RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux bos01-ppc64el-001 4.2.0-19-generic #23-Ubuntu SMP Wed Nov 11 11:38:17 UTC 2015 ppc64le Buildd toolchain package versions: launchpad-buildd_136 python-lpbuildd_136 sbuild_0.65.2-1ubuntu2 bzr-builder_0.7.3-0ubuntu1 bzr_2.6.0+bzr6602-2ubuntu4 dpkg-dev_1.18.2ubuntu5.1 python-debian_0.1.27ubuntu1. Syncing the system clock with the buildd NTP service... 10 Dec 23:10:31 ntpdate[1591]: adjust time server 10.211.37.1 offset 0.000066 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-8424439', '/home/buildd/filecache-default/64ba6963cee521707036a0c48846d736532c58ef'] Unpacking chroot for build PACKAGEBUILD-8424439 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-8424439'] Mounting chroot for build PACKAGEBUILD-8424439 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-8424439', 'deb http://ftpmaster.internal/ubuntu xenial main universe', 'deb http://ftpmaster.internal/ubuntu xenial-security main universe', 'deb http://ftpmaster.internal/ubuntu xenial-updates main universe', 'deb http://ftpmaster.internal/ubuntu xenial-proposed main universe'] Overriding sources.list in build-PACKAGEBUILD-8424439 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-8424439', 'ppc64el'] Updating debian chroot for build PACKAGEBUILD-8424439 Get:1 http://ftpmaster.internal xenial InRelease [227 kB] Get:2 http://ftpmaster.internal xenial-security InRelease [73.5 kB] Get:3 http://ftpmaster.internal xenial-updates InRelease [73.5 kB] Get:4 http://ftpmaster.internal xenial-proposed InRelease [227 kB] Get:5 http://ftpmaster.internal xenial/main ppc64el Packages [1411 kB] Get:6 http://ftpmaster.internal xenial/universe ppc64el Packages [6851 kB] Get:7 http://ftpmaster.internal xenial/main Translation-en [846 kB] Get:8 http://ftpmaster.internal xenial/universe Translation-en [4747 kB] Get:9 http://ftpmaster.internal xenial-security/main ppc64el Packages [28 B] Get:10 http://ftpmaster.internal xenial-security/universe ppc64el Packages [28 B] Get:11 http://ftpmaster.internal xenial-security/main Translation-en [28 B] Get:12 http://ftpmaster.internal xenial-security/universe Translation-en [28 B] Get:13 http://ftpmaster.internal xenial-updates/main ppc64el Packages [28 B] Get:14 http://ftpmaster.internal xenial-updates/universe ppc64el Packages [28 B] Get:15 http://ftpmaster.internal xenial-updates/main Translation-en [28 B] Get:16 http://ftpmaster.internal xenial-updates/universe Translation-en [28 B] Get:17 http://ftpmaster.internal xenial-proposed/main ppc64el Packages [96.7 kB] Get:18 http://ftpmaster.internal xenial-proposed/universe ppc64el Packages [360 kB] Get:19 http://ftpmaster.internal xenial-proposed/main Translation-en [44.2 kB] Get:20 http://ftpmaster.internal xenial-proposed/universe Translation-en [244 kB] Fetched 15.2 MB in 7s (1973 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libapt-pkg4.16 libisl13 libprocps3 udev Use 'apt-get autoremove' to remove them. The following NEW packages will be installed: libapt-pkg5.0 libisl15 libprocps4 The following packages will be upgraded: advancecomp apt apt-transport-https base-files binutils bsdutils cpp cpp-5 debconf diffutils dmsetup dpkg dpkg-dev e2fslibs e2fsprogs findutils g++ g++-5 gcc gcc-5 gcc-5-base gnupg gpgv grep hostname init initscripts libapparmor1 libasan2 libatomic1 libaudit-common libaudit1 libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap2 libcap2-bin libcc1-0 libcomerr2 libcurl3-gnutls libdbus-1-3 libdebconfclient0 libdevmapper1.02.1 libdpkg-perl libfdisk1 libgcc-5-dev libgcc1 libgcrypt20 libgmp10 libgnutls-deb0-28 libgomp1 libgpg-error0 libgssapi-krb5-2 libidn11 libitm1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libmount1 libncurses5 libncursesw5 libpng12-0 libselinux1 libsemanage-common libsemanage1 libsepol1 libsmartcols1 libsqlite3-0 libss2 libssl1.0.0 libstdc++-5-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo5 libubsan0 libudev1 libuuid1 linux-libc-dev lsb-base mount multiarch-support ncurses-base ncurses-bin openssl pkg-create-dbgsym pkgbinarymangler procps systemd systemd-sysv sysv-rc sysvinit-utils tar udev util-linux 98 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 120 MB of archives. After this operation, 321 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu/ xenial/main base-files ppc64el 9.4ubuntu3 [67.8 kB] Get:2 http://ftpmaster.internal/ubuntu/ xenial/main bsdutils ppc64el 1:2.27.1-1ubuntu3 [50.1 kB] Get:3 http://ftpmaster.internal/ubuntu/ xenial/main diffutils ppc64el 1:3.3-2 [158 kB] Get:4 http://ftpmaster.internal/ubuntu/ xenial/main dpkg ppc64el 1.18.3ubuntu1 [2094 kB] Get:5 http://ftpmaster.internal/ubuntu/ xenial/main libc6-dev ppc64el 2.21-0ubuntu5 [1994 kB] Get:6 http://ftpmaster.internal/ubuntu/ xenial/main libc-dev-bin ppc64el 2.21-0ubuntu5 [64.9 kB] Get:7 http://ftpmaster.internal/ubuntu/ xenial-proposed/main linux-libc-dev ppc64el 4.3.0-3.12 [804 kB] Get:8 http://ftpmaster.internal/ubuntu/ xenial/main libcap2 ppc64el 1:2.24-12 [13.3 kB] Get:9 http://ftpmaster.internal/ubuntu/ xenial/main libc-bin ppc64el 2.21-0ubuntu5 [1168 kB] Get:10 http://ftpmaster.internal/ubuntu/ xenial/main libgomp1 ppc64el 5.3.1-3ubuntu1 [50.3 kB] Get:11 http://ftpmaster.internal/ubuntu/ xenial/main libitm1 ppc64el 5.3.1-3ubuntu1 [27.3 kB] Get:12 http://ftpmaster.internal/ubuntu/ xenial/main libatomic1 ppc64el 5.3.1-3ubuntu1 [7976 B] Get:13 http://ftpmaster.internal/ubuntu/ xenial/main libasan2 ppc64el 5.3.1-3ubuntu1 [237 kB] Get:14 http://ftpmaster.internal/ubuntu/ xenial/main gcc-5-base ppc64el 5.3.1-3ubuntu1 [16.4 kB] Get:15 http://ftpmaster.internal/ubuntu/ xenial/main libgcc1 ppc64el 1:5.3.1-3ubuntu1 [27.5 kB] Get:16 http://ftpmaster.internal/ubuntu/ xenial/main libubsan0 ppc64el 5.3.1-3ubuntu1 [95.9 kB] Get:17 http://ftpmaster.internal/ubuntu/ xenial/main libisl15 ppc64el 0.15-3 [497 kB] Get:18 http://ftpmaster.internal/ubuntu/ xenial/main cpp-5 ppc64el 5.3.1-3ubuntu1 [27.9 MB] Get:19 http://ftpmaster.internal/ubuntu/ xenial/main libcc1-0 ppc64el 5.3.1-3ubuntu1 [43.6 kB] Get:20 http://ftpmaster.internal/ubuntu/ xenial-proposed/main binutils ppc64el 2.25.90.20151209-1ubuntu1 [2192 kB] Get:21 http://ftpmaster.internal/ubuntu/ xenial/main g++-5 ppc64el 5.3.1-3ubuntu1 [30.1 MB] Get:22 http://ftpmaster.internal/ubuntu/ xenial/main gcc-5 ppc64el 5.3.1-3ubuntu1 [28.2 MB] Get:23 http://ftpmaster.internal/ubuntu/ xenial/main libgcc-5-dev ppc64el 5.3.1-3ubuntu1 [577 kB] Get:24 http://ftpmaster.internal/ubuntu/ xenial/main libstdc++-5-dev ppc64el 5.3.1-3ubuntu1 [1395 kB] Get:25 http://ftpmaster.internal/ubuntu/ xenial/main libstdc++6 ppc64el 5.3.1-3ubuntu1 [409 kB] Get:26 http://ftpmaster.internal/ubuntu/ xenial/main libgmp10 ppc64el 2:6.1.0+dfsg-2 [226 kB] Get:27 http://ftpmaster.internal/ubuntu/ xenial/main libc6 ppc64el 2.21-0ubuntu5 [5184 kB] Get:28 http://ftpmaster.internal/ubuntu/ xenial/main e2fslibs ppc64el 1.42.13-1ubuntu1 [192 kB] Get:29 http://ftpmaster.internal/ubuntu/ xenial/main e2fsprogs ppc64el 1.42.13-1ubuntu1 [763 kB] Get:30 http://ftpmaster.internal/ubuntu/ xenial/main findutils ppc64el 4.4.2-10 [284 kB] Get:31 http://ftpmaster.internal/ubuntu/ xenial-proposed/main grep ppc64el 2.22-1 [143 kB] Get:32 http://ftpmaster.internal/ubuntu/ xenial/main hostname ppc64el 3.16ubuntu2 [11.4 kB] Get:33 http://ftpmaster.internal/ubuntu/ xenial/main init ppc64el 1.24ubuntu2 [3970 B] Get:34 http://ftpmaster.internal/ubuntu/ xenial/main libsmartcols1 ppc64el 2.27.1-1ubuntu3 [58.0 kB] Get:35 http://ftpmaster.internal/ubuntu/ xenial/main libuuid1 ppc64el 2.27.1-1ubuntu3 [15.0 kB] Get:36 http://ftpmaster.internal/ubuntu/ xenial/main libblkid1 ppc64el 2.27.1-1ubuntu3 [99.2 kB] Get:37 http://ftpmaster.internal/ubuntu/ xenial/main libfdisk1 ppc64el 2.27.1-1ubuntu3 [129 kB] Get:38 http://ftpmaster.internal/ubuntu/ xenial/main debconf all 1.5.58ubuntu1 [136 kB] Get:39 http://ftpmaster.internal/ubuntu/ xenial/main sysvinit-utils ppc64el 2.88dsf-59.2ubuntu3 [25.7 kB] Get:40 http://ftpmaster.internal/ubuntu/ xenial/main sysv-rc all 2.88dsf-59.2ubuntu3 [36.1 kB] Get:41 http://ftpmaster.internal/ubuntu/ xenial/main initscripts ppc64el 2.88dsf-59.2ubuntu3 [24.8 kB] Get:42 http://ftpmaster.internal/ubuntu/ xenial/main util-linux ppc64el 2.27.1-1ubuntu3 [803 kB] Get:43 http://ftpmaster.internal/ubuntu/ xenial-proposed/main libudev1 ppc64el 228-2ubuntu2 [55.0 kB] Get:44 http://ftpmaster.internal/ubuntu/ xenial-proposed/main udev ppc64el 228-2ubuntu2 [973 kB] Get:45 http://ftpmaster.internal/ubuntu/ xenial-proposed/main libsystemd0 ppc64el 228-2ubuntu2 [197 kB] Get:46 http://ftpmaster.internal/ubuntu/ xenial-proposed/main systemd ppc64el 228-2ubuntu2 [3543 kB] Get:47 http://ftpmaster.internal/ubuntu/ xenial/main libselinux1 ppc64el 2.4-3 [54.7 kB] Get:48 http://ftpmaster.internal/ubuntu/ xenial/main libtinfo5 ppc64el 6.0+20151024-2ubuntu1 [79.4 kB] Get:49 http://ftpmaster.internal/ubuntu/ xenial/main libncurses5 ppc64el 6.0+20151024-2ubuntu1 [97.2 kB] Get:50 http://ftpmaster.internal/ubuntu/ xenial/main libncursesw5 ppc64el 6.0+20151024-2ubuntu1 [111 kB] Get:51 http://ftpmaster.internal/ubuntu/ xenial/main libprocps4 ppc64el 2:3.3.10-4ubuntu1 [32.2 kB] Get:52 http://ftpmaster.internal/ubuntu/ xenial/main procps ppc64el 2:3.3.10-4ubuntu1 [222 kB] Get:53 http://ftpmaster.internal/ubuntu/ xenial/main libapparmor1 ppc64el 2.10-0ubuntu8 [29.0 kB] Get:54 http://ftpmaster.internal/ubuntu/ xenial/main libaudit-common all 1:2.4.4-4ubuntu1 [3892 B] Get:55 http://ftpmaster.internal/ubuntu/ xenial/main libaudit1 ppc64el 1:2.4.4-4ubuntu1 [38.9 kB] Get:56 http://ftpmaster.internal/ubuntu/ xenial/main libmount1 ppc64el 2.27.1-1ubuntu3 [104 kB] Get:57 http://ftpmaster.internal/ubuntu/ xenial/main libcap2-bin ppc64el 1:2.24-12 [20.1 kB] Get:58 http://ftpmaster.internal/ubuntu/ xenial/main lsb-base all 9.20150917ubuntu1 [13.4 kB] Get:59 http://ftpmaster.internal/ubuntu/ xenial/main mount ppc64el 2.27.1-1ubuntu3 [115 kB] Get:60 http://ftpmaster.internal/ubuntu/ xenial/main ncurses-bin ppc64el 6.0+20151024-2ubuntu1 [136 kB] Get:61 http://ftpmaster.internal/ubuntu/ xenial/main tar ppc64el 1.28-2.1 [222 kB] Get:62 http://ftpmaster.internal/ubuntu/ xenial/main libapt-pkg5.0 ppc64el 1.1.4 [719 kB] Get:63 http://ftpmaster.internal/ubuntu/ xenial/main apt ppc64el 1.1.4 [995 kB] Get:64 http://ftpmaster.internal/ubuntu/ xenial/main gpgv ppc64el 1.4.19-6ubuntu1 [176 kB] Get:65 http://ftpmaster.internal/ubuntu/ xenial/main gnupg ppc64el 1.4.19-6ubuntu1 [658 kB] Get:66 http://ftpmaster.internal/ubuntu/ xenial/main ncurses-base all 6.0+20151024-2ubuntu1 [17.1 kB] Get:67 http://ftpmaster.internal/ubuntu/ xenial-proposed/main systemd-sysv ppc64el 228-2ubuntu2 [15.1 kB] Get:68 http://ftpmaster.internal/ubuntu/ xenial-proposed/main dmsetup ppc64el 2:1.02.110-1ubuntu1 [56.8 kB] Get:69 http://ftpmaster.internal/ubuntu/ xenial-proposed/main libdevmapper1.02.1 ppc64el 2:1.02.110-1ubuntu1 [134 kB] Get:70 http://ftpmaster.internal/ubuntu/ xenial/main libcomerr2 ppc64el 1.42.13-1ubuntu1 [65.6 kB] Get:71 http://ftpmaster.internal/ubuntu/ xenial/main libdebconfclient0 ppc64el 0.198ubuntu1 [6282 B] Get:72 http://ftpmaster.internal/ubuntu/ xenial/main libgpg-error0 ppc64el 1.20-1 [35.2 kB] Get:73 http://ftpmaster.internal/ubuntu/ xenial/main libgcrypt20 ppc64el 1.6.4-3 [355 kB] Get:74 http://ftpmaster.internal/ubuntu/ xenial/main libsepol1 ppc64el 2.4-2 [172 kB] Get:75 http://ftpmaster.internal/ubuntu/ xenial-proposed/main libsemanage-common all 2.4-3 [6744 B] Get:76 http://ftpmaster.internal/ubuntu/ xenial-proposed/main libsemanage1 ppc64el 2.4-3 [73.0 kB] Get:77 http://ftpmaster.internal/ubuntu/ xenial/main libss2 ppc64el 1.42.13-1ubuntu1 [69.6 kB] Get:78 http://ftpmaster.internal/ubuntu/ xenial/main multiarch-support ppc64el 2.21-0ubuntu5 [7186 B] Get:79 http://ftpmaster.internal/ubuntu/ xenial/main libtasn1-6 ppc64el 4.7-2 [42.8 kB] Get:80 http://ftpmaster.internal/ubuntu/ xenial/main libgnutls-deb0-28 ppc64el 3.3.18-1ubuntu1 [444 kB] Get:81 http://ftpmaster.internal/ubuntu/ xenial/main libpng12-0 ppc64el 1.2.54-1 [120 kB] Get:82 http://ftpmaster.internal/ubuntu/ xenial/main libsqlite3-0 ppc64el 3.9.2-1 [359 kB] Get:83 http://ftpmaster.internal/ubuntu/ xenial/main libssl1.0.0 ppc64el 1.0.2e-1ubuntu1 [830 kB] Get:84 http://ftpmaster.internal/ubuntu/ xenial/main libgssapi-krb5-2 ppc64el 1.13.2+dfsg-4 [109 kB] Get:85 http://ftpmaster.internal/ubuntu/ xenial/main libkrb5-3 ppc64el 1.13.2+dfsg-4 [269 kB] Get:86 http://ftpmaster.internal/ubuntu/ xenial/main libkrb5support0 ppc64el 1.13.2+dfsg-4 [29.7 kB] Get:87 http://ftpmaster.internal/ubuntu/ xenial/main libk5crypto3 ppc64el 1.13.2+dfsg-4 [98.3 kB] Get:88 http://ftpmaster.internal/ubuntu/ xenial/main libkeyutils1 ppc64el 1.5.9-8ubuntu1 [9812 B] Get:89 http://ftpmaster.internal/ubuntu/ xenial/main libidn11 ppc64el 1.32-3ubuntu1 [45.6 kB] Get:90 http://ftpmaster.internal/ubuntu/ xenial/main libcurl3-gnutls ppc64el 7.45.0-1ubuntu1 [175 kB] Get:91 http://ftpmaster.internal/ubuntu/ xenial/main apt-transport-https ppc64el 1.1.4 [30.0 kB] Get:92 http://ftpmaster.internal/ubuntu/ xenial/main libdbus-1-3 ppc64el 1.10.6-1ubuntu1 [156 kB] Get:93 http://ftpmaster.internal/ubuntu/ xenial/main openssl ppc64el 1.0.2e-1ubuntu1 [480 kB] Get:94 http://ftpmaster.internal/ubuntu/ xenial/main advancecomp ppc64el 1.20-1 [201 kB] Get:95 http://ftpmaster.internal/ubuntu/ xenial/main cpp ppc64el 4:5.2.1-16ubuntu2 [27.6 kB] Get:96 http://ftpmaster.internal/ubuntu/ xenial/main dpkg-dev all 1.18.3ubuntu1 [583 kB] Get:97 http://ftpmaster.internal/ubuntu/ xenial/main libdpkg-perl all 1.18.3ubuntu1 [195 kB] Get:98 http://ftpmaster.internal/ubuntu/ xenial/main gcc ppc64el 4:5.2.1-16ubuntu2 [5224 B] Get:99 http://ftpmaster.internal/ubuntu/ xenial/main g++ ppc64el 4:5.2.1-16ubuntu2 [1502 B] Get:100 http://ftpmaster.internal/ubuntu/ xenial/main pkg-create-dbgsym all 0.70 [9046 B] Get:101 http://ftpmaster.internal/ubuntu/ xenial/main pkgbinarymangler all 125 [41.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 120 MB in 5s (22.0 MB/s) (Reading database ... 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Updating /etc/profile to current default. Updating /etc/nsswitch.conf to current default. Updating /root/.profile to current default. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11575 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.27.1-1ubuntu3_ppc64el.deb ... Unpacking bsdutils (1:2.27.1-1ubuntu3) over (1:2.26.2-6ubuntu3) ... Setting up bsdutils (1:2.27.1-1ubuntu3) ... (Reading database ... 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Unpacking libstdc++6:ppc64el (5.3.1-3ubuntu1) over (5.2.1-22ubuntu2) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libstdc++6:ppc64el (5.3.1-3ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11549 files and directories currently installed.) Preparing to unpack .../libgmp10_2%3a6.1.0+dfsg-2_ppc64el.deb ... Unpacking libgmp10:ppc64el (2:6.1.0+dfsg-2) over (2:6.0.0+dfsg-7) ... Preparing to unpack .../libc6_2.21-0ubuntu5_ppc64el.deb ... Unpacking libc6:ppc64el (2.21-0ubuntu5) over (2.21-0ubuntu4) ... Setting up libc6:ppc64el (2.21-0ubuntu5) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11549 files and directories currently installed.) Preparing to unpack .../e2fslibs_1.42.13-1ubuntu1_ppc64el.deb ... Unpacking e2fslibs:ppc64el (1.42.13-1ubuntu1) over (1.42.12-1ubuntu2) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up e2fslibs:ppc64el (1.42.13-1ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11549 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.42.13-1ubuntu1_ppc64el.deb ... Unpacking e2fsprogs (1.42.13-1ubuntu1) over (1.42.12-1ubuntu2) ... Setting up e2fsprogs (1.42.13-1ubuntu1) ... Installing new version of config file /etc/mke2fs.conf ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11550 files and directories currently installed.) Preparing to unpack .../findutils_4.4.2-10_ppc64el.deb ... Unpacking findutils (4.4.2-10) over (4.4.2-9build1) ... Setting up findutils (4.4.2-10) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11559 files and directories currently installed.) Preparing to unpack .../udev_228-2ubuntu2_ppc64el.deb ... Unpacking udev (228-2ubuntu2) over (225-1ubuntu9) ... Preparing to unpack .../libsystemd0_228-2ubuntu2_ppc64el.deb ... Unpacking libsystemd0:ppc64el (228-2ubuntu2) over (225-1ubuntu9) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libsystemd0:ppc64el (228-2ubuntu2) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11559 files and directories currently installed.) Preparing to unpack .../systemd_228-2ubuntu2_ppc64el.deb ... Unpacking systemd (228-2ubuntu2) over (225-1ubuntu9) ... Setting up systemd (228-2ubuntu2) ... Installing new version of config file /etc/pam.d/systemd-user ... Installing new version of config file /etc/systemd/journald.conf ... Installing new version of config file /etc/systemd/logind.conf ... Installing new version of config file /etc/systemd/system.conf ... addgroup: The group `systemd-journal' already exists as a system group. Exiting. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11560 files and directories currently installed.) Preparing to unpack .../libselinux1_2.4-3_ppc64el.deb ... Unpacking libselinux1:ppc64el (2.4-3) over (2.3-2build1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libselinux1:ppc64el (2.4-3) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11560 files and directories currently installed.) Preparing to unpack .../libtinfo5_6.0+20151024-2ubuntu1_ppc64el.deb ... Unpacking libtinfo5:ppc64el (6.0+20151024-2ubuntu1) over (5.9+20150516-2ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libtinfo5:ppc64el (6.0+20151024-2ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11560 files and directories currently installed.) Preparing to unpack .../libncurses5_6.0+20151024-2ubuntu1_ppc64el.deb ... Unpacking libncurses5:ppc64el (6.0+20151024-2ubuntu1) over (5.9+20150516-2ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libncurses5:ppc64el (6.0+20151024-2ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11560 files and directories currently installed.) Preparing to unpack .../libncursesw5_6.0+20151024-2ubuntu1_ppc64el.deb ... Unpacking libncursesw5:ppc64el (6.0+20151024-2ubuntu1) over (5.9+20150516-2ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libncursesw5:ppc64el (6.0+20151024-2ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Selecting previously unselected package libprocps4:ppc64el. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11560 files and directories currently installed.) Preparing to unpack .../libprocps4_2%3a3.3.10-4ubuntu1_ppc64el.deb ... Unpacking libprocps4:ppc64el (2:3.3.10-4ubuntu1) ... Preparing to unpack .../procps_2%3a3.3.10-4ubuntu1_ppc64el.deb ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of stop. Unpacking procps (2:3.3.10-4ubuntu1) over (1:3.3.9-1ubuntu8) ... Preparing to unpack .../libapparmor1_2.10-0ubuntu8_ppc64el.deb ... Unpacking libapparmor1:ppc64el (2.10-0ubuntu8) over (2.10-0ubuntu6) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libapparmor1:ppc64el (2.10-0ubuntu8) ... Processing triggers for systemd (228-2ubuntu2) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11569 files and directories currently installed.) Preparing to unpack .../libaudit-common_1%3a2.4.4-4ubuntu1_all.deb ... Unpacking libaudit-common (1:2.4.4-4ubuntu1) over (1:2.4.2-1ubuntu1) ... Setting up libaudit-common (1:2.4.4-4ubuntu1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11569 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a2.4.4-4ubuntu1_ppc64el.deb ... Unpacking libaudit1:ppc64el (1:2.4.4-4ubuntu1) over (1:2.4.2-1ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libaudit1:ppc64el (1:2.4.4-4ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11569 files and directories currently installed.) Preparing to unpack .../libmount1_2.27.1-1ubuntu3_ppc64el.deb ... Unpacking libmount1:ppc64el (2.27.1-1ubuntu3) over (2.26.2-6ubuntu3) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libmount1:ppc64el (2.27.1-1ubuntu3) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11569 files and directories currently installed.) Preparing to unpack .../libcap2-bin_1%3a2.24-12_ppc64el.deb ... Unpacking libcap2-bin (1:2.24-12) over (1:2.24-9) ... Setting up libcap2-bin (1:2.24-12) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11569 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.0+20151024-2ubuntu1_ppc64el.deb ... Unpacking ncurses-bin (6.0+20151024-2ubuntu1) over (5.9+20150516-2ubuntu1) ... Setting up ncurses-bin (6.0+20151024-2ubuntu1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11565 files and directories currently installed.) Preparing to unpack .../tar_1.28-2.1_ppc64el.deb ... Unpacking tar (1.28-2.1) over (1.27.1-2) ... Setting up tar (1.28-2.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11565 files and directories currently installed.) Preparing to unpack .../archives/apt_1.1.4_ppc64el.deb ... Unpacking apt (1.1.4) over (1.0.10.2ubuntu1) ... Selecting previously unselected package libapt-pkg5.0:ppc64el. Preparing to unpack .../libapt-pkg5.0_1.1.4_ppc64el.deb ... Unpacking libapt-pkg5.0:ppc64el (1.1.4) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libapt-pkg5.0:ppc64el (1.1.4) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11593 files and directories currently installed.) Preparing to unpack .../gpgv_1.4.19-6ubuntu1_ppc64el.deb ... Unpacking gpgv (1.4.19-6ubuntu1) over (1.4.18-7ubuntu1) ... Setting up gpgv (1.4.19-6ubuntu1) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11592 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.0+20151024-2ubuntu1_all.deb ... Unpacking ncurses-base (6.0+20151024-2ubuntu1) over (5.9+20150516-2ubuntu1) ... Setting up ncurses-base (6.0+20151024-2ubuntu1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11593 files and directories currently installed.) Preparing to unpack .../systemd-sysv_228-2ubuntu2_ppc64el.deb ... Unpacking systemd-sysv (228-2ubuntu2) over (225-1ubuntu9) ... Setting up systemd-sysv (228-2ubuntu2) ... (Reading database ... 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Setting up libdevmapper1.02.1:ppc64el (2:1.02.110-1ubuntu1) ... Setting up dmsetup (2:1.02.110-1ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11593 files and directories currently installed.) Preparing to unpack .../libcomerr2_1.42.13-1ubuntu1_ppc64el.deb ... Unpacking libcomerr2:ppc64el (1.42.13-1ubuntu1) over (1.42.12-1ubuntu2) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libcomerr2:ppc64el (1.42.13-1ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11593 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.198ubuntu1_ppc64el.deb ... Unpacking libdebconfclient0:ppc64el (0.198ubuntu1) over (0.192ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libdebconfclient0:ppc64el (0.198ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11593 files and directories currently installed.) Preparing to unpack .../libgpg-error0_1.20-1_ppc64el.deb ... Unpacking libgpg-error0:ppc64el (1.20-1) over (1.19-2) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libgpg-error0:ppc64el (1.20-1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11593 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.6.4-3_ppc64el.deb ... Unpacking libgcrypt20:ppc64el (1.6.4-3) over (1.6.3-2ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libgcrypt20:ppc64el (1.6.4-3) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11593 files and directories currently installed.) Preparing to unpack .../libsemanage-common_2.4-3_all.deb ... Unpacking libsemanage-common (2.4-3) over (2.3-1build2) ... Setting up libsemanage-common (2.4-3) ... Installing new version of config file /etc/selinux/semanage.conf ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11593 files and directories currently installed.) Preparing to unpack .../libss2_1.42.13-1ubuntu1_ppc64el.deb ... Unpacking libss2:ppc64el (1.42.13-1ubuntu1) over (1.42.12-1ubuntu2) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libss2:ppc64el (1.42.13-1ubuntu1) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11593 files and directories currently installed.) Preparing to unpack .../multiarch-support_2.21-0ubuntu5_ppc64el.deb ... Unpacking multiarch-support (2.21-0ubuntu5) over (2.21-0ubuntu4) ... Setting up multiarch-support (2.21-0ubuntu5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11593 files and directories currently installed.) Preparing to unpack .../libtasn1-6_4.7-2_ppc64el.deb ... Unpacking libtasn1-6:ppc64el (4.7-2) over (4.5-2) ... Preparing to unpack .../libgnutls-deb0-28_3.3.18-1ubuntu1_ppc64el.deb ... Unpacking libgnutls-deb0-28:ppc64el (3.3.18-1ubuntu1) over (3.3.15-5ubuntu2) ... Preparing to unpack .../libpng12-0_1.2.54-1_ppc64el.deb ... Unpacking libpng12-0:ppc64el (1.2.54-1) over (1.2.51-0ubuntu3) ... Preparing to unpack .../libsqlite3-0_3.9.2-1_ppc64el.deb ... Unpacking libsqlite3-0:ppc64el (3.9.2-1) over (3.8.11.1-1) ... Preparing to unpack .../libssl1.0.0_1.0.2e-1ubuntu1_ppc64el.deb ... Unpacking libssl1.0.0:ppc64el (1.0.2e-1ubuntu1) over (1.0.2d-0ubuntu1) ... Preparing to unpack .../libgssapi-krb5-2_1.13.2+dfsg-4_ppc64el.deb ... Unpacking libgssapi-krb5-2:ppc64el (1.13.2+dfsg-4) over (1.13.2+dfsg-2) ... Preparing to unpack .../libkrb5-3_1.13.2+dfsg-4_ppc64el.deb ... Unpacking libkrb5-3:ppc64el (1.13.2+dfsg-4) over (1.13.2+dfsg-2) ... Preparing to unpack .../libkrb5support0_1.13.2+dfsg-4_ppc64el.deb ... Unpacking libkrb5support0:ppc64el (1.13.2+dfsg-4) over (1.13.2+dfsg-2) ... Preparing to unpack .../libk5crypto3_1.13.2+dfsg-4_ppc64el.deb ... Unpacking libk5crypto3:ppc64el (1.13.2+dfsg-4) over (1.13.2+dfsg-2) ... Preparing to unpack .../libkeyutils1_1.5.9-8ubuntu1_ppc64el.deb ... Unpacking libkeyutils1:ppc64el (1.5.9-8ubuntu1) over (1.5.9-5ubuntu1) ... 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Unpacking dpkg-dev (1.18.3ubuntu1) over (1.18.2ubuntu5) ... Preparing to unpack .../libdpkg-perl_1.18.3ubuntu1_all.deb ... Unpacking libdpkg-perl (1.18.3ubuntu1) over (1.18.2ubuntu5) ... Preparing to unpack .../gcc_4%3a5.2.1-16ubuntu2_ppc64el.deb ... Removing old gcc doc directory. Unpacking gcc (4:5.2.1-16ubuntu2) over (4:5.2.1-3ubuntu1) ... Preparing to unpack .../g++_4%3a5.2.1-16ubuntu2_ppc64el.deb ... Unpacking g++ (4:5.2.1-16ubuntu2) over (4:5.2.1-3ubuntu1) ... Preparing to unpack .../pkg-create-dbgsym_0.70_all.deb ... Unpacking pkg-create-dbgsym (0.70) over (0.69) ... Preparing to unpack .../pkgbinarymangler_125_all.deb ... Unpacking pkgbinarymangler (125) over (122) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libc-dev-bin (2.21-0ubuntu5) ... Setting up linux-libc-dev:ppc64el (4.3.0-3.12) ... Setting up libc6-dev:ppc64el (2.21-0ubuntu5) ... Setting up libgomp1:ppc64el (5.3.1-3ubuntu1) ... Setting up libitm1:ppc64el (5.3.1-3ubuntu1) ... Setting up libatomic1:ppc64el (5.3.1-3ubuntu1) ... Setting up libasan2:ppc64el (5.3.1-3ubuntu1) ... Setting up libubsan0:ppc64el (5.3.1-3ubuntu1) ... Setting up libgmp10:ppc64el (2:6.1.0+dfsg-2) ... Setting up libisl15:ppc64el (0.15-3) ... Setting up cpp-5 (5.3.1-3ubuntu1) ... Setting up libcc1-0:ppc64el (5.3.1-3ubuntu1) ... Setting up binutils (2.25.90.20151209-1ubuntu1) ... Setting up libgcc-5-dev:ppc64el (5.3.1-3ubuntu1) ... Setting up gcc-5 (5.3.1-3ubuntu1) ... Setting up libstdc++-5-dev:ppc64el (5.3.1-3ubuntu1) ... Setting up g++-5 (5.3.1-3ubuntu1) ... Setting up libprocps4:ppc64el (2:3.3.10-4ubuntu1) ... Setting up procps (2:3.3.10-4ubuntu1) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up udev (228-2ubuntu2) ... Installing new version of config file /etc/init.d/udev ... addgroup: The group `input' already exists as a system group. Exiting. virtio network devices detected, disabling predictable interface names in /etc/systemd/network/50-virtio-kernel-names.link Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of restart. Removing obsolete conffile /etc/init.d/lvm2 ... Setting up apt (1.1.4) ... Installing new version of config file /etc/apt/apt.conf.d/01-vendor-ubuntu ... Installing new version of config file /etc/apt/apt.conf.d/01autoremove ... Installing new version of config file /etc/cron.daily/apt ... Installing new version of config file /etc/kernel/postinst.d/apt-auto-removal ... usermod: no changes Setting up libtasn1-6:ppc64el (4.7-2) ... Setting up libgnutls-deb0-28:ppc64el (3.3.18-1ubuntu1) ... Setting up libpng12-0:ppc64el (1.2.54-1) ... Setting up libsqlite3-0:ppc64el (3.9.2-1) ... Setting up libssl1.0.0:ppc64el (1.0.2e-1ubuntu1) ... Setting up libkrb5support0:ppc64el (1.13.2+dfsg-4) ... Setting up libk5crypto3:ppc64el (1.13.2+dfsg-4) ... Setting up libkeyutils1:ppc64el (1.5.9-8ubuntu1) ... Setting up libkrb5-3:ppc64el (1.13.2+dfsg-4) ... Setting up libgssapi-krb5-2:ppc64el (1.13.2+dfsg-4) ... Setting up libidn11:ppc64el (1.32-3ubuntu1) ... Setting up libcurl3-gnutls:ppc64el (7.45.0-1ubuntu1) ... Setting up apt-transport-https (1.1.4) ... Setting up libdbus-1-3:ppc64el (1.10.6-1ubuntu1) ... Setting up openssl (1.0.2e-1ubuntu1) ... Setting up advancecomp (1.20-1) ... Setting up cpp (4:5.2.1-16ubuntu2) ... Setting up libdpkg-perl (1.18.3ubuntu1) ... Setting up dpkg-dev (1.18.3ubuntu1) ... Setting up gcc (4:5.2.1-16ubuntu2) ... Setting up g++ (4:5.2.1-16ubuntu2) ... Setting up pkg-create-dbgsym (0.70) ... Setting up pkgbinarymangler (125) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Processing triggers for systemd (228-2ubuntu2) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-8424439', 'ppc64el', 'xenial-proposed', '-c', 'chroot:autobuild', '--arch=ppc64el', '--dist=xenial-proposed', '--purge=never', '--nolog', 'ncbi-blast+_2.2.31-1.dsc'] Initiating build PACKAGEBUILD-8424439 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.2.0-19-generic #23-Ubuntu SMP Wed Nov 11 11:38:17 UTC 2015 ppc64le sbuild (Debian sbuild) 0.65.2 (24 Mar 2015) on bos01-ppc64el-001.buildd ╔══════════════════════════════════════════════════════════════════════════════╗ ║ ncbi-blast+ 2.2.31-1 (ppc64el) 10 Dec 2015 23:11 ║ ╚══════════════════════════════════════════════════════════════════════════════╝ Package: ncbi-blast+ Version: 2.2.31-1 Source Version: 2.2.31-1 Distribution: xenial-proposed Machine Architecture: ppc64el Host Architecture: ppc64el Build Architecture: ppc64el I: NOTICE: Log filtering will replace 'build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31' with '«PKGBUILDDIR»' I: NOTICE: Log filtering will replace 'build/ncbi-blast+-spxF_z' with '«BUILDDIR»' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-8424439/chroot-autobuild' with '«CHROOT»' ┌──────────────────────────────────────────────────────────────────────────────┐ │ Fetch source files │ └──────────────────────────────────────────────────────────────────────────────┘ Local sources ───────────── ncbi-blast+_2.2.31-1.dsc exists in .; copying to chroot Check architectures ─────────────────── Check dependencies ────────────────── Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot grep: debian/control: No such file or directory /usr/bin/pkgsanitychecks: Error: not in source package directory /usr/bin/pkgstriptranslations: Error: not in source package directory /usr/bin/pkgmaintainermangler: Error: not in source package directory /usr/bin/pkgstripfiles: Error: not in source package directory dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/build/ncbi-blast+-spxF_z/resolver-jD7QuP/apt_archive/sbuild-build-depends-core-dummy.deb'. Get:1 file:/build/ncbi-blast+-spxF_z/resolver-jD7QuP/apt_archive ./ InRelease Ign:1 file:/build/ncbi-blast+-spxF_z/resolver-jD7QuP/apt_archive ./ InRelease Get:2 file:/build/ncbi-blast+-spxF_z/resolver-jD7QuP/apt_archive ./ Release [2119 B] Get:2 file:/build/ncbi-blast+-spxF_z/resolver-jD7QuP/apt_archive ./ Release [2119 B] Get:3 file:/build/ncbi-blast+-spxF_z/resolver-jD7QuP/apt_archive ./ Release.gpg Ign:3 file:/build/ncbi-blast+-spxF_z/resolver-jD7QuP/apt_archive ./ Release.gpg Get:4 file:/build/ncbi-blast+-spxF_z/resolver-jD7QuP/apt_archive ./ Sources [208 B] Get:5 file:/build/ncbi-blast+-spxF_z/resolver-jD7QuP/apt_archive ./ Packages [527 B] Ign:4 file:/build/ncbi-blast+-spxF_z/resolver-jD7QuP/apt_archive ./ Sources Get:4 file:/build/ncbi-blast+-spxF_z/resolver-jD7QuP/apt_archive ./ Sources [208 B] Ign:5 file:/build/ncbi-blast+-spxF_z/resolver-jD7QuP/apt_archive ./ Packages Get:5 file:/build/ncbi-blast+-spxF_z/resolver-jD7QuP/apt_archive ./ Packages [527 B] Reading package lists... W: The repository 'file:/build/ncbi-blast+-spxF_z/resolver-jD7QuP/apt_archive ./ Release' is not signed. Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install core build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libapt-pkg4.16 libisl13 libprocps3 udev Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/772 B of archives. After this operation, 0 B of additional disk space will be used. WARNING: The following packages cannot be authenticated! sbuild-build-depends-core-dummy Authentication warning overridden. Get:1 file:/build/ncbi-blast+-spxF_z/resolver-jD7QuP/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [772 B] debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11589 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, init, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:5.2), g++ (>= 4:5.2), make, dpkg-dev (>= 1.17.11), autotools-dev (>= 20100122), debhelper (>= 9), dpkg-dev (>= 1.16.1), libboost-test-dev, libbz2-dev, libpcre3-dev, quilt, time, zlib1g-dev Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, init, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:5.2), g++ (>= 4:5.2), make, dpkg-dev (>= 1.17.11), autotools-dev (>= 20100122), debhelper (>= 9), dpkg-dev (>= 1.16.1), libboost-test-dev, libbz2-dev, libpcre3-dev, quilt, time, zlib1g-dev grep: debian/control: No such file or directory /usr/bin/pkgsanitychecks: Error: not in source package directory /usr/bin/pkgstriptranslations: Error: not in source package directory /usr/bin/pkgmaintainermangler: Error: not in source package directory /usr/bin/pkgstripfiles: Error: not in source package directory dpkg-deb: building package 'sbuild-build-depends-ncbi-blast+-dummy' in '/build/ncbi-blast+-spxF_z/resolver-68HVeZ/apt_archive/sbuild-build-depends-ncbi-blast+-dummy.deb'. Get:1 file:/build/ncbi-blast+-spxF_z/resolver-68HVeZ/apt_archive ./ InRelease Ign:1 file:/build/ncbi-blast+-spxF_z/resolver-68HVeZ/apt_archive ./ InRelease Get:2 file:/build/ncbi-blast+-spxF_z/resolver-68HVeZ/apt_archive ./ Release [2119 B] Get:2 file:/build/ncbi-blast+-spxF_z/resolver-68HVeZ/apt_archive ./ Release [2119 B] Get:3 file:/build/ncbi-blast+-spxF_z/resolver-68HVeZ/apt_archive ./ Release.gpg Ign:3 file:/build/ncbi-blast+-spxF_z/resolver-68HVeZ/apt_archive ./ Release.gpg Get:4 file:/build/ncbi-blast+-spxF_z/resolver-68HVeZ/apt_archive ./ Sources [494 B] Get:5 file:/build/ncbi-blast+-spxF_z/resolver-68HVeZ/apt_archive ./ Packages [743 B] Ign:4 file:/build/ncbi-blast+-spxF_z/resolver-68HVeZ/apt_archive ./ Sources Get:4 file:/build/ncbi-blast+-spxF_z/resolver-68HVeZ/apt_archive ./ Sources [494 B] Ign:5 file:/build/ncbi-blast+-spxF_z/resolver-68HVeZ/apt_archive ./ Packages Get:5 file:/build/ncbi-blast+-spxF_z/resolver-68HVeZ/apt_archive ./ Packages [743 B] Reading package lists... W: The repository 'file:/build/ncbi-blast+-spxF_z/resolver-68HVeZ/apt_archive ./ Release' is not signed. Reading package lists... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Install ncbi-blast+ build dependencies (apt-based resolver) │ └──────────────────────────────────────────────────────────────────────────────┘ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libapt-pkg4.16 libisl13 libprocps3 udev Use 'sudo apt autoremove' to remove them. The following additional packages will be installed: autotools-dev bsdmainutils debhelper dh-strip-nondeterminism diffstat file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasprintf0v5 libboost-test-dev libboost-test1.58-dev libboost-test1.58.0 libboost1.58-dev libbz2-dev libcroco3 libfile-stripnondeterminism-perl libglib2.0-0 libicu55 libmagic1 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libtimedate-perl libunistring0 libxml2 man-db po-debconf quilt time zlib1g-dev Suggested packages: wamerican | wordlist whois vacation dh-make gettext-doc groff libboost1.58-doc libboost-atomic1.58-dev libboost-chrono1.58-dev libboost-context1.58-dev libboost-coroutine1.58-dev libboost-date-time1.58-dev libboost-exception1.58-dev libboost-filesystem1.58-dev libboost-graph1.58-dev libboost-graph-parallel1.58-dev libboost-iostreams1.58-dev libboost-locale1.58-dev libboost-log1.58-dev libboost-math1.58-dev libboost-mpi1.58-dev libboost-mpi-python1.58-dev libboost-program-options1.58-dev libboost-python1.58-dev libboost-random1.58-dev libboost-regex1.58-dev libboost-serialization1.58-dev libboost-signals1.58-dev libboost-system1.58-dev libboost-thread1.58-dev libboost-timer1.58-dev libboost-wave1.58-dev libboost1.58-tools-dev libmpfrc++-dev libntl-dev less www-browser libmail-box-perl procmail graphviz default-mta | mail-transport-agent Recommended packages: curl | wget | lynx-cur libasprintf-dev libgettextpo-dev bzip2-doc libglib2.0-data shared-mime-info xdg-user-dirs xml-core libmail-sendmail-perl less The following NEW packages will be installed: autotools-dev bsdmainutils debhelper dh-strip-nondeterminism diffstat file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasprintf0v5 libboost-test-dev libboost-test1.58-dev libboost-test1.58.0 libboost1.58-dev libbz2-dev libcroco3 libfile-stripnondeterminism-perl libglib2.0-0 libicu55 libmagic1 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1 libtimedate-perl libunistring0 libxml2 man-db po-debconf quilt sbuild-build-depends-ncbi-blast+-dummy time zlib1g-dev 0 upgraded, 36 newly installed, 0 to remove and 0 not upgraded. Need to get 22.5 MB/22.5 MB of archives. After this operation, 177 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! sbuild-build-depends-ncbi-blast+-dummy Authentication warning overridden. Get:1 file:/build/ncbi-blast+-spxF_z/resolver-68HVeZ/apt_archive ./ sbuild-build-depends-ncbi-blast+-dummy 0.invalid.0 [988 B] Get:2 http://ftpmaster.internal/ubuntu xenial/main ppc64el libasprintf0v5 ppc64el 0.19.4-1ubuntu3 [6832 B] Get:3 http://ftpmaster.internal/ubuntu xenial/main ppc64el groff-base ppc64el 1.22.3-4 [1367 kB] Get:4 http://ftpmaster.internal/ubuntu xenial/main ppc64el bsdmainutils ppc64el 9.0.6ubuntu1 [175 kB] Get:5 http://ftpmaster.internal/ubuntu xenial/main ppc64el libpipeline1 ppc64el 1.4.1-1 [24.0 kB] Get:6 http://ftpmaster.internal/ubuntu xenial/main ppc64el man-db ppc64el 2.7.5-1 [850 kB] Get:7 http://ftpmaster.internal/ubuntu xenial/main ppc64el libpcrecpp0v5 ppc64el 2:8.35-7.1ubuntu1 [16.1 kB] Get:8 http://ftpmaster.internal/ubuntu xenial/main ppc64el libunistring0 ppc64el 0.9.3-5.2ubuntu1 [269 kB] Get:9 http://ftpmaster.internal/ubuntu xenial/main ppc64el libmagic1 ppc64el 1:5.25-2ubuntu1 [220 kB] Get:10 http://ftpmaster.internal/ubuntu xenial/main ppc64el file ppc64el 1:5.25-2ubuntu1 [21.7 kB] Get:11 http://ftpmaster.internal/ubuntu xenial/main ppc64el gettext-base ppc64el 0.19.4-1ubuntu3 [47.2 kB] Get:12 http://ftpmaster.internal/ubuntu xenial/main ppc64el libglib2.0-0 ppc64el 2.47.3-3 [1039 kB] Get:13 http://ftpmaster.internal/ubuntu xenial/main ppc64el libicu55 ppc64el 55.1-6ubuntu1 [7740 kB] Get:14 http://ftpmaster.internal/ubuntu xenial-proposed/main ppc64el libxml2 ppc64el 2.9.2+zdfsg1-4ubuntu2 [611 kB] Get:15 http://ftpmaster.internal/ubuntu xenial/main ppc64el time ppc64el 1.7-25.1 [26.4 kB] Get:16 http://ftpmaster.internal/ubuntu xenial/main ppc64el autotools-dev all 20150820.1 [39.8 kB] Get:17 http://ftpmaster.internal/ubuntu xenial/main ppc64el libcroco3 ppc64el 0.6.9-1 [75.8 kB] Get:18 http://ftpmaster.internal/ubuntu xenial/main ppc64el gettext ppc64el 0.19.4-1ubuntu3 [874 kB] Get:19 http://ftpmaster.internal/ubuntu xenial/main ppc64el intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:20 http://ftpmaster.internal/ubuntu xenial/main ppc64el po-debconf all 1.0.18 [234 kB] Get:21 http://ftpmaster.internal/ubuntu xenial/main ppc64el libarchive-zip-perl all 1.53-1 [87.0 kB] Get:22 http://ftpmaster.internal/ubuntu xenial/main ppc64el libfile-stripnondeterminism-perl all 0.014-1 [10.1 kB] Get:23 http://ftpmaster.internal/ubuntu xenial/main ppc64el libtimedate-perl all 2.3000-2 [37.5 kB] Get:24 http://ftpmaster.internal/ubuntu xenial/main ppc64el dh-strip-nondeterminism all 0.014-1 [5596 B] Get:25 http://ftpmaster.internal/ubuntu xenial/main ppc64el debhelper all 9.20151126ubuntu1 [741 kB] Get:26 http://ftpmaster.internal/ubuntu xenial/main ppc64el diffstat ppc64el 1.60-1 [23.7 kB] Get:27 http://ftpmaster.internal/ubuntu xenial/main ppc64el libboost1.58-dev ppc64el 1.58.0+dfsg-3.1ubuntu1 [6242 kB] Get:28 http://ftpmaster.internal/ubuntu xenial/main ppc64el libboost-test1.58.0 ppc64el 1.58.0+dfsg-3.1ubuntu1 [170 kB] Get:29 http://ftpmaster.internal/ubuntu xenial/main ppc64el libboost-test1.58-dev ppc64el 1.58.0+dfsg-3.1ubuntu1 [227 kB] Get:30 http://ftpmaster.internal/ubuntu xenial/main ppc64el libboost-test-dev ppc64el 1.58.0.0ubuntu1 [2838 B] Get:31 http://ftpmaster.internal/ubuntu xenial/main ppc64el libbz2-dev ppc64el 1.0.6-8 [42.0 kB] Get:32 http://ftpmaster.internal/ubuntu xenial/main ppc64el libpcre16-3 ppc64el 2:8.35-7.1ubuntu1 [139 kB] Get:33 http://ftpmaster.internal/ubuntu xenial/main ppc64el libpcre32-3 ppc64el 2:8.35-7.1ubuntu1 [130 kB] Get:34 http://ftpmaster.internal/ubuntu xenial/main ppc64el libpcre3-dev ppc64el 2:8.35-7.1ubuntu1 [500 kB] Get:35 http://ftpmaster.internal/ubuntu xenial/main ppc64el quilt all 0.63-3 [272 kB] Get:36 http://ftpmaster.internal/ubuntu xenial/main ppc64el zlib1g-dev ppc64el 1:1.2.8.dfsg-2ubuntu4 [168 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 22.5 MB in 0s (40.0 MB/s) Selecting previously unselected package libasprintf0v5:ppc64el. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11589 files and directories currently installed.) Preparing to unpack .../libasprintf0v5_0.19.4-1ubuntu3_ppc64el.deb ... Unpacking libasprintf0v5:ppc64el (0.19.4-1ubuntu3) ... Selecting previously unselected package groff-base. Preparing to unpack .../groff-base_1.22.3-4_ppc64el.deb ... Unpacking groff-base (1.22.3-4) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../bsdmainutils_9.0.6ubuntu1_ppc64el.deb ... Unpacking bsdmainutils (9.0.6ubuntu1) ... Selecting previously unselected package libpipeline1:ppc64el. Preparing to unpack .../libpipeline1_1.4.1-1_ppc64el.deb ... Unpacking libpipeline1:ppc64el (1.4.1-1) ... Selecting previously unselected package man-db. Preparing to unpack .../man-db_2.7.5-1_ppc64el.deb ... Unpacking man-db (2.7.5-1) ... Selecting previously unselected package libpcrecpp0v5:ppc64el. Preparing to unpack .../libpcrecpp0v5_2%3a8.35-7.1ubuntu1_ppc64el.deb ... Unpacking libpcrecpp0v5:ppc64el (2:8.35-7.1ubuntu1) ... Selecting previously unselected package libunistring0:ppc64el. Preparing to unpack .../libunistring0_0.9.3-5.2ubuntu1_ppc64el.deb ... Unpacking libunistring0:ppc64el (0.9.3-5.2ubuntu1) ... Selecting previously unselected package libmagic1:ppc64el. Preparing to unpack .../libmagic1_1%3a5.25-2ubuntu1_ppc64el.deb ... Unpacking libmagic1:ppc64el (1:5.25-2ubuntu1) ... Selecting previously unselected package file. Preparing to unpack .../file_1%3a5.25-2ubuntu1_ppc64el.deb ... Unpacking file (1:5.25-2ubuntu1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../gettext-base_0.19.4-1ubuntu3_ppc64el.deb ... Unpacking gettext-base (0.19.4-1ubuntu3) ... Selecting previously unselected package libglib2.0-0:ppc64el. Preparing to unpack .../libglib2.0-0_2.47.3-3_ppc64el.deb ... Unpacking libglib2.0-0:ppc64el (2.47.3-3) ... Selecting previously unselected package libicu55:ppc64el. Preparing to unpack .../libicu55_55.1-6ubuntu1_ppc64el.deb ... Unpacking libicu55:ppc64el (55.1-6ubuntu1) ... Selecting previously unselected package libxml2:ppc64el. Preparing to unpack .../libxml2_2.9.2+zdfsg1-4ubuntu2_ppc64el.deb ... Unpacking libxml2:ppc64el (2.9.2+zdfsg1-4ubuntu2) ... Selecting previously unselected package time. Preparing to unpack .../time_1.7-25.1_ppc64el.deb ... Unpacking time (1.7-25.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../autotools-dev_20150820.1_all.deb ... Unpacking autotools-dev (20150820.1) ... Selecting previously unselected package libcroco3:ppc64el. Preparing to unpack .../libcroco3_0.6.9-1_ppc64el.deb ... Unpacking libcroco3:ppc64el (0.6.9-1) ... Selecting previously unselected package gettext. Preparing to unpack .../gettext_0.19.4-1ubuntu3_ppc64el.deb ... Unpacking gettext (0.19.4-1ubuntu3) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../intltool-debian_0.35.0+20060710.4_all.deb ... Unpacking intltool-debian (0.35.0+20060710.4) ... Selecting previously unselected package po-debconf. Preparing to unpack .../po-debconf_1.0.18_all.deb ... Unpacking po-debconf (1.0.18) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../libarchive-zip-perl_1.53-1_all.deb ... Unpacking libarchive-zip-perl (1.53-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../libfile-stripnondeterminism-perl_0.014-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (0.014-1) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../libtimedate-perl_2.3000-2_all.deb ... Unpacking libtimedate-perl (2.3000-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../dh-strip-nondeterminism_0.014-1_all.deb ... Unpacking dh-strip-nondeterminism (0.014-1) ... Selecting previously unselected package debhelper. Preparing to unpack .../debhelper_9.20151126ubuntu1_all.deb ... Unpacking debhelper (9.20151126ubuntu1) ... Selecting previously unselected package diffstat. Preparing to unpack .../diffstat_1.60-1_ppc64el.deb ... Unpacking diffstat (1.60-1) ... Selecting previously unselected package libboost1.58-dev:ppc64el. Preparing to unpack .../libboost1.58-dev_1.58.0+dfsg-3.1ubuntu1_ppc64el.deb ... Unpacking libboost1.58-dev:ppc64el (1.58.0+dfsg-3.1ubuntu1) ... Selecting previously unselected package libboost-test1.58.0:ppc64el. Preparing to unpack .../libboost-test1.58.0_1.58.0+dfsg-3.1ubuntu1_ppc64el.deb ... Unpacking libboost-test1.58.0:ppc64el (1.58.0+dfsg-3.1ubuntu1) ... Selecting previously unselected package libboost-test1.58-dev:ppc64el. Preparing to unpack .../libboost-test1.58-dev_1.58.0+dfsg-3.1ubuntu1_ppc64el.deb ... Unpacking libboost-test1.58-dev:ppc64el (1.58.0+dfsg-3.1ubuntu1) ... Selecting previously unselected package libboost-test-dev:ppc64el. Preparing to unpack .../libboost-test-dev_1.58.0.0ubuntu1_ppc64el.deb ... Unpacking libboost-test-dev:ppc64el (1.58.0.0ubuntu1) ... Selecting previously unselected package libbz2-dev:ppc64el. Preparing to unpack .../libbz2-dev_1.0.6-8_ppc64el.deb ... Unpacking libbz2-dev:ppc64el (1.0.6-8) ... Selecting previously unselected package libpcre16-3:ppc64el. 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Unpacking sbuild-build-depends-ncbi-blast+-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.21-0ubuntu5) ... Setting up libasprintf0v5:ppc64el (0.19.4-1ubuntu3) ... Setting up groff-base (1.22.3-4) ... Setting up bsdmainutils (9.0.6ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libpipeline1:ppc64el (1.4.1-1) ... Setting up man-db (2.7.5-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libpcrecpp0v5:ppc64el (2:8.35-7.1ubuntu1) ... Setting up libunistring0:ppc64el (0.9.3-5.2ubuntu1) ... Setting up libmagic1:ppc64el (1:5.25-2ubuntu1) ... Setting up file (1:5.25-2ubuntu1) ... Setting up gettext-base (0.19.4-1ubuntu3) ... Setting up libglib2.0-0:ppc64el (2.47.3-3) ... No schema files found: doing nothing. Setting up libicu55:ppc64el (55.1-6ubuntu1) ... 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Processing triggers for libc-bin (2.21-0ubuntu5) ... ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build environment │ └──────────────────────────────────────────────────────────────────────────────┘ Kernel: Linux 4.2.0-19-generic ppc64el (ppc64le) Toolchain package versions: binutils_2.25.90.20151209-1ubuntu1 dpkg-dev_1.18.3ubuntu1 g++-5_5.3.1-3ubuntu1 gcc-5_5.3.1-3ubuntu1 libc6-dev_2.21-0ubuntu5 libstdc++-5-dev_5.3.1-3ubuntu1 libstdc++6_5.3.1-3ubuntu1 linux-libc-dev_4.3.0-3.12 Package versions: adduser_3.113+nmu3ubuntu4 advancecomp_1.20-1 apt_1.1.4 apt-transport-https_1.1.4 autotools-dev_20150820.1 base-files_9.4ubuntu3 base-passwd_3.5.38 bash_4.3-14ubuntu1 binutils_2.25.90.20151209-1ubuntu1 bsdmainutils_9.0.6ubuntu1 bsdutils_1:2.27.1-1ubuntu3 build-essential_12.1ubuntu2 bzip2_1.0.6-8 ca-certificates_20150426ubuntu1 coreutils_8.23-4ubuntu2 cpp_4:5.2.1-16ubuntu2 cpp-5_5.3.1-3ubuntu1 dash_0.5.7-4ubuntu2 debconf_1.5.58ubuntu1 debhelper_9.20151126ubuntu1 debianutils_4.5.1 dh-strip-nondeterminism_0.014-1 diffstat_1.60-1 diffutils_1:3.3-2 dmsetup_2:1.02.110-1ubuntu1 dpkg_1.18.3ubuntu1 dpkg-dev_1.18.3ubuntu1 e2fslibs_1.42.13-1ubuntu1 e2fsprogs_1.42.13-1ubuntu1 fakeroot_1.20.2-1ubuntu1 file_1:5.25-2ubuntu1 findutils_4.4.2-10 g++_4:5.2.1-16ubuntu2 g++-5_5.3.1-3ubuntu1 gcc_4:5.2.1-16ubuntu2 gcc-5_5.3.1-3ubuntu1 gcc-5-base_5.3.1-3ubuntu1 gettext_0.19.4-1ubuntu3 gettext-base_0.19.4-1ubuntu3 gnupg_1.4.19-6ubuntu1 gpgv_1.4.19-6ubuntu1 grep_2.22-1 groff-base_1.22.3-4 gzip_1.6-4ubuntu1 hostname_3.16ubuntu2 init_1.24ubuntu2 initscripts_2.88dsf-59.2ubuntu3 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-2 libapparmor1_2.10-0ubuntu8 libapt-pkg4.16_1.0.10.2ubuntu1 libapt-pkg5.0_1.1.4 libarchive-zip-perl_1.53-1 libasan2_5.3.1-3ubuntu1 libasn1-8-heimdal_1.6~rc2+dfsg-10ubuntu1 libasprintf0v5_0.19.4-1ubuntu3 libatomic1_5.3.1-3ubuntu1 libattr1_1:2.4.47-2 libaudit-common_1:2.4.4-4ubuntu1 libaudit1_1:2.4.4-4ubuntu1 libblkid1_2.27.1-1ubuntu3 libboost-test-dev_1.58.0.0ubuntu1 libboost-test1.58-dev_1.58.0+dfsg-3.1ubuntu1 libboost-test1.58.0_1.58.0+dfsg-3.1ubuntu1 libboost1.58-dev_1.58.0+dfsg-3.1ubuntu1 libbz2-1.0_1.0.6-8 libbz2-dev_1.0.6-8 libc-bin_2.21-0ubuntu5 libc-dev-bin_2.21-0ubuntu5 libc6_2.21-0ubuntu5 libc6-dev_2.21-0ubuntu5 libcap2_1:2.24-12 libcap2-bin_1:2.24-12 libcc1-0_5.3.1-3ubuntu1 libcomerr2_1.42.13-1ubuntu1 libcroco3_0.6.9-1 libcryptsetup4_2:1.6.6-5ubuntu2 libcurl3-gnutls_7.45.0-1ubuntu1 libdb5.3_5.3.28-11 libdbus-1-3_1.10.6-1ubuntu1 libdebconfclient0_0.198ubuntu1 libdevmapper1.02.1_2:1.02.110-1ubuntu1 libdpkg-perl_1.18.3ubuntu1 libfakeroot_1.20.2-1ubuntu1 libfdisk1_2.27.1-1ubuntu3 libffi6_3.2.1-3 libfile-stripnondeterminism-perl_0.014-1 libgcc-5-dev_5.3.1-3ubuntu1 libgcc1_1:5.3.1-3ubuntu1 libgcrypt20_1.6.4-3 libgdbm3_1.8.3-13.1 libglib2.0-0_2.47.3-3 libgmp10_2:6.1.0+dfsg-2 libgnutls-deb0-28_3.3.18-1ubuntu1 libgomp1_5.3.1-3ubuntu1 libgpg-error0_1.20-1 libgssapi-krb5-2_1.13.2+dfsg-4 libgssapi3-heimdal_1.6~rc2+dfsg-10ubuntu1 libhcrypto4-heimdal_1.6~rc2+dfsg-10ubuntu1 libheimbase1-heimdal_1.6~rc2+dfsg-10ubuntu1 libheimntlm0-heimdal_1.6~rc2+dfsg-10ubuntu1 libhogweed4_3.1.1-4 libhx509-5-heimdal_1.6~rc2+dfsg-10ubuntu1 libicu55_55.1-6ubuntu1 libidn11_1.32-3ubuntu1 libisl13_0.14-2 libisl15_0.15-3 libitm1_5.3.1-3ubuntu1 libk5crypto3_1.13.2+dfsg-4 libkeyutils1_1.5.9-8ubuntu1 libkmod2_21-1ubuntu1 libkrb5-26-heimdal_1.6~rc2+dfsg-10ubuntu1 libkrb5-3_1.13.2+dfsg-4 libkrb5support0_1.13.2+dfsg-4 libldap-2.4-2_2.4.41+dfsg-1ubuntu2 liblockfile-bin_1.09-6ubuntu1 liblockfile1_1.09-6ubuntu1 liblzma5_5.1.1alpha+20120614-2ubuntu2 libmagic1_1:5.25-2ubuntu1 libmount1_2.27.1-1ubuntu3 libmpc3_1.0.3-1 libmpfr4_3.1.3-1 libncurses5_6.0+20151024-2ubuntu1 libncursesw5_6.0+20151024-2ubuntu1 libnettle6_3.1.1-4 libnih-dbus1_1.0.3-4ubuntu27 libnih1_1.0.3-4ubuntu27 libp11-kit0_0.23.1-3 libpam-modules_1.1.8-3.1ubuntu3 libpam-modules-bin_1.1.8-3.1ubuntu3 libpam-runtime_1.1.8-3.1ubuntu3 libpam0g_1.1.8-3.1ubuntu3 libpcre16-3_2:8.35-7.1ubuntu1 libpcre3_2:8.35-7.1ubuntu1 libpcre3-dev_2:8.35-7.1ubuntu1 libpcre32-3_2:8.35-7.1ubuntu1 libpcrecpp0v5_2:8.35-7.1ubuntu1 libpipeline1_1.4.1-1 libpng12-0_1.2.54-1 libprocps3_1:3.3.9-1ubuntu8 libprocps4_2:3.3.10-4ubuntu1 libreadline6_6.3-8ubuntu1 libroken18-heimdal_1.6~rc2+dfsg-10ubuntu1 librtmp1_2.4+20150115.gita107cef-1build1 libsasl2-2_2.1.26.dfsg1-14 libsasl2-modules-db_2.1.26.dfsg1-14 libseccomp2_2.2.3-2ubuntu1 libselinux1_2.4-3 libsemanage-common_2.4-3 libsemanage1_2.4-3 libsepol1_2.4-2 libslang2_2.3.0-2ubuntu1 libsmartcols1_2.27.1-1ubuntu3 libsqlite3-0_3.9.2-1 libss2_1.42.13-1ubuntu1 libssl1.0.0_1.0.2e-1ubuntu1 libstdc++-5-dev_5.3.1-3ubuntu1 libstdc++6_5.3.1-3ubuntu1 libsystemd0_228-2ubuntu2 libtasn1-6_4.7-2 libtimedate-perl_2.3000-2 libtinfo5_6.0+20151024-2ubuntu1 libubsan0_5.3.1-3ubuntu1 libudev1_228-2ubuntu2 libunistring0_0.9.3-5.2ubuntu1 libusb-0.1-4_2:0.1.12-27 libustr-1.0-1_1.0.4-5 libuuid1_2.27.1-1ubuntu3 libwind0-heimdal_1.6~rc2+dfsg-10ubuntu1 libxml2_2.9.2+zdfsg1-4ubuntu2 linux-libc-dev_4.3.0-3.12 lockfile-progs_0.1.17 login_1:4.1.5.1-1.1ubuntu7 lsb-base_9.20150917ubuntu1 make_4.0-8.2 man-db_2.7.5-1 mawk_1.3.3-17ubuntu2 mount_2.27.1-1ubuntu3 multiarch-support_2.21-0ubuntu5 ncurses-base_6.0+20151024-2ubuntu1 ncurses-bin_6.0+20151024-2ubuntu1 openssl_1.0.2e-1ubuntu1 optipng_0.7.5-1 passwd_1:4.1.5.1-1.1ubuntu7 patch_2.7.5-1 perl_5.20.2-6 perl-base_5.20.2-6 perl-modules_5.20.2-6 pkg-create-dbgsym_0.70 pkgbinarymangler_125 po-debconf_1.0.18 policyrcd-script-zg2_0.1-2 procps_2:3.3.10-4ubuntu1 quilt_0.63-3 readline-common_6.3-8ubuntu1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-ncbi-blast+-dummy_0.invalid.0 sed_4.2.2-6.1 sensible-utils_0.0.9 systemd_228-2ubuntu2 systemd-sysv_228-2ubuntu2 sysv-rc_2.88dsf-59.2ubuntu3 sysvinit-utils_2.88dsf-59.2ubuntu3 tar_1.28-2.1 time_1.7-25.1 tzdata_2015g-1 ubuntu-keyring_2012.05.19 udev_228-2ubuntu2 util-linux_2.27.1-1ubuntu3 xz-utils_5.1.1alpha+20120614-2ubuntu2 zlib1g_1:1.2.8.dfsg-2ubuntu4 zlib1g-dev_1:1.2.8.dfsg-2ubuntu4 ┌──────────────────────────────────────────────────────────────────────────────┐ │ Build │ └──────────────────────────────────────────────────────────────────────────────┘ Unpack source ───────────── gpgv: Signature made Thu Dec 10 15:36:31 2015 UTC using RSA key ID 326D8438 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./ncbi-blast+_2.2.31-1.dsc dpkg-source: info: extracting ncbi-blast+ in ncbi-blast+-2.2.31 dpkg-source: info: unpacking ncbi-blast+_2.2.31.orig.tar.gz dpkg-source: info: unpacking ncbi-blast+_2.2.31-1.debian.tar.xz dpkg-source: info: applying enable_clean_after_failed_compile dpkg-source: info: applying legacy_rename_rpsblast dpkg-source: info: applying fix_lib_deps dpkg-source: info: applying no_multiarch_rpath dpkg-source: info: applying use_pie_for_apps dpkg-source: info: applying skip_services_unit_test dpkg-source: info: applying fix_configure dpkg-source: info: applying fix_compilation dpkg-source: info: applying allow_gcc5 Check disc space ──────────────── Sufficient free space for build User Environment ──────────────── DEB_BUILD_OPTIONS=parallel=4 HOME=/home/buildd LANG=C LOGNAME=buildd MAIL=/var/mail/buildd OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games PWD=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31 SHELL=/bin/sh SUDO_COMMAND=/usr/sbin/chroot /«CHROOT» su buildd -s /bin/sh -c cd '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31' && 'env' SUDO_GID=2501 SUDO_UID=2001 SUDO_USER=buildd TERM=unknown USER=buildd USERNAME=root dpkg-buildpackage ───────────────── dpkg-buildpackage: source package ncbi-blast+ dpkg-buildpackage: source version 2.2.31-1 dpkg-buildpackage: source distribution unstable dpkg-source --before-build ncbi-blast+-2.2.31 dpkg-buildpackage: host architecture ppc64el fakeroot debian/rules clean dh clean -Dc++ --with autotools_dev --with quilt dh_testdir -O-Dc\+\+ dh_auto_clean -O-Dc\+\+ dh_autotools-dev_restoreconfig -O-Dc\+\+ dh_quilt_unpatch -O-Dc\+\+ Removing patch allow_gcc5 Restoring c++/src/build-system/configure Restoring c++/src/build-system/configure.ac Removing patch fix_compilation Restoring c++/src/util/regexp/pcretest.c Restoring c++/include/util/bitset/bmconst.h Removing patch fix_configure Restoring c++/configure.orig Removing patch skip_services_unit_test Restoring c++/src/objtools/blast/services/unit_test/Makefile.blast_services_unit_test.app Removing patch use_pie_for_apps Restoring c++/src/build-system/Makefile.app.in Removing patch no_multiarch_rpath Restoring c++/src/build-system/configure Restoring c++/src/build-system/configure.ac Removing patch fix_lib_deps Restoring c++/src/objmgr/util/Makefile.util.lib Restoring c++/src/objmgr/split/Makefile.id2_split.lib Restoring c++/src/corelib/Makefile.test_mt.lib Restoring c++/src/corelib/Makefile.test_boost.lib Restoring c++/src/objects/id2/Makefile.id2.lib Restoring c++/src/objects/id1/Makefile.id1.lib Restoring c++/src/objects/biblio/Makefile.biblio.lib Restoring c++/src/objects/general/Makefile.general.lib Restoring c++/src/objects/submit/Makefile.submit.lib Restoring c++/src/objects/seqcode/Makefile.seqcode.lib Restoring c++/src/objects/seqedit/Makefile.seqedit.lib Restoring c++/src/objects/medline/Makefile.medline.lib Restoring c++/src/objects/seqsplit/Makefile.seqsplit.lib Restoring c++/src/objects/pub/Makefile.pub.lib Restoring c++/src/objects/seq/Makefile.seq.lib Restoring c++/src/objects/blastxml/Makefile.blastxml.lib Restoring c++/src/objects/blastdb/Makefile.blastdb.lib Restoring c++/src/objects/blast/Makefile.xnetblastcli.lib Restoring c++/src/objects/blast/Makefile.blast.lib Restoring c++/src/objects/seqset/Makefile.seqset.lib Restoring c++/src/objects/genomecoll/Makefile.genome_collection.lib Restoring c++/src/objects/scoremat/Makefile.scoremat.lib Restoring c++/src/html/Makefile.html.lib Restoring c++/src/algo/winmask/Makefile.xalgowinmask.lib Restoring c++/src/algo/segmask/Makefile.xalgosegmask.lib Restoring c++/src/algo/dustmask/Makefile.xalgodustmask.lib Restoring c++/src/algo/blast/format/Makefile.xblastformat.lib Restoring c++/src/algo/blast/Makefile.blast_macros.mk Restoring c++/src/algo/blast/blastinput/Makefile.blastinput.lib Restoring c++/src/algo/blast/core/Makefile.blast.lib Restoring c++/src/algo/blast/api/Makefile.xblast.lib Restoring c++/src/algo/blast/dbindex/Makefile.xalgoblastdbindex.lib Restoring c++/src/algo/blast/dbindex/makeindex/Makefile.makeindex.app Restoring c++/src/connect/Makefile.xconnect.lib Restoring c++/src/util/compress/api/Makefile.compress.lib Restoring c++/src/util/sequtil/Makefile.sequtil.lib Restoring c++/src/util/xregexp/Makefile.xregexp.lib Restoring c++/src/util/Makefile.util.lib Restoring c++/src/build-system/library_relations.txt Restoring c++/src/objtools/data_loaders/genbank/Makefile.ncbi_xloader_genbank.lib Restoring c++/src/objtools/data_loaders/genbank/id2/Makefile.ncbi_xreader_id2.lib Restoring c++/src/objtools/data_loaders/genbank/cache/Makefile.ncbi_xreader_cache.lib Restoring c++/src/objtools/data_loaders/genbank/id1/Makefile.ncbi_xreader_id1.lib Restoring c++/src/objtools/data_loaders/genbank/Makefile.ncbi_xreader.lib Restoring c++/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb.lib Restoring c++/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb_rmt.lib Restoring c++/src/objtools/readers/Makefile.xobjread.lib Restoring c++/src/objtools/align_format/Makefile.align_format.lib Restoring c++/src/objtools/alnmgr/Makefile.alnmgr.lib Restoring c++/src/objtools/seqmasks_io/Makefile.seqmasks_io.lib Restoring c++/src/objtools/blast/seqdb_reader/Makefile.seqdb.lib Restoring c++/src/objtools/blast/seqdb_writer/Makefile.writedb.lib Restoring c++/src/objtools/blast/services/Makefile.blast_services.lib Restoring c++/src/objtools/blast/blastdb_format/Makefile.blastdb_format.lib Restoring c++/src/objtools/simple/Makefile.xobjsimple.lib Restoring c++/src/cgi/Makefile.cgi.lib Restoring c++/src/serial/Makefile.serial.lib Removing patch legacy_rename_rpsblast Restoring c++/src/app/blast/legacy_blast.pl Removing patch enable_clean_after_failed_compile Restoring c++/src/build-system/new_module.sh.in No patches applied debian/rules override_dh_clean make[1]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31' cp c++/configure.orig configure.orig.save dh_clean #Tricky - for each module directory there may be several module files #or there may be none but then there is still a module named after the #directory. Clean everything! for x in c++/src/objects/* ; do \ (cd "$x" && ( \ mods="`echo *.module`" ; \ [ "${mods#*\*}" = "$mods" ] || mods="`basename $x`" ; \ for mod in $mods ; do \ ../../../BUILD/build/new_module.sh $mod purge_sources ; \ done ) ; \ ) ; \ done /bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.in /bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.sources /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.cmd /bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.sh /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found /bin/sh: 6: ../../../BUILD/build/new_module.sh: not found make[1]: [override_dh_clean] Error 127 (ignored) debian/rules:83: recipe for target 'override_dh_clean' failed rm -rf c++/compilers/dll c++/config.log c++/Makefile rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module find -name check_exec.pid -delete rm -rf c++/BUILD mv configure.orig.save c++/configure.orig make[1]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31' debian/rules build-arch dh build-arch -Dc++ --with autotools_dev --with quilt dh_testdir -a -O-Dc\+\+ dh_autotools-dev_updateconfig -a -O-Dc\+\+ dh_quilt_patch -a -O-Dc\+\+ Applying patch enable_clean_after_failed_compile patching file c++/src/build-system/new_module.sh.in Applying patch legacy_rename_rpsblast patching file c++/src/app/blast/legacy_blast.pl Applying patch fix_lib_deps patching file c++/src/algo/blast/Makefile.blast_macros.mk patching file c++/src/algo/blast/api/Makefile.xblast.lib patching file c++/src/algo/blast/blastinput/Makefile.blastinput.lib patching file c++/src/algo/blast/core/Makefile.blast.lib patching file c++/src/algo/blast/dbindex/Makefile.xalgoblastdbindex.lib patching file c++/src/algo/blast/dbindex/makeindex/Makefile.makeindex.app patching file c++/src/algo/blast/format/Makefile.xblastformat.lib patching file c++/src/algo/dustmask/Makefile.xalgodustmask.lib patching file c++/src/algo/segmask/Makefile.xalgosegmask.lib patching file c++/src/algo/winmask/Makefile.xalgowinmask.lib patching file c++/src/build-system/library_relations.txt patching file c++/src/cgi/Makefile.cgi.lib patching file c++/src/connect/Makefile.xconnect.lib patching file c++/src/corelib/Makefile.test_boost.lib patching file c++/src/corelib/Makefile.test_mt.lib patching file c++/src/html/Makefile.html.lib patching file c++/src/objects/biblio/Makefile.biblio.lib patching file c++/src/objects/blast/Makefile.blast.lib patching file c++/src/objects/blast/Makefile.xnetblastcli.lib patching file c++/src/objects/blastdb/Makefile.blastdb.lib patching file c++/src/objects/blastxml/Makefile.blastxml.lib patching file c++/src/objects/general/Makefile.general.lib patching file c++/src/objects/genomecoll/Makefile.genome_collection.lib patching file c++/src/objects/id1/Makefile.id1.lib patching file c++/src/objects/id2/Makefile.id2.lib patching file c++/src/objects/medline/Makefile.medline.lib patching file c++/src/objects/pub/Makefile.pub.lib patching file c++/src/objects/scoremat/Makefile.scoremat.lib patching file c++/src/objects/seq/Makefile.seq.lib patching file c++/src/objects/seqcode/Makefile.seqcode.lib patching file c++/src/objects/seqedit/Makefile.seqedit.lib patching file c++/src/objects/seqset/Makefile.seqset.lib patching file c++/src/objects/seqsplit/Makefile.seqsplit.lib patching file c++/src/objects/submit/Makefile.submit.lib patching file c++/src/objmgr/split/Makefile.id2_split.lib patching file c++/src/objmgr/util/Makefile.util.lib patching file c++/src/objtools/align_format/Makefile.align_format.lib patching file c++/src/objtools/alnmgr/Makefile.alnmgr.lib