobserver-auth=7,8 all /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset TMPL=seqset -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/genomecoll/GC_Assemblies_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/genomecoll/GC_Assemblies.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/GC_Assemblies.cpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection__.cpp:2: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/variation/VariantPlacement_.cpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/variation/variation___.cpp:2: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastdb/blastdb__.cpp -o blastdb__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blastdb/blastdb___.cpp -o blastdb___.o /bin/rm -f libblastdb.so .libblastdb.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libblastdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastdb__.o blastdb___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseq -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libblastdb.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastdb.so /bin/ln -f .blastdb.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.blastdb.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb' cd objects/taxon1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1 TMPL=taxon1 -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialdef.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/impl/typeref.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serial.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1/cache.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/variation/variation__.cpp -o variation__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/variation/variation___.cpp -o variation___.o /bin/rm -f libvariation.so .libvariation.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libvariation.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC variation__.o variation___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libvariation.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libvariation.so /bin/ln -f .variation.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.variation.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation' cd objects/taxon3/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=taxon3 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon3 TMPL=taxon3 -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset__.cpp -o seqset__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset/seqset___.cpp -o seqset___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqset/gb_release_file.cpp -o gb_release_file.o /bin/rm -f libseqset.so .libseqset.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libseqset.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqset__.o seqset___.o gb_release_file.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseq -lseqcode -lsequtil -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqset.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libseqset.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqset.so /bin/ln -f .seqset.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.seqset.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset' cd objects/scoremat/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=scoremat UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/scoremat TMPL=scoremat -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection__.cpp -o genome_collection__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/genomecoll/genome_collection___.cpp -o genome_collection___.o /bin/rm -f libgenome_collection.so .libgenome_collection.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libgenome_collection.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC genome_collection__.o genome_collection___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgenome_collection.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libgenome_collection.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libgenome_collection.so /bin/ln -f .genome_collection.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.genome_collection.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' cd objects/seqedit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqedit TMPL=seqedit -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/taxon3/SequenceOfInt_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/taxon3/SequenceOfInt.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon3/SequenceOfInt.cpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3__.cpp:2: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialimpl.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon3/SequenceOfInt_.cpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3___.cpp:2: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1/utils.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat__.cpp -o scoremat__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o /bin/rm -f libscoremat.so .libscoremat.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libscoremat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC scoremat__.o scoremat___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libscoremat.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libscoremat.so /bin/ln -f .scoremat.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.scoremat.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat' cd objects/seqsplit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqsplit TMPL=seqsplit -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1__.cpp -o taxon1__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1___.cpp -o taxon1___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1/taxon1.cpp -o taxon1.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1/cache.cpp -o cache.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1/utils.cpp -o utils.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o /bin/rm -f libtaxon1.so .libtaxon1.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libtaxon1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libtaxon1.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libtaxon1.so /bin/ln -f .taxon1.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.taxon1.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1' cd objects/submit/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/submit TMPL=submit -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3__.cpp -o taxon3__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3___.cpp -o taxon3___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/taxon3/taxon3.cpp -o taxon3.o /bin/rm -f libtaxon3.so .libtaxon3.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libtaxon3.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC taxon3__.o taxon3___.o taxon3.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libtaxon3.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libtaxon3.so /bin/ln -f .taxon3.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.taxon3.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3' cd objects/id1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id1 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id1 TMPL=id1 -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqedit/seqedit__.cpp -o seqedit__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o /bin/rm -f libseqedit.so .libseqedit.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libseqedit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqedit__.o seqedit___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libseqedit.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqedit.so /bin/ln -f .seqedit.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.seqedit.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit' cd objects/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blast TMPL=blast -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/submit/submit__.cpp -o submit__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/submit/submit___.cpp -o submit___.o /bin/rm -f libsubmit.so .libsubmit.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libsubmit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC submit__.o submit___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lbiblio -lgeneral -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsubmit.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libsubmit.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libsubmit.so /bin/ln -f .submit.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.submit.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit' cd objtools/readers/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjread UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id1/id1__.cpp -o id1__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id1/id1___.cpp -o id1___.o /bin/rm -f libid1.so .libid1.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libid1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC id1__.o id1___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libid1.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libid1.so /bin/ln -f .id1.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.id1.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers TMPL=xobjread -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp: In function ‘ncbi::CRef ncbi::AgpRead(ncbi::CNcbiIstream&, ncbi::EAgpRead_IdRule, bool, std::vector >*)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:58:74: warning: ‘void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector >&, ncbi::EAgpRead_IdRule, bool, std::vector >*)’ is deprecated [-Wdeprecated-declarations] AgpRead(is, entries, component_id_rule, set_gap_data, component_types); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:61:6: note: declared here void AgpRead(CNcbiIstream& is, ^~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:58:74: warning: ‘void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector >&, ncbi::EAgpRead_IdRule, bool, std::vector >*)’ is deprecated [-Wdeprecated-declarations] AgpRead(is, entries, component_id_rule, set_gap_data, component_types); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:61:6: note: declared here void AgpRead(CNcbiIstream& is, ^~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp: In function ‘void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector >&, ncbi::EAgpRead_IdRule, bool, std::vector >*)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:74:74: warning: ‘void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector >&, ncbi::EAgpRead_IdRule, bool, std::vector >*)’ is deprecated [-Wdeprecated-declarations] AgpRead(is, bioseqs, component_id_rule, set_gap_data, component_types); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:52:6: note: declared here void AgpRead(CNcbiIstream& is, ^~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:74:74: warning: ‘void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector >&, ncbi::EAgpRead_IdRule, bool, std::vector >*)’ is deprecated [-Wdeprecated-declarations] AgpRead(is, bioseqs, component_id_rule, set_gap_data, component_types); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/agp_read.hpp:52:6: note: declared here void AgpRead(CNcbiIstream& is, ^~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/format_guess_ex.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit__.cpp -o seqsplit__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o /bin/rm -f libseqsplit.so .libseqsplit.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libseqsplit.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqsplit__.o seqsplit___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqsplit.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libseqsplit.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqsplit.so /bin/ln -f .seqsplit.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.seqsplit.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit' cd objmgr/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=objmgr UNIX_PROJ="" sources= configurables=configurables.null cd objects/id2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr TMPL=objmgr -w -j4 --jobserver-auth=7,8 all /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id2 TMPL=id2 -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/read_util.cpp -o read_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/format_guess_ex.cpp -o format_guess_ex.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/acc_pattern.cpp -o acc_pattern.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_read.cpp -o agp_read.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_seq_entry.cpp -o agp_seq_entry.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_util.cpp -o agp_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_O/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_validate_reader.cpp: In member function ‘virtual void ncbi::CAgpValidateReader::OnObjectChange()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_validate_reader.cpp:562:28: warning: catching polymorphic type ‘class ncbi::CException’ by value [-Wcatch-value=] catch(CException e){ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/objmgr_exception.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_setters.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_table_info.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_info.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_table_info.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/table_field.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/impl/seq_annot_info.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_info.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/aln_reader.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp: In member function ‘bool ncbi::CAlnReader::x_IsGap(ncbi::CAlnReader::TNumrow, ncbi::TSeqPos, const string&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp:409:13: warning: comparison of integer expressions of different signedness: ‘ncbi::CAlnReader::TNumrow’ {aka ‘int’} and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] if (row > m_MiddleSections.size()) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/bed_reader.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_setters.cpp -o seq_table_setters.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_info.cpp -o seq_table_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_info.cpp -o seq_annot_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/table_field.cpp -o table_field.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map_switch.cpp -o seq_map_switch.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/snp_annot_info.cpp -o snp_annot_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id2/id2__.cpp -o id2__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/id2/id2___.cpp -o id2___.o /bin/rm -f libid2.so .libid2.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libid2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC id2__.o id2___.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqsplit -lseq -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libid2.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libid2.so /bin/ln -f .id2.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.id2.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blast/blast__.cpp -o blast__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blast/blast___.cpp -o blast___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blast/names.cpp -o names.o /bin/rm -f libxnetblast.so .libxnetblast.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxnetblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast__.o blast___.o names.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lscoremat -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblast.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxnetblast.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxnetblast.so /bin/ln -f .xnetblast.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xnetblast.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' cd objects/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xnetblastcli UNIX_PROJ="" sources= configurables=configurables.null cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_unit_test_util UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blast TMPL=xnetblastcli -w -j4 --jobserver-auth=7,8 all /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ FFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_validate_reader.cpp -o agp_validate_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/aln_reader.cpp -o aln_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/bed_reader.cpp -o bed_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/cigar.cpp -o cigar.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp -o fasta.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_aln_builder.cpp -o fasta_aln_builder.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_reader_utils.cpp -o fasta_reader_utils.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_reader_utils.cpp:38: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In constructor ‘ncbi::objects::CFastaReader::CFastaReader(ncbi::ILineReader&, ncbi::objects::CFastaReader::TFlags)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: ‘ncbi::objects::CFastaReader::m_ExpectedEnd’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here NCBI_DEPRECATED TSeqPos m_ExpectedEnd; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:224:29: warning: ‘ncbi::objects::CFastaReader::m_ExpectedEnd’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here NCBI_DEPRECATED TSeqPos m_ExpectedEnd; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In constructor ‘ncbi::objects::CFastaReader::CFastaReader(ncbi::CNcbiIstream&, ncbi::objects::CFastaReader::TFlags)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: ‘ncbi::objects::CFastaReader::m_ExpectedEnd’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here NCBI_DEPRECATED TSeqPos m_ExpectedEnd; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:234:29: warning: ‘ncbi::objects::CFastaReader::m_ExpectedEnd’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here NCBI_DEPRECATED TSeqPos m_ExpectedEnd; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In constructor ‘ncbi::objects::CFastaReader::CFastaReader(const string&, ncbi::objects::CFastaReader::TFlags)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: ‘ncbi::objects::CFastaReader::m_ExpectedEnd’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here NCBI_DEPRECATED TSeqPos m_ExpectedEnd; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:244:29: warning: ‘ncbi::objects::CFastaReader::m_ExpectedEnd’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here NCBI_DEPRECATED TSeqPos m_ExpectedEnd; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In constructor ‘ncbi::objects::CFastaReader::CFastaReader(ncbi::objects::CReaderBase::TReaderFlags, ncbi::objects::CFastaReader::TFlags)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: ‘ncbi::objects::CFastaReader::m_ExpectedEnd’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here NCBI_DEPRECATED TSeqPos m_ExpectedEnd; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:254:29: warning: ‘ncbi::objects::CFastaReader::m_ExpectedEnd’ is deprecated [-Wdeprecated-declarations] m_MaxIDLength(kMax_UI4) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here NCBI_DEPRECATED TSeqPos m_ExpectedEnd; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In destructor ‘virtual ncbi::objects::CFastaReader::~CFastaReader()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:260:33: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] CFastaReader::~CFastaReader(void) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:260:33: warning: ‘ncbi::objects::CFastaReader::m_IDGenerator’ is deprecated [-Wdeprecated-declarations] CFastaReader::~CFastaReader(void) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:372:45: note: declared here NCBI_DEPRECATED CRef m_IDGenerator; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp: In member function ‘virtual void ncbi::objects::CFastaReader::ParseDefLine(const TStr&, ncbi::objects::ILineErrorListener*)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:621:9: warning: ‘ncbi::objects::CFastaReader::m_ExpectedEnd’ is deprecated [-Wdeprecated-declarations] m_ExpectedEnd = range_end - range_start; ^~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here NCBI_DEPRECATED TSeqPos m_ExpectedEnd; ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:621:9: warning: ‘ncbi::objects::CFastaReader::m_ExpectedEnd’ is deprecated [-Wdeprecated-declarations] m_ExpectedEnd = range_end - range_start; ^~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:377:29: note: declared here NCBI_DEPRECATED TSeqPos m_ExpectedEnd; ^~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Na_strand.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blast/blastclient.cpp -o blastclient.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o /bin/rm -f libxnetblastcli.so .libxnetblastcli.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxnetblastcli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastclient.o blastclient_.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxnetblast -lxconnect -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxnetblastcli.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxnetblastcli.so /bin/ln -f .xnetblastcli.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xnetblastcli.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqalign_util UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:227:5: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)) ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiutil.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/gff_reader.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff_reader.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp -o seqalign_cmp.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp -o seqalign_set_convert.o /bin/rm -f libseqalign_util.a .libseqalign_util.a.stamp ar cr libseqalign_util.a seqalign_cmp.o seqalign_set_convert.o /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqalign_util.a /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libseqalign_util.a /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqalign_util.a /bin/ln -f .seqalign_util.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.seqalign_util.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blast_app_util -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp -o test_objmgr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp -o blast_test_util.o /bin/rm -f libblast_unit_test_util.a .libblast_unit_test_util.a.stamp ar cr libblast_unit_test_util.a test_objmgr.o blast_test_util.o /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_unit_test_util.a /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libblast_unit_test_util.a /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libblast_unit_test_util.a /bin/ln -f .blast_unit_test_util.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.blast_unit_test_util.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd objtools/blast/services/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blast_services UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/services TMPL=blast_services -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/annot_types_ci.cpp -o annot_types_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_loc_cvt.cpp -o seq_loc_cvt.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/annot_selector.cpp -o annot_selector.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_descr_ci.cpp -o seq_descr_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/feat_ci.cpp -o feat_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/graph_ci.cpp -o graph_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/annot_object.cpp -o annot_object.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compilIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/microarray_reader.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/getfeature.cpp -o getfeature.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff_reader.cpp -o gff_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/track_data.cpp -o track_data.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_data.cpp -o reader_data.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/microarray_reader.cpp -o microarray_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/phrap.cpp -o phrap.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o /bin/rm -f libblast_services.so .libblast_services.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libblast_services.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast_services.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxnetblastcli -lxnetblast -lxser -lxconnect -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libblast_services.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libblast_services.so /bin/ln -f .blast_services.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.blast_services.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services' In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp: In member function ‘virtual bool ncbi::objects::CReaderBase::xIsTrackTerminator(const ncbi::CTempString&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:652:45: warning: ‘static ncbi::CTempString ncbi::NStr::TruncateSpaces(ncbi::CTempString, ncbi::NStr::ETrunc)’ is deprecated [-Wdeprecated-declarations] auto line = NStr::TruncateSpaces(strLine); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2214:24: note: declared here static CTempString TruncateSpaces(const CTempString str, ^~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:652:45: warning: ‘static ncbi::CTempString ncbi::NStr::TruncateSpaces(ncbi::CTempString, ncbi::NStr::ETrunc)’ is deprecated [-Wdeprecated-declarations] auto line = NStr::TruncateSpaces(strLine); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2214:24: note: declared here static CTempString TruncateSpaces(const CTempString str, ^~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp: In member function ‘bool ncbi::objects::CFeature_table_reader_imp::x_AddQualifierToCdregion(ncbi::CRef, ncbi::objects::CSeqFeatData&, ncbi::objects::CFeature_table_reader_imp::EQual, const string&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp:1245:22: warning: catching polymorphic type ‘class ncbi::CStringException’ by value [-Wcatch-value=] } catch( CStringException ) { ^~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp: In member function ‘void ncbi::objects::CFeature_table_reader_imp::x_InitId(const string&, ncbi::objects::CFeature_table_reader::TFlags)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp:3310:46: warning: enum constant in boolean context [-Wint-in-bool-context] (flags && CFeature_table_reader::fAllIdsAsLocal) ? CSeq_id::fParse_AnyLocal:CSeq_id::fParse_Default); ^~~~~~~~~~~~~~ e.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/annot_object_index.cpp -o annot_object_index.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/annot_ci.cpp -o annot_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/tse_info.cpp -o tse_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/tse_info_object.cpp -o tse_info_object.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_info.cpp -o seq_entry_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_base_info.cpp -o bioseq_base_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_info.cpp -o bioseq_set_info.o In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp: In member function ‘ncbi::CRef ncbi::objects::CRepeatToFeat::operator()(const ncbi::objects::IRepeatRegion&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp:551:44: warning: enum constant in boolean context [-Wint-in-bool-context] if (fRemoveRedundancy && m_Library && ^~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/blast_app_util.cpp -o blast_app_util.o /bin/rm -f libblast_app_util.a .libblast_app_util.a.stamp ar cr libblast_app_util.a blast_app_util.o /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libblast_app_util.a /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libblast_app_util.a /bin/ln -f .blast_app_util.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.blast_app_util.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_base_info.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/impl/bioseq_info.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_info.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/reader_base.cpp -o reader_base.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/readfeat.cpp -o readfeat.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/rm_reader.cpp -o rm_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/wiggle_reader.cpp -o wiggle_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_sofa.cpp -o gff3_sofa.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp -o gff3_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp -o gtf_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-securitIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp: In member function ‘virtual bool ncbi::objects::CGff3Reader::xUpdateAnnotGeneric(const ncbi::objects::CGff2Record&, ncbi::CRef, ncbi::CRef, ncbi::objects::ILineErrorListener*)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff3_reader.cpp:603:10: warning: unused variable ‘st’ [-Wunused-variable] auto st = pFeature->GetData().GetSubtype(); ^~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp: In member function ‘virtual bool ncbi::objects::CGtfReader::x_UpdateAnnotCds(const ncbi::objects::CGff2Record&, ncbi::CRef)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gtf_reader.cpp:363:10: warning: variable ‘needXref’ set but not used [-Wunused-but-set-variable] bool needXref = false; ^~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_data.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_info.cpp -o bioseq_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/data_source.cpp -o data_source.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/priority.cpp -o priority.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_impl.cpp -o prefetch_impl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_manager.cpp -o prefetch_manager.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_manager_impl.cpp -o prefetch_manager_impl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blasIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function ‘virtual ncbi::CRef ncbi::objects::CGff2Reader::ReadSeqAnnot(ncbi::ILineReader&, ncbi::objects::ILineErrorListener*)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:217:30: warning: enum constant in boolean context [-Wint-in-bool-context] if ((m_iFlags && fGenbankMode) || ^~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function ‘virtual void ncbi::objects::CGff2Reader::xPostProcessAnnot(ncbi::CRef&, ncbi::objects::ILineErrorListener*)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:323:23: warning: enum constant in boolean context [-Wint-in-bool-context] if (!(m_iFlags && fGenbankMode)) { ^~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp: In member function ‘bool ncbi::objects::CGff2Reader::xGetStartsOnPlusStrand(ncbi::TSeqPos, const std::vector >&, bool, std::vector&) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:1195:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] for (auto i=0; i >&, ncbi::objects::ENa_strand, ncbi::objects::ENa_strand, ncbi::TSeqPos, ncbi::TSeqPos, const ncbi::objects::CGff2Record&, ncbi::objects::CSeq_align_Base::C_Segs::TDenseg&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:1282:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] for (auto i=0; i)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp:1369:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] for (auto i=0; i DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ y -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_data.cpp -o gff2_data.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gff2_reader.cpp -o gff2_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/gvf_reader.cpp -o gvf_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/vcf_reader.cpp -o vcf_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/best_feat_finder.cpp -o best_feat_finder.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/source_mod_parser.cpp -o source_mod_parser.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/fasta_exception.cpp -o fasta_exception.oIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/source_mod_parser.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/source_mod_parser.cpp:38: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ t+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/prefetch_actions.cpp -o prefetch_actions.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/scope.cpp -o scope.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/heap_scope.cpp -o heap_scope.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/scope_impl.cpp -o scope_impl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/scope_info.cpp -o scope_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/tse_handle.cpp -o tse_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map.cpp -o seq_map.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=6In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_converter.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/ucscregion_reader.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/agp_converter.cpp -o agp_converter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/ucscregion_reader.cpp -o ucscregion_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/struct_cmt_reader.cpp -o struct_cmt_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/message_listener.cpp -o message_listener.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/readers/line_error.cpp -o line_error.o /bin/rm -f libxobjread.so .libxobjread.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxobjread.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC read_util.o format_guess_ex.o acc_pattern.o agp_read.o agp_seq_entry.o agp_util.o agp_validate_reader.o aln_reader.o bed_reader.o cigar.o fasta.o fasta_aln_builder.o fasta_reader_utils.o getfeature.o gff_reader.o track_data.o reader_data.o microarray_reader.o phrap.o reader_base.o readfeat.o rm_reader.o wiggle_reader.o gff3_sofa.o gff3_reader.o gtf_reader.o gff2_data.o gff2_reader.o gvf_reader.o vcf_reader.o best_feat_finder.o source_mod_parser.o fasta_exception.o agp_converter.o ucscregion_reader.o struct_cmt_reader.o message_listener.o line_error.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lsubmit -lseqset -lseq -lseqcode -lsequtil -lgeneral -lcreaders -lxutil -lpub -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxobjread.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxobjread.so /bin/ln -f .xobjread.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xobjread.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' 4 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_map_ci.cpp -o seq_map_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_ci.cpp -o seq_entry_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_ci.cpp -o seq_annot_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_table_ci.cpp -o seq_table_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_handle.cpp -o seq_entry_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_handle.cpp -o bioseq_set_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_handle.cpp -o bioseq_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_annot_handle.cpp -o seq_annot_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include 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-D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/handle_range.cpp -o handle_range.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/objmgr_exception.cpp -o objmgr_exception.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/handle_range_map.cpp -o handle_range_map.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/object_manager.cpp -o object_manager.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_vector.cpp -o seq_vector.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_vector_ci.cpp -o seq_vector_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seqdesc_ci.cpp -o seqdesc_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/tse_split_info.cpp -o tse_split_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/tse_chunk_info.cpp -o tse_chunk_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_ci.cpp -o bioseq_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/builIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/impl/annot_collector.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/annot_collector.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ d/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/annot_type_index.cpp -o annot_type_index.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_loc_mapper.cpp -o seq_loc_mapper.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_align_mapper.cpp -o seq_align_mapper.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/annot_collector.cpp -o annot_collector.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/data_loader_factory.cpp -o data_loader_factory.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/mapped_feat.cpp -o mapped_feat.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_feat_handle.cpp -o seq_feat_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_graph_handle.cpp -o seq_graph_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_align_handle.cpp -o seq_align_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/tse_assigner.cpp -o tse_assigner.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/scope_transaction.cpp -o scope_transaction.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/scope_transaction_impl.cpp -o scope_transaction_impl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/edit_commands_impl.cpp -o edit_commands_impl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_edit_commands.cpp -o bioseq_edit_commands.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_entry_edit_commands.cpp -o seq_entry_edit_commands.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/bioseq_set_edit_commands.cpp -o bioseq_set_edit_commands.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/edit_saver.cpp -o edit_saver.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/unsupp_editsaver.cpp -o unsupp_editsaver.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/edits_db_engine.cpp -o edits_db_engine.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/edits_db_saver.cpp -o edits_db_saver.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/annot_finder.cpp -o annot_finder.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/gc_assembly_parser.cpp -o gc_assembly_parser.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/split_parser.cpp -o split_parser.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/seq_id_sort.cpp -o seq_id_sort.o /bin/rm -f libxobjmgr.so .libxobjmgr.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxobjmgr.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq_table_setters.o seq_table_info.o seq_annot_info.o table_field.o seq_map_switch.o snp_annot_info.o annot_types_ci.o seq_loc_cvt.o annot_selector.o seq_descr_ci.o feat_ci.o graph_ci.o annot_object.o annot_object_index.o annot_ci.o tse_info.o tse_info_object.o seq_entry_info.o bioseq_base_info.o bioseq_set_info.o bioseq_info.o data_source.o priority.o prefetch_impl.o prefetch_manager.o prefetch_manager_impl.o prefetch_actions.o scope.o heap_scope.o scope_impl.o scope_info.o tse_handle.o seq_map.o seq_map_ci.o seq_entry_ci.o seq_annot_ci.o seq_table_ci.o seq_entry_handle.o bioseq_set_handle.o bioseq_handle.o seq_annot_handle.o align_ci.o data_loader.o handle_range.o objmgr_exception.o handle_range_map.o object_manager.o seq_vector.o seq_vector_ci.o seqdesc_ci.o tse_split_info.o tse_chunk_info.o bioseq_ci.o annot_type_index.o seq_loc_mapper.o seq_align_mapper.o annot_collector.o data_loader_factory.o mapped_feat.o seq_feat_handle.o seq_graph_handle.o seq_align_handle.o tse_assigner.o scope_transaction.o scope_transaction_impl.o edit_commands_impl.o bioseq_edit_commands.o seq_entry_edit_commands.o bioseq_set_edit_commands.o edit_saver.o unsupp_editsaver.o edits_db_engine.o edits_db_saver.o annot_finder.o gc_assembly_parser.o split_parser.o seq_id_sort.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjmgr.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxobjmgr.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxobjmgr.so /bin/ln -f .xobjmgr.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xobjmgr.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr' cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqdb UNIX_PROJ="" sources= configurables=configurables.null cd objmgr/util/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null cd algo/dustmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgodustmask UNIX_PROJ="" sources= configurables=configurables.null cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask' make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j4 --jobserver-auth=7,8 all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util TMPL=util -w -j4 --jobserver-auth=7,8 all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/dustmask TMPL=xalgodustmask -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: In member function ‘char* ncbi::CSeqDBAtlas::Alloc(size_t, ncbi::CSeqDBLockHold&, bool)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:346:16: warning: catching polymorphic type ‘class std::bad_alloc’ by value [-Wcatch-value=] catch(std::bad_alloc) { ^~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: At global scope: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:160:13: warning: ‘void ncbi::s_SeqDB_FileNotFound(const string&)’ defined but not used [-Wunused-function] static void s_SeqDB_FileNotFound(const string & fname) ^~~~~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/util/unicode.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:32: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/objistr.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp: In function ‘void ncbi::objects::GetProteinWeights(const ncbi::objects::CBioseq_Handle&, ncbi::objects::TWeights&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp:362:18: warning: catching polymorphic type ‘class ncbi::objects::CObjmgrUtilException’ by value [-Wcatch-value=] } catch (CObjmgrUtilException) { ^~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp: In function ‘ncbi::CRef ncbi::objects::sequence::SourceToProduct(const ncbi::objects::CSeq_feat&, const ncbi::objects::CSeq_loc&, ncbi::objects::sequence::TS2PFlags, ncbi::objects::CScope*, int*)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:703:18: warning: catching polymorphic type ‘class ncbi::objects::CObjmgrUtilException’ by value [-Wcatch-value=] } catch (CObjmgrUtilException) { ^~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp: In function ‘ncbi::CRef ncbi::objects::sequence::ProductToSource(const ncbi::objects::CSeq_feat&, const ncbi::objects::CSeq_loc&, ncbi::objects::sequence::TP2SFlags, ncbi::objects::CScope*)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:746:18: warning: catching polymorphic type ‘class ncbi::objects::CObjmgrUtilException’ by value [-Wcatch-value=] } catch (CObjmgrUtilException) { ^~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:751:18: warning: catching polymorphic type ‘class ncbi::objects::CObjmgrUtilException’ by value [-Wcatch-value=] } catch (CObjmgrUtilException) { ^~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp: In function ‘ncbi::objects::feature::ELocationInFrame ncbi::objects::feature::IsLocationInFrame(const ncbi::objects::CSeq_feat_Handle&, const ncbi::objects::CSeq_loc&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:3391:89: warning: ‘ncbi::objects::sequence::ECompare ncbi::objects::sequence::Compare(const ncbi::objects::CSeq_loc&, const ncbi::objects::CSeq_loc&, ncbi::objects::CScope*)’ is deprecated [-Wdeprecated-declarations] sequence::ECompare cmp = sequence::Compare(cds.GetLocation(), loc, &(cds.GetScope())); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/feature.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:84: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/seq_loc_util.hpp:200:20: note: declared here sequence::ECompare Compare(const CSeq_loc& loc1, ^~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:3391:89: warning: ‘ncbi::objects::sequence::ECompare ncbi::objects::sequence::Compare(const ncbi::objects::CSeq_loc&, const ncbi::objects::CSeq_loc&, ncbi::objects::CScope*)’ is deprecated [-Wdeprecated-declarations] sequence::ECompare cmp = sequence::Compare(cds.GetLocation(), loc, &(cds.GetScope())); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/feature.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp:84: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/seq_loc_util.hpp:200:20: note: declared here sequence::ECompare Compare(const CSeq_loc& loc1, ^~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp: In member function ‘ncbi::CRef ncbi::objects::SRelLoc::Resolve(const ncbi::objects::CSeq_loc&, ncbi::objects::CScope*, ncbi::objects::SRelLoc::TFlags) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp:4578:22: warning: catching polymorphic type ‘class ncbi::objects::CObjmgrUtilException’ by value [-Wcatch-value=] } catch (CObjmgrUtilException) { ^~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdb.cpp -o seqdb.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp -o seqdbbitset.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp -o seqdbfilter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp -o seqdbatlas.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp -o seqdbalias.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp -o seqdbcommon.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/bumake[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/dustmask/symdust.cpp -o symdust.o /bin/rm -f libxalgodustmask.so .libxalgodustmask.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxalgodustmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC symdust.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxalgodustmask.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalgodustmask.so /bin/ln -f .xalgodustmask.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xalgodustmask.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask' cd algo/segmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgosegmask UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask' make[4]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp: In member function ‘void ncbi::objects::CBioseqIndex::x_InitFeats()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:1030:20: warning: variable ‘sgx’ set but not used [-Wunused-but-set-variable] CGapIndex* sgx = NULL; ^~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask' In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:42: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/indexer.hpp: In constructor ‘ncbi::objects::CGapIndex::CGapIndex(ncbi::TSeqPos, ncbi::TSeqPos, ncbi::TSeqPos, const string&, const std::vector >&, bool, bool, ncbi::objects::CBioseqIndex&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/indexer.hpp:576:10: warning: ‘ncbi::objects::CGapIndex::m_IsAssemblyGap’ will be initialized after [-Wreorder] bool m_IsAssemblyGap; ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/indexer.hpp:566:28: warning: ‘ncbi::CWeakRef ncbi::objects::CGapIndex::m_Bsx’ [-Wreorder] CWeakRef m_Bsx; ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:1362:1: warning: when initialized here [-Wreorder] CGapIndex::CGapIndex (TSeqPos start, ^~~~~~~~~ /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/segmask TMPL=xalgosegmask -w -j4 --jobserver-auth=7,8 all /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp: In function ‘int ncbi::objects::SkipMixedContent(const char*)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:1835:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] for (int i = 0; i < sizeof (mixedTags); i++) { ~~^~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp: In member function ‘void ncbi::objects::CWordPairIndexer::PopulateWordPairIndex(std::__cxx11::string)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp:1912:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] for (int i = 0; i < str.length(); i++) { ~~^~~~~~~~~~~~~~ make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/seqtitle.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/segmask/segmask.cpp -o segmask.o /bin/rm -f libxalgosegmask.so .libxalgosegmask.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxalgosegmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC segmask.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast -lxobjmgr -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgosegmask.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxalgosegmask.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalgosegmask.so /bin/ln -f .xalgosegmask.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xalgosegmask.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask' cd objmgr/split/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=id2_split UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/split TMPL=id2_split -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/dispatcher.cpp -o dispatcher.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader.cpp -o reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/writer.cpp -o writer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/processors.cpp -o processors.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_snp.cpp -o reader_snp.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/seqref.cpp -o seqref.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-semake[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter.cpp -o blob_splitter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_params.cpp -o blob_splitter_params.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/split/split_blob.cpp -o split_blob.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_impl.cpp -o blob_splitter_impl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_parser.cpp -o blob_splitter_parser.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_maker.cpp -o blob_splitter_maker.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=formatIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:46, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function ‘void ncbi::CSeqDBVol::GetRawSeqAndAmbig(int, const char**, int*, int*, ncbi::CSeqDBLockHold&) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:2623:11: warning: variable ‘map_end’ set but not used [-Wunused-but-set-variable] TIndx map_end = 0; ^~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/split/blob_splitter_impl.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/split/blob_splitter_maker.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/weight.cpp -o weight.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/sequence.cpp -o sequence.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature.cpp -o feature.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/indexer.cpp -o indexer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/seqtitle.cpp -o seqtitle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp -o create_defline.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In function ‘bool x_EndsWithStrain(const ncbi::CTempString&, const ncbi::CTempString&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1137:80: warning: ‘static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)’ is deprecated [-Wdeprecated-declarations] pos = NStr::FindNoCase (taxname, strain, 0, taxname.size() - 1, NStr::eLast); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here static SIZE_TYPE FindNoCase(const CTempString str, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1137:80: warning: ‘static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)’ is deprecated [-Wdeprecated-declarations] pos = NStr::FindNoCase (taxname, strain, 0, taxname.size() - 1, NStr::eLast); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here static SIZE_TYPE FindNoCase(const CTempString str, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In function ‘std::__cxx11::string s_RemoveBracketedOrgFromEnd(std::__cxx11::string, std::__cxx11::string)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1716:61: warning: ‘static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)’ is deprecated [-Wdeprecated-declarations] SIZE_TYPE cp = NStr::Find(str, "[", 0, NPOS, NStr::eLast); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:5473:11: note: declared here SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, ^~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1716:61: warning: ‘static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence, ncbi::NStr::ECase)’ is deprecated [-Wdeprecated-declarations] SIZE_TYPE cp = NStr::Find(str, "[", 0, NPOS, NStr::eLast); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:5473:11: note: declared here SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, ^~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In member function ‘void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProteinIdx(const ncbi::objects::CBioseq_Handle&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1782:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] if (offset > 0 && offset < m_MainTitle.length()) { ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In member function ‘void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProtein(const ncbi::objects::CBioseq_Handle&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:1980:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] if (offset > 0 && offset < m_MainTitle.length()) { ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In function ‘size_t s_TitleEndsInOrganism(std::__cxx11::string&, ncbi::CTempString)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2595:68: warning: ‘static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)’ is deprecated [-Wdeprecated-declarations] pos = NStr::FindNoCase(title, taxname, 0, NPOS, NStr::eLast); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here static SIZE_TYPE FindNoCase(const CTempString str, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2595:68: warning: ‘static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)’ is deprecated [-Wdeprecated-declarations] pos = NStr::FindNoCase(title, taxname, 0, NPOS, NStr::eLast); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here static SIZE_TYPE FindNoCase(const CTempString str, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2596:17: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] if (pos == idx + 2) { ~~~~^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In member function ‘void ncbi::objects::sequence::CDeflineGenerator::x_AdjustProteinTitleSuffix(const ncbi::objects::CBioseq_Handle&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2654:83: warning: ‘static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)’ is deprecated [-Wdeprecated-declarations] pos = NStr::FindNoCase(m_MainTitle, "][", 0, NPOS, NStr::eLast); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here static SIZE_TYPE FindNoCase(const CTempString str, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2654:83: warning: ‘static ncbi::SIZE_TYPE ncbi::NStr::FindNoCase(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, ncbi::NStr::EOccurrence)’ is deprecated [-Wdeprecated-declarations] pos = NStr::FindNoCase(m_MainTitle, "][", 0, NPOS, NStr::eLast); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/util/strsearch.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/create_defline.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:2082:22: note: declared here static SIZE_TYPE FindNoCase(const CTempString str, ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp: In member function ‘std::__cxx11::string ncbi::objects::sequence::CDeflineGenerator::GenerateDefline(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::CDeflineGenerator::TUserFlags)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/create_defline.cpp:2981:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] for (int i = 0; i < sizeof (s_tpaPrefixList) / sizeof (const char*); i++) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ curity -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/blob_id.cpp -o blob_id.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/request_result.cpp -o request_result.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp -o reader_id1_base.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp -o reader_id2_base.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader_service.cpp -o reader_service.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/incr_time.cpp -o incr_time.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-ild/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp -o seqdbfile.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp -o seqdbimpl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp -o seqdbvol.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp -o seqdbvolset.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp -o seqdboidlist.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp -o seqdbisam.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function ‘ncbi::CSeqDBIsam::EErrorCode ncbi::CSeqDBIsam::x_StringSearch(const string&, std::vector >&, std::vector >&, std::vector&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:1001:9: warning: variable ‘found_short’ set but not used [-Wunused-but-set-variable] int found_short(-1); ^~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_align_util.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp: In function ‘bool ncbi::objects::sequence::BadSeqLocSortOrder(const ncbi::objects::CBioseq_Handle&, const ncbi::objects::CSeq_loc&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp:605:14: warning: catching polymorphic type ‘class ncbi::CException’ by value [-Wcatch-value=] } catch (CException) { ^~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_trimmer.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ _BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp -o seqdbtax.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp -o seqdbgilistset.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp -o seqdbexpert.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp -o seqdbblob.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp -o seqdbcol.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp -o seqdbgimask.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/inclIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/bioseqgaps_ci.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ -security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/split/id_range.cpp -o id_range.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/split/object_splitinfo.cpp -o object_splitinfo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/split/asn_sizer.cpp -o asn_sizer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/split/annot_piece.cpp -o annot_piece.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/split/chunk_info.cpp -o chunk_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/split/size.cpp -o size.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/split/split_exceptions.cpp -o split_exceptions.o /bin/rm -f libid2_split.so .libid2_split.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libid2_split.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blob_splitter.o blob_splitter_params.o split_blob.o blob_splitter_impl.o blob_splitter_parser.o blob_splitter_maker.o id_range.o object_splitinfo.o asn_sizer.o annot_piece.o chunk_info.o size.o split_exceptions.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjmgr -lseqsplit -lseqset -lseq -lgeneral -lxser -lxcompress -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2_split.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libid2_split.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libid2_split.so /bin/ln -f .id2_split.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.id2_split.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split' In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/obj_sniff.cpp -o obj_sniff.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_loc_util.cpp -o seq_loc_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_align_util.cpp -o seq_align_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/seq_trimmer.cpp -o seq_trimmer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/bioseqgaps_ci.cpp -o bioseqgaps_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp -o objutil.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/feature_edit.cpp -o feature_edit.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-comp/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp: In instantiation of ‘bool ncbi::objects::{anonymous}::s_IsTagStart(const _T&, const _T&) [with _T = const char*]’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp:1805:81: required from here /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/objutil.cpp:1733:57: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] for (int possible_str_idx = 0; possible_str_idx < num_possible_tag_starts; ++possible_str_idx) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ blast+-2.7.1/c++/src/objtools/data_loaders/genbank/info_cache.cpp -o info_cache.o /bin/rm -f libncbi_xreader.a .libncbi_xreader.a.stamp /bin/rm -f libncbi_xreader.so .libncbi_xreader.so.stamp ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o /usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libncbi_xreader.a /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader.a /bin/ln -f .ncbi_xreader-static.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader-static.dep /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libncbi_xreader.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader.so /bin/ln -f .ncbi_xreader.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_cache UNIX_PROJ="" sources= configurables=configurables.null cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id1 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j4 --jobserver-auth=7,8 all /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. ude /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp -o seqdbobj.o /bin/rm -f libseqdb.so .libseqdb.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libseqdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblastdb -lxobjmgr -lseq -lgeneral -lxser -lsequtil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libseqdb.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqdb.so /bin/ln -f .seqdb.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.seqdb.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader' cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause_base.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef_source_desc.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_desc.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_available_modifier.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ ile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef.cpp -o autodef.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause_base.cpp -o autodef_feature_clause_base.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_desc.cpp -o autodef_source_desc.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_available_modifier.cpp -o autodef_available_modifier.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_mod_combo.cpp -o autodef_mod_combo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_group.cpp -o autodef_source_group.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/incIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_mod_combo.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o /bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp /bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp ar cr libncbi_xreader_id2.a reader_id2.o /usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC reader_id2.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libncbi_xreader_id2.a /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_id2.a /bin/ln -f .ncbi_xreader_id2-static.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_id2-static.dep /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libncbi_xreader_id2.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_id2.so /bin/ln -f .ncbi_xreader_id2.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_id2.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2' cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/autodef_options.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_options.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seq/Seq_descr.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/seq_descr_ci.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/seqdesc_ci.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_source_group.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o /bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp /bin/rm -f libncbi_xreader_id1.so .libncbi_xreader_id1.so.stamp ar cr libncbi_xreader_id1.a reader_id1.o /usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC reader_id1.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libncbi_xreader_id1.a /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_id1.a /bin/ln -f .ncbi_xreader_id1-static.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_id1-static.dep /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libncbi_xreader_id1.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_id1.so /bin/ln -f .ncbi_xreader_id1.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_id1.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1' cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=writedb UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp: In member function ‘bool ncbi::objects::CAutoDefFeatureClause::x_GetExonDescription(std::__cxx11::string&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp:725:28: warning: unused variable ‘subtype’ [-Wunused-variable] CSeqFeatData::ESubtype subtype = m_MainFeat.GetData().GetSubtype(); ^~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp -o reader_cache.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o /bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp /bin/rm -f libncbi_xreader_cache.so .libncbi_xreader_cache.so.stamp ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o /usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libncbi_xreader_cache.a /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_cache.a /bin/ln -f .ncbi_xreader_cache-static.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_cache-static.dep /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libncbi_xreader_cache.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xreader_cache.so /bin/ln -f .ncbi_xreader_cache.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xreader_cache.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache' cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blast_services_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_writer/writedb_error.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp: In constructor ‘ncbi::CWriteDB_File::CWriteDB_File(const string&, const string&, int, Uint8, bool)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:113:22: warning: unused variable ‘MAX_OFFSET_BITS’ [-Wunused-variable] static const int MAX_OFFSET_BITS = (sizeof m_Offset * 8) - 1; ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp: In member function ‘int ncbi::CWriteDB_File::Write(const ncbi::CTempString&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp:149:22: warning: unused variable ‘MAX_OFFSET_BITS’ [-Wunused-variable] static const int MAX_OFFSET_BITS = (sizeof m_Offset * 8) - 1; ^~~~~~~~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb.cpp -o writedb.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp -o writedb_impl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp -o writedb_volume.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp -o writedb_files.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp -o writedb_isam.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp -o writedb_gimask.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -lude /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_feature_clause.cpp -o autodef_feature_clause.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objmgr/util/autodef_options.cpp -o autodef_options.o /bin/rm -f libxobjutil.so .libxobjutil.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxobjutil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC weight.o sequence.o feature.o indexer.o seqtitle.o create_defline.o obj_sniff.o seq_loc_util.o seq_align_util.o seq_trimmer.o bioseqgaps_ci.o objutil.o feature_edit.o autodef.o autodef_feature_clause_base.o autodef_source_desc.o autodef_available_modifier.o autodef_mod_combo.o autodef_source_group.o autodef_feature_clause.o autodef_options.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjmgr -lseqset -lseq -lpub -lbiblio -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjutil.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxobjutil.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxobjutil.so /bin/ln -f .xobjutil.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xobjutil.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util' cd objtools/seqmasks_io/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=seqmasks_io UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp -o bdbloader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp -o cached_sequence.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp -o local_blastdb_adapter.o /bin/rm -f libncbi_xloader_blastdb.so .libncbi_xloader_blastdb.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_blastdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC bdbloader.o cached_sequence.o local_blastdb_adapter.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjmgr -lseqset -lseq -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libncbi_xloader_blastdb.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xloader_blastdb.so /bin/ln -f .ncbi_xloader_blastdb.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xloader_blastdb.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' cd algo/blast/dbindex/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgoblastdbindex UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seq/Seqdesc.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp:39: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp -o mask_cmdline_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp -o mask_bdb_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp -o mask_fasta_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer.cpp -o mask_writer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp -o mask_writer_fasta.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_int.cpp -o mask_writer_int.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp: In function ‘const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp:306:19: warning: variable ‘tmp’ set but not used [-Wunused-but-set-variable] unsigned long tmp; ^~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:40: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp: In member function ‘std::__cxx11::string ncbi::blastdbindex::CSubjectMap_Factory_Base::extractSeqVector(ncbi::blastdbindex::CSubjectMap_Factory_Base::TSeqData&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:53: warning: ‘std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)’ is deprecated [-Wdeprecated-declarations] string idstr = objects::sequence::GetTitle( bsh ); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:42: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:53: warning: ‘std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)’ is deprecated [-Wdeprecated-declarations] string idstr = objects::sequence::GetTitle( bsh ); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp:42: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); ^~~~~~~~ g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp -o writedb_convert.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp -o writedb_general.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp -o writedb_column.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp -o mask_info_registry.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp -o taxid_set.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/build_db.cpp -o build_db.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPmake[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blast_services_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blast_services_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_services_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blast_services_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blast_services_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test' cd objtools/alnmgr/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=alnmgr UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr TMPL=alnmgr -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbienv.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/build_db.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_generators.cpp: In function ‘void ncbi::InitSplicedsegFromPairwiseAln(ncbi::objects::CSpliced_seg&, const ncbi::CPairwiseAln&, ncbi::objects::CScope*)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_generators.cpp:538:44: warning: typedef ‘TAlnRngColl’ locally defined but not used [-Wunused-local-typedefs] typedef CAlignRangeCollection TAlnRngColl; ^~~~~~~~~~~ Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp -o mask_writer_tab.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp -o mask_writer_seqloc.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o /bin/rm -f libseqmasks_io.so .libseqmasks_io.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libseqmasks_io.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjread -lxobjutil -lxobjmgr -lblastdb -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libseqmasks_io.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libseqmasks_io.so /bin/ln -f .seqmasks_io.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.seqmasks_io.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io' cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex' /usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp -o sequence_istream_fasta.o /usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp -o sequence_istream_bdb.o /usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex.cpp -o dbindex.o /usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_factory.cpp -o dbindex_factory.o /usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/dbindex_search.cpp -o dbindex_search.o /bin/rm -f libxalgoblastdbindex.so .libxalgoblastdbindex.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxalgoblastdbindex.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast -lseqdb -lxobjread -lxobjutil -lxobjmgr -lseqset -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxalgoblastdbindex.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalgoblastdbindex.so /bin/ln -f .xalgoblastdbindex.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xalgoblastdbindex.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex' cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_builders.cpp -o aln_builders.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_converters.cpp -o aln_converters.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_generators.cpp -o aln_generators.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_seqid.cpp -o aln_seqid.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/aln_serial.cpp -o aln_serial.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alndiag.cpp -o alndiag.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/invalid_data_exception.hpp:31, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: ‘CSeqFormatterConfig’ is deprecated [-Wdeprecated-declarations] CSeqFormatterConfig config = CSeqFormatterConfig()); ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here struct NCBI_DEPRECATED CSeqFormatterConfig { ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: ‘CSeqFormatterConfig’ is deprecated [-Wdeprecated-declarations] void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here struct NCBI_DEPRECATED CSeqFormatterConfig { ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: ‘CSeqFormatterConfig’ is deprecated [-Wdeprecated-declarations] CSeqFormatterConfig config = CSeqFormatterConfig()); ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here struct NCBI_DEPRECATED CSeqFormatterConfig { ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: ‘CSeqFormatterConfig’ is deprecated [-Wdeprecated-declarations] void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here struct NCBI_DEPRECATED CSeqFormatterConfig { ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:49:74: warning: ‘CSeqFormatterConfig’ is deprecated [-Wdeprecated-declarations] CSeqFormatterConfig config /* = CSeqFormatterConfig() */) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here struct NCBI_DEPRECATED CSeqFormatterConfig { ^~~~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/invalid_data_exception.hpp:31, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:270:72: warning: ‘CSeqFormatterConfig’ is deprecated [-Wdeprecated-declarations] void CSeqFormatter::DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config) ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here struct NCBI_DEPRECATED CSeqFormatterConfig { ^~~~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ IC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp -o multisource_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/criteria.cpp -o criteria.o /bin/rm -f libwritedb.so .libwritedb.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libwritedb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC writedb.o writedb_impl.o writedb_volume.o writedb_files.o writedb_isam.o writedb_gimask.o writedb_convert.o writedb_general.o writedb_column.o mask_info_registry.o taxid_set.o build_db.o multisource_util.o criteria.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjread -lxobjmgr -lblastdb -lseqset -lseq -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libwritedb.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libwritedb.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libwritedb.so /bin/ln -f .writedb.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.writedb.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer' cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb_rmt UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp: In member function ‘std::__cxx11::string ncbi::CBlastDBExtractor::ExtractLeafTaxIds()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp:396:24: warning: variable ‘taxids_iter’ set but not used [-Wunused-but-set-variable] set::iterator taxids_iter = taxids.begin(); ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmap.cpp: In member function ‘ncbi::CRef ncbi::objects::CAlnMap::CreateAlignFromRange(const std::vector&, ncbi::TSignedSeqPos, ncbi::TSignedSeqPos, ncbi::objects::CAlnMap::ESegmentTrimFlag)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmap.cpp:1467:35: warning: comparison of integer expressions of different signedness: ‘ncbi::objects::CAlnMap::TNumrow’ {aka ‘int’} and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] for (TNumrow row = 0; row < selected_rows.size(); row++) { ~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp: In static member function ‘static bool ncbi::objects::CAlnMixMatches::x_CompareChainScores(const ncbi::CRef&, const ncbi::CRef&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:76:55: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] match1->m_ChainScore == match2->m_ChainScore && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ match1->m_Score > match2->m_Score || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp: In member function ‘void ncbi::objects::CAlnMixMatches::Add(const ncbi::objects::CDense_seg&, ncbi::objects::CAlnMixMatches::TAddFlags)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:192:59: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] (aln_seq1->m_StrandScore > 0 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ strand1 == eNa_strand_minus || ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:196:59: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] aln_seq2->m_StrandScore > 0 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ strand2 == eNa_strand_minus || ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp:198:59: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] aln_seq2->m_StrandScore < 0 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ strand2 != eNa_strand_minus)) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmerger.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp: In member function ‘bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] seq1->m_SeqIdx == seq2->m_SeqIdx && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ seq1->m_ChildIdx < seq2->m_ChildIdx; ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp: In member function ‘void ncbi::objects::CAlnMixMerger::x_Merge()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:140:40: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] if (m_AlnMixMatches->m_ContainsNA && m_AlnMixMatches->m_ContainsAA || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp: In member function ‘void ncbi::objects::CAlnMixMerger::x_CreateDenseg()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:1210:44: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘int’ [-Wsign-compare] if (start_its_i->second->first != -1) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:1232:40: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] if (m_AlnMixMatches->m_ContainsNA && m_AlnMixMatches->m_ContainsAA || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmerger.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmix.cpp:38: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp: In member function ‘bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] seq1->m_SeqIdx == seq2->m_SeqIdx && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ seq1->m_ChildIdx < seq2->m_ChildIdx; ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_writer.cpp -o seq_writer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp -o blastdb_dataextract.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp -o blastdb_formatter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp -o seq_formatter.o /bin/rm -f libblastdb_format.so .libblastdb_format.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libblastdb_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq_writer.o blastdb_dataextract.o blastdb_formatter.o seq_formatter.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjutil -lxobjmgr -lseq -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libblastdb_format.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastdb_format.so /bin/ln -f .blastdb_format.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.blastdb_format.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format' cd objtools/cleanup/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=cleanup UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup TMPL=cleanup -w -j4 --jobserver-auth=7,8 all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/gbloader.cpp -o gbloader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/gbload_util.cpp -o gbload_util.o /bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp /bin/rm -f libncbi_xloader_genbank.so .libncbi_xloader_genbank.so.stamp ar cr libncbi_xloader_genbank.a gbloader.o gbload_util.o /usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC gbloader.o gbload_util.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnect -lxcompress -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libncbi_xloader_genbank.a /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xloader_genbank.a /bin/ln -f .ncbi_xloader_genbank-static.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xloader_genbank-static.dep /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libncbi_xloader_genbank.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xloader_genbank.so /bin/ln -f .ncbi_xloader_genbank.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xloader_genbank.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=makeindex LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp: In member function ‘bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] seq1->m_SeqIdx == seq2->m_SeqIdx && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ seq1->m_ChildIdx < seq2->m_ChildIdx; ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp: In member function ‘void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp:311:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] if (plus && prev_start_plus_len < start || ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp: In member function ‘void ncbi::objects::CAlnMixMerger::x_Merge()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp:752:44: warning: ‘width2’ may be used uninitialized in this function [-Wmaybe-uninitialized] while(start < start2 + len * width2) { ~~~~^~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp -o bdbloader_rmt.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o /bin/rm -f libncbi_xloader_blastdb_rmt.so .libncbi_xloader_blastdb_rmt.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_blastdb_rmt.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC bdbloader_rmt.o remote_blastdb_adapter.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xloader_blastdb -lblast_services -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libncbi_xloader_blastdb_rmt.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so /bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.ncbi_xloader_blastdb_rmt.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' cd objtools/simple/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple' S=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmap.cpp -o alnmap.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmapprint.cpp -o alnmapprint.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmatch.cpp -o alnmatch.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmerger.cpp -o alnmerger.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnmix.cpp -o alnmix.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnpos_ci.cpp -o alnpos_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnsegments.cpp -o alnsegments.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncmake[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/simple TMPL=xobjsimple -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup_utils.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/dbindex/sequence_istream_fasta.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/main.cpp:42: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqset/Seq_entry.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp: In member function ‘bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] seq1->m_SeqIdx == seq2->m_SeqIdx && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ seq1->m_ChildIdx < seq2->m_ChildIdx; ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp: In static member function ‘static bool ncbi::objects::CAlnMixSequences::x_CompareChainScores(const ncbi::CRef&, const ncbi::CRef&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp:84:51: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] seq1->m_ChainScore == seq2->m_ChainScore && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ seq1->m_Score > seq2->m_Score || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp: In static member function ‘static bool ncbi::objects::CCleanup::x_HasShortIntron(const ncbi::objects::CSeq_loc&, size_t)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp:2623:68: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] if (abs((long int)this_start - (long int)prev_end) < min_len) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/simple/simple_om.cpp -o simple_om.o /bin/rm -f libxobjsimple.so .libxobjsimple.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxobjsimple.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC simple_om.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lncbi_xloader_genbank -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjsimple.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxobjsimple.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxobjsimple.so /bin/ln -f .xobjsimple.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xobjsimple.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple' cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function ‘void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp:136:64: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] if (left_seg < 0 || seg > right_seg && right_seg > 0) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function ‘void ncbi::objects::CAlnVecPrinter::ClustalStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp:300:64: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] if (left_seg < 0 || seg > right_seg && right_seg > 0) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/main.cpp -o main.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp -o mkindex_app.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie main.o mkindex_app.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalgoblastdbindex -lblast -lcomposition_adjustment -lseqdb -lblastdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o makembindex /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f makembindex /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f makembindex /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/makembindex make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex' cd app/dustmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/dustmasker TMPL=dustmasker -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. bi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp -o sparse_aln.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbiIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_autoinit.hpp:46, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:39: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/sparse_aln.hpp:34, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp: In member function ‘std::__cxx11::string& ncbi::CSparseAln::GetAlnSeqString(ncbi::IAlnExplorer::TNumrow, std::__cxx11::string&, const TSignedRange&, bool) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/sparse_aln.cpp:702:46: warning: comparison of integer expressions of different signedness: ‘ncbi::COpenRange::position_type’ {aka ‘int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] if (translate && aln_range.GetLength() >= trim_from + trim_to) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alntext.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp: In member function ‘void ncbi::objects::CNewCleanup_imp::x_RemoveFlankingQuotes(std::__cxx11::string&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:7071:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] for( ; first_pos <= last_pos ; ++first_pos, --last_pos ) { ~~~~~~~~~~^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:7085:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] if( first_pos > last_pos ) { ~~~~~~~~~~^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp: In member function ‘void ncbi::objects::CNewCleanup_imp::RnarefGenBC(ncbi::objects::CRNA_ref&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:8276:10: warning: unused variable ‘changed’ [-Wunused-variable] bool changed = false; ^~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp: In member function ‘void ncbi::objects::CNewCleanup_imp::RnaFeatBC(ncbi::objects::CRNA_ref&, ncbi::objects::CSeq_feat&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:9168:102: warning: enum constant in boolean context [-Wint-in-bool-context] (rna.GetType() == CRNA_ref::eType_mRNA || rna.GetType() == CRNA_ref::eType_rRNA || CRNA_ref::eType_tRNA) && ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp: In member function ‘void ncbi::objects::CNewCleanup_imp::x_FixStructuredCommentKeywords(ncbi::objects::CBioseq&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:10153:22: warning: catching polymorphic type ‘class ncbi::CException’ by value [-Wcatch-value=] } catch (CException) { ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp:10155:18: warning: catching polymorphic type ‘class ncbi::CException’ by value [-Wcatch-value=] } catch (CException) { ^~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/score_builder_base.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/score_builder_base.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/dustmasker/main.cpp -o main.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/dustmasker/dust_mask_app.cpp -o dust_mask_app.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie main.o dust_mask_app.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalgodustmask -lseqmasks_io -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lseqdb -lblastdb -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o dustmasker /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f dustmasker /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f dustmasker /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/dustmasker make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker' cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdb_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. -blast+-2.7.1/c++/src/objtools/alnmgr/sparse_ci.cpp -o sparse_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/alntext.cpp -o alntext.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/alnmgr/score_builder_base.cpp -o score_builder_base.o /bin/rm -f libxalnmgr.so .libxalnmgr.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxalnmgr.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC aln_builders.o aln_converters.o aln_generators.o aln_seqid.o aln_serial.o alndiag.o alnmap.o alnmapprint.o alnmatch.o alnmerger.o alnmix.o alnpos_ci.o alnsegments.o alnseq.o alnvec.o alnvec_iterator.o alnvecprint.o pairwise_aln.o sparse_aln.o sparse_ci.o alntext.o score_builder_base.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjutil -lxobjmgr -lseqset -lseq -lxser -ltables -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxalnmgr.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalnmgr.so /bin/ln -f .xalnmgr.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xalnmgr.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr' cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_formatter.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/blastdb_seqid.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: ‘CSeqFormatterConfig’ is deprecated [-Wdeprecated-declarations] CSeqFormatterConfig config = CSeqFormatterConfig()); ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here struct NCBI_DEPRECATED CSeqFormatterConfig { ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:85: warning: ‘CSeqFormatterConfig’ is deprecated [-Wdeprecated-declarations] void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here struct NCBI_DEPRECATED CSeqFormatterConfig { ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:68: warning: ‘CSeqFormatterConfig’ is deprecated [-Wdeprecated-declarations] CSeqFormatterConfig config = CSeqFormatterConfig()); ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here struct NCBI_DEPRECATED CSeqFormatterConfig { ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:96:84: warning: ‘CSeqFormatterConfig’ is deprecated [-Wdeprecated-declarations] void DumpAll(CSeqDB& blastdb, CSeqFormatterConfig config = CSeqFormatterConfig()); ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here struct NCBI_DEPRECATED CSeqFormatterConfig { ^~~~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function ‘void seq_writer::TestNoFormatSpecifier::test_method()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:55:41: warning: ‘CSeqFormatter’ is deprecated [-Wdeprecated-declarations] BOOST_REQUIRE_THROW(CSeqFormatter f(format_spec, db, std::cout), ^~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:102:9: note: in definition of macro ‘BOOST_CHECK_THROW_IMPL’ S; \ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter ^~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function ‘void seq_writer::TestInvalidFormatSpecifiers_Empty::test_method()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:119:57: warning: ‘CSeqFormatter’ is deprecated [-Wdeprecated-declarations] #define NcbiEmptyString NCBI_NS_NCBI::CNcbiEmptyString::Get() ^~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:102:9: note: in definition of macro ‘BOOST_CHECK_THROW_IMPL’ S; \ ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:120:19: note: in expansion of macro ‘NcbiEmptyString’ #define kEmptyStr NcbiEmptyString ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:62:41: note: in expansion of macro ‘kEmptyStr’ BOOST_REQUIRE_THROW(CSeqFormatter f(kEmptyStr, db, std::cout), ^~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function ‘void seq_writer::TestInvalidFormatSpecifiers_InvalidAlgoId::test_method()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:69:25: warning: ‘CSeqFormatterConfig’ is deprecated [-Wdeprecated-declarations] CSeqFormatterConfig config; ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here struct NCBI_DEPRECATED CSeqFormatterConfig { ^~~~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:39: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:71:40: warning: ‘CSeqFormatter’ is deprecated [-Wdeprecated-declarations] BOOST_REQUIRE_THROW(CSeqFormatter f("%m", db, std::cout, config), ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:102:9: note: in definition of macro ‘BOOST_CHECK_THROW_IMPL’ S; \ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function ‘void seq_writer::TestValidFormatSpecifiers::test_method()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:78:25: warning: ‘CSeqFormatterConfig’ is deprecated [-Wdeprecated-declarations] CSeqFormatterConfig config; ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here struct NCBI_DEPRECATED CSeqFormatterConfig { ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:94:24: warning: ‘CSeqFormatter’ is deprecated [-Wdeprecated-declarations] CSeqFormatter f(*itr, db, std::cout, config); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:98:20: warning: ‘CSeqFormatter’ is deprecated [-Wdeprecated-declarations] CSeqFormatter f("%m", db, std::cout, config); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function ‘void seq_writer::TestRequestGiOidLength::test_method()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:109:21: warning: ‘CSeqFormatter’ is deprecated [-Wdeprecated-declarations] CSeqFormatter f(format_spec, db, out); ^~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function ‘void seq_writer::TestRequestSeqId::test_method()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:151:21: warning: ‘CSeqFormatter’ is deprecated [-Wdeprecated-declarations] CSeqFormatter f(format_spec, db, out); ^~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function ‘void seq_writer::TestRequestSeqIdLong::test_method()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:195:21: warning: ‘CSeqFormatter’ is deprecated [-Wdeprecated-declarations] CSeqFormatter f(format_spec, db, out); ^~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function ‘void seq_writer::TestRequestAccessionPIGTaxidTitle::test_method()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:228:21: warning: ‘CSeqFormatter’ is deprecated [-Wdeprecated-declarations] CSeqFormatter f(format_spec, db, out); ^~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function ‘void seq_writer::TestRequestGiGivenPIG::test_method()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:259:21: warning: ‘CSeqFormatter’ is deprecated [-Wdeprecated-declarations] CSeqFormatter f(format_spec, db, out); ^~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function ‘void seq_writer::TestRequestSequenceDataLength::test_method()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:284:21: warning: ‘CSeqFormatter’ is deprecated [-Wdeprecated-declarations] CSeqFormatter f(format_spec, db, out); ^~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function ‘void seq_writer::TestMaskedFasta::test_method()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:314:25: warning: ‘CSeqFormatterConfig’ is deprecated [-Wdeprecated-declarations] CSeqFormatterConfig config; ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here struct NCBI_DEPRECATED CSeqFormatterConfig { ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:319:21: warning: ‘CSeqFormatter’ is deprecated [-Wdeprecated-declarations] CSeqFormatter f(format_spec, db, out, config); ^~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter ^~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp: In member function ‘void seq_writer::TestMaskedSequenceData::test_method()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:358:25: warning: ‘CSeqFormatterConfig’ is deprecated [-Wdeprecated-declarations] CSeqFormatterConfig config; ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here struct NCBI_DEPRECATED CSeqFormatterConfig { ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:361:21: warning: ‘CSeqFormatter’ is deprecated [-Wdeprecated-declarations] CSeqFormatter f(format_spec, db, out, config); ^~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:77:50: note: declared here class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter ^~~~~~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gene_info_reader_app.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o gene_info_reader /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_reader /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f gene_info_reader /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/gene_info_reader make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo' cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqdb_demo LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp -o seq_writer_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp -o seq_formatter_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seq_writer_unit_test.o seq_formatter_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblastdb_format -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -ldl -lm -lpthread -o blastdb_format_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_format_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blastdb_format_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdb_format_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqdb_demo.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o seqdb_demo /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_demo /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f seqdb_demo /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/seqdb_demo make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo' cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdb.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/blast/seqdb_reader/seqdbexpert.hpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp -o seqdb_perf.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqdb_perf.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o seqdb_perf /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_perf /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f seqdb_perf /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/seqdb_perf make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test' cd algo/winmask/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xalgowinmask UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask TMPL=xalgowinmask -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker.cpp -o seq_masker.