patching file c++/src/objtools/blast/blastdb_format/Makefile.blastdb_format.lib patching file c++/src/objtools/blast/seqdb_reader/Makefile.seqdb.lib patching file c++/src/objtools/blast/seqdb_writer/Makefile.writedb.lib patching file c++/src/objtools/blast/services/Makefile.blast_services.lib patching file c++/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb.lib patching file c++/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb_rmt.lib patching file c++/src/objtools/data_loaders/genbank/Makefile.ncbi_xloader_genbank.lib patching file c++/src/objtools/data_loaders/genbank/Makefile.ncbi_xreader.lib patching file c++/src/objtools/data_loaders/genbank/cache/Makefile.ncbi_xreader_cache.lib patching file c++/src/objtools/data_loaders/genbank/id1/Makefile.ncbi_xreader_id1.lib patching file c++/src/objtools/data_loaders/genbank/id2/Makefile.ncbi_xreader_id2.lib patching file c++/src/objtools/readers/Makefile.xobjread.lib patching file c++/src/objtools/seqmasks_io/Makefile.seqmasks_io.lib patching file c++/src/objtools/simple/Makefile.xobjsimple.lib patching file c++/src/serial/Makefile.serial.lib patching file c++/src/util/Makefile.util.lib patching file c++/src/util/compress/api/Makefile.compress.lib patching file c++/src/util/sequtil/Makefile.sequtil.lib patching file c++/src/util/xregexp/Makefile.xregexp.lib Applying patch no_multiarch_rpath patching file c++/src/build-system/configure patching file c++/src/build-system/configure.ac Applying patch use_pie_for_apps patching file c++/src/build-system/Makefile.app.in Applying patch skip_services_unit_test patching file c++/src/objtools/blast/services/unit_test/Makefile.blast_services_unit_test.app Applying patch fix_configure patching file c++/configure.orig Applying patch fix_compilation patching file c++/src/util/regexp/pcretest.c patching file c++/include/util/bitset/bmconst.h Applying patch allow_gcc5 patching file c++/src/build-system/configure patching file c++/src/build-system/configure.ac Now at patch allow_gcc5 debian/rules override_dh_auto_configure make[1]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31' cd c++ && LD_LIBRARY_PATH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib${LD_LIBRARY_PATH+:$LD_LIBRARY_PATH} \ CONFIG_SHELL=/bin/bash ./configure --with-dll --with-mt --without-autodep --without-makefile-auto-update --with-flat-makefile --without-caution --without-dbapi --without-lzo --with-runpath=/usr/lib/ncbi-blast+ --with-build-root=BUILD --without-debug configure: loading site script ./src/build-system/config.site configure: creating cache config.cache checking build system type... powerpc64le-unknown-linux-gnu checking host system type... powerpc64le-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking for gcc... gcc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes adjusted C compiler: /usr/bin/gcc adjusted C++ compiler: /usr/bin/g++ checking whether /usr/bin/gcc has an option to export all symbols... -Wl,-export-dynamic checking whether /usr/bin/gcc supports -Wl,--{en,dis}able-new-dtags... yes checking whether _LIBCPP_VERSION is declared... no checking how to enable C++ '11 features in /usr/bin/g++ ... -std=gnu++11 checking how to enable C '11 or at least '99 features in /usr/bin/gcc ... -std=gnu11 -fgnu89-inline checking whether ln -s works... yes checking for ranlib... ranlib checking for ar... ar cr checking ranlib's effectiveness... neutral checking for strip... strip checking whether strip loses runtime type information... no checking for ccache... no checking for tail... /usr/bin/tail checking whether /usr/bin/tail accepts modern syntax (-n N)... yes checking for sed... /bin/sed checking for touch... /bin/touch checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking how to run /bin/grep -E quietly... /bin/grep -E -q checking for valgrind... no checking for ldd... /usr/bin/ldd checking whether /usr/bin/ldd accepts -r... yes checking how to run the C++ preprocessor... /usr/bin/g++ -std=gnu++11 -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for size_t... yes checking for size_t... (cached) yes checking size of size_t... 8 checking for amq... no checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports -Wl,--no-allow-shlib-undefined... yes checking how to run the C preprocessor... /usr/bin/gcc -std=gnu11 -fgnu89-inline -E checking whether cross-directory hard links work... yes checking iostream usability... yes checking iostream presence... yes checking for iostream... yes checking iostream.h usability... no checking iostream.h presence... no checking for iostream.h... no checking fstream usability... yes checking fstream presence... yes checking for fstream... yes checking fstream.h usability... no checking fstream.h presence... no checking for fstream.h... no checking strstream usability... yes checking strstream presence... yes checking for strstream... yes checking strstream.h usability... no checking strstream.h presence... no checking for strstream.h... no checking strstrea.h usability... no checking strstrea.h presence... no checking for strstrea.h... no checking for inttypes.h... (cached) yes checking limits usability... yes checking limits presence... yes checking for limits... yes checking for unistd.h... (cached) yes checking windows.h usability... no checking windows.h presence... no checking for windows.h... no checking for wstring... yes checking for socklen_t... yes checking atomic.h usability... no checking atomic.h presence... no checking for atomic.h... no checking dlfcn.h usability... yes checking dlfcn.h presence... yes checking for dlfcn.h... yes checking ieeefp.h usability... no checking ieeefp.h presence... no checking for ieeefp.h... no checking poll.h usability... yes checking poll.h presence... yes checking for poll.h... yes checking sys/epoll.h usability... yes checking sys/epoll.h presence... yes checking for sys/epoll.h... yes checking sys/mount.h usability... yes checking sys/mount.h presence... yes checking for sys/mount.h... yes checking sys/sockio.h usability... no checking sys/sockio.h presence... no checking for sys/sockio.h... no checking sys/statvfs.h usability... yes checking sys/statvfs.h presence... yes checking for sys/statvfs.h... yes checking sys/sysinfo.h usability... yes checking sys/sysinfo.h presence... yes checking for sys/sysinfo.h... yes checking sys/vfs.h usability... yes checking sys/vfs.h presence... yes checking for sys/vfs.h... yes checking x86intrin.h usability... no checking x86intrin.h presence... no checking for x86intrin.h... no checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking errno.h usability... yes checking errno.h presence... yes checking for errno.h... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking netinet/tcp.h usability... yes checking netinet/tcp.h presence... yes checking for netinet/tcp.h... yes checking paths.h usability... yes checking paths.h presence... yes checking for paths.h... yes checking signal.h usability... yes checking signal.h presence... yes checking for signal.h... yes checking sys/ioctl.h usability... yes checking sys/ioctl.h presence... yes checking for sys/ioctl.h... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking wchar.h usability... yes checking wchar.h presence... yes checking for wchar.h... yes checking whether time.h and sys/time.h may both be included... yes checking for gethostbyname_r... 6 checking for gethostbyaddr_r... 8 checking for getservbyname_r... 6 checking for getpwuid_r... 5 checking for getlogin_r... yes checking for localtime_r... yes checking for pthread_setconcurrency... yes checking for pthread_atfork... yes checking return type of localtime_r... struct checking whether pthread mutexes are available... yes checking for vprintf... yes checking for _doprnt... no checking for euidaccess... yes checking for atoll... yes checking for basename... yes checking for lchown... yes checking for fseeko... yes checking for getgrouplist... yes checking for getpagesize... yes checking for getpass... yes checking for getpassphrase... no checking for getpwuid... yes checking for getrusage... yes checking for gettimeofday... yes checking for getuid... yes checking for memrchr... yes checking for readpassphrase... no checking for readv... yes checking for usleep... yes checking for asprintf... yes checking for vasprintf... yes checking for vsnprintf... yes checking for select... yes checking for statfs... yes checking for statvfs... yes checking for strcasecmp... yes checking for strlcat... no checking for strlcpy... no checking for strdup... yes checking for strndup... yes checking for strtok_r... yes checking for sysmp... no checking for timegm... yes checking for utimes... yes checking for lutimes... yes checking for writev... yes checking return type of signal handlers... void checking whether select updates the timeout when interrupted... yes checking whether strcasecmp treats letters as lowercase... yes checking for Linux-like sysinfo with 1 arg... yes checking for getloadavg... yes checking for readdir_r... 3 checking for an ANSI C-conforming const... yes checking whether byte ordering is bigendian... no checking whether char is unsigned... yes checking for char... yes checking size of char... 1 checking for double... yes checking size of double... 8 checking for float... yes checking size of float... 4 checking for int... yes checking size of int... 4 checking for long... yes checking size of long... 8 checking for long double... yes checking size of long double... 16 checking for long long... yes checking size of long long... 8 checking for short... yes checking size of short... 2 checking for void*... yes checking size of void*... 8 checking for __int64... no checking size of __int64... 0 checking for intptr_t... yes checking for uintptr_t... yes checking for struct sockaddr_in.sin_len... no checking for struct tm.tm_zone... yes checking for struct tm.__tm_zone... no checking whether function prototypes can use throw(...)... yes checking for obsolete string::compare() syntax... no checking whether the auto_ptr template class works... yes checking for min/max templates... yes checking whether new C++ streams have ios_base::... yes checking for ios(_base)::register_callback... yes checking for std::char_traits::... yes checking for SysV semaphores... yes checking for union semun... no checking which way the stack grows... down checking whether the preprocessor supports C99-style variadic macros... yes checking whether the preprocessor supports GNU-style variadic macros... yes checking syntax for marking deprecated functions... __attribute__((__deprecated__)) checking how to force inlining... inline __attribute__((always_inline)) checking whether the C compiler supports __attribute__((destructor))... yes checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports __attribute__((visibility("default")))... (cached) unnecessary checking whether the C compiler supports C99 restrict... __restrict__ checking whether the C++ compiler supports C99 restrict... __restrict__ checking syntax for marking functions that never return... __attribute__((__noreturn__)) checking syntax for declaring thread-local variables... __thread checking whether FIONBIO requires BSD_COMP to be defined... no checking whether INADDR_NONE is defined... yes checking whether unaligned reads are permissible... yes checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports SIMD vector arithmetic... no checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports -funsafe-math-optimizations... yes checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports -msse4.1... no checking whether /usr/bin/gcc -std=gnu11 -fgnu89-inline supports -maes... no checking whether in-house NCBI resources are available... no checking for gethostbyname in -lnsl... yes checking for connect in -lsocket... no checking for res_search in -lresolv... yes checking for inet_ntoa_r... no checking for getaddrinfo... yes checking for getnameinfo... yes checking for freehostent... no checking for gethostent_r... yes checking for getipnodebyaddr... no checking for getipnodebyname... no checking for inet_ntop... yes checking for erf... yes checking for library containing kstat_open... no checking for library containing rstat... no checking for library containing setkey... -lcrypt checking for library containing dlopen... -ldl checking for library containing uuid_generate... no checking for library containing fuse_loop... no checking for library containing clock_gettime... none required checking for library containing cplus_demangle... no checking for nanosleep... yes checking for sched_yield... yes checking for library containing iconv... none required checking for iconv declaration... extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking for libz... yes checking for libbz2... yes checking for libpcre... yes checking for libgcrypt-config... no checking for libgcrypt... no checking for libgnutls-config... no checking for libgnutls... no checking for libssl... no checking for krb5-config... no checking for libgssapi_krb5... no checking for libcurl... no checking for reentrant Sybase libraries... no checking for Sybase... no checking for FreeTDS... no checking for mysql_config... no checking for Berkeley DB libraries... no checking for python... no checking for python2.3... no checking for python2.4... no checking for python2.5... no checking for perl... /usr/bin/perl checking for usable Perl libraries... no basename: missing operand Try 'basename --help' for more information. checking Boost version... checking for Boost library name tag... -gcc53-mt--64 (autodetected) checking for Boost.Regex... no checking for Boost.Spirit... yes checking for Boost.System... no checking for Boost.Filesystem... no checking for Boost.Iostreams... no checking for Boost.Program-Options... no checking for Boost.Test... included-only checking for Boost.Threads... no checking for the NCBI C toolkit... no checking for X... no checking for XextCreateExtension in -lXext... no checking for XtMainLoop in -lXt... no checking for XmuMakeAtom in -lXmu... no checking for OpenGL... no checking for wx-config... no checking for wxWidgets... no checking for FastCGI libraries... no checking for FCGX_Accept_r... no checking for NCBI SSS directories in /sss/BUILD... no checking for SP directories... no checking for ORBacus... no checking for ICU... no checking for libexpat... no checking for libsablot... no checking for libxml2... no checking for libxslt... no checking for xsltproc... : checking for libexslt... no checking for Xerces-C++... no checking for Xalan-C++... no checking for Zorba... no checking for libsqlite3... no checking for liboechem... no checking for libdrmaa... no checking for libmuparser... no checking for libhdf5_cpp... no checking for libjpeg... no checking for libpng... no checking for libtiff... no checking for libungif... no checking for libgif... no checking for libXpm... no checking for freetype-config... no checking for libftgl... no checking for libmagic... no checking for libmimetic... no checking for soapcpp2... no checking for wsdl2h... no checking for libgsoapssl++... no checking for libavrocpp... no checking for libmongoclient... no configure: looking for configurables below /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++... configure: ...done configure: updating cache config.cache configure: creating /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/config.status config.status: creating /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/dustmasker/Makefile config.status: creating /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb/Makefile config.status: creating /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/winmasker/Makefile 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/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/Makefile config.status: creating /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/cgi/Makefile config.status: creating /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial/datatool/Makefile config.status: creating /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial/Makefile config.status: creating /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile config.status: creating /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/./Makefile config.status: creating /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc/ncbiconf_unix.h config.status: executing default commands /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib/ncbicfg.c is updated Platform not defined for Linux ppc64le -- please fix me project_tree_builder is not found at /net/snowman/vol/export2/win-coremake/App/Ncbi/cppcore/ptb/UNKNOWN/3.11.3/project_tree_builder Will build project_tree_builder locally ********************************************************************** Building project_tree_builder ********************************************************************** make[2]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' make[3]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' /usr/bin/make[3] (Makefile.precompile): Nothing to be done for `all'. make[3]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' /usr/bin/make[2] (Makefile.corelib.lib): Nothing to be done for `export-headers'. /usr/bin/make[2] (Makefile.test_mt.lib): Nothing to be done for `export-headers'. /usr/bin/make[2] (Makefile.test_boost.lib): Nothing to be done for `export-headers'. /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib TMPL=corelib -w all make[3]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbi_os_unix.cpp -o ncbi_os_unix.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include 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/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/env_reg.cpp -o env_reg.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/metareg.cpp -o metareg.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbi_config.cpp -o ncbi_config.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbi_param.cpp -o ncbi_param.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbi_process.cpp -o ncbi_process.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbi_safe_static.cpp -o ncbi_safe_static.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbi_signal.cpp -o ncbi_signal.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbi_stack.cpp -o ncbi_stack.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbi_system.cpp -o ncbi_system.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbiapp.cpp -o ncbiapp.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbiargs.cpp -o ncbiargs.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbiatomic.cpp -o ncbiatomic.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include ncbicfg.c -o ncbicfg.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidbg.cpp -o ncbidbg.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp -o ncbidiag.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp: In static member function 'static void ncbi::CDiagContext::sx_ThreadDataTlsCleanup(ncbi::CDiagContextThreadData*, void*)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp:822:67: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations] value->GetProperties(CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:1790:34: note: declared here NCBI_DEPRECATED TProperties* GetProperties(EGetProperties flag); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::SetProperty(const string&, const string&, ncbi::CDiagContext::EPropertyMode)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp:1743:49: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations] CDiagContextThreadData::eProp_Create); /* NCBI_FAKE_WARNING */ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp:924:1: note: declared here CDiagContextThreadData::GetProperties(EGetProperties flag) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp: In member function 'std::__cxx11::string ncbi::CDiagContext::GetProperty(const string&, ncbi::CDiagContext::EPropertyMode) const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp:1806:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations] CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp:924:1: note: declared here CDiagContextThreadData::GetProperties(EGetProperties flag) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::DeleteProperty(const string&, ncbi::CDiagContext::EPropertyMode)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp:1831:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations] CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp:924:1: note: declared here CDiagContextThreadData::GetProperties(EGetProperties flag) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp: In member function 'void ncbi::CDiagContext::PrintProperties()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp:1863:46: warning: 'ncbi::CDiagContextThreadData::TProperties* ncbi::CDiagContextThreadData::GetProperties(ncbi::CDiagContextThreadData::EGetProperties)' is deprecated [-Wdeprecated-declarations] CDiagContextThreadData::eProp_Get); /* NCBI_FAKE_WARNING */ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp:924:1: note: declared here CDiagContextThreadData::GetProperties(EGetProperties flag) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp: In static member function 'static void ncbi::CDiagContext::SetupDiag(ncbi::EAppDiagStream, ncbi::CNcbiRegistry*, ncbi::EDiagCollectMessages, const char*)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp:3025:44: warning: 'virtual bool ncbi::CNcbiApplication::SetupDiag_AppSpecific()' is deprecated [-Wdeprecated-declarations] app->SetupDiag_AppSpecific(); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbifile.hpp:48, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:354:34: note: declared here NCBI_DEPRECATED virtual bool SetupDiag_AppSpecific(void); ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidiag_p.cpp -o ncbidiag_p.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbidll.cpp -o ncbidll.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbienv.cpp -o ncbienv.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbiexec.cpp -o ncbiexec.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbiexpt.cpp -o ncbiexpt.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbifile.cpp -o ncbifile.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbimempool.cpp -o ncbimempool.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbimtx.cpp -o ncbimtx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbiobj.cpp -o ncbiobj.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbireg.cpp -o ncbireg.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbistr.cpp -o ncbistr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbistre.cpp -o ncbistre.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbithr.cpp -o ncbithr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbitime.cpp -o ncbitime.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/obj_store.cpp -o obj_store.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/plugin_manager.cpp -o plugin_manager.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/plugin_manager_store.cpp -o plugin_manager_store.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/rwstreambuf.cpp -o rwstreambuf.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE 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-I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/version.cpp -o version.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/request_ctx.cpp -o request_ctx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE 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-I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbi_strings.c -o ncbi_strings.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/resource_info.cpp -o resource_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/interprocess_lock.cpp -o interprocess_lock.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbi_autoinit.cpp -o ncbi_autoinit.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/perf_log.cpp -o perf_log.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbi_toolkit.cpp -o ncbi_toolkit.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbierror.cpp -o ncbierror.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbi_url.cpp -o ncbi_url.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/ncbi_cookies.cpp -o ncbi_cookies.o /bin/rm -f libxncbi.so .libxncbi.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxncbi.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC ncbi_os_unix.o blob_storage.o ddumpable.o env_reg.o metareg.o ncbi_config.o ncbi_param.o ncbi_process.o ncbi_safe_static.o ncbi_signal.o ncbi_stack.o ncbi_system.o ncbiapp.o ncbiargs.o ncbiatomic.o ncbicfg.o ncbidbg.o ncbidiag.o ncbidiag_p.o ncbidll.o ncbienv.o ncbiexec.o ncbiexpt.o ncbifile.o ncbimempool.o ncbimtx.o ncbiobj.o ncbireg.o ncbistr.o ncbistre.o ncbithr.o ncbitime.o obj_store.o plugin_manager.o plugin_manager_store.o rwstreambuf.o stream_utils.o syslog.o version.o request_ctx.o request_control.o expr.o ncbi_strings.o resource_info.o interprocess_lock.o ncbi_autoinit.o perf_log.o ncbi_toolkit.o ncbierror.o ncbi_url.o ncbi_cookies.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxncbi.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxncbi.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxncbi.so /bin/ln -f .xncbi.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xncbi.dep make[3]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib TMPL=test_mt -w all make[3]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/test_mt.cpp -o test_mt.o /bin/rm -f libtest_mt.so .libtest_mt.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libtest_mt.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC test_mt.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_mt.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libtest_mt.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libtest_mt.so /bin/ln -f .test_mt.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.test_mt.dep make[3]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib TMPL=test_boost -w all make[3]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/test_boost.cpp -o test_boost.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/corelib/teamcity_messages.cpp -o teamcity_messages.o /bin/rm -f libtest_boost.so .libtest_boost.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libtest_boost.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC test_boost.o teamcity_messages.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_boost.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libtest_boost.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libtest_boost.so /bin/ln -f .test_boost.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.test_boost.dep make[3]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' make[2]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' make[2]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util' /usr/bin/make[2] (Makefile.util.lib): Nothing to be done for `export-headers'. /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util TMPL=util -w all make[3]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/random_gen.cpp -o random_gen.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE 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/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/table_printer.cpp -o table_printer.o /bin/rm -f libxutil.so .libxutil.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxutil.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC random_gen.o utf8.o checksum.o bytesrc.o strbuffer.o itree.o smalldns.o thread_pool_old.o ddump_viewer.o strsearch.o logrotate.o format_guess.o ascii85.o md5.o file_obsolete.o unicode.o dictionary.o dictionary_util.o thread_nonstop.o sgml_entity.o static_set.o transmissionrw.o miscmath.o mutex_pool.o ncbi_cache.o line_reader.o util_exception.o uttp.o multi_writer.o itransaction.o thread_pool.o thread_pool_ctrl.o scheduler.o distribution.o rangelist.o util_misc.o histogram_binning.o table_printer.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxutil.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxutil.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxutil.so /bin/ln -f .xutil.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xutil.dep make[3]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util' make[2]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util' make[2]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/regexp' NOTE: Skipping project regexp due to unmet requirements: LocalPCRE make[3]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/regexp' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/regexp TMPL=regexp -w mark-as-disabled make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/regexp' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/regexp' make[3]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/regexp' make[2]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/regexp' make[2]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/xregexp' /usr/bin/make[2] (Makefile.xregexp.lib): Nothing to be done for `export-headers'. /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/xregexp TMPL=xregexp -w all make[3]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/xregexp' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/xregexp/regexp.cpp -o regexp.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/xregexp/arg_regexp.cpp -o arg_regexp.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/xregexp/mask_regexp.cpp -o mask_regexp.o /bin/rm -f libxregexp.so .libxregexp.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxregexp.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC regexp.o arg_regexp.o mask_regexp.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxncbi -lpcre /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxregexp.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxregexp.so /bin/ln -f .xregexp.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xregexp.dep make[3]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/xregexp' make[2]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/xregexp' make[2]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/build-system/project_tree_builder' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder TMPL=project_tree_builder -w all make[3]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/build-system/project_tree_builder' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/file_contents.cpp -o file_contents.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/msvc_configure.cpp -o msvc_configure.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/msvc_makefile.cpp -o msvc_makefile.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/msvc_masterproject_generator.cpp -o msvc_masterproject_generator.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/msvc_prj_generator.cpp -o msvc_prj_generator.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/msvc_prj_utils.cpp -o msvc_prj_utils.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/msvc_project_context.cpp -o msvc_project_context.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/msvc_site.cpp -o msvc_site.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/msvc_sln_generator.cpp -o msvc_sln_generator.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/proj_builder_app.cpp -o proj_builder_app.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/proj_datatool_generated_src.cpp -o proj_datatool_generated_src.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/proj_item.cpp -o proj_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/proj_tree.cpp -o proj_tree.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/proj_tree_builder.cpp -o proj_tree_builder.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/proj_src_resolver.cpp -o proj_src_resolver.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/proj_utils.cpp -o proj_utils.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/resolver.cpp -o resolver.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/msvc_configure_prj_generator.cpp -o msvc_configure_prj_generator.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/proj_projects.cpp -o proj_projects.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/msvc_dlls_info.cpp -o msvc_dlls_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/msvc_prj_files_collector.cpp -o msvc_prj_files_collector.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/configurable_file.cpp -o configurable_file.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/ptb_gui.cpp -o ptb_gui.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/ptb_registry.cpp -o ptb_registry.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/mac_prj_generator.cpp -o mac_prj_generator.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/prj_file_collector.cpp -o prj_file_collector.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie file_contents.o msvc_configure.o msvc_makefile.o msvc_masterproject_generator.o msvc_prj_generator.o msvc_prj_utils.o msvc_project_context.o msvc_site.o msvc_sln_generator.o proj_builder_app.o proj_datatool_generated_src.o proj_item.o proj_tree.o proj_tree_builder.o proj_src_resolver.o proj_utils.o resolver.o msvc_configure_prj_generator.o proj_projects.o msvc_dlls_info.o msvc_prj_files_collector.o configurable_file.o ptb_gui.o ptb_registry.o mac_prj_generator.o prj_file_collector.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxutil -lxncbi -lxregexp -lpcre -ldl -lm -lpthread -o project_tree_builder strip project_tree_builder /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f project_tree_builder /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f project_tree_builder /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/project_tree_builder make[3]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/build-system/project_tree_builder' make[2]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/build-system/project_tree_builder' ********************************************************************** Running project_tree_builder. Please wait. ********************************************************************** ./build-system/project_tree_builder/project_tree_builder -dll -dtdep -conffile /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder.ini -logfile Flat.configuration_log /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ src Makefile.flat Done =============================================================================== NCBI C++ Toolkit documentation: Online: http://www.ncbi.nlm.nih.gov/toolkit/doc/book/ Local: ./doc/public/index.html For the available configuration flags run: ./configure --help CFLAGS = -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC CXXFLAGS = -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC CPPFLAGS = -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE LDFLAGS = -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O LIBRARIES: build as dynamic by default FEATURES: GCC MT LFS DLL DLL_BUILD unix WinMain Linux PACKAGES: enabled: Z BZ2 PCRE Boost.Spirit Boost.Test.Included disabled: UUID FUSE LocalZ LocalBZ2 LZO LocalPCRE GCRYPT GNUTLS OPENSSL KRB5 CURL Sybase DBLib FreeTDS MySQL BerkeleyDB BerkeleyDB++ ODBC PYTHON PYTHON23 PYTHON24 PYTHON25 PERL Boost.Filesystem Boost.Iostreams Boost.Program-Options Boost.Regex Boost.System Boost.Test Boost.Threads C-Toolkit OpenGL MESA GLUT GLEW wxWidgets wx2.8 Fast-CGI LocalSSS LocalMSGMAIL2 SSSUTILS LocalNCBILS NCBILS2 SSSDB SP ORBacus ICU EXPAT SABLOT LIBXML LIBXSLT LIBEXSLT Xerces Xalan Zorba SQLITE3 SQLITE3ASYNC OECHEM SGE MUPARSER HDF5 JPEG PNG TIFF UNGIF GIF XPM FreeType FTGL MAGIC MIMETIC GSOAP AVRO MONGODB PROJECTS: enabled: cgi serial objects app algo disabled: local_lbsm connext ncbi_crypt bdb dbapi ctools gui gbench Tools / flags / paths: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.mk Configuration header: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc/ncbiconf_unix.h To build everything: cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build && make all_r or simply run make in the current directory Alternatively, cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build && make -f Makefile.flat ******* CONFIGURATION SUCCESSFUL ******* make[1]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31' debian/rules override_dh_auto_build make[1]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31' cd c++/BUILD/build && \ make -j4 -f Makefile.flat all_projects="algo/blast/ app/ objmgr/ objtools/align_format/ objtools/blast/" make[2]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build' /usr/bin/make -w -j --jobserver-fds=3,4 -f Makefile.flat ptb_all.real MTARGET= make[3]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build' cd corelib/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources cd util/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources cd serial/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources cd serial/datatool/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial/datatool' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial/datatool' cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util' /usr/bin/make[4] (Makefile.serial.lib): Nothing to be done for `export-headers'. cd util/tables/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/composition_adjustment' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/tables' /usr/bin/make[4] (Makefile.cserial.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' /usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/composition_adjustment' cd connect/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/tables' cd algo/blast/core/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/connect' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/core' /usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'. /usr/bin/make[4] (Makefile.connect.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/core' cd util/sequtil/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' cd util/creaders/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/sequtil' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/creaders' /usr/bin/make[4] (Makefile.connssl.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.sequtil.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/sequtil' cd objmgr/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.creaders.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/creaders' cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.xxconnect.lib): Nothing to be done for `export-headers'. make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader' /usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.objmgr.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr' cd objtools/readers/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.seqdb.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader' cd objmgr/util/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/readers' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr/util' /usr/bin/make[4] (Makefile.xthrserv.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.xobjread.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr/util' cd objtools/seqmasks_io/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' cd algo/blast/dbindex/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/seqmasks_io' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/dbindex' /usr/bin/make[4] (Makefile.xobjreadex.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.seqmasks_io.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/seqmasks_io' cd algo/dustmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.xalgoblastdbindex.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/dbindex' cd algo/winmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/dustmask' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/winmask' /usr/bin/make[4] (Makefile.xalgodustmask.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/dustmask' cd algo/blast/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/readers' cd objtools/blast/services/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.xalgowinmask.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/winmask' cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/api' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/services' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader' /usr/bin/make[4] (Makefile.blast_services.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/services' cd util/compress/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.gene_info.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.xblast.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/api' cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/api' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/cache' /usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/api' cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/connect' cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.ncbi_xreader_cache.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.ncbi_xreader.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/cache' cd objtools/alnmgr/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/alnmgr' /usr/bin/make[4] (Makefile.ncbi_xloader_genbank.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.ncbi_xreader_id1.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/id1' cd cgi/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.ncbi_xreader_id2.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/id2' cd html/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/cgi' /usr/bin/make[4] (Makefile.alnmgr.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/alnmgr' cd objtools/align_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/html' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/align_format' /usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/html' cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.align_format.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/align_format' cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.fcgi.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank' cd algo/blast/blastinput/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/blastdb_format' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/blastinput' /usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.blastdb_format.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/blastdb_format' cd algo/blast/format/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/blastinput' cd util/xregexp/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/format' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/xregexp' /usr/bin/make[4] (Makefile.ncbi_xloader_blastdb_rmt.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.xblastformat.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/format' cd objtools/cleanup/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/xregexp' cd objtools/format/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/cleanup' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/format' /usr/bin/make[4] (Makefile.cleanup.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/cleanup' cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/cgi' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/blastdb' cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/blastinput/unit_test' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/blastinput/unit_test' cd algo/blast/igblast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.xformat.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/format' cd objtools/simple/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/dbindex/makeindex' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/dbindex/makeindex' cd connect/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=connect UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/igblast' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/simple' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/connect' /usr/bin/make[4] (Makefile.igblast.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/igblast' cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.blast_unit_test_util.lib): Nothing to be done for `export-headers'. make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/blast_format' cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.xobjsimple.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/simple' cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/blastdb' cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.seqalign_util.lib): Nothing to be done for `export-headers'. make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect TMPL=connect -w -j --jobserver-fds=3,4 all /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/run_with_lock.sh: adjusting base from make_connect to make__connect_common per /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/.#lock-map. make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/connect' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_lbsmd_stub.c -o ncbi_lbsmd_stub.o /usr/bin/make[4] (Makefile.writedb.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_writer' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ansi_ext.c -o ncbi_ansi_ext.o /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/Makefile.legacy_blast builddir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast -w -j --jobserver-fds=3,4 all make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/legacy_blast.pl /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o /bin/ln -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/legacy_blast.pl /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/legacy_blast.pl make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/Makefile.update_blastdb builddir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast -w -j --jobserver-fds=3,4 all /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_types.c -o ncbi_types.o make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/update_blastdb.pl /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/update_blastdb.pl /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/update_blastdb.pl make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.c -o ncbi_priv.o make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/make[4] (Makefile.blast_app_util.lib): Nothing to be done for `export-headers'. /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_core.c -o ncbi_core.o cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_util.c -o ncbi_util.o make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' cd app/dustmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/dustmasker' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/dustmasker' cd algo/segmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/segmask' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' cd app/segmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:56:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_util.c:34: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_util.c: In function 'CORE_SetLOGFILE_NAME_Ex': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:152:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_util.c:139:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' CORE_LOGF_ERRNO_X(1, eLOG_Error, errno, ^ make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/segmasker' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/segmasker' cd app/winmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/segmask' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c -o ncbi_socket.o make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/winmasker' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/winmasker' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker -w -j --jobserver-fds=3,4 all make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/winmasker' /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:56:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:77: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_DoLog': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:494:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(112, level, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:232:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:184:5: note: in expansion of macro 'DO_CORE_LOG_DATA' DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:534:13: note: in expansion of macro 'CORE_DATAF_X' CORE_DATAF_X(109, level, data, size, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:567:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(113, level, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:575:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(1, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_InitAPI_': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:140:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(0, 0, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:852:17: note: in expansion of macro 'CORE_LOG' CORE_LOG(eLOG_Critical, "Secure socket layer (SSL) has not" ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_gethostname': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:164:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:997:13: note: in expansion of macro 'CORE_LOG_ERRNO_EXX' CORE_LOG_ERRNO_EXX(103, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:132:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:1006:13: note: in expansion of macro 'CORE_LOG_X' CORE_LOG_X(104, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname_': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:1128:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(106, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_getlocalhostaddress': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:1165:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(9, reget == eDefault ? eLOG_Warning : eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:1191:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(155, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr_': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:1321:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(108, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:1356:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(10, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'x_TryLowerSockFileno': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:1465:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(111, eLOG_Trace, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_Select_': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:152:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:1590:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X' CORE_LOGF_ERRNO_X(145, eLOG_Error, errno, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:1719:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(5, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_Poll_': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:152:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:1863:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' CORE_LOGF_ERRNO_X(146, eLOG_Critical, errno, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:2008:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(147, ready ? eLOG_Warning : eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_IsConnected_': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:2589:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(6, eLOG_Trace, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_Recv': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:2770:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(7, eLOG_Trace, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_Read_': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:152:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:2924:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' CORE_LOGF_ERRNO_X(8, eLOG_Error, errno, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_Send': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:3277:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(11, eLOG_Trace, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_WritePending': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:3424:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(12, sock->log != eOff ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_Shutdown': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:3596:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(13, !tv || (tv->tv_sec | tv->tv_usec) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:3631:25: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(127, eLOG_Trace, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:3695:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(16, eLOG_Trace, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_Close_': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:3758:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(17, eLOG_Trace, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:3774:21: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(18, eLOG_Trace, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:3802:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(19, eLOG_Trace, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:3862:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(21, abort == 1 ? eLOG_Warning : eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_Connect_': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:3962:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(131, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:3979:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(142, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:3998:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(22, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4024:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(23, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4068:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(24, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4083:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(151, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4094:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(135, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4114:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(129, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4155:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(25, sock->log != eOff ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4199:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(26, sock->log != eOff ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_Create': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:152:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4291:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' CORE_LOGF_ERRNO_X(27, eLOG_Error, errno, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_CreateOnTop': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4344:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(47, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4367:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(148, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4405:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(48, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4446:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(50, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:152:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4460:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' CORE_LOGF_ERRNO_X(49, eLOG_Error, errno, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4523:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(132, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4544:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(153, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4555:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(138, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4575:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(124, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4590:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(43, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_CreateListening': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4642:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(144, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4676:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(34, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4722:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(35, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4778:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(36, error != SOCK_EADDRINUSE ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4799:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(150, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4850:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(38, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4869:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(37, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4920:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(110, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4934:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(115, eLOG_Note, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_Accept': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:4981:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(39, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5037:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(40, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5096:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(41, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5155:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(42, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5166:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(152, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5177:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(137, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5197:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(128, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_CloseListening': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5242:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(44, eLOG_Note, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5271:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(45, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_RecvMsg': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5359:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(20, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5407:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(94, eLOG_Trace, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 's_SendMsg': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:152:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5442:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' CORE_LOGF_ERRNO_X(154, eLOG_Error, errno, ^ /bin/ln -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/windowmasker_2.2.22_adapter.py /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5458:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(88, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5467:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(89, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5517:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(90, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5563:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(91, eLOG_Trace, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Create': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:152:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5606:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' CORE_LOGF_ERRNO_X(28, eLOG_Error, errno, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:152:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5616:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' CORE_LOGF_ERRNO_X(143, eLOG_Warning, errno, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:152:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5628:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' CORE_LOGF_ERRNO_X(29, eLOG_Error, errno, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:152:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5638:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' CORE_LOGF_ERRNO_X(30, eLOG_Warning, errno, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5657:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(116, eLOG_Note, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Close': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5719:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(117, eLOG_Note, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'LSOCK_GetOSHandleEx': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:5930:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(46, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'SOCK_Reconnect': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6118:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(52, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6128:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(53, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6140:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(51, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'SOCK_Shutdown': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6170:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(54, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6177:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(55, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6185:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(15, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'SOCK_Wait': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6314:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(56, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6342:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(57, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6356:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(58, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6370:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(59, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6379:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(60, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6389:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(61, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6399:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(62, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetTimeout': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6492:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(63, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetTimeout': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6533:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(64, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'SOCK_Read': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6575:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(65, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6585:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(66, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'SOCK_ReadLine': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6616:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(125, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'SOCK_PushBack': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6693:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(67, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'SOCK_Write': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6745:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(68, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6772:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(69, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6782:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(70, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'SOCK_Abort': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6801:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(71, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6808:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(72, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetOSHandleEx': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:6959:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(73, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetCork': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7022:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(158, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7029:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(159, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7042:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(160, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'SOCK_DisableOSSendDelay': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7059:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(156, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7066:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(157, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7079:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(75, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'DSOCK_CreateEx': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7120:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(76, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7159:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(77, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7209:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(130, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Bind': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7239:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(79, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7246:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(78, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7264:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(80, error != SOCK_EADDRINUSE ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7280:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(114, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Connect': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7309:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(82, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7316:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(81, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7335:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(83, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7348:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(84, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7377:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(85, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WaitMsg': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7405:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(96, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7412:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(95, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'DSOCK_RecvMsg': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7451:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(93, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7458:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(92, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SendMsg': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7495:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(87, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7502:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(86, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WipeMsg': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7534:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(98, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7541:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(97, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7561:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(99, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SetBroadcast': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7579:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(101, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7586:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(100, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7606:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(102, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetReuseAddress': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:168:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket.c:7768:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' CORE_LOGF_ERRNO_EXX(74, eLOG_Warning, ^ make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/winmasker' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/winmasker' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/winmasker' cd objmgr/split/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr/split' /usr/bin/make[4] (Makefile.id2_split.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr/split' cd objtools/align_format/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/align_format/unit_test' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/align_format/unit_test' cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:56:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connutil.c:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_Log': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:114:54: note: in expansion of macro 'CORE_CURRENT_FUNCTION' LOG_Write(lg, code, subcode, level, THIS_MODULE, CORE_CURRENT_FUNCTION, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connutil.c:1280:9: note: in expansion of macro 'LOG_WRITE' LOG_WRITE(lg, NCBI_C_ERRCODE_X, 11, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connutil.c: In function 'URL_ConnectEx': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:132:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connutil.c:1499:9: note: in expansion of macro 'CORE_LOG_X' CORE_LOG_X(2, eLOG_Critical, "[URL_Connect] Bad argument(s)"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:144:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(0, 0, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connutil.c:1512:9: note: in expansion of macro 'CORE_LOGF' CORE_LOGF(eLOG_Critical, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connutil.c:1527:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(3, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connutil.c:1555:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(4, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:152:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connutil.c:1622:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' CORE_LOGF_ERRNO_X(5, eLOG_Error, x_errno, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:152:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connutil.c:1635:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' CORE_LOGF_ERRNO_X(6, eLOG_Error, x_errno, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connutil.c:1673:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(7, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connutil.c: In function 'URL_Connect': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:152:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connutil.c:1712:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' CORE_LOGF_ERRNO_X(8, eLOG_Error, errno, ^ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c -o ncbi_connection.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:56:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:34: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'x_ReInit': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX' #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:239:13: note: in expansion of macro 'CONN_LOG' CONN_LOG(4, ReInit, eLOG_Critical, "Partial re-init not allowed"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX' #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:268:21: note: in expansion of macro 'CONN_LOG' CONN_LOG(3, Close, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX' #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:272:21: note: in expansion of macro 'CONN_LOG' CONN_LOG(3, ReInit, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 's_Open': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX' #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:342:9: note: in expansion of macro 'CONN_LOG' CONN_LOG(5, Open, eLOG_Error, "Failed to open connection"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_CreateEx': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX' #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:383:9: note: in expansion of macro 'CONN_LOG' CONN_LOG(2, Create, eLOG_Error, "NULL connector"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_ReInit': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:404:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(1, ReInit); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:404:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(1, ReInit); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_GetType': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:412:5: note: in expansion of macro 'CONN_NOT_NULL_EX' CONN_NOT_NULL_EX(6, GetType, 0); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:412:5: note: in expansion of macro 'CONN_NOT_NULL_EX' CONN_NOT_NULL_EX(6, GetType, 0); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_Description': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:421:5: note: in expansion of macro 'CONN_NOT_NULL_EX' CONN_NOT_NULL_EX(7, Description, 0); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:421:5: note: in expansion of macro 'CONN_NOT_NULL_EX' CONN_NOT_NULL_EX(7, Description, 0); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_GetPosition': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:433:5: note: in expansion of macro 'CONN_NOT_NULL_EX' CONN_NOT_NULL_EX(30, GetPosition, 0); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:433:5: note: in expansion of macro 'CONN_NOT_NULL_EX' CONN_NOT_NULL_EX(30, GetPosition, 0); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:446:9: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(31, GetPosition, eLOG_Error, errbuf, 0); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_SetTimeout': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:462:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(8, SetTimeout); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:462:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(8, SetTimeout); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:502:9: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(9, SetTimeout, eLOG_Error, errbuf, eIO_InvalidArg); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_GetTimeout': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:517:5: note: in expansion of macro 'CONN_NOT_NULL_EX' CONN_NOT_NULL_EX(10, GetTimeout, 0); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:517:5: note: in expansion of macro 'CONN_NOT_NULL_EX' CONN_NOT_NULL_EX(10, GetTimeout, 0); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:525:9: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(11, GetTimeout, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:540:9: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(12, GetTimeout, eLOG_Error, errbuf, 0); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_Wait': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:556:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(13, Wait); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:556:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(13, Wait); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX' #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:600:9: note: in expansion of macro 'CONN_LOG' CONN_LOG(event != eIO_Read ? 15 : 14, Wait, level, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 's_CONN_Write': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX' #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:621:9: note: in expansion of macro 'CONN_LOG' CONN_LOG(16, Write, eLOG_Critical, "Cannot write data"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX' #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:661:13: note: in expansion of macro 'CONN_LOG' CONN_LOG(17, Write, level, "Unable to write data"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_Write': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:703:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(18, Write); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:703:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(18, Write); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_PushBack': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:738:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(19, PushBack); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:738:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(19, PushBack); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_Flush': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:758:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(20, Flush); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:758:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(20, Flush); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX' #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:772:9: note: in expansion of macro 'CONN_LOG' CONN_LOG(21, Flush, eLOG_Warning, "Failed to flush"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 's_CONN_Read': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX' #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:797:9: note: in expansion of macro 'CONN_LOG' CONN_LOG(22, Read, eLOG_Critical, "Cannot read data"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:836:17: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(32, Read, eLOG_Critical, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:79:39: note: in expansion of macro 'CONN_LOG_EX' #define CONN_LOG(s_c, f_n, lvl, msg) CONN_LOG_EX(s_c, f_n, lvl, msg, status) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:862:13: note: in expansion of macro 'CONN_LOG' CONN_LOG(23, Read, level, "Unable to read data"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_Read': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:913:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(24, Read); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:913:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(24, Read); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_ReadLine': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:962:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(25, ReadLine); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:962:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(25, ReadLine); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:1010:17: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(35, ReadLine, eLOG_Critical, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_Status': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:1029:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(26, Status); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:1029:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(26, Status); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_Close': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:1068:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(27, Close); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:1068:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(27, Close); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_SetCallback': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:1087:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(28, SetCallback); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:1087:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(28, SetCallback); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:1093:9: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(29, SetCallback, eLOG_Error, errbuf, eIO_InvalidArg); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c: In function 'CONN_GetSOCK': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:102:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:1114:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(36, GetSOCK); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:68:7: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:109:11: note: in expansion of macro 'CONN_LOG_EX' CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:114:34: note: in expansion of macro 'CONN_NOT_NULL_EX' #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connection.c:1114:5: note: in expansion of macro 'CONN_NOT_NULL' CONN_NOT_NULL(36, GetSOCK); ^ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connector.c -o ncbi_connector.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:56:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connector.c:34: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connector.c: In function 'METACONN_Remove': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connector.c:42:3: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connector.c:64:13: note: in expansion of macro 'METACONN_LOG' METACONN_LOG(34, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connector.c: In function 'METACONN_Add': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connector.c:42:3: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_connector.c:92:9: note: in expansion of macro 'METACONN_LOG' METACONN_LOG(33, eLOG_Error, ^ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:56:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket_connector.c:38: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket_connector.c: In function 's_VT_Open': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket_connector.c:171:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(163, eLOG_Error, ^ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:56:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:38: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c: In function 's_Adjust': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:303:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(2, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:317:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(17, eLOG_Trace, ^ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:338:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(3, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:352:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(18, eLOG_Trace, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:362:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(4, eLOG_Critical, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:386:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(1, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c: In function 's_Connect': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:498:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(5, eLOG_Critical, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:228:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:152:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:612:25: note: in expansion of macro 'CORE_LOGF_ERRNO_X' CORE_LOGF_ERRNO_X(20, eLOG_Error, error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c: In function 's_ConnectAndSend': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:814:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(6, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c: In function 's_ReadHeader': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:910:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(7, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:944:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(8, level, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:232:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:184:5: note: in expansion of macro 'DO_CORE_LOG_DATA' DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:1006:9: note: in expansion of macro 'CORE_DATAF_X' CORE_DATAF_X(9, fatal ? eLOG_Error : eLOG_Note, str, size, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:1042:25: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(10, eLOG_Critical, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:1085:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(22, uuu->flags & fHTTP_SuppressMessages ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:1100:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(11, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:232:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:184:5: note: in expansion of macro 'DO_CORE_LOG_DATA' DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:1154:13: note: in expansion of macro 'CORE_DATAF_X' CORE_DATAF_X(9, eLOG_Note, str, size, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:1264:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(19, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:1269:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(12, err && !(uuu->flags & fHTTP_SuppressMessages) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:1280:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(13, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:232:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:184:5: note: in expansion of macro 'DO_CORE_LOG_DATA' DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:1288:17: note: in expansion of macro 'CORE_DATAF_X' CORE_DATAF_X(14, eLOG_Note, str, n, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:1297:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(15, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c: In function 's_Read': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:1437:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(16, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_connector.c:1485:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(21, eLOG_Warning, ^ make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader/demo' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c -o ncbi_heapmgr.o make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' cd objtools/blast/seqdb_reader/demo/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader/demo' cd objtools/blast/seqdb_reader/test/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:56:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:115: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Create': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:243:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(1, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:264:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(2, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_AttachFast': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:288:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(3, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:297:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(4, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Attach': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:326:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(34, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Find': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:422:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(8, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Alloc': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:132:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:630:9: note: in expansion of macro 'CORE_LOG_X' CORE_LOG_X(6, eLOG_Warning, "Heap Alloc: NULL heap"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:636:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(7, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:680:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(9, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Free': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:132:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:796:9: note: in expansion of macro 'CORE_LOG_X' CORE_LOG_X(10, eLOG_Warning, "Heap Free: NULL heap"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:802:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(11, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:821:21: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(12, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:833:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(13, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:840:5: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(14, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_FreeFast': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:132:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:852:9: note: in expansion of macro 'CORE_LOG_X' CORE_LOG_X(15, eLOG_Warning, "Heap Free: NULL heap"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:858:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(16, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:872:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(17, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:883:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(18, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:890:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(19, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Trim': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:912:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(30, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:947:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(31, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:974:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(32, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Walk': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:996:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(28, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:1010:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(26, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:1013:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(27, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:1025:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(23, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:1112:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(21, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:1127:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(20, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:1145:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(22, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:1156:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(24, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Walk': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:132:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:1172:9: note: in expansion of macro 'CORE_LOG_X' CORE_LOG_X(29, eLOG_Warning, "Heap Walk: NULL heap"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Destroy': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_heapmgr.c:1273:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(33, eLOG_Error, ^ make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader/test' cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/services/unit_test' make[4]: Nothing to be done for 'sources'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/services/unit_test' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service.c -o ncbi_service.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:56:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service.c:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service.c: In function 's_ServiceName': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service.c:81:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(7, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service.c:90:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(8, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service.c: In function 's_Open': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service.c:278:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(1, eLOG_Error, ^ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_host_info.c -o ncbi_host_info.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:56:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_dispd.c:38: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_dispd.c: In function 's_Resolve': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_dispd.c:198:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(1, eLOG_Error, ^ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:56:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service_connector.c:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service_connector.c: In function 's_OpenDispatcher': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service_connector.c:93:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(5, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service_connector.c: In function 's_ParseHeader': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service_connector.c:168:36: warning: format '%n' expects argument of type 'int *', but argument 7 has type 'unsigned int *' [-Wformat=] if (sscanf(header, "%u.%u.%u.