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_mean.cpp -o seq_masker_score_mean.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp -o seq_masker_score_mean_glob.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_score_min.cpp -o seq_masker_score_min.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_util.cpp -o seq_masker_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window.cpp -o seq_masker_window.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_ambig.cpp -o seq_masker_window_ambig.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_pattern.cpp -o seq_masker_window_pattern.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp -o seq_masker_window_pattern_ambig.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_factory.cpp -o seq_masker_ostat_factory.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat.cpp -o seq_masker_ostat.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp -o seq_masker_ostat_ascii.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_ascii.cpp -o seq_masker_istat_ascii.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_simple.cpp -o seq_masker_uset_simple.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_factory.cpp -o seq_masker_istat_factory.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_bin.cpp -o seq_masker_ostat_bin.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_array.cpp -o seq_masker_uset_array.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_bin.cpp -o seq_masker_istat_bin.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt.cpp -o seq_masker_ostat_opt.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compmake[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp -o seqdb_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqdb_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -ldl -lm -lpthread -o seqdb_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f seqdb_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/seqdb_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' cd objtools/align_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=align_format UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format TMPL=align_format -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_cleanup.cpp -o autogenerated_cleanup.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp -o autogenerated_extended_cleanup.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup.cpp -o cleanup.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/cleanup_utils.cpp -o cleanup_utils.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/cleanup/newcleanupp.cpp -o newcleanupp.o /bin/rm -f libxcleanup.so .libxcleanup.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxcleanup.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o newcleanupp.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjutil -lvalid -lsubmit -ltaxon3 -lxregexp -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lpcre /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp -o seq_masker_ostat_opt_ascii.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_uset_hash.cpp -o seq_masker_uset_hash.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_oascii.cpp -o seq_masker_istat_oascii.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp -o seq_masker_ostat_opt_bin.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_obinary.cpp -o seq_masker_istat_obinary.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_cache_boost.cpp -o seq_masker_cache_boost.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -h /bin/ln -f libxcleanup.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxcleanup.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxcleanup.so /bin/ln -f .xcleanup.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xcleanup.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup' cd objtools/format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xformat UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format TMPL=xformat -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_oascii.cpp: In constructor ‘ncbi::CSeqMaskerIstatOAscii::CSeqMaskerIstatOAscii(const string&, Uint4, Uint4, Uint4, Uint4, Uint4, Uint4, Uint4)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat_oascii.cpp:113:49: warning: ‘unit_size’ may be used uninitialized in this function [-Wmaybe-uninitialized] if( k == 0U || k > (Uint4)(2*unit_size - 1) ) ~^~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showdefline.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbithr_conf.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbimtx.hpp:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbireg.hpp:50, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/align_format/align_format_util.hpp:32, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/accession_item.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp: In function ‘void ncbi::objects::s_GetAssemblyInfo(const ncbi::objects::CBioseqContext&, std::__cxx11::string&, const ncbi::objects::CUser_object&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp:367:16: warning: unused variable ‘is_html’ [-Wunused-variable] const bool is_html = ctx.Config().DoHTML(); ^~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp: In member function ‘void ncbi::align_format::CDisplaySeqalign::DisplaySeqalign(ncbi::CNcbiOstream&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:2044:33: warning: catching polymorphic type ‘class ncbi::CException’ by value [-Wcatch-value=] } catch (CException e){ ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp: In function ‘void ncbi::align_format::s_MakeDomainString(int, int, const string&, std::__cxx11::string&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:4355:49: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] for (int i = actual_first_pos, j = 0; i < domain_string.size() - 1 && j < domain_name.size(); i ++, j ++){ ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp:4355:81: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] for (int i = actual_first_pos, j = 0; i < domain_string.size() - 1 && j < domain_name.size(); i ++, j ++){ ~~^~~~~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/tabular.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_dup_table.cpp:40: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/accession_item.cpp -o accession_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/basecount_item.cpp -o basecount_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/comment_item.cpp -o comment_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/contig_item.cpp -o contig_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/date_item.cpp -o date_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/dbsource_item.cpp -o dbsource_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seq/Bioseq.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_gen_counts.cpp:39: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp: In member function ‘virtual bool ncbi::CWinMaskUtil::CIdSet_TextMatch::find(const ncbi::objects::CBioseq_Handle&) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:130:45: warning: ‘std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)’ is deprecated [-Wdeprecated-declarations] string id_str = sequence::GetTitle( bsh ); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); ^~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:130:45: warning: ‘std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)’ is deprecated [-Wdeprecated-declarations] string id_str = sequence::GetTitle( bsh ); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:289:8: note: declared here string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); ^~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/winmask/win_mask_config.hpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/dbsource_item.cpp:32: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp: In static member function ‘static void ncbi::CWinMaskConfig::AddWinMaskArgs(ncbi::CArgDescriptions&, ncbi::CWinMaskConfig::EAppType, bool)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp:181:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] if(type == eAny || type >= eGenerateMasksWithDuster) ^~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp:185:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ arg_desc.AddDefaultKey( "dust_level", "dust_level", ^~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/defline_item.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp -o writedb_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp -o criteria_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie writedb_unit_test.o criteria_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o writedb_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f writedb_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/writedb_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:44: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/ctrl_items.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_counts_converter.cpp -o win_mask_counts_converter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_dup_table.cpp -o win_mask_dup_table.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_gen_counts.cpp -o win_mask_gen_counts.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_util.cpp -o win_mask_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/win_mask_config.cpp -o win_mask_config.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/winmask/seq_masker_istat.cpp -o seq_masker_istat.o /bin/rm -f libxalgowinmask.so .libxalgowinmask.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxalgowinmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC seq_masker.o seq_masker_score_mean.o seq_masker_score_mean_glob.o seq_masker_score_min.o seq_masker_util.o seq_masker_window.o seq_masker_window_ambig.o seq_masker_window_pattern.o seq_masker_window_pattern_ambig.o seq_masker_ostat_factory.o seq_masker_ostat.o seq_masker_ostat_ascii.o seq_masker_istat_ascii.o seq_masker_uset_simple.o seq_masker_istat_factory.o seq_masker_ostat_bin.o seq_masker_uset_array.o seq_masker_istat_bin.o seq_masker_ostat_opt.o se/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp: In function ‘const string& ncbi::objects::s_AaName(int)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:1815:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] if ( idx > 0 && idx < ArraySize(s_TrnaList) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~ q_masker_ostat_opt_ascii.o seq_masker_uset_hash.o seq_masker_istat_oascii.o seq_masker_ostat_opt_bin.o seq_masker_istat_obinary.o seq_masker_cache_boost.o win_mask_counts_converter.o win_mask_dup_table.o win_mask_gen_counts.o win_mask_util.o win_mask_config.o seq_masker_istat.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqmasks_io -lxobjread -lxobjutil -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxalgowinmask.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxalgowinmask.so /bin/ln -f .xalgowinmask.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xalgowinmask.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask' cd algo/blast/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xblast UNIX_PROJ="" sources= configurables=configurables.null cd app/winmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api TMPL=xblast -w -j4 --jobserver-auth=7,8 all /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/winmasker TMPL=winmasker -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp: In static member function ‘static std::__cxx11::string ncbi::objects::CFeatureItem::x_SeqIdWriteForTable(const ncbi::objects::CBioseq&, bool, bool)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:5031:20: warning: variable ‘patent’ set but not used [-Wunused-but-set-variable] const CSeq_id* patent = NULL; ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp:5032:20: warning: variable ‘pdb’ set but not used [-Wunused-but-set-variable] const CSeq_id* pdb = NULL; ^~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/format_flags.cpp -o format_flags.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/align_format_util.cpp -o align_format_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showdefline.cpp -o showdefline.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/showalign.cpp -o showalign.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/tabular.cpp -o tabular.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/vectorscreen.cpp -o vectorscreen.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=//build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp: In member function ‘virtual void ncbi::objects::CKeywordsItem::x_GatherInfo(ncbi::objects::CBioseqContext&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp:286:18: warning: catching polymorphic type ‘class ncbi::CException’ by value [-Wcatch-value=] } catch (CException) { ^~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_param.hpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/readers/fasta.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_app.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/locus_item.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_cxx.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp: In member function ‘bool ncbi::blast::CBlastOptionsLocal::Validate() const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp:387:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] else ^~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp:396:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ return true; ^~~~~~ ILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/defline_item.cpp -o defline_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/feature_item.cpp -o feature_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/genome_item.cpp -o genome_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/ctrl_items.cpp -o ctrl_items.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/keywords_item.cpp -o keywords_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/locus_item.cpp -o locus_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp -o primary_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/winmasker/main.cpp -o main.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_app.cpp -o win_mask_app.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/winmasker/win_mask_sdust_masker.cpp -o win_mask_sdust_masker.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie main.o win_mask_app.o win_mask_sdust_masker.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalgowinmask -lxalgodustmask -lblast -lcomposition_adjustment -lseqmasks_io -lseqdb -lblastdb -ltables -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o windowmasker /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f windowmasker /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f windowmasker /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/windowmasker make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/taxon1/Taxon1_data.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1__.hpp:1, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/taxon1/taxon1.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/taxFormat.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp: In member function ‘void ncbi::objects::CPrimaryItem::x_GetStrForPrimary(ncbi::objects::CBioseqContext&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp:213:63: warning: comparison of integer expressions of different signedness: ‘ncbi::TSeqPos’ {aka ‘unsigned int’} and ‘ncbi::TSignedSeqPos’ {aka ‘int’} [-Wsign-compare] if ( ctx.IsRefSeq() && last_stop > -1 && (this_start > (last_stop + 1)) ) { ~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/primary_item.cpp:214:28: warning: comparison of integer expressions of different signedness: ‘ncbi::TSeqPos’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] if (this_start < (15 + last_stop) ) { ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/reference_item.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux.cpp -o blast_aux.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_cxx.cpp -o blast_options_cxx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_local_priv.cpp -o blast_options_local_priv.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_builder.cpp -o blast_options_builder.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp -o blast_setup_cxx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqalign.cpp -o blast_seqalign.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blasIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp:1193:34: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)) ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup_cxx.cpp:1241:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)) ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/aln_printer.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp: In member function ‘char* ncbi::blast::CBlastOptionsHandle::GetFilterString() const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:100:36: warning: ‘char* ncbi::blast::CBlastOptions::GetFilterString() const’ is deprecated [-Wdeprecated-declarations] return m_Opts->GetFilterString(); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here NCBI_DEPRECATED char* GetFilterString() const; ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp: In member function ‘void ncbi::blast::CBlastOptionsHandle::SetFilterString(const char*, bool)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:106:37: warning: ‘void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)’ is deprecated [-Wdeprecated-declarations] m_Opts->SetFilterString(f, clear); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_nucl_options.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/sequence_item.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp: In member function ‘void ncbi::objects::CSourceItem::x_SetSource(const ncbi::objects::CBioSource&, const ncbi::CSerialObject&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp:325:21: warning: comparison of integer expressions of different signedness: ‘ncbi::objects::CBioSource_Base::TGenome’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare] if ( genome >= s_organelle_prefix_size ) { ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/disc_nucl_options.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/disc_nucl_options.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/reference_item.cpp -o reference_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/segment_item.cpp -o segment_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/sequence_item.cpp -o sequence_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/source_item.cpp -o source_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/version_item.cpp -o version_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/wgs_item.cpp -o wgs_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-bIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_prot_options.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ t+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_options_handle.cpp -o blast_options_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_nucl_options.cpp -o blast_nucl_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/disc_nucl_options.cpp -o disc_nucl_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_prot_options.cpp -o blast_prot_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_options.cpp -o psiblast_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_rps_options.cpp -o blast_rps_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_options.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_rps_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_rps_options.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/seqalignfilter.cpp -o seqalignfilter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/taxFormat.cpp -o taxFormat.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o /bin/rm -f libalign_format.so .libalign_format.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libalign_format.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o taxFormat.o aln_printer.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalnmgr -lncbi_xloader_genbank -lseqdb -lblast_services -lxobjread -lxobjutil -lxobjmgr -lxnetblast -lblastdb -lgene_info -ltaxon1 -lseqset -lseq -lgeneral -lxser -lxcgi -lxhtml -ltables -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libalign_format.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libalign_format.so /bin/ln -f .align_format.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.align_format.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format' cd objtools/align_format/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=align_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/tblastx_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastx_options.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/general/Int_fuzz_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/general/Int_fuzz.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_seqloc.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/tblastn_options.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastn_options.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/context.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp: In member function ‘virtual void ncbi::objects::CFlatSeqIdQVal::Format(ncbi::objects::TFlatQuals&, const ncbi::CTempString&, ncbi::objects::CBioseqContext&, ncbi::objects::IFlatQVal::TFlags) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp:1050:10: warning: unused variable ‘bHtml’ [-Wunused-variable] bool bHtml = ctx.Config().DoHTML(); ^~~~~ ITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastx_options.cpp -o blastx_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastx_options.cpp -o tblastx_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/tblastn_options.cpp -o tblastn_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpstblastn_options.cpp -o rpstblastn_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_nucl_options.cpp -o phiblast_nucl_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_prot_options.cpp -o phiblast_prot_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/inclIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_rps_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/rpstblastn_options.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpstblastn_options.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/phiblast_nucl_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_nucl_options.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/phiblast_prot_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/phiblast_prot_options.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/pssm_engine.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp: In member function ‘void ncbi::objects::CFlatGatherer::x_IdComments(ncbi::objects::CBioseqContext&, ncbi::objects::CFlatGatherer::EGenomeAnnotComment) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:1029:34: warning: unused variable ‘format’ [-Wunused-variable] CCommentItem::ECommentFormat format = ctx.Config().DoHTML() ? ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp: In member function ‘void ncbi::objects::CFlatGatherer::x_CollectBioSources(ncbi::objects::CFlatGatherer::TSourceFeatSet&) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:1798:13: warning: unused variable ‘scope’ [-Wunused-variable] CScope* scope = &ctx.GetScope(); ^~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_gather.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp: At global scope: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp:759:13: warning: ‘bool ncbi::objects::s_NsAreGaps(const ncbi::objects::CBioseq_Handle&, ncbi::objects::CBioseqContext&)’ defined but not used [-Wunused-function] static bool s_NsAreGaps(const CBioseq_Handle& seq, CBioseqContext& ctx) ^~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ last+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/tsa_item.cpp -o tsa_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_seqloc.cpp -o flat_seqloc.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/qualifiers.cpp -o qualifiers.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/context.cpp -o context.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_items.cpp -o gather_items.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_gather.cpp -o embl_gather.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_gather.cpp -o genbank_gather.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_gather.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ ude /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/pssm_engine.cpp -o pssm_engine.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_blast.cpp -o local_blast.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/remote_blast.cpp -o remote_blast.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp -o seqinfosrc_seqvec.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp -o seqinfosrc_seqdb.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp -o seqinfosrc_bioseq.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_multiseq.cpp -o seqsrc_multiseq.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/item_formatter.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_seqinfosrc.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_multiseq.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp: In member function ‘void ncbi::objects::CFlatFileGenerator::Generate(const ncbi::objects::CSeq_entry_Handle&, ncbi::objects::CFlatItemOStream&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:258:10: warning: unused variable ‘nearFeatsSuppress’ [-Wunused-variable] bool nearFeatsSuppress = false; ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:261:10: warning: variable ‘isNgNtNwNz’ set but not used [-Wunused-but-set-variable] bool isNgNtNwNz = false; ^~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:262:10: warning: variable ‘isGED’ set but not used [-Wunused-but-set-variable] bool isGED = false; ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp:263:10: warning: variable ‘isTPA’ set but not used [-Wunused-but-set-variable] bool isTPA = false; ^~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_id.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_seqdb.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp -o showdefline_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp -o showalign_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/blast_test_util.cpp -o blast_test_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp -o vectorscreen_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp -o tabularinof_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp -o aln_printer_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bl2seq.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ GEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_generator.cpp -o flat_file_generator.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/item_formatter.cpp -o item_formatter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/embl_formatter.cpp -o embl_formatter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp -o genbank_formatter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/format_item_ostream.cpp -o format_item_ostream.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/item_ostream.cpp -o item_ostream.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/ostream_text_ostream.cpp -o ostreamWl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie showdefline_unit_test.o showalign_unit_test.o blast_test_util.o vectorscreen_unit_test.o tabularinof_unit_test.o aln_printer_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lxcgi -lxhtml -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o align_format_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f align_format_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f align_format_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/align_format_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test' In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/bioseq_handle.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_objmgr_tools.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp: In member function ‘virtual void ncbi::objects::CGenbankFormatter::FormatSequence(const ncbi::objects::CSequenceItem&, ncbi::objects::IFlatTextOStream&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp:1963:18: warning: catching polymorphic type ‘class ncbi::objects::CSeqVectorException’ by value [-Wcatch-value=] } catch (CSeqVectorException) { ^~~~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/genbank_formatter.cpp:2011:26: warning: catching polymorphic type ‘class ncbi::objects::CSeqVectorException’ by value [-Wcatch-value=] } catch (CSeqVectorException) { ^~~~~~~~~~~~~~~~~~~ .7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_seqdb.cpp -o seqsrc_seqdb.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seqsrc_query_factory.cpp -o seqsrc_query_factory.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bl2seq.cpp -o bl2seq.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_objmgr_tools.cpp -o blast_objmgr_tools.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/repeats_filter_cxx.cpp -o repeats_filter_cxx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_mtlock.cpp -o blast_mtlock.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_gather.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/repeats_filter_cxx.cpp:39: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_formatter.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_types.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/local_db_adapter.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_db_adapter.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/format/flat_file_config.hpp:34, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_config.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/gbseq_formatter.cpp:33: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ _text_ostream.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/origin_item.cpp -o origin_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_gather.cpp -o ftable_gather.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/ftable_formatter.cpp -o ftable_formatter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/gbseq_formatter.cpp -o gbseq_formatter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_file_config.cpp -o flat_file_config.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/alignment_item.cpp -o alignment_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psibl2seq.cpp -o psibl2seq.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_db_adapter.cpp -o local_db_adapter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast.cpp -o psiblast.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_impl.cpp -o psiblast_impl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_iteration.cpp -o psiblast_iteration.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psi_pssm_input.cpp -o psi_pssm_input.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/msa_pssm_input.cpp -o msa_pssm_input.o /us/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/msa_pssm_input.cpp: In member function ‘void ncbi::blast::CPsiBlastInputClustalW::x_ExtractAlignmentData()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/msa_pssm_input.cpp:376:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘Uint4’ {aka ‘unsigned int’} [-Wsign-compare] while (k < m_Msa->dimensions->query_length && ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/alnmgr/alnmap.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/format/cigar_formatter.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/sam_formatter.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqalign/Dense_seg.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/cigar_formatter.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/format/gather_iter.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_iter.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blastp_kmer_options.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastp_kmer_options.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ r/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/psiblast_aux_priv.cpp -o psiblast_aux_priv.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_aux_priv.cpp -o blast_aux_priv.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_advprot_options.cpp -o blast_advprot_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blastp_kmer_options.cpp -o blastp_kmer_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/version.cpp -o version.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.cpp -o dust_filter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-securitSOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/gap_item.cpp -o gap_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/genome_project_item.cpp -o genome_project_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/sam_formatter.cpp -o sam_formatter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/cigar_formatter.cpp -o cigar_formatter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/gather_iter.cpp -o gather_iter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/html_anchor_item.cpp -o html_anchor_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/inst_info_map.cpp -o inst_info_map.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/dust_filter.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/format/items/flat_qual_slots.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_qual_slots.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/setup_factory.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/setup_factory.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/scope.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/format/items/gene_finder.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/gene_finder.cpp:38: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ y -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rps_aux.cpp -o rps_aux.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/search_strategy.cpp -o search_strategy.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/setup_factory.cpp -o setup_factory.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/prelim_stage.cpp -o prelim_stage.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/traceback_stage.cpp -o traceback_stage.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/uniform_search.cpp -o uniform_search.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-bbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/gene_finder.cpp -o gene_finder.