%u%n", &i1, &i2, &i3, &i4, &n) < 4 ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service_connector.c:169:44: warning: format '%n' expects argument of type 'int *', but argument 5 has type 'unsigned int *' [-Wformat=] || sscanf(header + n, "%hu%x%n", &uuu->port, &tkt, &m) < 2 ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:56:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service_connector.c:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service_connector.c: In function 's_Open': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service_connector.c:765:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(4, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service_connector.c:787:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(9, net_info->firewall == eFWMode_Fallback ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service_connector.c: In function 's_VT_Open': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_service_connector.c:965:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(6, eLOG_Error, ^ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:56:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:34: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c: In function 's_SendRcpt': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:390:13: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(3, "Recipient address is too long"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:393:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(1, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:401:13: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(4, write_error); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:353:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:404:13: note: in expansion of macro 'SENDMAIL_RETURN2' SENDMAIL_RETURN2(5, proto_error, buf); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c: In function 'CORE_SendMailEx': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:456:9: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(6, "Invalid magic cookie"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:461:9: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(7, "At least one message recipient must be specified"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:353:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:471:9: note: in expansion of macro 'SENDMAIL_RETURN2' SENDMAIL_RETURN2(8, "Cannot connect to sendmail", buffer); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:353:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:478:9: note: in expansion of macro 'SENDMAIL_RETURN2' SENDMAIL_RETURN2(9, "Protocol error in connection init", buffer); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:483:9: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(10, "Unable to get local host name"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:488:9: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(11, "Write error in HELO command"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:353:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:491:9: note: in expansion of macro 'SENDMAIL_RETURN2' SENDMAIL_RETURN2(12, "Protocol error in HELO command", buffer); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:496:9: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(13, "Write error in MAIL command"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:353:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:499:9: note: in expansion of macro 'SENDMAIL_RETURN2' SENDMAIL_RETURN2(14, "Protocol error in MAIL command", buffer); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:520:9: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(15, "Write error in DATA command"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:353:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:522:9: note: in expansion of macro 'SENDMAIL_RETURN2' SENDMAIL_RETURN2(16, "Protocol error in DATA command", buffer); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:553:21: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(32, "Write error in sending Date"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:560:21: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(33, "Write error in sending From"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:568:17: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(17, "Write error in sending Subject"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:575:17: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(18, "Write error in sending To"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:582:17: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(19, "Write error in sending Cc"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:132:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:586:9: note: in expansion of macro 'CORE_LOG_X' CORE_LOG_X(2, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:597:9: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(20, "Write error in sending mailer information"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:624:17: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(21, "Write error while sending custom header"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:627:13: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(22, "Header write error"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:629:13: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(23, "Write error while finalizing custom header"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:637:17: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(24, "Write error in message body delimiter"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:663:17: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(25, "Write error while sending message body"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:666:13: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(26, "Body write error"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:669:13: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(27, "Write error while finalizing message body"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:672:9: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(28, "Write error while finalizing message"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:353:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:677:9: note: in expansion of macro 'SENDMAIL_RETURN2' SENDMAIL_RETURN2(29, "Protocol error in sending message", buffer); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:341:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:680:9: note: in expansion of macro 'SENDMAIL_RETURN' SENDMAIL_RETURN(30, "Write error in QUIT command"); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:353:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(subcode, eLOG_Error, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_sendmail.c:682:9: note: in expansion of macro 'SENDMAIL_RETURN2' SENDMAIL_RETURN2(31, "Protocol error in QUIT command", buffer); ^ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:56:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c:50: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPCloseData': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c:199:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(7, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c:204:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(9, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c:218:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(11, eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c:222:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(8, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c:236:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(1, xxx->send ? eLOG_Error : eLOG_Warning, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPReply': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c:283:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(10, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPCommandEx': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c:359:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(4, eLOG_Trace, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPLogin': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c:592:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(3, eLOG_Trace, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPassive': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c:950:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(2, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPXfer': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c:1110:21: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(5, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPPollCntl': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c:1633:13: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(12, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Open': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c:1899:9: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(13, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Write': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:136:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c:1974:17: note: in expansion of macro 'CORE_LOGF_X' CORE_LOGF_X(6, eLOG_Error, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c: In function 's_CreateConnector': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/connect/ncbi_util.h:141:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:209:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' _mess.func = CORE_CURRENT_FUNCTION; \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:224:5: note: in expansion of macro 'DO_CORE_LOG_X' DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_priv.h:140:5: note: in expansion of macro 'DO_CORE_LOG' DO_CORE_LOG(0, 0, level, \ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_ftp_connector.c:2289:9: note: in expansion of macro 'CORE_LOG' CORE_LOG(eLOG_Critical, "fFTP_UseProxy not yet implemented"); ^ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_lb.c -o ncbi_lb.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_local.c -o ncbi_local.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_base64.c -o ncbi_base64.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_version.c -o ncbi_version.o cd corelib/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' /usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `all'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' cd algo/blast/composition_adjustment/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=composition_adjustment UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/composition_adjustment' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/composition_adjustment' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/composition_adjustment/compo_heap.c -o compo_heap.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/composition_adjustment/compo_mode_condition.c -o compo_mode_condition.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/composition_adjustment/compo_heap.c:142:1: warning: 's_CompoHeapIsValid' defined but not used [-Wunused-function] s_CompoHeapIsValid(BlastCompo_HeapRecord * heapArray, int i, int n) ^ cd util/tables/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=tables UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/tables' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/composition_adjustment/composition_adjustment.c -o composition_adjustment.o /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/tables TMPL=tables -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/tables' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/composition_adjustment/matrix_frequency_data.c -o matrix_frequency_data.o /bin/rm -f libtables.so .libtables.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libtables.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC raw_scoremat.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/composition_adjustment/nlm_linear_algebra.c -o nlm_linear_algebra.o /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libtables.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libtables.so /bin/ln -f .tables.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.tables.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/tables' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/tables' cd connect/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/connect' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect TMPL=xconnect -w -j --jobserver-fds=3,4 all /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/run_with_lock.sh: adjusting base from make_xconnect to make__connect_common per /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/.#lock-map. Waiting for /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/connect/make__connect_common.lock/usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o /bin/rm -f libconnect.so .libconnect.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libconnect.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC ncbi_lbsmd_stub.o ncbi_ansi_ext.o ncbi_buffer.o ncbi_types.o ncbi_priv.o ncbi_core.o ncbi_util.o ncbi_socket.o ncbi_connutil.o ncbi_connection.o ncbi_connector.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_heapmgr.o ncbi_server_info.o ncbi_service.o ncbi_host_info.o ncbi_dispd.o ncbi_service_connector.o ncbi_sendmail.o ncbi_ftp_connector.o ncbi_lb.o ncbi_local.o ncbi_base64.o ncbi_version.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lnsl -lm -lpthread /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/composition_adjustment/redo_alignment.c:190:1: warning: 's_AlignmentsAreSorted' defined but not used [-Wunused-function] s_AlignmentsAreSorted(BlastCompo_Alignment * alignments) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/composition_adjustment/redo_alignment.c:205:1: warning: 's_DistinctAlignmentsLength' defined but not used [-Wunused-function] s_DistinctAlignmentsLength(BlastCompo_Alignment * list) ^ /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libconnect.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libconnect.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libconnect.so /bin/ln -f .connect.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.connect.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/connect' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/connect' cd util/sequtil/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/sequtil' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/sequtil TMPL=sequtil -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/sequtil' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/sequtil/sequtil.cpp -o sequtil.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o /bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libcomposition_adjustment.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libcomposition_adjustment.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libcomposition_adjustment.so /bin/ln -f .composition_adjustment.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.composition_adjustment.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/composition_adjustment' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/composition_adjustment' cd util/creaders/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=creaders UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/creaders' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/creaders TMPL=creaders -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/creaders' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/creaders/alnread.c -o alnread.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/sequtil/sequtil_shared.cpp -o sequtil_shared.o cd objtools/blast/gene_info_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o /bin/rm -f libsequtil.so .libsequtil.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libsequtil.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libsequtil.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libsequtil.so /bin/ln -f .sequtil.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.sequtil.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/sequtil' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/sequtil' cd html/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=html UNIX_PROJ="" sources= configurables=configurables.null /bin/rm -f libcreaders.so .libcreaders.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libcreaders.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC alnread.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/html' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/html TMPL=html -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/html' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/html/node.cpp -o node.o /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcreaders.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libcreaders.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libcreaders.so /bin/ln -f .creaders.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.creaders.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/creaders' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/creaders' cd corelib/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' /usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `all'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o . Acquired /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/connect/make__connect_common.lock for PID 21532 (make__connect_common) make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/connect' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_socket_cxx.cpp -o ncbi_socket_cxx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/html/html.cpp -o html.o cd util/xregexp/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xregexp UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/xregexp' /usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `all'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/xregexp' cd util/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util' /usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `all'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util' cd serial/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_core_cxx.cpp -o ncbi_core_cxx.o make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial TMPL=serial -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/hookdata.cpp -o hookdata.o /bin/rm -f libgene_info.so .libgene_info.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libgene_info.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libgene_info.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libgene_info.so /bin/ln -f .gene_info.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.gene_info.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader' cd util/compress/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=compress UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api TMPL=compress -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/compress.cpp -o compress.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/hookdatakey.cpp -o hookdatakey.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/stream.cpp -o stream.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/email_diag_handler.cpp -o email_diag_handler.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/typeinfo.cpp -o typeinfo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_conn_streambuf.cpp -o ncbi_conn_streambuf.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/streambuf.cpp -o streambuf.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/html/htmlhelper.cpp -o htmlhelper.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/stream_util.cpp -o stream_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_conn_stream.cpp -o ncbi_conn_stream.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/objectinfo.cpp -o objectinfo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/bzip2.cpp -o bzip2.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/html/page.cpp -o page.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/objectiter.cpp -o objectiter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_conn_test.cpp -o ncbi_conn_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/objectio.cpp -o objectio.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/zlib.cpp -o zlib.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/html/pager.cpp -o pager.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/typeref.cpp -o typeref.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/typemap.cpp -o typemap.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/lzo.cpp -o lzo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_misc.cpp -o ncbi_misc.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/stdtypes.cpp -o stdtypes.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/html/selection.cpp -o selection.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_namedpipe.cpp -o ncbi_namedpipe.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/reader_zlib.cpp -o reader_zlib.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/tar.cpp -o tar.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/html/components.cpp -o components.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_namedpipe_connector.cpp -o ncbi_namedpipe_connector.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_pipe.cpp -o ncbi_pipe.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/enumerated.cpp -o enumerated.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/html/commentdiag.cpp -o commentdiag.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/html/indentstream.cpp -o indentstream.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_pipe_connector.cpp -o ncbi_pipe_connector.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbitime.hpp:62, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_system.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/tar.cpp:52: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp: In function 'std::__cxx11::string ncbi::s_DumpSparseMap(const SHeader*, const char*, const char*, bool)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:4815:49: warning: 'off' may be used uninitialized in this function [-Wmaybe-uninitialized] NStr::UInt8ToString(ret, value, flags, base); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/tar.cpp:740:23: note: 'off' was declared here Uint8 off, gap; ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/html/html_exception.cpp -o html_exception.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/ptrinfo.cpp -o ptrinfo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_conn_reader_writer.cpp -o ncbi_conn_reader_writer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/html/writer_htmlenc.cpp -o writer_htmlenc.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/autoptrinfo.cpp -o autoptrinfo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_userhost.cpp -o ncbi_userhost.o /bin/rm -f libxhtml.so .libxhtml.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxhtml.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC node.o html.o htmlhelper.o page.o pager.o selection.o components.o commentdiag.o indentstream.o html_exception.o writer_htmlenc.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxhtml.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxhtml.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxhtml.so /bin/ln -f .xhtml.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xhtml.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/html' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/html' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/archive.cpp -o archive.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/connect/ncbi_http_session.cpp -o ncbi_http_session.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/continfo.cpp -o continfo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/stltypes.cpp -o stltypes.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/archive_.cpp -o archive_.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/memberid.cpp -o memberid.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/memberlist.cpp -o memberlist.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/item.cpp -o item.o /bin/rm -f libxconnect.so .libxconnect.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxconnect.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC ncbi_lbsmd_stub.o ncbi_ansi_ext.o ncbi_buffer.o ncbi_types.o ncbi_priv.o ncbi_core.o ncbi_util.o ncbi_socket.o ncbi_connutil.o ncbi_connection.o ncbi_connector.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_heapmgr.o ncbi_server_info.o ncbi_service.o ncbi_host_info.o ncbi_dispd.o ncbi_service_connector.o ncbi_sendmail.o ncbi_ftp_connector.o ncbi_lb.o ncbi_local.o ncbi_base64.o ncbi_version.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o ncbi_http_session.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxncbi -lnsl -ldl -lm -lpthread In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/archive_zip.cpp:45:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/miniz/miniz.c:3325:27: warning: always_inline function might not be inlinable [-Wattributes] static MZ_FORCEINLINE int mz_zip_reader_filename_compare(const mz_zip_array *pCentral_dir_array, const mz_zip_array *pCentral_dir_offsets, mz_uint l_index, const char *pR, mz_uint r_len) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/miniz/miniz.c:3314:31: warning: always_inline function might not be inlinable [-Wattributes] static MZ_FORCEINLINE mz_bool mz_zip_reader_string_equal(const char *pA, const char *pB, mz_uint len, mz_uint flags) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/miniz/miniz.c:3225:39: warning: always_inline function might not be inlinable [-Wattributes] static MZ_FORCEINLINE const mz_uint8 *mz_zip_reader_get_cdh(mz_zip_archive *pZip, mz_uint file_index) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/miniz/miniz.c:2991:31: warning: always_inline function might not be inlinable [-Wattributes] static MZ_FORCEINLINE mz_bool mz_zip_reader_filename_less(const mz_zip_array *pCentral_dir_array, const mz_zip_array *pCentral_dir_offsets, mz_uint l_index, mz_uint r_index) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/miniz/miniz.c:2918:31: warning: always_inline function might not be inlinable [-Wattributes] static MZ_FORCEINLINE mz_bool mz_zip_array_push_back(mz_zip_archive *pZip, mz_zip_array *pArray, const void *pElements, size_t n) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/miniz/miniz.c:2913:31: warning: always_inline function might not be inlinable [-Wattributes] static MZ_FORCEINLINE mz_bool mz_zip_array_ensure_room(mz_zip_archive *pZip, mz_zip_array *pArray, size_t n) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/miniz/miniz.c:2906:31: warning: always_inline function might not be inlinable [-Wattributes] static MZ_FORCEINLINE mz_bool mz_zip_array_resize(mz_zip_archive *pZip, mz_zip_array *pArray, size_t new_size, mz_uint growing) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/miniz/miniz.c:2900:31: warning: always_inline function might not be inlinable [-Wattributes] static MZ_FORCEINLINE mz_bool mz_zip_array_reserve(mz_zip_archive *pZip, mz_zip_array *pArray, size_t new_capacity, mz_uint growing) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/miniz/miniz.c:2885:28: warning: always_inline function might not be inlinable [-Wattributes] static MZ_FORCEINLINE void mz_zip_array_clear(mz_zip_archive *pZip, mz_zip_array *pArray) ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/archive_zip.cpp:45:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/miniz/miniz.c:2431:28: warning: always_inline function might not be inlinable [-Wattributes] static MZ_FORCEINLINE void tdefl_record_match(tdefl_compressor *d, mz_uint match_len, mz_uint match_dist) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/miniz/miniz.c:2423:28: warning: always_inline function might not be inlinable [-Wattributes] static MZ_FORCEINLINE void tdefl_record_literal(tdefl_compressor *d, mz_uint8 lit) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/api/miniz/miniz.c:2255:28: warning: always_inline function might not be inlinable [-Wattributes] static MZ_FORCEINLINE void tdefl_find_match(tdefl_compressor *d, mz_uint lookahead_pos, mz_uint max_dist, mz_uint max_match_len, mz_uint *pMatch_dist, mz_uint *pMatch_len) ^ /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxconnect.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxconnect.so /bin/ln -f .xconnect.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xconnect.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/connect' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/connect' cd cgi/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/cgi' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/cgi TMPL=cgi -w -j --jobserver-fds=3,4 all /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/run_with_lock.sh: adjusting base from make_cgi to make__cgi_common per /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/cgi/.#lock-map. make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/cgi' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/cgi/ncbicgi.cpp -o ncbicgi.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/classinfob.cpp -o classinfob.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/member.cpp -o member.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/classinfo.cpp -o classinfo.o /bin/rm -f libxcompress.so .libxcompress.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxcompress.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC compress.o stream.o streambuf.o stream_util.o bzip2.o zlib.o lzo.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxcompress.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxcompress.so /bin/ln -f .xcompress.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xcompress.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/api' cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp -o gene_info_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/variant.cpp -o variant.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/choice.cpp -o choice.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/cgi/cgiapp.cpp -o cgiapp.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/choiceptr.cpp -o choiceptr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/aliasinfo.cpp -o aliasinfo.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie gene_info_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ltest_boost -lgene_info -lxncbi -ldl -lm -lpthread -o gene_info_unit_test strip gene_info_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f gene_info_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/gene_info_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' cd algo/blast/core/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/core' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core TMPL=blast -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/core' /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/aa_ungapped.c -o aa_ungapped.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_TwoHit': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/aa_ungapped.c:489:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/aa_ungapped.c:496:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_OneHit': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/aa_ungapped.c:756:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/aa_ungapped.c:763:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/cgi/cgictx.cpp -o cgictx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/objistr.cpp -o objistr.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_diagnostics.c -o blast_diagnostics.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_engine.c -o blast_engine.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_engine.c: In function 'BLAST_PreliminarySearchEngine': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_engine.c:1261:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] (T_MB_IdbCheckOid)lookup_wrap->check_index_oid; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_engine.c:1387:22: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] ((T_MB_IdxEndSearchIndication)( ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_engine.c:1465:10: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] ((T_MB_IdxEndSearchIndication)( ^ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_extend.c -o blast_extend.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_filter.c -o blast_filter.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_gapalign.c -o blast_gapalign.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/cgi/ncbicgir.cpp -o ncbicgir.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/cgi/ncbires.cpp -o ncbires.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_hits.c -o blast_hits.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/cgi/ref_args.cpp -o ref_args.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_hspstream.c -o blast_hspstream.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_itree.c -o blast_itree.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/cgi/cgi_run.cpp -o cgi_run.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_kappa.c -o blast_kappa.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/objostr.cpp -o objostr.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_lookup.c -o blast_lookup.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_aalookup.c -o blast_aalookup.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/cgi/cgi_util.cpp -o cgi_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/cgi/cgi_serial.cpp -o cgi_serial.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_aascan.c -o blast_aascan.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_aascan.c: In function 'BlastChooseProteinScanSubject': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_aascan.c:572:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->scansub_callback = (void *)s_BlastAaScanSubject; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_aascan.c:575:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->scansub_callback = (void *)s_BlastSmallAaScanSubject; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_aascan.c:580:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->scansub_callback = (void *)s_BlastCompressedAaScanSubject; ^ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nalookup.c -o blast_nalookup.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c -o blast_nascan.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c: In function 's_NaChooseScanSubject': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:296:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastNaScanSubject_8_4; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:298:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastNaScanSubject_Any; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c: In function 's_SmallNaChooseScanSubject': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:1325:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_4_1; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:1327:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:1332:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_5_1; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:1334:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:1339:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_6_1; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:1341:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_6_2; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:1343:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:1348:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_1; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:1350:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_2; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:1352:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_7_3; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:1354:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_Any; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:1359:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup->scansub_callback = (void *)s_BlastSmallNaScanSubject_8_4; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:1365:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] (void *)s_BlastSmallNaScanSubject_Any; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:1369:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] (void *)s_BlastSmallNaScanSubject_8_1Mod4; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:1373:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] (void *)s_BlastSmallNaScanSubject_8_2Mod4; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:1377:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] (void *)s_BlastSmallNaScanSubject_8_3Mod4; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c: In function 's_MBChooseScanSubject': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2583:24: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] (void *)s_MB_DiscWordScanSubject_TwoTemplates_1; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2585:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_11_18_1; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2587:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_11_21_1; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2589:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MB_DiscWordScanSubject_1; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2597:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_9_1; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2599:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_9_2; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2601:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_Any; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2606:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_10_1; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2608:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_10_2; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2610:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_10_3; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2612:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_Any; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2618:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_Any; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2621:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_11_1Mod4; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2624:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_11_2Mod4; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2627:43: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_11_3Mod4; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2638:39: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] mb_lt->scansub_callback = (void *)s_MBScanSubject_Any; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c: In function 'BlastChooseNucleotideScanSubjectAny': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2657:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] return (void *)s_BlastNaScanSubject_Any; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2660:16: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] return (void *)s_BlastSmallNaScanSubject_Any; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_nascan.c:2662:12: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] return (void *)s_MBScanSubject_Any; ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/cgi/cgi_session.cpp -o cgi_session.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/cgi/cgi_exception.cpp -o cgi_exception.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/cgi/cgiapp_cached.cpp -o cgiapp_cached.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_message.c -o blast_message.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/objcopy.cpp -o objcopy.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_options.c -o blast_options.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_psi.c -o blast_psi.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c -o na_ungapped.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c: In function 's_IsSeedMasked': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:489:15: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] return !(((T_Lookup_Callback)(lookup_wrap->lookup_callback)) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c: In function 'BlastNaWordFinder': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1605:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TNaScanSubjectFunction)lookup->scansub_callback; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1606:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] extend = (TNaExtendFunction)lookup->extend_callback; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1618:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TNaScanSubjectFunction)lookup->scansub_callback; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1619:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] extend = (TNaExtendFunction)lookup->extend_callback; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1626:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TNaScanSubjectFunction)lookup->scansub_callback; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1627:18: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] extend = (TNaExtendFunction)lookup->extend_callback; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1640:23: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] scansub = (TNaScanSubjectFunction) ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c: In function 'MB_IndexedWordFinder': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1706:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] (T_MB_IdbCheckOid)lookup_wrap->check_index_oid; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1708:25: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] (T_MB_IdbGetResults)lookup_wrap->read_indexed_db; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c: In function 'BlastChooseNaExtend': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1778:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup_wrap->lookup_callback = (void *)s_MBLookup; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1782:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastNaExtendDirect; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1785:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastNaExtendAligned; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1787:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastNaExtend; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1791:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup_wrap->lookup_callback = (void *)s_SmallNaLookup; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1795:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastNaExtendDirect; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1799:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastSmallNaExtendAlignedOneByte; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1801:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastSmallNaExtend; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1805:40: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lookup_wrap->lookup_callback = (void *)s_NaLookup; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1809:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastNaExtendDirect; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1812:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastNaExtendAligned; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/na_ungapped.c:1814:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] lut->extend_callback = (void *)s_BlastNaExtend; ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/iterator.cpp -o iterator.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_psi_priv.c -o blast_psi_priv.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_seg.c -o blast_seg.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_seqsrc.c -o blast_seqsrc.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/cgi/user_agent.cpp -o user_agent.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_setup.c -o blast_setup.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/serial.cpp -o serial.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_stat.c -o blast_stat.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_stat.c:5109:15: warning: 's_CalculateNormalProbability' defined but not used [-Wunused-function] static double s_CalculateNormalProbability(double x_, double eps_) ^ /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_traceback.c -o blast_traceback.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/blast_util.c -o blast_util.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/gapinfo.c -o gapinfo.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/greedy_align.c -o greedy_align.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/hspfilter_collector.c -o hspfilter_collector.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/delaybuf.cpp -o delaybuf.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/hspfilter_besthit.c -o hspfilter_besthit.o /bin/rm -f libxcgi.so .libxcgi.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxcgi.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxcgi.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxcgi.so /bin/ln -f .xcgi.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xcgi.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/cgi' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/cgi' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/pack_string.cpp -o pack_string.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/core/hspfilter_culling.c -o hspfilter_culling.o /usr/bin/gcc -std=gnu11 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include 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.libblast.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libblast.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC aa_ungapped.o blast_diagnostics.o blast_engine.o blast_extend.o blast_filter.o blast_gapalign.o blast_hits.o blast_hspstream.o blast_itree.o blast_kappa.o blast_lookup.o blast_aalookup.o blast_aascan.o blast_nalookup.o blast_nascan.o blast_message.o blast_options.o blast_psi.o na_ungapped.o blast_psi_priv.o blast_seg.o blast_seqsrc.o blast_setup.o blast_stat.o blast_traceback.o blast_util.o gapinfo.o greedy_align.o hspfilter_collector.o hspfilter_besthit.o hspfilter_culling.o link_hsps.o lookup_util.o lookup_wrap.o matrix_freq_ratios.o ncbi_std.o ncbi_math.o blast_encoding.o pattern.o phi_extend.o phi_gapalign.o phi_lookup.o blast_parameters.o blast_posit.o blast_program.o blast_query_info.o blast_tune.o blast_sw.o blast_dynarray.o split_query.o gencode_singleton.o index_ungapped.o blast_traceback_mt_priv.o blast_hspstream_mt_utils.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lcomposition_adjustment -lxconnect -ltables -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libblast.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libblast.so /bin/ln -f .blast.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.blast.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/core' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/core' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/objistrasnb.cpp -o objistrasnb.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/objostrxml.cpp -o objostrxml.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/objistrxml.cpp -o objistrxml.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/objostrjson.cpp -o objostrjson.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/objistrxml.cpp: In member function 'virtual std::__cxx11::string ncbi::CObjectIStreamXml::ReadFileHeader()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/objistrxml.cpp:583:33: warning: variable 'docType' set but not used [-Wunused-but-set-variable] CTempString docType = ReadName(SkipWS()); ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/objistrjson.cpp -o objistrjson.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/serializable.cpp -o serializable.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/serialobject.cpp -o serialobject.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/pathhook.cpp -o pathhook.o /bin/rm -f libxser.so .libxser.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxser.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC hookdata.o hookdatakey.o typeinfo.o objectinfo.o objectiter.o objectio.o typeref.o typemap.o stdtypes.o enumerated.o ptrinfo.o autoptrinfo.o continfo.o stltypes.o memberid.o memberlist.o item.o classinfob.o member.o classinfo.o variant.o choice.o choiceptr.o aliasinfo.o objistr.o objostr.o objcopy.o iterator.o serial.o delaybuf.o pack_string.o exception.o objhook.o objlist.o objstack.o objostrasn.o objistrasn.o objostrasnb.o objistrasnb.o objostrxml.o objistrxml.o objostrjson.o objistrjson.o serializable.o serialobject.o pathhook.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxser.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxser.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxser.so /bin/ln -f .xser.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xser.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial' cd serial/datatool/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=datatool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial/datatool' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/datatool TMPL=datatool -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial/datatool' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/datatool/datatool.cpp -o datatool.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/datatool/type.cpp -o type.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/datatool/namespace.cpp -o namespace.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/datatool/statictype.cpp -o statictype.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/datatool/enumtype.cpp -o enumtype.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/datatool/reftype.cpp -o reftype.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/datatool/unitype.cpp -o unitype.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/datatool/blocktype.cpp -o blocktype.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/datatool/choicetype.cpp -o choicetype.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/datatool/typestr.cpp -o typestr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/datatool/ptrstr.cpp -o ptrstr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/datatool/stdstr.cpp -o stdstr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/datatool/classstr.cpp -o classstr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE 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-D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/serial/datatool/traversal_spec_file_parser.cpp -o traversal_spec_file_parser.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie datatool.o type.o namespace.o statictype.o enumtype.o reftype.o unitype.o blocktype.o choicetype.o typestr.o ptrstr.o stdstr.o classstr.o enumstr.o stlstr.o choicestr.o choiceptrstr.o value.o mcontainer.o module.o moduleset.o generate.o filecode.o code.o fileutil.o alexer.o aparser.o parser.o lexer.o exceptions.o comments.o srcutil.o dtdaux.o dtdlexer.o dtdparser.o rpcgen.o aliasstr.o xsdlexer.o xsdparser.o wsdllexer.o wsdlparser.o wsdlstr.o traversal_pattern_match_callback.o traversal_code_generator.o traversal_merger.o traversal_node.o traversal_spec_file_parser.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxser -lxutil -lxncbi -ldl -lm -lpthread -o datatool strip datatool /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f datatool /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial/datatool' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial/datatool' cd objects/general/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources cd objects/biblio/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources cd objects/medline/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources cd objects/pub/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/general' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh general all make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/biblio' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/medline' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh biblio all make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pub' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh medline all cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pub && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh pub all Platform not defined for Linux ppc64le -- please fix me Platform not defined for Linux ppc64le -- please fix me /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m general.asn -M "" -oA -oc general -or objects/general -odi -od general.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd general.dump Platform not defined for Linux ppc64le -- please fix me /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m biblio.asn -M "objects/general/general.asn" -oA -oc biblio -or objects/biblio -odi -od biblio.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd biblio.dump Platform not defined for Linux ppc64le -- please fix me /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medline -or objects/medline -odi -od medline.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pub' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pub -or objects/pub -odi -od pub.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pub.dump datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general' datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio' datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pub' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio' /usr/bin/make[4] (Makefile.general.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/general' cd objects/seqcode/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pub' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pub' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqcode' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqcode && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh seqcode all /usr/bin/make[4] (Makefile.medline.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/medline' cd objects/seq/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.biblio.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/biblio' cd objects/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pub' cd objects/genomecoll/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastdb' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seq' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastdb && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh blastdb all make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/genomecoll' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/genomecoll && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh genome_collection all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seq' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/Makefile.sources builddir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -w -j --jobserver-fds=3,4 all Platform not defined for Linux ppc64le -- please fix me /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seq' status=0 ; \ for x in seqalign seqblock seqfeat seqloc seqres seqtable; do \ d=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/../$x ; \ (cd $d && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh) || status=9 ; \ test -f ${x}__.cpp || \ echo "#include \"../$x/${x}__.cpp\"" > ${x}__.cpp ; \ test -f ${x}___.cpp || \ echo "#include \"../$x/${x}___.cpp\"" > ${x}___.cpp ; \ done ; \ exit $status Platform not defined for Linux ppc64le -- please fix me make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqcode' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m seqcode.asn -M "" -oA -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastdb' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA -oc blastdb -or objects/blastdb -odi -od blastdb.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastdb.dump Platform not defined for Linux ppc64le -- please fix me /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqcode' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/genomecoll' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastdb' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqcode' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastdb' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqcode' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastdb' Platform not defined for Linux ppc64le -- please fix me /usr/bin/make[4] (Makefile.seqcode.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqcode' cd objects/seqset/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=seqalign MODULE_PATH=objects/seqalign MODULE_ASN=seqalign.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline/medline.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqalign' make[7]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. /usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'. make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqset' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastdb' cd objects/scoremat/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/genomecoll' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m seqalign.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqalign -or objects/seqalign -odi -od seqalign.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqalign.dump cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqset && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh seqset all make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/scoremat' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/scoremat && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh scoremat all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/genomecoll' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/genomecoll' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/genomecoll && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh gencoll_client all datatool: 2.12.0 make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqalign' Platform not defined for Linux ppc64le -- please fix me /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline/medline.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all Platform not defined for Linux ppc64le -- please fix me make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqset' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA -oc seqset -or objects/seqset -odi -od seqset.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/scoremat' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA -oc scoremat -or objects/scoremat -odi -od scoremat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd scoremat.dump Platform not defined for Linux ppc64le -- please fix me /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all datatool: 2.12.0 Platform not defined for Linux ppc64le -- please fix me make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqset' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/genomecoll' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA -oc gencoll_client -or objects/genomecoll -odi -od gencoll_client.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gencoll_client.dump datatool: 2.12.0 /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=seqblock MODULE_PATH=objects/seqblock MODULE_ASN=seqblock.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline/medline.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/scoremat' make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqblock' make[7]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m seqblock.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqblock -or objects/seqblock -odi -od seqblock.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqblock.dump make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqset' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/scoremat' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/scoremat' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqset' datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/genomecoll' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/genomecoll' /usr/bin/make[4] (Makefile.scoremat.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.seqset.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/scoremat' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqset' cd objects/seqedit/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources cd objects/submit/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/genomecoll' make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqblock' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqedit' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/submit' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/submit && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh submit all cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqedit && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh seqedit all /usr/bin/make[4] (Makefile.genome_collection.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.gencoll_client.lib): Nothing to be done for `export-headers'. Platform not defined for Linux ppc64le -- please fix me Platform not defined for Linux ppc64le -- please fix me /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=seqfeat MODULE_PATH=objects/seqfeat MODULE_ASN=seqfeat.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/pub/pub objects/seqloc/seqloc objects/seq/seq' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline/medline.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pub/pub.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqfeat' make[7]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m seqfeat.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn" -oA -oc seqfeat -or objects/seqfeat -odi -od seqfeat.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqfeat.dump make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/submit' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA -oc submit -or objects/submit -odi -od submit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd submit.dump Platform not defined for Linux ppc64le -- please fix me /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/genomecoll' cd objects/variation/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqedit' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/submit' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/variation' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/variation && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh variation all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/submit' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/submit' /usr/bin/make[4] (Makefile.submit.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/submit' cd objects/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blast' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blast && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh blast all datatool: 2.12.0 Platform not defined for Linux ppc64le -- please fix me make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqedit' /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pub/pub.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqedit' datatool: 2.12.0 make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/variation' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA -oc variation -or objects/variation -odi -od variation.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqfeat' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqedit' /usr/bin/make[4] (Makefile.seqedit.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqedit' cd objects/id1/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/id1' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/id1 && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh id1 all Platform not defined for Linux ppc64le -- please fix me datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/variation' /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/scoremat/scoremat.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blast' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA -oc blast -or objects/blast -odi -od blast.