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/format/flat_qual_slots.cpp -o flat_qual_slots.o /bin/rm -f libxformat.so .libxformat.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxformat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC accession_item.o basecount_item.o comment_item.o contig_item.o date_item.o dbsource_item.o defline_item.o feature_item.o genome_item.o ctrl_items.o keywords_item.o locus_item.o primary_item.o reference_item.o segment_item.o sequence_item.o source_item.o version_item.o wgs_item.o tsa_item.o flat_seqloc.o qualifiers.o context.o gather_items.o embl_gather.o genbank_gather.o flat_file_generator.o item_formatter.o embl_formatter.o genbank_formatter.o format_item_ostream.o item_ostream.o ostream_text_ostream.o origin_item.o ftable_gather.o ftable_formatter.o gbseq_formatter.o flat_file_config.o alignment_item.o gap_item.o genome_project_item.o sam_formatter.o cigar_formatter.o gather_iter.o html_anchor_item.o inst_info_map.o gene_finder.o flat_qual_slots.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxalnmgr -lxobjutil -ltaxon3 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxformat.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxformat.so /bin/ln -f .xformat.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xformat.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format' In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/objmgr_query_data.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgr_query_data.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ last+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/local_search.cpp -o local_search.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_results.cpp -o blast_results.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/remote_search.cpp -o remote_search.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/query_data.cpp -o query_data.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgr_query_data.cpp -o objmgr_query_data.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgrfree_query_data.cpp -o objmgrfree_query_data.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp -o bioseq_extract_data_priv.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-mIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/objmgrfree_query_data.cpp:38: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp:38: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_aux.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/query_data.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_cxx.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/effsearchspace_calc.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_aux_priv.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ ap=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/effsearchspace_calc.cpp -o effsearchspace_calc.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp -o blast_seqinfosrc_aux.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_dbindex.cpp -o blast_dbindex.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_cxx.cpp -o split_query_cxx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_aux_priv.cpp -o split_query_aux_priv.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/split_query_blk.cpp -o split_query_blk.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FIIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.hpp:41, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.cpp:38: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/seedtop.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seedtop.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ LE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/winmask_filter.cpp -o winmask_filter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/subj_ranges_set.cpp -o subj_ranges_set.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/rpsblast_local.cpp -o rpsblast_local.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/seedtop.cpp -o seedtop.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/cdd_pssm_input.cpp -o cdd_pssm_input.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/deltablast_options.cpp -o deltablast_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/scoremat/PssmWithParameters.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_prot_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_advprot_options.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/psiblast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/deltablast_options.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/deltablast_options.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ bi-blast+-2.7.1/c++/src/algo/blast/api/deltablast.cpp -o deltablast.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/magicblast_options.cpp -o magicblast_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/api/magicblast.cpp -o magicblast.o /bin/rm -f libxblast.so .libxblast.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o blastp_kmer_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o magicblast_options.o magicblast.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lblast -lseqdb -lseqset -lseq -lgeneral -lxser -lxconnect -lsequtil -ltables -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxblast.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxblast.so /bin/ln -f .xblast.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xblast.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api' cd algo/blast/blastinput/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=blastinput UNIX_PROJ="" sources= configurables=configurables.null cd algo/blast/proteinkmer/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=proteinkmer UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -w -j4 --jobserver-auth=7,8 all /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput TMPL=blastinput -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:431: warning: ignoring #pragma ivdep [-Wunknown-pragmas] #pragma ivdep In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/serialbase.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc_.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqloc/Seq_loc.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/iterator.hpp:35, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_fasta_input.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp: In function ‘void ncbi::neighbor_query(const std::vector >&, const uint64_t*, std::vector >&, ncbi::blast::CMinHashFile&, int, int, double, ncbi::TBlastKmerPrelimScoreVector&, ncbi::BlastKmerStats&, int)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:791:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] if (last_oid == *i) ~~~~~~~~~^~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmer.cpp -o blastkmer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerindex.cpp -o blastkmerindex.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmeroptions.cpp -o blastkmeroptions.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerresults.cpp -o blastkmerresults.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp -o blastkmerutils.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp -o mhfile.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werro/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:84: warning: ignoring #pragma ivdep [-Wunknown-pragmas] #pragma ivdep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:91: warning: ignoring #pragma ivdep [-Wunknown-pragmas] #pragma ivdep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:98: warning: ignoring #pragma ivdep [-Wunknown-pragmas] #pragma ivdep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp: In member function ‘void ncbi::blast::CMinHashFile::GetMinHits(int, int&, std::vector&) const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/mhfile.cpp:77:18: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] if (hits.size() < numHashes) ~~~~~~~~~~~~^~~~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input.cpp -o blast_input.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_fasta_input.cpp -o blast_fasta_input.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_scope_src.cpp -o blast_scope_src.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_args.cpp -o blast_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/cmdline_flags.cpp -o cmdline_flags.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input_aux.cpp -o blast_input_aux.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbiIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_input_aux.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_input_aux.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ r=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/pearson.cpp -o pearson.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/kblastapi.cpp -o kblastapi.o /bin/rm -f libproteinkmer.so .libproteinkmer.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libproteinkmer.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastkmer.o blastkmerindex.o blastkmeroptions.o blastkmerresults.o blastkmerutils.o mhfile.o pearson.o kblastapi.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libproteinkmer.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libproteinkmer.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libproteinkmer.so /bin/ln -f .proteinkmer.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.proteinkmer.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer' cd algo/blast/format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=xblastformat UNIX_PROJ="" sources= configurables=configurables.null cd algo/blast/igblast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ="" LIB_PROJ=igblast UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format' make[4]: warning: -j4 forced in submake: resetting jobserver mode. cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=proteinkmer_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/igblast TMPL=igblast -w -j4 --jobserver-auth=7,8 all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format TMPL=xblastformat -w -j4 --jobserver-auth=7,8 all /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. -blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastp_args.cpp -o blastp_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastn_args.cpp -o blastn_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rmblastn_args.cpp -o rmblastn_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blastx_args.cpp -o blastx_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/tblastn_args.cpp -o tblastn_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/tblastx_args.cpp -o tblastx_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -WIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml2_format.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp: In function ‘void ncbi::s_SeqAlignSetToXMLHits(std::__cxx11::list >&, const ncbi::objects::CSeq_align_set&, ncbi::objects::CScope*, const ncbi::CBlastFormattingMatrix*, const ncbi::TMaskedQueryRegions*, bool, int, int, ncbi::CNcbiOstream*)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:501:86: warning: ‘ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)’ is deprecated [-Wdeprecated-declarations] auto_ptr xml_one_hit_os (new CObjectOStreamXml (one_hit_os,false)); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/objostrxml.hpp:66:26: note: declared here NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut)); ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbimisc.hpp:1099:38: note: in definition of macro ‘NCBI_DEPRECATED_CTOR’ # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED ^~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp: In function ‘bool ncbi::s_SerializeAndSplitBy(const ncbi::CSerialObject&, const char*, std::__cxx11::string&, std::__cxx11::string&, bool, bool)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:785:89: warning: ‘ncbi::CObjectOStreamXml::CObjectOStreamXml(ncbi::CNcbiOstream&, bool)’ is deprecated [-Wdeprecated-declarations] auto_ptr xml_one_iter_os(new CObjectOStreamXml (one_iter_ss_os,false)); ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/serial/objostrxml.hpp:66:26: note: declared here NCBI_DEPRECATED_CTOR(CObjectOStreamXml(CNcbiOstream& out, bool deleteOut)); ^~~~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbimisc.hpp:1099:38: note: in definition of macro ‘NCBI_DEPRECATED_CTOR’ # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED ^~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:49: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp: In member function ‘virtual std::__cxx11::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp:155:39: warning: ‘char* ncbi::blast::CBlastOptions::GetFilterString() const’ is deprecated [-Wdeprecated-declarations] m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here NCBI_DEPRECATED char* GetFilterString() const; ^~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:51: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp: In member function ‘virtual std::__cxx11::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp:140:40: warning: ‘char* ncbi::blast::CBlastOptions::GetFilterString() const’ is deprecated [-Wdeprecated-declarations] m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here NCBI_DEPRECATED char* GetFilterString() const; ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp: In member function ‘void ncbi::CBlastFormat::x_SplitSeqAlign(ncbi::CConstRef, ncbi::objects::CSeq_align_set&, ncbi::objects::CSeq_align_set&, ncbi::blast::CPsiBlastIterationState::TSeqIds&)’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp:520:18: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] if(count >= m_NumSummary) ~~~~~~^~~~~~~~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastfmtutil.cpp -o blastfmtutil.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml_format.cpp -o blastxml_format.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blastxml2_format.cpp -o blastxml2_format.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_format.cpp -o blast_format.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xmlformat.cpp -o data4xmlformat.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xml2format.cpp -o data4xml2format.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-mdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/psiblast_args.cpp -o psiblast_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rpsblast_args.cpp -o rpsblast_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/rpstblastn_args.cpp -o rpstblastn_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/igblastn_args.cpp -o igblastn_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/igblastp_args.cpp -o igblastp_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/deltablast_args.cpp -o deltablast_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blasIn file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xmlformat.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp: In member function ‘virtual std::__cxx11::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp:155:39: warning: ‘char* ncbi::blast::CBlastOptions::GetFilterString() const’ is deprecated [-Wdeprecated-declarations] m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xmlformat.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xmlformat.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here NCBI_DEPRECATED char* GetFilterString() const; ^~~~~~~~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o /bin/rm -f libigblast.so .libigblast.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libigblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC igblast.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libigblast.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libigblast.so /bin/ln -f .igblast.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.igblast.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=aalookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xml2format.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp: In member function ‘virtual std::__cxx11::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp:140:40: warning: ‘char* ncbi::blast::CBlastOptions::GetFilterString() const’ is deprecated [-Wdeprecated-declarations] m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/uniform_search.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/format/data4xml2format.hpp:42, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/data4xml2format.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here NCBI_DEPRECATED char* GetFilterString() const; ^~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/blast_args.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/blastinput/magicblast_args.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/magicblast_args.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp -o proteinkmer_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie proteinkmer_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o proteinkmer_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f proteinkmer_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f proteinkmer_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/proteinkmer_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=aascan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/util/sequence.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_asn1_input.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/sseqloc.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_format.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/vecscreen_run.cpp:37: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/format/blast_async_format.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp: In member function ‘virtual void* CBlastAsyncFormatThread::Main()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp:122:28: warning: comparison of integer expressions of different signedness: ‘std::map >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] if (m_ResultsMap.size() != currNum) ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ t+-2.7.1/c++/src/algo/blast/blastinput/magicblast_args.cpp -o magicblast_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/kblastp_args.cpp -o kblastp_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/blast_asn1_input.cpp -o blast_asn1_input.o /bin/rm -f libblastinput.so .libblastinput.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libblastinput.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o magicblast_args.o kblastp_args.o blast_asn1_input.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxblast -lalign_format -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lseqdb -lxobjread -lxobjread -lvariation -lcreaders -lsubmit -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lxutil -lncbi_xloader_genbank -lncbi_xreader_id2 -lncbi_xreader -lscoremat -lseqset -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libblastinput.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libblastinput.so /bin/ln -f .blastinput.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.blastinput.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdiag_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp -o aalookup_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie aalookup_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o aalookup_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f aalookup_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f aalookup_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/aalookup_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j4 --jobserver-auth=7,8 all make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastengine_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ ap=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/build_archive.cpp -o build_archive.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/vecscreen_run.cpp -o vecscreen_run.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/sam.cpp -o sam.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/format/blast_async_format.cpp -o blast_async_format.o /bin/rm -f libxblastformat.so .libxblastformat.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxblastformat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIC blastfmtutil.o blastxml_format.o blastxml2_format.o blast_format.o data4xmlformat.o data4xml2format.o build_archive.o vecscreen_run.o sam.o blast_async_format.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxformat -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lalign_format -lblastxml -lblastxml2 -lxhtml -lxcgi -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblastformat.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib /bin/ln -f libxblastformat.so /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib/libxblastformat.so /bin/ln -f .xblastformat.dep /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/status/.xblastformat.dep make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastextend_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp -o blastdiag_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdiag_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastdiag_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdiag_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blastdiag_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdiag_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastfilter_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp: In member function ‘void blastengine::testBlastpPrelimSearch::test_method()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:452:33: warning: ‘void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)’ is deprecated [-Wdeprecated-declarations] options->SetFilterString("L"); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_nucl_options.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:53: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^~~~~~~~~~~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp -o aascan_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie aascan_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o aascan_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f aascan_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f aascan_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/aascan_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp -o blastengine_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastengine_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastengine_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastengine_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blastengine_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blastengine_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastoptions_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp -o blastextend_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastextend_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastextend_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastextend_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blastextend_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blastextend_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastsetup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function ‘void blastoptions::RemoteOptionsTest::test_method()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:73:60: warning: ‘void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)’ is deprecated [-Wdeprecated-declarations] BOOST_CHECK_NO_THROW(opts.SetFilterString("m L", false)); /* NCBI_FAKE_WARNING */ ^ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:146:9: note: in definition of macro ‘BOOST_CHECK_NO_THROW_IMPL’ S; \ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function ‘void blastoptions::testRemoteFilterString::test_method()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1329:38: warning: ‘void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)’ is deprecated [-Wdeprecated-declarations] opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1333:38: warning: ‘void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)’ is deprecated [-Wdeprecated-declarations] opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1338:38: warning: ‘void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)’ is deprecated [-Wdeprecated-declarations] opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1340:38: warning: ‘void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)’ is deprecated [-Wdeprecated-declarations] opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1344:38: warning: ‘void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)’ is deprecated [-Wdeprecated-declarations] opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1346:38: warning: ‘void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)’ is deprecated [-Wdeprecated-declarations] opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1350:38: warning: ‘void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)’ is deprecated [-Wdeprecated-declarations] opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1352:38: warning: ‘void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)’ is deprecated [-Wdeprecated-declarations] opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1356:38: warning: ‘void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)’ is deprecated [-Wdeprecated-declarations] opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^~~~~~~~~~~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1358:38: warning: ‘void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)’ is deprecated [-Wdeprecated-declarations] opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:173:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^~~~~~~~~~~~~~~ In file included from /usr/include/boost/test/test_tools.hpp:45, from /usr/include/boost/test/unit_test.hpp:18, from /usr/include/boost/test/auto_unit_test.hpp:16, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:67, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function ‘void blastoptions::testOptionsDeepCopy::test_method()’: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1397:57: warning: ‘char* ncbi::blast::CBlastOptions::GetFilterString() const’ is deprecated [-Wdeprecated-declarations] BOOST_CHECK_EQUAL(string(optsClone->GetFilterString()), string("L;m;")); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options_handle.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/blast_options.hpp:171:27: note: declared here NCBI_DEPRECATED char* GetFilterString() const; ^~~~~~~~~~~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbitime.hpp:62, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbi_system.hpp:36, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbifile.hpp:46, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/util/util_misc.hpp:33, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp -o blasthits_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blasthits_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blasthits_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blasthits_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blasthits_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blasthits_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=delta_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp -o blastoptions_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastoptions_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastoptions_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastoptions_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blastoptions_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blastoptions_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=gapinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp -o delta_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie delta_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o delta_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f delta_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f delta_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/delta_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=gencode_singleton_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp -o blastfilter_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastfilter_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastfilter_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastfilter_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blastfilter_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blastfilter_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=hspfilter_besthit_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gapinfo_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxconnect -lxncbi -ldl -lm -lpthread -o gapinfo_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f gapinfo_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f gapinfo_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/gapinfo_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=hspfilter_culling_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp -o blastsetup_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastsetup_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastsetup_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastsetup_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blastsetup_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blastsetup_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=hspstream_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp -o gencode_singleton_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie gencode_singleton_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o gencode_singleton_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f gencode_singleton_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f gencode_singleton_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/gencode_singleton_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=linkhsp_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp -o hspfilter_besthit_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie hspfilter_besthit_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o hspfilter_besthit_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_besthit_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f hspfilter_besthit_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/hspfilter_besthit_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=magicblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp -o hspfilter_culling_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie hspfilter_culling_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o hspfilter_culling_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_culling_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f hspfilter_culling_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/hspfilter_culling_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=msa2pssm_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp -o hspstream_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp -o hspstream_test_util.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie hspstream_unit_test.o hspstream_test_util.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o hspstream_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspstream_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f hspstream_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/hspstream_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=ntlookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp -o msa2pssm_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie msa2pssm_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o msa2pssm_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f msa2pssm_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f msa2pssm_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/msa2pssm_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=ntscan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp -o linkhsp_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie linkhsp_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o linkhsp_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f linkhsp_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f linkhsp_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/linkhsp_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=optionshandle_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp -o magicblast_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie magicblast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -lm -lpthread -o magicblast_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f magicblast_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f magicblast_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/magicblast_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=phiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp -o ntlookup_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie ntlookup_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o ntlookup_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntlookup_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f ntlookup_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/ntlookup_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=prelimsearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie phiblast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o phiblast_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f phiblast_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f phiblast_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/phiblast_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=psibl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp -o ntscan_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie ntscan_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o ntscan_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntscan_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f ntscan_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/ntscan_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=psiblast_iteration_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie prelimsearch_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o prelimsearch_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f prelimsearch_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f prelimsearch_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/prelimsearch_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=psiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp -o optionshandle_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie optionshandle_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o optionshandle_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f optionshandle_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f optionshandle_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/optionshandle_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=pssmcreate_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp -o psiblast_iteration_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psiblast_iteration_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o psiblast_iteration_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_iteration_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f psiblast_iteration_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/psiblast_iteration_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=pssmenginefreqratios_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp -o psibl2seq_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psibl2seq_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o psibl2seq_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f psibl2seq_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f psibl2seq_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/psibl2seq_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=querydata_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -w -j4 --jobserver-auth=7,8 all /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp -o pssmenginefreqratios_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie pssmenginefreqratios_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o pssmenginefreqratios_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmenginefreqratios_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f pssmenginefreqratios_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/pssmenginefreqratios_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=queryinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp -o psiblast_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psiblast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o psiblast_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f psiblast_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/psiblast_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=redoalignment_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp -o pssmcreate_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp -o pssm_test_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp -o pssmcreate_cdd_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie pssmcreate_unit_test.o pssm_test_util.o pssmcreate_cdd_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o pssmcreate_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmcreate_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f pssmcreate_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/pssmcreate_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=remote_blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp -o querydata_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie querydata_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o querydata_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f querydata_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f querydata_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/querydata_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=rps_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp -o queryinfo_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie queryinfo_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o queryinfo_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f queryinfo_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f queryinfo_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/queryinfo_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=scoreblk_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie redoalignment_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o redoalignment_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f redoalignment_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f redoalignment_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/redoalignment_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=search_strategy_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp -o rps_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie rps_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o rps_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f rps_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f rps_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/rps_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqinfosrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie scoreblk_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o scoreblk_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f scoreblk_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f scoreblk_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/scoreblk_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seqsrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp -o remote_blast_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie remote_blast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o remote_blast_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f remote_blast_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f remote_blast_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/remote_blast_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=setupfactory_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp -o seqinfosrc_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqinfosrc_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o seqinfosrc_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqinfosrc_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f seqinfosrc_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/seqinfosrc_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=split_query_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j4 --jobserver-auth=7,8 all make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/util/random_gen.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp -o search_strategy_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie search_strategy_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o search_strategy_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f search_strategy_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f search_strategy_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/search_strategy_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=stat_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/stat_unit_test.cpp -o stat_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie stat_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o stat_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f stat_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f stat_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/stat_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=subj_ranges_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp -o setupfactory_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie setupfactory_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o setupfactory_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f setupfactory_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f setupfactory_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/setupfactory_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp -o seqsrc_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp -o seqsrc_mock.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp -o mockseqsrc1_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp -o mockseqsrc2_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqsrc_unit_test.o seqsrc_mock.o mockseqsrc1_unit_test.o mockseqsrc2_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o seqsrc_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqsrc_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f seqsrc_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/seqsrc_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=tracebacksearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:332:26: note: in expansion of macro ‘THROWS’ THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api/blast_setup.hpp:353:48: note: in expansion of macro ‘THROWS’ Uint1 GetSentinelByte(EBlastEncoding encoding) THROWS((CBlastException)); ^~~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp -o subj_ranges_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie subj_ranges_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o subj_ranges_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f subj_ranges_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f subj_ranges_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/subj_ranges_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=uniform_search_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie split_query_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o split_query_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f split_query_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f split_query_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/split_query_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=version_reference_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp -o tracebacksearch_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie tracebacksearch_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o tracebacksearch_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f tracebacksearch_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f tracebacksearch_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/tracebacksearch_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp -o traceback_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie traceback_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o traceback_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f traceback_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f traceback_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/traceback_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=bdbloader_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_test_util.hpp:103:5: note: in expansion of macro ‘THROWS’ THROWS((ncbi::blast::CBlastException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp -o version_reference_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie version_reference_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o version_reference_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f version_reference_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f version_reference_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/version_reference_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blast_formatter LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blast_formatter -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objtools/data_loaders/blastdb/bdbloader.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/blast_formatter.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp -o uniform_search_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie uniform_search_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o uniform_search_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f uniform_search_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f uniform_search_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/uniform_search_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blastn -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include -I../ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp -o bdbloader_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie bdbloader_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o bdbloader_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f bdbloader_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f bdbloader_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/bdbloader_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb' cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blastp -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/blastn_app.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/blastp_app.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/blast_formatter.cpp -o blast_formatter.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blast_formatter.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blast_formatter /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_formatter /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blast_formatter /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blast_formatter make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=blastx -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/blastn_app.cpp -o blastn_app.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastn_app.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lxformat -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxregexp -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastn /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blastn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blastn make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=deltablast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=deltablast -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/blastx_app.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/blastp_app.cpp -o blastp_app.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastp_app.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastp /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastp /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blastp /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blastp make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=psiblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=psiblast -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp -o seqalignfilter_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp -o blastfmtutil_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp -o build_archive_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp -o vecscreen_run_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/blast_format/blast_format_unit_test.cpp -o blast_format_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seqalignfilter_unit_test.o blastfmtutil_unit_test.o build_archive_unit_test.o vecscreen_run_unit_test.o blast_format_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o blast_format_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_format_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blast_format_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blast_format_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format' cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=rpsblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=rpsblast -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/deltablast_app.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/psiblast_app.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/rpsblast_app.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/blastx_app.cpp -o blastx_app.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastx_app.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastx /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastx /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blastx /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blastx make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=rpstblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=rpstblastn -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/rpstblastn_app.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/deltablast_app.cpp -o deltablast_app.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie deltablast_app.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o deltablast /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f deltablast /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f deltablast /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/deltablast make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=seedtop LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=seedtop -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/rpsblast_app.cpp -o rpsblast_app.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie rpsblast_app.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o rpsblast /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpsblast /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f rpsblast /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/rpsblast make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=tblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=tblastn -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie psiblast_app.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o psiblast /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f psiblast /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/psiblast make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=tblastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast TMPL=tblastx -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/seedtop_app.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/tblastn_app.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/rpstblastn_app.cpp -o rpstblastn_app.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie rpstblastn_app.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o rpstblastn /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpstblastn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f rpstblastn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/rpstblastn make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdb_aliastool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/tblastx_app.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie seedtop_app.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o seedtop /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f seedtop /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f seedtop /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/seedtop make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdbcheck LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=blastdbcheck -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/tblastx_app.cpp -o tblastx_app.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie tblastx_app.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o tblastx /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastx /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f tblastx /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/tblastx make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdbcmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=blastdbcmd -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie tblastn_app.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o tblastn /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f tblastn /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/tblastn make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastdbcp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=blastdbcp -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdb_aliastool.cpp -o blastdb_aliastool.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdb_aliastool.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastdb_aliastool /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_aliastool /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blastdb_aliastool /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdb_aliastool make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=convert2blastmask LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=convert2blastmask -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcmd.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb/convert2blastmask.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcp.cpp -o blastdbcp.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdbcp.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lwritedb -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lxser -lxcgi -lxhtml -lxconnect -lxutil -lxncbi -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastdbcp /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcp /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blastdbcp /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdbcp make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=makeblastdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=makeblastdb -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcheck.cpp -o blastdbcheck.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdbcheck.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastdbcheck /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcheck /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blastdbcheck /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdbcheck make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb/convert2blastmask.cpp -o convert2blastmask.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie convert2blastmask.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o convert2blastmask /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f convert2blastmask /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f convert2blastmask /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/convert2blastmask make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' cd app/blastdb/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=makeprofiledb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' cd app/segmasker/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=segmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb TMPL=makeprofiledb -w -j4 --jobserver-auth=7,8 all make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/segmasker TMPL=segmasker -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/version.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/algo/blast/api/version.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp:36: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiargs.hpp:84, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiapp.hpp:43, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/segmasker/segmasker.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb/blastdbcmd.cpp -o blastdbcmd.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastdbcmd.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o blastdbcmd /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcmd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blastdbcmd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blastdbcmd make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blastinput_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/segmasker/segmasker.cpp -o segmasker.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie segmasker.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lxobjsimple -lxalgosegmask -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -ldl -lm -lpthread -o segmasker /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f segmasker /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f segmasker /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/segmasker make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=bl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objmgr/object_manager.hpp:45, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp:34: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeprofiledb.cpp -o makeprofiledb.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie makeprofiledb.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o makeprofiledb /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeprofiledb /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f makeprofiledb /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/makeprofiledb make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j4 --jobserver-auth=5,6 APP_PROJ=blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb/makeblastdb.cpp -o makeblastdb.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/app/blastdb/masked_range_set.cpp -o masked_range_set.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie makeblastdb.o masked_range_set.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lz -lbz2 -ldl -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -ldl -lm -lpthread -o makeblastdb /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeblastdb /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f makeblastdb /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/makeblastdb make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j4 --jobserver-auth=7,8 all make[5]: warning: -j4 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' In file included from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistr.hpp:39, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/test_boost.hpp:44, from /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp:35: /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/corelib/ncbiexpt.hpp:71:21: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] # define THROWS(x) throw x ^~~~~ /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include/objects/seqfeat/SubSource.hpp:103:67: note: in expansion of macro ‘THROWS’ static CRef DateFromCollectionDate (const string& str) THROWS((CException)); ^~~~~~ make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp -o blast_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blast_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blast_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blast_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blast_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp -o bl2seq_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie bl2seq_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o bl2seq_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f bl2seq_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f bl2seq_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/bl2seq_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp -o blastinput_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -fdebug-prefix-map=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/inc -I/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/include /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp -o blast_scope_src_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -g -O -fPIE -pie blastinput_unit_test.o blast_scope_src_unit_test.o -Wl,-rpath-link,/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -L/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/lib -ltest_boost -lentrez2cli -lentrez2 -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lvalid -ltaxon3 -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lncbi_xreader -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lgnutls -lmbedtls -lmbedx509 -lmbedcrypto -lz -lnsl -lz -lbz2 -ldl -ldl -lm -lpthread -o blastinput_unit_test /bin/bash /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastinput_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin /bin/ln -f blastinput_unit_test /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/bin/blastinput_unit_test make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test' make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test' make[3]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build' make[2]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build' make[1]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' echo "Save time and do nothing for architecture independent builds" Save time and do nothing for architecture independent builds make[1]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' debian/rules override_dh_auto_test make[1]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' dh_auto_test cd c\+\+ && /usr/bin/make V=1 -j1 check VERBOSE=1 make[2]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++' if test -s ""; then \ cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build && /usr/bin/make -w -j1 check_p RUN_CHECK=Y; \ else \ cd /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build && /usr/bin/make -w -j1 check_r RUN_CHECK=Y; \ fi make[3]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build' ====================================================================== make[4]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build' /usr/bin/make -C corelib -w -j1 check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/corelib' /usr/bin/make -C util -w -j1 check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' /usr/bin/make -C regexp -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp' NOTE: Skipping project regexp due to unmet requirements: LocalPCRE make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/regexp TMPL=regexp -w -j1 mark-as-disabled make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp' make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp' make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp' make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/regexp' /usr/bin/make -C xregexp -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/xregexp' /usr/bin/make -C compress -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress' /usr/bin/make -C bzip2 -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2' NOTE: Skipping project bzip2 due to unmet requirements: LocalBZ2 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/bzip2 TMPL=bzip2 -w -j1 mark-as-disabled make[9]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2' make[9]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2' make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2' make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/bzip2' /usr/bin/make -C zlib -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/zlib' NOTE: Skipping project zlib due to unmet requirements: LocalZ make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/zlib' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/util/compress/zlib TMPL=zlib -w -j1 mark-as-disabled make[9]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/zlib' make[9]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/zlib' make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/zlib' make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/zlib' /usr/bin/make -C api -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api' make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress/api' make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/compress' /bin/echo 'Warning: non-existent sub-project "diff"' Warning: non-existent sub-project "diff" /bin/echo 'Warning: non-existent sub-project "image"' Warning: non-existent sub-project "image" /usr/bin/make -C tables -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/tables' /usr/bin/make -C creaders -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/creaders' /usr/bin/make -C sequtil -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/sequtil' /usr/bin/make -C bitset -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/bitset' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util/bitset' /bin/echo 'Warning: non-existent sub-project "qparse"' Warning: non-existent sub-project "qparse" /bin/echo 'Warning: non-existent sub-project "lmdb"' Warning: non-existent sub-project "lmdb" /bin/echo 'Warning: non-existent sub-project "lmdbxx"' Warning: non-existent sub-project "lmdbxx" /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/util' /usr/bin/make -C connect -w -j1 check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' /usr/bin/make -C services -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect/services' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect/services' /bin/echo 'Warning: non-existent sub-project "ext"' Warning: non-existent sub-project "ext" /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "daemons"' Warning: non-existent sub-project "daemons" make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/connect' /usr/bin/make -C cgi -w -j1 check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/cgi' /usr/bin/make -C html -w -j1 check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/html' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/html' /usr/bin/make -C build-system -w -j1 check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system' /usr/bin/make -C helpers -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers' SKIP -- build-system/helpers/run_with_lock make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/helpers' /usr/bin/make -C project_tree_builder -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder' SKIP -- build-system/project_tree_builder/project_tree_builder /usr/bin/make -C msbuild -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild' NOTE: Skipping project msbuild due to unmet requirements: MSWin make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild' /usr/bin/make -f /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -w -j1 mark-as-disabled make[9]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[9]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system/project_tree_builder' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/build-system' /usr/bin/make -C serial -w -j1 check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' /usr/bin/make -C datatool -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool' TEST -- serial/datatool/datatool make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial/datatool' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "soap"' Warning: non-existent sub-project "soap" make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/serial' /usr/bin/make -C db -w -j1 check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/db' /usr/bin/make -C sqlite -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/db/sqlite' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/db/sqlite' /bin/echo 'Warning: non-existent sub-project "bdb"' Warning: non-existent sub-project "bdb" make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/db' /bin/echo 'Warning: non-existent sub-project "dbapi"' Warning: non-existent sub-project "dbapi" /usr/bin/make -C objects -w -j1 check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects' /usr/bin/make -C general -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/general' /usr/bin/make -C biblio -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biblio' /usr/bin/make -C medline -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medline' /usr/bin/make -C pub -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pub' /usr/bin/make -C seqcode -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqcode' /usr/bin/make -C seq -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seq' /usr/bin/make -C seqset -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqset' /usr/bin/make -C submit -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/submit' /usr/bin/make -C seqedit -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqedit' /usr/bin/make -C seqsplit -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqsplit' /usr/bin/make -C id1 -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id1' /usr/bin/make -C id2 -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/id2' /usr/bin/make -C entrez2 -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrez2' /usr/bin/make -C pubmed -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pubmed' /usr/bin/make -C medlars -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/medlars' /usr/bin/make -C mla -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mla' /usr/bin/make -C proj -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/proj' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/proj' /usr/bin/make -C scoremat -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/scoremat' /usr/bin/make -C blast -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blast' /usr/bin/make -C blastdb -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastdb' /usr/bin/make -C blastxml -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml' /usr/bin/make -C blastxml2 -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/blastxml2' /usr/bin/make -C mmdb -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mmdb' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mmdb' /usr/bin/make -C cn3d -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/cn3d' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/cn3d' /usr/bin/make -C cdd -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/cdd' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/cdd' /usr/bin/make -C ncbimime -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/ncbimime' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/ncbimime' /usr/bin/make -C pcsubstance -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcsubstance' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcsubstance' /usr/bin/make -C pcassay -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcassay' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/pcassay' /usr/bin/make -C gbseq -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbseq' /usr/bin/make -C insdseq -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/insdseq' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/insdseq' /usr/bin/make -C tinyseq -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/tinyseq' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/tinyseq' /usr/bin/make -C biotree -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biotree' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/biotree' /usr/bin/make -C entrezgene -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrezgene' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/entrezgene' /usr/bin/make -C omssa -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/omssa' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/omssa' /usr/bin/make -C remap -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/remap' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/remap' /usr/bin/make -C seqtest -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqtest' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/seqtest' /usr/bin/make -C taxon1 -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon1' /usr/bin/make -C taxon3 -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/taxon3' /usr/bin/make -C gbproj -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbproj' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/gbproj' /usr/bin/make -C trackmgr -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/trackmgr' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/trackmgr' /usr/bin/make -C valerr -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valerr' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valerr' /usr/bin/make -C valid -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/valid' /usr/bin/make -C access -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/access' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/access' /usr/bin/make -C docsum -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/docsum' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/docsum' /usr/bin/make -C featdef -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/featdef' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/featdef' /usr/bin/make -C genomecoll -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' /usr/bin/make -C gc_cli -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll/gc_cli' TEST -- objects/genomecoll/gc_cli/gc_cli make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll/gc_cli' make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genomecoll' /usr/bin/make -C homologene -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/homologene' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/homologene' /usr/bin/make -C mim -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mim' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/mim' /usr/bin/make -C objprt -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/objprt' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/objprt' /usr/bin/make -C variation -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/variation' /usr/bin/make -C macro -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/macro' /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/macro' /usr/bin/make -C genesbyloc -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genesbyloc' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/genesbyloc' /usr/bin/make -C coords -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/coords' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/coords' /usr/bin/make -C varrep -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/varrep' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects/varrep' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objects' /usr/bin/make -C objmgr -w -j1 check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /usr/bin/make -C util -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util' /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/util' /usr/bin/make -C split -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr/split' make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objmgr' /usr/bin/make -C objtools -w -j1 check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools' /bin/echo 'Warning: non-existent sub-project "unit_test_util"' Warning: non-existent sub-project "unit_test_util" /usr/bin/make -C readers -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' /bin/echo 'Warning: non-existent sub-project "app"' Warning: non-existent sub-project "app" /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/readers' /usr/bin/make -C blast -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast' /usr/bin/make -C seqdb_reader -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader' /usr/bin/make -C demo -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo' SKIP -- objtools/blast/seqdb_reader/demo/seqdb_demo make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/demo' /usr/bin/make -C test -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test' TEST -- objtools/blast/seqdb_reader/test/seqdb_perf make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_reader' /usr/bin/make -C seqdb_writer -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer' /usr/bin/make -C unit_test -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' TEST -- objtools/blast/seqdb_writer/unit_test/writedb_unit_test make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/seqdb_writer' /usr/bin/make -C gene_info_reader -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader' /usr/bin/make -C demo -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo' SKIP -- objtools/blast/gene_info_reader/demo/gene_info_reader make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/demo' /usr/bin/make -C unit_test -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' TEST -- objtools/blast/gene_info_reader/unit_test/gene_info_unit_test make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/gene_info_reader' /bin/echo 'Warning: non-existent sub-project "gene_info_writer"' Warning: non-existent sub-project "gene_info_writer" /usr/bin/make -C services -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services' /usr/bin/make -C unit_test -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test' SKIP -- objtools/blast/services/unit_test/blast_services_unit_test make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services/unit_test' make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/services' /usr/bin/make -C blastdb_format -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format' /usr/bin/make -C unit_test -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' TEST -- objtools/blast/blastdb_format/unit_test/blastdb_format_unit_test make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast/blastdb_format' make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/blast' /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" /usr/bin/make -C data_loaders -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders' /usr/bin/make -C genbank -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' /usr/bin/make -C cache -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/cache' /bin/echo 'Warning: non-existent sub-project "pubseq"' Warning: non-existent sub-project "pubseq" /usr/bin/make -C id2 -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id2' /usr/bin/make -C id1 -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/id1' /bin/echo 'Warning: non-existent sub-project "pubseq2"' Warning: non-existent sub-project "pubseq2" /usr/bin/make -C gicache -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/gicache' make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank/gicache' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/genbank' /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" /usr/bin/make -C blastdb -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders/blastdb' /bin/echo 'Warning: non-existent sub-project "patcher"' Warning: non-existent sub-project "patcher" /bin/echo 'Warning: non-existent sub-project "asn_cache"' Warning: non-existent sub-project "asn_cache" /bin/echo 'Warning: non-existent sub-project "cdd"' Warning: non-existent sub-project "cdd" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/data_loaders' /usr/bin/make -C simple -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/simple' /usr/bin/make -C alnmgr -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr' /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/alnmgr' /bin/echo 'Warning: non-existent sub-project "cddalignview"' Warning: non-existent sub-project "cddalignview" /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "manip"' Warning: non-existent sub-project "manip" /usr/bin/make -C cleanup -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/cleanup' /usr/bin/make -C format -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/format' /usr/bin/make -C edit -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/edit' /bin/echo 'Warning: non-existent sub-project "protein_match"' Warning: non-existent sub-project "protein_match" /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/edit' /bin/echo 'Warning: non-existent sub-project "validator"' Warning: non-existent sub-project "validator" /bin/echo 'Warning: non-existent sub-project "asniotest"' Warning: non-existent sub-project "asniotest" /bin/echo 'Warning: non-existent sub-project "align"' Warning: non-existent sub-project "align" /usr/bin/make -C seqmasks_io -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io' /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/seqmasks_io' /bin/echo 'Warning: non-existent sub-project "eutils"' Warning: non-existent sub-project "eutils" /usr/bin/make -C align_format -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format' /usr/bin/make -C unit_test -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test' TEST -- objtools/align_format/unit_test/align_format_unit_test make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format/unit_test' make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools/align_format' /bin/echo 'Warning: non-existent sub-project "snputil"' Warning: non-existent sub-project "snputil" /bin/echo 'Warning: non-existent sub-project "uudutil"' Warning: non-existent sub-project "uudutil" /bin/echo 'Warning: non-existent sub-project "variation"' Warning: non-existent sub-project "variation" /bin/echo 'Warning: non-existent sub-project "writers"' Warning: non-existent sub-project "writers" make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/objtools' /bin/echo 'Warning: non-existent sub-project "ctools"' Warning: non-existent sub-project "ctools" /bin/echo 'Warning: non-existent sub-project "sra"' Warning: non-existent sub-project "sra" /usr/bin/make -C algo -w -j1 check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo' /usr/bin/make -C dustmask -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/dustmask' /usr/bin/make -C winmask -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/winmask' /bin/echo 'Warning: non-existent sub-project "sequence"' Warning: non-existent sub-project "sequence" /usr/bin/make -C blast -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast' /usr/bin/make -C composition_adjustment -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment' make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/composition_adjustment' /usr/bin/make -C core -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core' make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/core' /usr/bin/make -C dbindex -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex' /usr/bin/make -C makeindex -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex' SKIP -- algo/blast/dbindex/makeindex/makeindex make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex/makeindex' make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/dbindex' /bin/echo 'Warning: non-existent sub-project "dbindex_search"' Warning: non-existent sub-project "dbindex_search" /usr/bin/make -C api -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api' make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/api' /usr/bin/make -C proteinkmer -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer' /usr/bin/make -C unit_test -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test' TEST -- algo/blast/proteinkmer/unit_test/proteinkmer_unit_test make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer' /usr/bin/make -C format -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format' make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/format' /usr/bin/make -C blastinput -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput' /usr/bin/make -C unit_test -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test' TEST -- algo/blast/blastinput/unit_test/blastinput_unit_test make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput/unit_test' /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/blastinput' /bin/echo 'Warning: non-existent sub-project "blast_sra_input"' Warning: non-existent sub-project "blast_sra_input" /usr/bin/make -C igblast -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast' make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/igblast' /bin/echo 'Warning: non-existent sub-project "gumbel_params"' Warning: non-existent sub-project "gumbel_params" /usr/bin/make -C unit_tests -w -j1 check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests' /usr/bin/make -C blast_format -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format' TEST -- algo/blast/unit_tests/blast_format/blast_format_unit_test make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blast_format' /usr/bin/make -C blastdb -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb' TEST -- algo/blast/unit_tests/blastdb/bdbloader_unit_test make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/blastdb' /usr/bin/make -C seqdb_reader -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' TEST -- algo/blast/unit_tests/seqdb_reader/seqdb_unit_test make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' /usr/bin/make -C api -w -j1 check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blast_unit_test TEST -- algo/blast/unit_tests/api/aalookup_unit_test TEST -- algo/blast/unit_tests/api/seqsrc_unit_test TEST -- algo/blast/unit_tests/api/delta_unit_test TEST -- algo/blast/unit_tests/api/ntlookup_unit_test TEST -- algo/blast/unit_tests/api/seqinfosrc_unit_test TEST -- algo/blast/unit_tests/api/setupfactory_unit_test TEST -- algo/blast/unit_tests/api/search_strategy_unit_test TEST -- algo/blast/unit_tests/api/redoalignment_unit_test TEST -- algo/blast/unit_tests/api/queryinfo_unit_test TEST -- algo/blast/unit_tests/api/querydata_unit_test TEST -- algo/blast/unit_tests/api/pssmenginefreqratios_unit_test TEST -- algo/blast/unit_tests/api/blastsetup_unit_test TEST -- algo/blast/unit_tests/api/blastextend_unit_test TEST -- algo/blast/unit_tests/api/blastdiag_unit_test TEST -- algo/blast/unit_tests/api/pssmcreate_unit_test TEST -- algo/blast/unit_tests/api/psiblast_iteration_unit_test TEST -- algo/blast/unit_tests/api/hspfilter_besthit_unit_test TEST -- algo/blast/unit_tests/api/hspfilter_culling_unit_test TEST -- algo/blast/unit_tests/api/optionshandle_unit_test TEST -- algo/blast/unit_tests/api/msa2pssm_unit_test TEST -- algo/blast/unit_tests/api/tracebacksearch_unit_test TEST -- algo/blast/unit_tests/api/traceback_unit_test TEST -- algo/blast/unit_tests/api/psibl2seq_unit_test TEST -- algo/blast/unit_tests/api/psiblast_unit_test TEST -- algo/blast/unit_tests/api/prelimsearch_unit_test TEST -- algo/blast/unit_tests/api/phiblast_unit_test TEST -- algo/blast/unit_tests/api/split_query_unit_test TEST -- algo/blast/unit_tests/api/scoreblk_unit_test TEST -- algo/blast/unit_tests/api/hspstream_unit_test TEST -- algo/blast/unit_tests/api/rps_unit_test TEST -- algo/blast/unit_tests/api/gapinfo_unit_test TEST -- algo/blast/unit_tests/api/blasthits_unit_test TEST -- algo/blast/unit_tests/api/linkhsp_unit_test TEST -- algo/blast/unit_tests/api/blastengine_unit_test TEST -- algo/blast/unit_tests/api/subj_ranges_unit_test TEST -- algo/blast/unit_tests/api/version_reference_unit_test TEST -- algo/blast/unit_tests/api/ntscan_unit_test TEST -- algo/blast/unit_tests/api/aascan_unit_test TEST -- algo/blast/unit_tests/api/remote_blast_unit_test TEST -- algo/blast/unit_tests/api/uniform_search_unit_test TEST -- algo/blast/unit_tests/api/blastfilter_unit_test TEST -- algo/blast/unit_tests/api/blastoptions_unit_test TEST -- algo/blast/unit_tests/api/gencode_singleton_unit_test TEST -- algo/blast/unit_tests/api/bl2seq_unit_test TEST -- algo/blast/unit_tests/api/stat_unit_test TEST -- algo/blast/unit_tests/api/magicblast_unit_test make[8]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api' make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests' make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast' /usr/bin/make -C segmask -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/segmask' /bin/echo 'Warning: non-existent sub-project "align"' Warning: non-existent sub-project "align" /bin/echo 'Warning: non-existent sub-project "structure"' Warning: non-existent sub-project "structure" /bin/echo 'Warning: non-existent sub-project "ms"' Warning: non-existent sub-project "ms" /bin/echo 'Warning: non-existent sub-project "gnomon"' Warning: non-existent sub-project "gnomon" /bin/echo 'Warning: non-existent sub-project "tree"' Warning: non-existent sub-project "tree" /bin/echo 'Warning: non-existent sub-project "phy_tree"' Warning: non-existent sub-project "phy_tree" /bin/echo 'Warning: non-existent sub-project "seqqa"' Warning: non-existent sub-project "seqqa" /bin/echo 'Warning: non-existent sub-project "cobalt"' Warning: non-existent sub-project "cobalt" /bin/echo 'Warning: non-existent sub-project "text"' Warning: non-existent sub-project "text" /bin/echo 'Warning: non-existent sub-project "volume_merge"' Warning: non-existent sub-project "volume_merge" /bin/echo 'Warning: non-existent sub-project "primer"' Warning: non-existent sub-project "primer" /bin/echo 'Warning: non-existent sub-project "id_mapper"' Warning: non-existent sub-project "id_mapper" make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo' /usr/bin/make -C misc -w -j1 check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/misc' /usr/bin/make -C third_party -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party' /usr/bin/make -C third_party_static -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party_static' NOTE: Skipping project third_party_static due to unmet requirements: -DLL make[7]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party_static' make[7]: Nothing to be done for 'mark-as-disabled_r'. make[7]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party_static' make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/misc/third_party_static' /bin/echo 'Warning: non-existent sub-project "clog"' Warning: non-existent sub-project "clog" /bin/echo 'Warning: non-existent sub-project "grid_cgi"' Warning: non-existent sub-project "grid_cgi" /bin/echo 'Warning: non-existent sub-project "xmlwrapp"' Warning: non-existent sub-project "xmlwrapp" /bin/echo 'Warning: non-existent sub-project "eutils_client"' Warning: non-existent sub-project "eutils_client" /bin/echo 'Warning: non-existent sub-project "hydra_client"' Warning: non-existent sub-project "hydra_client" /bin/echo 'Warning: non-existent sub-project "discrepancy"' Warning: non-existent sub-project "discrepancy" /bin/echo 'Warning: non-existent sub-project "xmlreaders"' Warning: non-existent sub-project "xmlreaders" /bin/echo 'Warning: non-existent sub-project "hgvs"' Warning: non-existent sub-project "hgvs" /bin/echo 'Warning: non-existent sub-project "netstorage"' Warning: non-existent sub-project "netstorage" /bin/echo 'Warning: non-existent sub-project "jsonwrapp"' Warning: non-existent sub-project "jsonwrapp" /bin/echo 'Warning: non-existent sub-project "biosample_util"' Warning: non-existent sub-project "biosample_util" /bin/echo 'Warning: non-existent sub-project "data_loaders_util"' Warning: non-existent sub-project "data_loaders_util" /bin/echo 'Warning: non-existent sub-project "lapackwrapp"' Warning: non-existent sub-project "lapackwrapp" /bin/echo 'Warning: non-existent sub-project "pmcidconv_client"' Warning: non-existent sub-project "pmcidconv_client" /bin/echo 'Warning: non-existent sub-project "grpc_integration"' Warning: non-existent sub-project "grpc_integration" /bin/echo 'Warning: non-existent sub-project "cgi_redirect"' Warning: non-existent sub-project "cgi_redirect" make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/misc' /bin/echo 'Warning: non-existent sub-project "gui"' Warning: non-existent sub-project "gui" /usr/bin/make -C app -w -j1 check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app' /bin/echo 'Warning: non-existent sub-project "asn2asn"' Warning: non-existent sub-project "asn2asn" /bin/echo 'Warning: non-existent sub-project "asn2fasta"' Warning: non-existent sub-project "asn2fasta" /bin/echo 'Warning: non-existent sub-project "asn2flat"' Warning: non-existent sub-project "asn2flat" /bin/echo 'Warning: non-existent sub-project "asnval"' Warning: non-existent sub-project "asnval" /bin/echo 'Warning: non-existent sub-project "asn_cleanup"' Warning: non-existent sub-project "asn_cleanup" /bin/echo 'Warning: non-existent sub-project "id1_fetch"' Warning: non-existent sub-project "id1_fetch" /usr/bin/make -C blast -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' SKIP -- app/blast/blastp SKIP -- app/blast/blastn SKIP -- app/blast/blastx SKIP -- app/blast/tblastn SKIP -- app/blast/tblastx SKIP -- app/blast/psiblast SKIP -- app/blast/rpsblast SKIP -- app/blast/rpstblastn SKIP -- app/blast/blast_formatter SKIP -- app/blast/deltablast SKIP -- app/blast/seedtop make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blast' /bin/echo 'Warning: non-existent sub-project "convert_seq"' Warning: non-existent sub-project "convert_seq" /bin/echo 'Warning: non-existent sub-project "nmer_repeats"' Warning: non-existent sub-project "nmer_repeats" /bin/echo 'Warning: non-existent sub-project "objmgr"' Warning: non-existent sub-project "objmgr" /bin/echo 'Warning: non-existent sub-project "gi2taxid"' Warning: non-existent sub-project "gi2taxid" /bin/echo 'Warning: non-existent sub-project "netschedule"' Warning: non-existent sub-project "netschedule" /bin/echo 'Warning: non-existent sub-project "grid"' Warning: non-existent sub-project "grid" /bin/echo 'Warning: non-existent sub-project "netstorage"' Warning: non-existent sub-project "netstorage" /bin/echo 'Warning: non-existent sub-project "igblast"' Warning: non-existent sub-project "igblast" /usr/bin/make -C winmasker -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' SKIP -- app/winmasker/winmasker make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/winmasker' /usr/bin/make -C dustmasker -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker' SKIP -- app/dustmasker/dustmasker make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/dustmasker' /usr/bin/make -C segmasker -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker' SKIP -- app/segmasker/segmasker make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/segmasker' /usr/bin/make -C blastdb -w -j1 check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/blastdbcmd SKIP -- app/blastdb/makeblastdb SKIP -- app/blastdb/blastdb_aliastool SKIP -- app/blastdb/blastdbcheck SKIP -- app/blastdb/convert2blastmask SKIP -- app/blastdb/blastdbcp SKIP -- app/blastdb/makeprofiledb make[6]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app/blastdb' /bin/echo 'Warning: non-existent sub-project "vecscreen"' Warning: non-existent sub-project "vecscreen" /bin/echo 'Warning: non-existent sub-project "agpconvert"' Warning: non-existent sub-project "agpconvert" /bin/echo 'Warning: non-existent sub-project "id2_fetch"' Warning: non-existent sub-project "id2_fetch" /bin/echo 'Warning: non-existent sub-project "agp_validate"' Warning: non-existent sub-project "agp_validate" /bin/echo 'Warning: non-existent sub-project "objextract"' Warning: non-existent sub-project "objextract" /bin/echo 'Warning: non-existent sub-project "bdb_env_keeper"' Warning: non-existent sub-project "bdb_env_keeper" /bin/echo 'Warning: non-existent sub-project "nw_aligner"' Warning: non-existent sub-project "nw_aligner" /bin/echo 'Warning: non-existent sub-project "speedtest"' Warning: non-existent sub-project "speedtest" /bin/echo 'Warning: non-existent sub-project "idmapper"' Warning: non-existent sub-project "idmapper" /bin/echo 'Warning: non-existent sub-project "formatguess"' Warning: non-existent sub-project "formatguess" /bin/echo 'Warning: non-existent sub-project "multireader"' Warning: non-existent sub-project "multireader" /bin/echo 'Warning: non-existent sub-project "read_blast_result"' Warning: non-existent sub-project "read_blast_result" /bin/echo 'Warning: non-existent sub-project "splign"' Warning: non-existent sub-project "splign" /bin/echo 'Warning: non-existent sub-project "hfilter"' Warning: non-existent sub-project "hfilter" /bin/echo 'Warning: non-existent sub-project "annotwriter"' Warning: non-existent sub-project "annotwriter" /bin/echo 'Warning: non-existent sub-project "compart"' Warning: non-existent sub-project "compart" /bin/echo 'Warning: non-existent sub-project "streamtest"' Warning: non-existent sub-project "streamtest" /bin/echo 'Warning: non-existent sub-project "lds2_indexer"' Warning: non-existent sub-project "lds2_indexer" /bin/echo 'Warning: non-existent sub-project "discrepancy_report"' Warning: non-existent sub-project "discrepancy_report" /bin/echo 'Warning: non-existent sub-project "biosample_chk"' Warning: non-existent sub-project "biosample_chk" /bin/echo 'Warning: non-existent sub-project "gap_stats"' Warning: non-existent sub-project "gap_stats" /bin/echo 'Warning: non-existent sub-project "table2asn"' Warning: non-existent sub-project "table2asn" /bin/echo 'Warning: non-existent sub-project "srcchk"' Warning: non-existent sub-project "srcchk" /bin/echo 'Warning: non-existent sub-project "tableval"' Warning: non-existent sub-project "tableval" /bin/echo 'Warning: non-existent sub-project "ncbi_encrypt"' Warning: non-existent sub-project "ncbi_encrypt" /bin/echo 'Warning: non-existent sub-project "ssub_fork"' Warning: non-existent sub-project "ssub_fork" /bin/echo 'Warning: non-existent sub-project "asn_cache"' Warning: non-existent sub-project "asn_cache" /bin/echo 'Warning: non-existent sub-project "magicblast"' Warning: non-existent sub-project "magicblast" /bin/echo 'Warning: non-existent sub-project "pub_report"' Warning: non-existent sub-project "pub_report" /bin/echo 'Warning: non-existent sub-project "prot_match"' Warning: non-existent sub-project "prot_match" /bin/echo 'Warning: non-existent sub-project "gff_deconcat"' Warning: non-existent sub-project "gff_deconcat" /bin/echo 'Warning: non-existent sub-project "sub_fuse"' Warning: non-existent sub-project "sub_fuse" /bin/echo 'Warning: non-existent sub-project "split_cache"' Warning: non-existent sub-project "split_cache" /bin/echo 'Warning: non-existent sub-project "wig2table"' Warning: non-existent sub-project "wig2table" /bin/echo 'Warning: non-existent sub-project "netcache"' Warning: non-existent sub-project "netcache" /bin/echo 'Warning: non-existent sub-project "rmblastn"' Warning: non-existent sub-project "rmblastn" /bin/echo 'Warning: non-existent sub-project "dblb"' Warning: non-existent sub-project "dblb" /bin/echo 'Warning: non-existent sub-project "tls"' Warning: non-existent sub-project "tls" /bin/echo 'Warning: non-existent sub-project "idfetch"' Warning: non-existent sub-project "idfetch" make[5]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/app' /bin/echo 'Warning: non-existent sub-project "sample"' Warning: non-existent sub-project "sample" /bin/echo 'Warning: non-existent sub-project "internal"' Warning: non-existent sub-project "internal" make[4]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build' ---------------------------------------------------------------------- Building check script... SKIP -- objtools/blast/seqdb_reader/test/seqdb_perf (unmet CHECK_REQUIRES) SKIP -- objtools/blast/seqdb_reader/test/seqdb_perf (unmet CHECK_REQUIRES) SKIP -- objtools/blast/seqdb_reader/test/seqdb_perf (unmet CHECK_REQUIRES) SKIP -- objtools/blast/seqdb_writer/unit_test/writedb_unit_test (unmet CHECK_REQUIRES) SKIP -- objtools/blast/blastdb_format/unit_test/blastdb_format_unit_test (unmet CHECK_REQUIRES) SKIP -- objtools/align_format/unit_test/align_format_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/blastinput/unit_test/blastinput_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/blast_format/blast_format_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/blastdb/bdbloader_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/seqdb_reader/seqdb_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/blast_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/aalookup_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/seqsrc_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/delta_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/ntlookup_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/seqinfosrc_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/setupfactory_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/search_strategy_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/redoalignment_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/queryinfo_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/querydata_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/pssmenginefreqratios_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/blastsetup_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/blastextend_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/pssmcreate_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/psiblast_iteration_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/hspfilter_besthit_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/hspfilter_culling_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/optionshandle_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/msa2pssm_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/tracebacksearch_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/traceback_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/psibl2seq_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/psiblast_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/prelimsearch_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/phiblast_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/split_query_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/scoreblk_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/hspstream_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/rps_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/gapinfo_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/blasthits_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/linkhsp_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/blastengine_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/subj_ranges_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/version_reference_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/ntscan_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/remote_blast_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/uniform_search_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/blastfilter_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/blastoptions_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/gencode_singleton_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/bl2seq_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/stat_unit_test (unmet CHECK_REQUIRES) SKIP -- algo/blast/unit_tests/api/magicblast_unit_test (unmet CHECK_REQUIRES) Done. OK -- [serial/datatool] datatool.sh (real 0.26, user 0.09, sys 0.02) SKP -- [serial/datatool] datatool_xml.sh ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_ASSM ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_ASSM_BY_SEQ ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_TYPELOC OK -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.01, user 0.00, sys 0.00) ERR [201] -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 14.90, user 4.80, sys 1.81) OK -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.01, user 0.00, sys 0.00) ERR [201] -- [algo/blast/unit_tests/api] aascan_unit_test (real 33.05, user 0.03, sys 0.00) Succeeded : 3 Timeout : 0 Failed : 2 Absent : 4 make[3]: *** [/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/build-system/Makefile.meta_r:46: check_r.real] Error 7 make[3]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build' make[2]: *** [Makefile:33: check] Error 2 make[2]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++' dh_auto_test: cd c\+\+ && /usr/bin/make V=1 -j1 check VERBOSE=1 returned exit code 2 make[1]: [debian/rules:64: override_dh_auto_test] Error 2 (ignored) c++/BUILD/build/check.sh concat_err cat c++/BUILD/build/check.sh.out_err ERR [201] -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 14.90, user 4.80, sys 1.81) ERR [201] -- [algo/blast/unit_tests/api] aascan_unit_test (real 33.05, user 0.03, sys 0.00) ====================================================================== proteinkmer_unit_test ====================================================================== 12315/000/0000/PB 0DA5301BC1327021 0001/0001 2018-12-14T03:44:02.277967 lcy01-amd64-002 UNK_CLIENT UNK_SESSION proteinkmer_unit_test start /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test Running 31 test cases... 12315/000/0000/PE 0DA5301BC1327021 0002/0002 2018-12-14T03:44:02.282394 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12315/000/0000/PE 0DA5301BC1327021 0003/0003 2018-12-14T03:44:02.282461 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12315/000/0000/PE 0DA5301BC1327021 0004/0004 2018-12-14T03:44:02.282488 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12315/000/0000/PE 0DA5301BC1327021 0006/0006 2018-12-14T03:44:02.282833 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12315/000/0000/PE 0DA5301BC1327021 0007/0007 2018-12-14T03:44:02.282854 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12315/000/0000/PE 0DA5301BC1327021 0008/0008 2018-12-14T03:44:02.282868 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12315/000/0000/PE 0DA5301BC1327021 0010/0010 2018-12-14T03:44:03.283363 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12315/000/0000/PE 0DA5301BC1327021 0011/0011 2018-12-14T03:44:03.283422 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12315/000/0000/PE 0DA5301BC1327021 0012/0012 2018-12-14T03:44:03.283438 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12315/000/0000/PE 0DA5301BC1327021 0014/0014 2018-12-14T03:44:05.784792 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12315/000/0000/PE 0DA5301BC1327021 0015/0015 2018-12-14T03:44:05.784855 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12315/000/0000/PE 0DA5301BC1327021 0016/0016 2018-12-14T03:44:05.784872 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12315/000/0000/PE 0DA5301BC1327021 0018/0018 2018-12-14T03:44:10.535959 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12315/000/0000/PE 0DA5301BC1327021 0019/0019 2018-12-14T03:44:10.536032 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12315/000/0000/PE 0DA5301BC1327021 0020/0020 2018-12-14T03:44:10.536057 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12315/000/0000/PE 0DA5301BC1327021 0022/0022 2018-12-14T03:44:10.536438 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: ID2(CLoaderException::eConnectionFailed) "reader_id2.cpp", line 257: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2 12315/000/0000/PE 0DA5301BC1327021 0023/0023 2018-12-14T03:44:10.536464 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: GENBANK(CLoaderException::eNoConnection) "reader.cpp", line 187: ncbi::objects::CReader::OpenInitialConnection() --- cannot open initial connection 12315/000/0000/PE 0DA5301BC1327021 0024/0024 2018-12-14T03:44:10.536507 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test Error: UNIT_TEST "proteinkmer_unit_test.cpp", line 83: proteinkmers::KmerResults_invoker() --- Uncaught exception in "KmerResults"(CLoaderException::eNoConnection) cannot open initial connection unknown location(0): fatal error: in "proteinkmers/KmerResults": uncaught exception, system error or abort requested /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp(83): last checkpoint: "KmerResults" entry. lcl|3 Warning: WARNING: No KMERs in query *** 1 failure is detected in the test module "Master Test Suite" Executed 31 test cases. *** 1 failure is detected in the test module "Master Test Suite" 12315/000/0000/PE 0DA5301BC1327021 0025/0025 2018-12-14T03:44:17.136961 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test extra ncbi_phid=0DA5301BC13270210000000000000001 12315/000/0000/PE 0DA5301BC1327021 0026/0026 2018-12-14T03:44:17.137014 lcy01-amd64-002 UNK_CLIENT 0DA5301BC1327021_0000SID proteinkmer_unit_test stop 201 14.864506959 Command exited with non-zero status 201 real 14.90 user 4.80 sys 1.81 Start time : 12/14/2018 03:44:02 Stop time : 12/14/2018 03:44:17 Load averages: 2.69 5.82 5.56 @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ @@@ EXIT CODE: 201 ====================================================================== aascan_unit_test ====================================================================== 12460/000/0000/PB 0DA530ACC1327111 0001/0001 2018-12-14T03:44:17.270945 lcy01-amd64-002 UNK_CLIENT UNK_SESSION aascan_unit_test start /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test Running 4 test cases... 12460/000/0000/PE 0DA530ACC1327111 0002/0002 2018-12-14T03:44:17.273594 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0003/0003 2018-12-14T03:44:17.273629 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0004/0004 2018-12-14T03:44:17.273647 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12460/000/0000/PE 0DA530ACC1327111 0006/0006 2018-12-14T03:44:17.273996 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0007/0007 2018-12-14T03:44:17.274018 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0008/0008 2018-12-14T03:44:17.274032 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12460/000/0000/PE 0DA530ACC1327111 0010/0010 2018-12-14T03:44:18.274885 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0011/0011 2018-12-14T03:44:18.274963 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0012/0012 2018-12-14T03:44:18.274990 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12460/000/0000/PE 0DA530ACC1327111 0014/0014 2018-12-14T03:44:20.775768 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0015/0015 2018-12-14T03:44:20.775832 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0016/0016 2018-12-14T03:44:20.775849 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12460/000/0000/PE 0DA530ACC1327111 0018/0018 2018-12-14T03:44:25.526472 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0019/0019 2018-12-14T03:44:25.526556 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0020/0020 2018-12-14T03:44:25.526573 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown unknown location(0): fatal error: in "aascan/ScanOffsetTest": ncbi::objects::CLoaderException: NCBI C++ Exception: Error: ID2(CLoaderException::eConnectionFailed) "/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp", line 257: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2 Error: GENBANK(CLoaderException::eNoConnection) "/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader.cpp", line 187: ncbi::objects::CReader::OpenInitialConnection() --- cannot open initial connection  /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp(251): last checkpoint: "ScanOffsetTest" fixture entry. 12460/000/0000/PE 0DA530ACC1327111 0024/0024 2018-12-14T03:44:25.527545 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0025/0025 2018-12-14T03:44:25.527568 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0026/0026 2018-12-14T03:44:25.527581 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12460/000/0000/PE 0DA530ACC1327111 0028/0028 2018-12-14T03:44:25.527820 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0029/0029 2018-12-14T03:44:25.527840 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0030/0030 2018-12-14T03:44:25.527853 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12460/000/0000/PE 0DA530ACC1327111 0032/0032 2018-12-14T03:44:26.528267 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0033/0033 2018-12-14T03:44:26.528313 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0034/0034 2018-12-14T03:44:26.528354 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12460/000/0000/PE 0DA530ACC1327111 0036/0036 2018-12-14T03:44:29.029434 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0037/0037 2018-12-14T03:44:29.029508 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0038/0038 2018-12-14T03:44:29.029526 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12460/000/0000/PE 0DA530ACC1327111 0040/0040 2018-12-14T03:44:33.780181 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0041/0041 2018-12-14T03:44:33.780251 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0042/0042 2018-12-14T03:44:33.780268 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown unknown location(0): fatal error: in "aascan/ScanMaxHitsTest": ncbi::objects::CLoaderException: NCBI C++ Exception: Error: ID2(CLoaderException::eConnectionFailed) "/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp", line 257: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2 Error: GENBANK(CLoaderException::eNoConnection) "/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader.cpp", line 187: ncbi::objects::CReader::OpenInitialConnection() --- cannot open initial connection  /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp(331): last checkpoint: "ScanMaxHitsTest" fixture entry. 12460/000/0000/PE 0DA530ACC1327111 0046/0046 2018-12-14T03:44:33.781279 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0047/0047 2018-12-14T03:44:33.781311 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0048/0048 2018-12-14T03:44:33.781333 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12460/000/0000/PE 0DA530ACC1327111 0050/0050 2018-12-14T03:44:33.781614 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0051/0051 2018-12-14T03:44:33.781653 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0052/0052 2018-12-14T03:44:33.781668 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12460/000/0000/PE 0DA530ACC1327111 0054/0054 2018-12-14T03:44:34.782281 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0055/0055 2018-12-14T03:44:34.782359 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0056/0056 2018-12-14T03:44:34.782382 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12460/000/0000/PE 0DA530ACC1327111 0058/0058 2018-12-14T03:44:37.283037 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0059/0059 2018-12-14T03:44:37.283102 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0060/0060 2018-12-14T03:44:37.283124 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12460/000/0000/PE 0DA530ACC1327111 0062/0062 2018-12-14T03:44:42.033810 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0063/0063 2018-12-14T03:44:42.033887 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0064/0064 2018-12-14T03:44:42.033910 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown unknown location(0): fatal error: in "aascan/SkipMaskedRanges": ncbi::objects::CLoaderException: NCBI C++ Exception: Error: ID2(CLoaderException::eConnectionFailed) "/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp", line 257: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2 Error: GENBANK(CLoaderException::eNoConnection) "/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader.cpp", line 187: ncbi::objects::CReader::OpenInitialConnection() --- cannot open initial connection  /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp(384): last checkpoint: "SkipMaskedRanges" fixture entry. 12460/000/0000/PE 0DA530ACC1327111 0068/0068 2018-12-14T03:44:42.035101 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0069/0069 2018-12-14T03:44:42.035132 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0070/0070 2018-12-14T03:44:42.035150 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12460/000/0000/PE 0DA530ACC1327111 0072/0072 2018-12-14T03:44:42.035489 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0073/0073 2018-12-14T03:44:42.035520 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0074/0074 2018-12-14T03:44:42.035541 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12460/000/0000/PE 0DA530ACC1327111 0076/0076 2018-12-14T03:44:43.036185 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0077/0077 2018-12-14T03:44:43.036254 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0078/0078 2018-12-14T03:44:43.036276 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12460/000/0000/PE 0DA530ACC1327111 0080/0080 2018-12-14T03:44:45.536961 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0081/0081 2018-12-14T03:44:45.537031 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0082/0082 2018-12-14T03:44:45.537053 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 12460/000/0000/PE 0DA530ACC1327111 0084/0084 2018-12-14T03:44:50.287647 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1821: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=lcy01-amd64-002.buildd(127.0.1.1)&platform=x86_64-pc-linux-gnu] Failed to connect: Not supported 12460/000/0000/PE 0DA530ACC1327111 0085/0085 2018-12-14T03:44:50.287714 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 106: UNK_FUNC --- [ID2] Service not found 12460/000/0000/PE 0DA530ACC1327111 0086/0086 2018-12-14T03:44:50.287732 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown unknown location(0): fatal error: in "aascan/ScanCheckScores": ncbi::objects::CLoaderException: NCBI C++ Exception: Error: ID2(CLoaderException::eConnectionFailed) "/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp", line 257: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2 Error: GENBANK(CLoaderException::eNoConnection) "/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/objtools/data_loaders/genbank/reader.cpp", line 187: ncbi::objects::CReader::OpenInitialConnection() --- cannot open initial connection  /build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp(434): last checkpoint: "ScanCheckScores" fixture entry. *** 4 failures are detected in the test module "Master Test Suite" Executed 4 test cases. *** 4 failures are detected in the test module "Master Test Suite" 12460/000/0000/PE 0DA530ACC1327111 0090/0090 2018-12-14T03:44:50.289022 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test extra ncbi_phid=0DA530ACC13271110000000000000001 12460/000/0000/PE 0DA530ACC1327111 0091/0091 2018-12-14T03:44:50.289047 lcy01-amd64-002 UNK_CLIENT 0DA530ACC1327111_0000SID aascan_unit_test stop 201 33.020833015 Command exited with non-zero status 201 real 33.05 user 0.03 sys 0.00 Start time : 12/14/2018 03:44:17 Stop time : 12/14/2018 03:44:50 Load averages: 1.50 5.17 5.35 @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ @@@ EXIT CODE: 201 make[1]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' fakeroot debian/rules binary #dh binary -Dc++ --with autotools_dev dh binary -Dc++ dh_testroot -O-Dc\+\+ dh_prep -O-Dc\+\+ dh_installdirs -O-Dc\+\+ debian/rules override_dh_auto_install-arch make[1]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' # cp c++/BUILD/lib/*.so debian/ncbi-blast+/usr/lib/ncbi-blast+/ cp c++/BUILD/bin/* debian/ncbi-blast+/usr/bin/ make[1]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' echo "Nothing to do for architecture independant installs" Nothing to do for architecture independant installs make[1]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' debian/rules override_dh_install-arch make[1]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' # dh_install mv debian/ncbi-blast+/usr/bin/rpsblast debian/ncbi-blast+/usr/bin/rpsblast+ mv debian/ncbi-blast+/usr/bin/seedtop debian/ncbi-blast+/usr/bin/seedtop+ mv debian/ncbi-blast+/usr/bin/legacy_blast.pl debian/ncbi-blast+/usr/bin/legacy_blast mv debian/ncbi-blast+/usr/bin/update_blastdb.pl debian/ncbi-blast+/usr/bin/update_blastdb mv debian/ncbi-blast+/usr/bin/windowmasker_2.2.22_adapter.py \ debian/ncbi-blast+/usr/bin/windowmasker_2.2.22_adapter rm -f debian/ncbi-blast+/usr/bin/*test* debian/ncbi-blast+/usr/bin/seqdb_demo \ debian/ncbi-blast+/usr/bin/datatool debian/ncbi-blast+/usr/bin/run_with_lock \ debian/ncbi-blast+/usr/bin/project_tree_builder for x in debian/ncbi-blast+/usr/bin/*; do \ LD_LIBRARY_PATH=c++/BUILD/lib ldd $x; \ done 2>/dev/null | awk '/BUILD/ { print $3 }' | sort -u | \ xargs cp -v -t debian/ncbi-blast+/usr/lib/ncbi-blast+ 'c++/BUILD/lib/libalign_format.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libalign_format.so' 'c++/BUILD/lib/libbiblio.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libbiblio.so' 'c++/BUILD/lib/libblast.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblast.so' 'c++/BUILD/lib/libblast_services.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblast_services.so' 'c++/BUILD/lib/libblastdb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastdb.so' 'c++/BUILD/lib/libblastdb_format.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastdb_format.so' 'c++/BUILD/lib/libblastinput.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastinput.so' 'c++/BUILD/lib/libblastxml.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastxml.so' 'c++/BUILD/lib/libblastxml2.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libblastxml2.so' 'c++/BUILD/lib/libcomposition_adjustment.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libcomposition_adjustment.so' 'c++/BUILD/lib/libcreaders.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libcreaders.so' 'c++/BUILD/lib/libgbseq.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgbseq.so' 'c++/BUILD/lib/libgene_info.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgene_info.so' 'c++/BUILD/lib/libgeneral.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgeneral.so' 'c++/BUILD/lib/libgenome_collection.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libgenome_collection.so' 'c++/BUILD/lib/libid1.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libid1.so' 'c++/BUILD/lib/libid2.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libid2.so' 'c++/BUILD/lib/libmedlars.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmedlars.so' 'c++/BUILD/lib/libmedline.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmedline.so' 'c++/BUILD/lib/libmla.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmla.so' 'c++/BUILD/lib/libmlacli.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libmlacli.so' 'c++/BUILD/lib/libncbi_xloader_blastdb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xloader_blastdb.so' 'c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xloader_blastdb_rmt.so' 'c++/BUILD/lib/libncbi_xloader_genbank.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xloader_genbank.so' 'c++/BUILD/lib/libncbi_xreader.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader.so' 'c++/BUILD/lib/libncbi_xreader_cache.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader_cache.so' 'c++/BUILD/lib/libncbi_xreader_id1.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader_id1.so' 'c++/BUILD/lib/libncbi_xreader_id2.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libncbi_xreader_id2.so' 'c++/BUILD/lib/libpub.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libpub.so' 'c++/BUILD/lib/libpubmed.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libpubmed.so' 'c++/BUILD/lib/libscoremat.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libscoremat.so' 'c++/BUILD/lib/libseq.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseq.so' 'c++/BUILD/lib/libseqcode.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqcode.so' 'c++/BUILD/lib/libseqdb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqdb.so' 'c++/BUILD/lib/libseqedit.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqedit.so' 'c++/BUILD/lib/libseqmasks_io.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqmasks_io.so' 'c++/BUILD/lib/libseqset.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqset.so' 'c++/BUILD/lib/libseqsplit.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libseqsplit.so' 'c++/BUILD/lib/libsequtil.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libsequtil.so' 'c++/BUILD/lib/libsubmit.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libsubmit.so' 'c++/BUILD/lib/libtables.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libtables.so' 'c++/BUILD/lib/libtaxon1.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libtaxon1.so' 'c++/BUILD/lib/libtaxon3.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libtaxon3.so' 'c++/BUILD/lib/libvalid.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libvalid.so' 'c++/BUILD/lib/libwritedb.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libwritedb.so' 'c++/BUILD/lib/libxalgoblastdbindex.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgoblastdbindex.so' 'c++/BUILD/lib/libxalgodustmask.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgodustmask.so' 'c++/BUILD/lib/libxalgosegmask.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgosegmask.so' 'c++/BUILD/lib/libxalgowinmask.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalgowinmask.so' 'c++/BUILD/lib/libxalnmgr.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxalnmgr.so' 'c++/BUILD/lib/libxblast.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxblast.so' 'c++/BUILD/lib/libxblastformat.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxblastformat.so' 'c++/BUILD/lib/libxcgi.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcgi.so' 'c++/BUILD/lib/libxcleanup.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcleanup.so' 'c++/BUILD/lib/libxcompress.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxcompress.so' 'c++/BUILD/lib/libxconnect.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxconnect.so' 'c++/BUILD/lib/libxformat.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxformat.so' 'c++/BUILD/lib/libxhtml.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxhtml.so' 'c++/BUILD/lib/libxncbi.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxncbi.so' 'c++/BUILD/lib/libxnetblast.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxnetblast.so' 'c++/BUILD/lib/libxnetblastcli.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxnetblastcli.so' 'c++/BUILD/lib/libxobjmgr.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxobjmgr.so' 'c++/BUILD/lib/libxobjread.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxobjread.so' 'c++/BUILD/lib/libxobjutil.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxobjutil.so' 'c++/BUILD/lib/libxregexp.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxregexp.so' 'c++/BUILD/lib/libxser.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxser.so' 'c++/BUILD/lib/libxutil.so' -> 'debian/ncbi-blast+/usr/lib/ncbi-blast+/libxutil.so' make[1]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' debian/rules override_dh_install-indep make[1]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' #if test -d debian/ncbi-blast+-legacy/usr/bin; then cp debian/legacy/legacy.sh debian/ncbi-blast+-legacy/usr/bin/; fi for x in blastall megablast blastpgp bl2seq rpsblast fastacmd formatdb \ seedtop; do \ sed -e "s/.{.*}/$x/" debian/legacy/legacy.sh > debian/ncbi-blast+-legacy/usr/bin/$x; \ chmod +x debian/ncbi-blast+-legacy/usr/bin/$x; \ done make[1]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' dh_installdocs -O-Dc\+\+ dh_installchangelogs -O-Dc\+\+ dh_installexamples -O-Dc\+\+ dh_installman -O-Dc\+\+ dh_installcatalogs -O-Dc\+\+ dh_installcron -O-Dc\+\+ dh_installdebconf -O-Dc\+\+ dh_installemacsen -O-Dc\+\+ dh_installifupdown -O-Dc\+\+ dh_installinfo -O-Dc\+\+ dh_installinit -O-Dc\+\+ dh_installmenu -O-Dc\+\+ dh_installmime -O-Dc\+\+ dh_installmodules -O-Dc\+\+ dh_installlogcheck -O-Dc\+\+ dh_installlogrotate -O-Dc\+\+ dh_installpam -O-Dc\+\+ dh_installppp -O-Dc\+\+ dh_installudev -O-Dc\+\+ dh_installgsettings -O-Dc\+\+ dh_bugfiles -O-Dc\+\+ dh_ucf -O-Dc\+\+ dh_lintian -O-Dc\+\+ dh_gconf -O-Dc\+\+ dh_gconf: Please migrate to dh_installgsettings; gconf + dh_gconf is scheduled for removal. dh_icons -O-Dc\+\+ dh_perl -O-Dc\+\+ dh_usrlocal -O-Dc\+\+ dh_link -O-Dc\+\+ dh_installwm -O-Dc\+\+ dh_installxfonts -O-Dc\+\+ dh_strip_nondeterminism -O-Dc\+\+ dh_compress -O-Dc\+\+ dh_fixperms -O-Dc\+\+ dh_missing -O-Dc\+\+ dh_strip -O-Dc\+\+ dh_makeshlibs -O-Dc\+\+ dh_shlibdeps -O-Dc\+\+ dh_installdeb -O-Dc\+\+ debian/rules override_dh_gencontrol-indep make[1]: Entering directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' dh_gencontrol -pblast2 -- -v1:2.7.1-2 dh_gencontrol -Nblast2 make[1]: Leaving directory '/build/ncbi-blast+-GloMLK/ncbi-blast+-2.7.1' dh_gencontrol -O-Dc\+\+ -Nncbi-blast\+-legacy -Nblast2 dh_md5sums -O-Dc\+\+ dh_builddeb -O-Dc\+\+ INFO: pkgstriptranslations version 143 INFO: pkgstriptranslations version 143 INFO: pkgstriptranslations version 143 pkgstriptranslations: processing ncbi-blast+-legacy (in debian/ncbi-blast+-legacy); do_strip: , oemstrip: pkgstriptranslations: processing ncbi-blast+ (in debian/ncbi-blast+); do_strip: , oemstrip: INFO: pkgstriptranslations version 143 pkgstriptranslations: processing blast2 (in debian/blast2); do_strip: , oemstrip: pkgstriptranslations: processing ncbi-blast+-dbgsym (in debian/.debhelper/ncbi-blast+/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/ncbi-blast+/DEBIAN/control, package ncbi-blast+, directory debian/ncbi-blast+ pkgstripfiles: Truncating usr/share/doc/ncbi-blast+/changelog.Debian.gz to topmost ten records pkgstripfiles: processing control file: debian/blast2/DEBIAN/control, package blast2, directory debian/blast2 INFO: pkgstripfiles: waiting for lock (blast2) ... pkgstripfiles: Running PNG optimization (using 4 cpus) for package ncbi-blast+ ... pkgstripfiles: No PNG files. dpkg-deb: building package 'ncbi-blast+' in '../ncbi-blast+_2.7.1-2_amd64.deb'. pkgstripfiles: processing control file: debian/.debhelper/ncbi-blast+/dbgsym-root/DEBIAN/control, package ncbi-blast+-dbgsym, directory debian/.debhelper/ncbi-blast+/dbgsym-root dpkg-deb: building package 'ncbi-blast+-dbgsym' in 'debian/.debhelper/scratch-space/build-ncbi-blast+/ncbi-blast+-dbgsym_2.7.1-2_amd64.deb'. INFO: pkgstripfiles: waiting for lock (blast2) ... INFO: pkgstripfiles: waiting for lock (blast2) ... INFO: pkgstripfiles: waiting for lock (blast2) ... INFO: pkgstripfiles: waiting for lock (blast2) ... INFO: pkgstripfiles: waiting for lock (blast2) ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/ncbi-blast+-legacy/DEBIAN/control, package ncbi-blast+-legacy, directory debian/ncbi-blast+-legacy Searching for duplicated docs in dependency ncbi-blast+... symlinking changelog.Debian.gz in ncbi-blast+-legacy to file in ncbi-blast+ pkgstripfiles: Running PNG optimization (using 4 cpus) for package ncbi-blast+-legacy ... pkgstripfiles: No PNG files. dpkg-deb: building package 'ncbi-blast+-legacy' in '../ncbi-blast+-legacy_2.7.1-2_all.deb'. Searching for duplicated docs in dependency ncbi-blast+-legacy... symlinking changelog.Debian.gz in blast2 to file in ncbi-blast+ pkgstripfiles: Running PNG optimization (using 4 cpus) for package blast2 ... pkgstripfiles: No PNG files. dpkg-deb: building package 'blast2' in '../blast2_2.7.1-2_all.deb'. Renaming ncbi-blast+-dbgsym_2.7.1-2_amd64.deb to ncbi-blast+-dbgsym_2.7.1-2_amd64.ddeb dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../ncbi-blast+_2.7.1-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20181214-0346 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ ncbi-blast+_2.7.1-2_amd64.changes: ---------------------------------- Format: 1.8 Date: Wed, 12 Dec 2018 22:24:45 -0500 Source: ncbi-blast+ Binary: ncbi-blast+ ncbi-blast+-legacy blast2 Architecture: all amd64 Version: 2.7.1-2 Distribution: disco-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Aaron M. Ucko Description: blast2 - transitional dummy package to ncbi-blast+-legacy ncbi-blast+ - next generation suite of BLAST sequence search tools ncbi-blast+-legacy - NCBI Blast legacy call script Closes: 916000 Changes: ncbi-blast+ (2.7.1-2) unstable; urgency=medium . [ David Miguel Susano Pinto ] * d/control: fix Vcs-* links to point to salsa . [ Aaron M. Ucko ] * d/control: Standards-Version: 4.2.1 (already compliant). * d/patches/support_boost_1_67: New patch to extend Boost support (used for uninstalled tests) through at least version 1.67, per upstream (https://www.ncbi.nlm.nih.gov/viewvc/v1/trunk/c%2B%2B) revisions 79910, 79926, 79928, and 79929. (Closes: #916000.) Checksums-Sha1: f02a01be2d62fbdf5a1944c1b0628aa7d6c97b7a 4576 blast2_2.7.1-2_all.deb 75afcaf725697bb6f29d8723bdbf12ee28b195f3 232699932 ncbi-blast+-dbgsym_2.7.1-2_amd64.ddeb ae9d5d348c9ba3736e02e2d73f8a4d2b8d187f57 5084 ncbi-blast+-legacy_2.7.1-2_all.deb dcb4b840c63ed28f51ed1253a4823812b9ff134d 6459 ncbi-blast+_2.7.1-2_amd64.buildinfo 07715920a1144697369f48fc6e1b8fe679109811 10119100 ncbi-blast+_2.7.1-2_amd64.deb Checksums-Sha256: 1778a8d4f0c415b66c31cb46c8ed7ee86c748bc52eee7976f8266cc4bc83fad0 4576 blast2_2.7.1-2_all.deb 9e43512f1ebdb2f1283ee171112c60b868b51ab3532fcbfc0ebf02787d0052f7 232699932 ncbi-blast+-dbgsym_2.7.1-2_amd64.ddeb d5fe37925b9d48b182bd91dc9b828e58339d66c9031eff28eec42450e59c3586 5084 ncbi-blast+-legacy_2.7.1-2_all.deb 1de461b9b8a7f361bf7218c9a2b5e8b4748e0acfc1de78c918cb834047060d88 6459 ncbi-blast+_2.7.1-2_amd64.buildinfo 148a89302629ce90330bb65500d85bb03e46824e7e13ecee5ccf2033a7538ef4 10119100 ncbi-blast+_2.7.1-2_amd64.deb Files: b9c62dac0375398451eca0e177925aba 4576 oldlibs optional blast2_2.7.1-2_all.deb 6ba29d01990a2914951bbea21f79a123 232699932 debug optional ncbi-blast+-dbgsym_2.7.1-2_amd64.ddeb a0f6c002ee06935462ec3dab833d4f04 5084 science optional ncbi-blast+-legacy_2.7.1-2_all.deb 42d4103074274e9fcba67494fa40a4c1 6459 science optional ncbi-blast+_2.7.1-2_amd64.buildinfo 2ed65255c89b18d78bb0c8665a21fe7e 10119100 science optional ncbi-blast+_2.7.1-2_amd64.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ blast2_2.7.1-2_all.deb ---------------------- new debian package, version 2.0. size 4576 bytes: control archive=628 bytes. 560 bytes, 15 lines control 65 bytes, 1 lines md5sums Package: blast2 Source: ncbi-blast+ (2.7.1-2) Version: 1:2.7.1-2 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 22 Depends: ncbi-blast+-legacy Section: oldlibs Priority: optional Multi-Arch: foreign Homepage: http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/ Description: transitional dummy package to ncbi-blast+-legacy This is a transitional dummy package for ncbi-blast+-legacy. It can safely be removed. drwxr-xr-x root/root 0 2018-12-13 03:24 ./ drwxr-xr-x root/root 0 2018-12-13 03:24 ./usr/ drwxr-xr-x root/root 0 2018-12-13 03:24 ./usr/share/ drwxr-xr-x root/root 0 2018-12-13 03:24 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-12-13 03:24 ./usr/share/doc/blast2/ lrwxrwxrwx root/root 0 2018-12-13 03:24 ./usr/share/doc/blast2/changelog.Debian.gz -> ../ncbi-blast+/changelog.Debian.gz -rw-r--r-- root/root 10274 2018-02-11 16:41 ./usr/share/doc/blast2/copyright ncbi-blast+-legacy_2.7.1-2_all.deb ---------------------------------- new debian package, version 2.0. size 5084 bytes: control archive=932 bytes. 665 bytes, 18 lines control 483 bytes, 9 lines md5sums Package: ncbi-blast+-legacy Source: ncbi-blast+ Version: 2.7.1-2 Architecture: all Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 31 Depends: ncbi-blast+ Breaks: blast2 (<< 1:2.5.0~) Replaces: blast2 (<< 1:2.5.0~) Section: science Priority: optional Multi-Arch: foreign Homepage: http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/ Description: NCBI Blast legacy call script This package adds some fake scripts to call NCBI+ programs with the NCBI blast command line. It makes use of the legacy_blast script in ncbi-blast+ package. drwxr-xr-x root/root 0 2018-12-13 03:24 ./ drwxr-xr-x root/root 0 2018-12-13 03:24 ./usr/ drwxr-xr-x root/root 0 2018-12-13 03:24 ./usr/bin/ -rwxr-xr-x root/root 63 2018-12-13 03:24 ./usr/bin/bl2seq -rwxr-xr-x root/root 65 2018-12-13 03:24 ./usr/bin/blastall -rwxr-xr-x root/root 65 2018-12-13 03:24 ./usr/bin/blastpgp -rwxr-xr-x root/root 65 2018-12-13 03:24 ./usr/bin/fastacmd -rwxr-xr-x root/root 65 2018-12-13 03:24 ./usr/bin/formatdb -rwxr-xr-x root/root 66 2018-12-13 03:24 ./usr/bin/megablast -rwxr-xr-x root/root 65 2018-12-13 03:24 ./usr/bin/rpsblast -rwxr-xr-x root/root 64 2018-12-13 03:24 ./usr/bin/seedtop drwxr-xr-x root/root 0 2018-12-13 03:24 ./usr/share/ drwxr-xr-x root/root 0 2018-12-13 03:24 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-12-13 03:24 ./usr/share/doc/ncbi-blast+-legacy/ lrwxrwxrwx root/root 0 2018-12-13 03:24 ./usr/share/doc/ncbi-blast+-legacy/changelog.Debian.gz -> ../ncbi-blast+/changelog.Debian.gz -rw-r--r-- root/root 10274 2018-02-11 16:41 ./usr/share/doc/ncbi-blast+-legacy/copyright ncbi-blast+_2.7.1-2_amd64.deb ----------------------------- new debian package, version 2.0. size 10119100 bytes: control archive=3608 bytes. 1361 bytes, 25 lines control 6606 bytes, 100 lines md5sums Package: ncbi-blast+ Version: 2.7.1-2 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 42433 Depends: ncbi-data, python, perl:any, libbz2-1.0, libc6 (>= 2.28), libgcc1 (>= 1:3.4), libgnutls30 (>= 3.6.4), libgomp1 (>= 4.9), libmbedcrypto3 (>= 2.13), libmbedtls12 (>= 2.13), libpcre3, libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.11) Enhances: t-coffee Section: science Priority: optional Multi-Arch: foreign Homepage: http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/ Description: next generation suite of BLAST sequence search tools The Basic Local Alignment Search Tool (BLAST) is the most widely used sequence similarity tool. There are versions of BLAST that compare protein queries to protein databases, nucleotide queries to nucleotide databases, as well as versions that translate nucleotide queries or databases in all six frames and compare to protein databases or queries. PSI-BLAST produces a position-specific-scoring-matrix (PSSM) starting with a protein query, and then uses that PSSM to perform further searches. It is also possible to compare a protein or nucleotide query to a database of PSSM’s. 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+------------------------------------------------------------------------------+ Purging /build/ncbi-blast+-GloMLK Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 5379992 Build-Time: 1929 Distribution: disco-proposed Host Architecture: amd64 Install-Time: 11 Job: ncbi-blast+_2.7.1-2.dsc Machine Architecture: amd64 Package: ncbi-blast+ Package-Time: 1943 Source-Version: 2.7.1-2 Space: 5379992 Status: successful Version: 2.7.1-2 -------------------------------------------------------------------------------- Finished at 20181214-0346 Build needed 00:32:23, 5379992k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=disco --arch=amd64 PACKAGEBUILD-15776199 Scanning for processes to kill in build PACKAGEBUILD-15776199