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/variation' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/variation' Platform not defined for Linux ppc64le -- please fix me /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=seqloc MODULE_PATH=objects/seqloc MODULE_ASN=seqloc.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src /usr/bin/make[4] (Makefile.variation.lib): Nothing to be done for `export-headers'. make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc' make[7]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/variation' cd objects/seqsplit/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m seqloc.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn" -oA -oc seqloc -or objects/seqloc -odi -od seqloc.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqloc.dump make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqsplit' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqsplit && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh seqsplit all Platform not defined for Linux ppc64le -- please fix me /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/id1' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m id1.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn" -oA -oc id1 -or objects/id1 -odi -od id1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id1.dump datatool: 2.12.0 make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc' datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blast' datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/id1' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blast' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/id1' Platform not defined for Linux ppc64le -- please fix me make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/id1' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blast' /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqset/seqset.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqsplit' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump /usr/bin/make[4] (Makefile.id1.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.id1cli.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.xnetblastcli.lib): Nothing to be done for `export-headers'. Platform not defined for Linux ppc64le -- please fix me /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=seqres MODULE_PATH=objects/seqres MODULE_ASN=seqres.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline/medline.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqres' make[7]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m seqres.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA -oc seqres -or objects/seqres -odi -od seqres.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqres.dump datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqsplit' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqsplit' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqsplit' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/id1' cd objects/id2/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources datatool: 2.12.0 make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqres' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blast' cd objects/blastxml/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/id2' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastxml' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastxml && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh blastxml all /usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqsplit' cd objects/blastxml2/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/id2 && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh id2 all make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastxml2' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastxml2 && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh blastxml2 all File blastxml.module not found. Using defaults... Platform not defined for Linux ppc64le -- please fix me Platform not defined for Linux ppc64le -- please fix me /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all File blastxml2.module not found. Using defaults... /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=seqtable MODULE_PATH=objects/seqtable MODULE_ASN=seqtable.asn MODULE_IMPORT='objects/general/general objects/seq/seq objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqtable' make[7]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. Platform not defined for Linux ppc64le -- please fix me Platform not defined for Linux ppc64le -- please fix me make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastxml' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m blastxml.asn -M "" -oA -oc blastxml -or objects/blastxml -odi -od blastxml.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml.dump /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqsplit/seqsplit.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m seqtable.asn -M "objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn" -oA -oc seqtable -or objects/seqtable -odi -od seqtable.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seqtable.dump make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/id2' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA -oc id2 -or objects/id2 -odi -od id2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd id2.dump make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastxml2' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m blastxml2.asn -M "" -oA -oc blastxml2 -or objects/blastxml2 -odi -od blastxml2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd blastxml2.dump datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastxml' datatool: 2.12.0 make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqtable' make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seq' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastxml' datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastxml2' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastxml' datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/id2' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastxml2' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seq' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastxml2' /usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastxml' cd objects/entrez2/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh seq all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/id2' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/id2' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/entrez2' /usr/bin/make[4] (Makefile.blastxml2.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastxml2' cd objects/gbseq/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/entrez2 && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh entrez2 all make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/gbseq' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/gbseq && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh gbseq all /usr/bin/make[4] (Makefile.id2.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.id2cli.lib): Nothing to be done for `export-headers'. Platform not defined for Linux ppc64le -- please fix me /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pub/pub.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline/medline.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqloc/seqloc.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqblock/seqblock.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqalign/seqalign.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqfeat/seqfeat.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqres/seqres.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all Platform not defined for Linux ppc64le -- please fix me /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all Platform not defined for Linux ppc64le -- please fix me make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/id2' cd objects/medlars/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA -oc seq -or objects/seq -odi -od seq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/entrez2' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m entrez2.asn -M "" -oA -oc entrez2 -or objects/entrez2 -odi -od entrez2.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd entrez2.dump /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/medlars' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/gbseq' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m gbseq.asn -M "" -oA -oc gbseq -or objects/gbseq -odi -od gbseq.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd gbseq.dump cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medlars && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh medlars all datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/gbseq' datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/entrez2' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/gbseq' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/gbseq' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/entrez2' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/entrez2' Platform not defined for Linux ppc64le -- please fix me /usr/bin/make[4] (Makefile.gbseq.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/gbseq' cd objects/pubmed/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all /usr/bin/make[4] (Makefile.entrez2.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medlars' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m medlars.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA -oc medlars -or objects/medlars -odi -od medlars.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd medlars.dump make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pubmed' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pubmed && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh pubmed all /usr/bin/make[4] (Makefile.entrez2cli.lib): Nothing to be done for `export-headers'. datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medlars' datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medlars' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medlars' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq' /usr/bin/make[4] (Makefile.medlars.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/medlars' cd objects/mla/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make[4] (Makefile.seq.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seq' cd objects/taxon1/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/mla' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/entrez2' cd objects/valid/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/taxon1' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/mla && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh mla all cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/taxon1 && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh taxon1 all Platform not defined for Linux ppc64le -- please fix me make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/valid' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/valid && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh valid all /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pubmed' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pubmed' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pubmed' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pubmed' Platform not defined for Linux ppc64le -- please fix me /usr/bin/make[4] (Makefile.pubmed.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pubmed' Platform not defined for Linux ppc64le -- please fix me cd objects/valerr/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 sources /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio/biblio.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline/medline.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medlars/medlars.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pubmed/pubmed.asn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/valerr' cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/valerr && /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/new_module.sh valerr all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/mla' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA -oc mla -or objects/mla -odi -od mla.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd mla.dump /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all Platform not defined for Linux ppc64le -- please fix me make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/taxon1' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA -oc taxon1 -or objects/taxon1 -odi -od taxon1.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd taxon1.dump /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/valid' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m valid.asn -M "" -oA -oc valid -or objects/valid -odi -od valid.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd valid.dump datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/mla' datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/valid' datatool: 2.12.0 make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/taxon1' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/mla' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/valid' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/mla' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/taxon1' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/valid' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/taxon1' Platform not defined for Linux ppc64le -- please fix me /usr/bin/make[4] (Makefile.mla.lib): Nothing to be done for `export-headers'. /usr/bin/make -w -j --jobserver-fds=3,4 -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.module MODULE=valerr MODULE_PATH=objects/valerr MODULE_ASN=valerr.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ DATATOOL=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool MODULE_SEARCH=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src all /usr/bin/make[4] (Makefile.valid.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/valid' cd objects/general/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=general UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/valerr' /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/datatool -oR /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++ -opm /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src -m valerr.asn -M "" -oA -oc valerr -or objects/valerr -odi -od valerr.def -oex '' -ocvs -pch 'ncbi_pch.hpp' -fd valerr.dump /usr/bin/make[4] (Makefile.mlacli.lib): Nothing to be done for `export-headers'. make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/general' /usr/bin/make[4] (Makefile.taxon1.lib): Nothing to be done for `export-headers'. make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/taxon1' datatool: 2.12.0 cd objects/seqcode/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqcode UNIX_PROJ="" sources= configurables=configurables.null make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/valerr' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqcode' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/valerr' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/valerr' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general TMPL=general -w -j --jobserver-fds=3,4 all /usr/bin/make[4] (Makefile.valerr.lib): Nothing to be done for `export-headers'. /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqcode TMPL=seqcode -w -j --jobserver-fds=3,4 all make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/valerr' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/mla' cd objects/blastxml/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blastxml UNIX_PROJ="" sources= configurables=configurables.null cd objects/blastxml2/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blastxml2 UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/general' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general__.cpp -o general__.o make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastxml' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastxml2' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqcode' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqcode/seqcode__.cpp -o seqcode__.o /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastxml TMPL=blastxml -w -j --jobserver-fds=3,4 all /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastxml2 TMPL=blastxml2 -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastxml' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastxml/blastxml__.cpp -o blastxml__.o make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastxml2' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastxml2/blastxml2__.cpp -o blastxml2__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastxml/blastxml___.cpp -o blastxml___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastxml2/blastxml2___.cpp -o blastxml2___.o /bin/rm -f libseqcode.so .libseqcode.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libseqcode.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC seqcode__.o seqcode___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libseqcode.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libseqcode.so /bin/ln -f .seqcode.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.seqcode.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqcode' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqcode' cd objects/entrez2/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=entrez2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/entrez2' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/entrez2 TMPL=entrez2 -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/entrez2' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/entrez2/entrez2__.cpp -o entrez2__.o /bin/rm -f libblastxml.so .libblastxml.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libblastxml.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC blastxml__.o blastxml___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libblastxml.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libblastxml.so /bin/ln -f .blastxml.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.blastxml.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastxml' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastxml' cd objects/gbseq/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=gbseq UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/gbseq' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/gbseq TMPL=gbseq -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/gbseq' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/gbseq/gbseq__.cpp -o gbseq__.o /bin/rm -f libblastxml2.so .libblastxml2.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libblastxml2.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC blastxml2__.o blastxml2___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml2.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libblastxml2.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libblastxml2.so /bin/ln -f .blastxml2.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.blastxml2.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastxml2' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastxml2' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/entrez2/entrez2___.cpp -o entrez2___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/general___.cpp -o general___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/general/uoconv.cpp -o uoconv.o /bin/rm -f libgbseq.so .libgbseq.so.stamp /bin/rm -f libentrez2.so .libentrez2.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libentrez2.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC entrez2__.o entrez2___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread /usr/bin/g++ -std=gnu++11 -shared -o libgbseq.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC gbseq__.o gbseq___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libentrez2.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libentrez2.so /bin/ln -f libgbseq.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libgbseq.so /bin/ln -f .entrez2.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.entrez2.dep /bin/ln -f .gbseq.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.gbseq.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/entrez2' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/gbseq' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/entrez2' cd objects/entrez2/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=entrez2cli UNIX_PROJ="" sources= configurables=configurables.null make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/gbseq' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/entrez2' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/entrez2 TMPL=entrez2cli -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/entrez2' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/entrez2/entrez2_client.cpp -o entrez2_client.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/entrez2/entrez2_client_.cpp -o entrez2_client_.o /bin/rm -f libgeneral.so .libgeneral.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libgeneral.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC general__.o general___.o uoconv.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libgeneral.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libgeneral.so /bin/ln -f .general.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.general.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/general' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/general' cd objects/biblio/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=biblio UNIX_PROJ="" sources= configurables=configurables.null cd objects/valid/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=valid UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/biblio' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/valid' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio TMPL=biblio -w -j --jobserver-fds=3,4 all /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/valid TMPL=valid -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/biblio' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio/biblio__.cpp -o biblio__.o make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/valid' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/valid/valid__.cpp -o valid__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio/biblio___.cpp -o biblio___.o /bin/rm -f libentrez2cli.so .libentrez2cli.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libentrez2cli.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC entrez2_client.o entrez2_client_.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2cli.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libentrez2cli.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libentrez2cli.so /bin/ln -f .entrez2cli.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.entrez2cli.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/entrez2' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/entrez2' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/biblio/citation_base.cpp -o citation_base.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/valid/valid___.cpp -o valid___.o /bin/rm -f libvalid.so .libvalid.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libvalid.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC valid__.o valid___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvalid.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libvalid.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libvalid.so /bin/ln -f .valid.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.valid.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/valid' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/valid' /bin/rm -f libbiblio.so .libbiblio.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libbiblio.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC biblio__.o biblio___.o citation_base.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lgeneral -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libbiblio.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libbiblio.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libbiblio.so /bin/ln -f .biblio.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.biblio.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/biblio' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/biblio' cd objects/medline/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=medline UNIX_PROJ="" sources= configurables=configurables.null cd objects/medlars/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=medlars UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/medline' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/medlars' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline TMPL=medline -w -j --jobserver-fds=3,4 all /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medlars TMPL=medlars -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/medlars' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medlars/medlars__.cpp -o medlars__.o make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/medline' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline/medline__.cpp -o medline__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medlars/medlars___.cpp -o medlars___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/medline/medline___.cpp -o medline___.o /bin/rm -f libmedlars.so .libmedlars.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libmedlars.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC medlars__.o medlars___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedlars.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libmedlars.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libmedlars.so /bin/ln -f .medlars.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.medlars.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/medlars' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/medlars' /bin/rm -f libmedline.so .libmedline.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libmedline.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC medline__.o medline___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lbiblio -lgeneral -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedline.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libmedline.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libmedline.so /bin/ln -f .medline.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.medline.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/medline' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/medline' cd objects/pub/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=pub UNIX_PROJ="" sources= configurables=configurables.null cd objects/pubmed/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=pubmed UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pub' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pubmed' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pub TMPL=pub -w -j --jobserver-fds=3,4 all /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pubmed TMPL=pubmed -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pubmed' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pubmed/pubmed__.cpp -o pubmed__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pubmed/pubmed___.cpp -o pubmed___.o make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pub' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pub/pub__.cpp -o pub__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/pub/pub___.cpp -o pub___.o /bin/rm -f libpubmed.so .libpubmed.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libpubmed.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC pubmed__.o pubmed___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpubmed.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libpubmed.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libpubmed.so /bin/ln -f .pubmed.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.pubmed.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pubmed' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pubmed' /bin/rm -f libpub.so .libpub.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libpub.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC pub__.o pub___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lmedline -lbiblio -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpub.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libpub.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libpub.so /bin/ln -f .pub.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.pub.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pub' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pub' cd objects/seq/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seq UNIX_PROJ="" sources= configurables=configurables.null cd objects/mla/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=mla UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seq' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/mla' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq TMPL=seq -w -j --jobserver-fds=3,4 all /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/mla TMPL=mla -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/mla' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/mla/mla__.cpp -o mla__.o make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seq' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq__.cpp -o seq__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/mla/mla___.cpp -o mla___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include seqalign__.cpp -o seqalign__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include seqblock__.cpp -o seqblock__.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/../seqalign/seqalign__.cpp:9:0, from seqalign__.cpp:1: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/../seqalign/Seq_align.cpp: In member function 'void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/../seqalign/Seq_align.cpp:1387:69: warning: 'void ncbi::objects::CDense_seg::RemapToLoc(ncbi::objects::CDense_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations] SetSegs().SetDenseg().RemapToLoc(row, dst_loc, ignore_strand); ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/../seqalign/seqalign__.cpp:3:0, from seqalign__.cpp:1: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/../seqalign/Dense_seg.cpp:909:6: note: declared here void CDense_seg::RemapToLoc(TDim row, const CSeq_loc& loc, ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/../seqalign/seqalign__.cpp:9:0, from seqalign__.cpp:1: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/../seqalign/Seq_align.cpp:1391:62: warning: 'void ncbi::objects::CStd_seg::RemapToLoc(ncbi::objects::CStd_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations] (*std_it)->RemapToLoc(row, dst_loc, ignore_strand); ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/../seqalign/Seq_align.cpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/../seqalign/seqalign__.cpp:9, from seqalign__.cpp:1: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqalign/Std_seg.hpp:79:26: note: declared here NCBI_DEPRECATED void RemapToLoc(TDim row, ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/../seqalign/seqalign__.cpp:9:0, from seqalign__.cpp:1: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/../seqalign/Seq_align.cpp:1396:68: warning: 'void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations] (*seq_align_it)->RemapToLoc(row, dst_loc, ignore_strand); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/../seqalign/Seq_align.cpp:1370:6: note: declared here void CSeq_align::RemapToLoc(TDim row, ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include seqfeat__.cpp -o seqfeat__.o /bin/rm -f libmla.so .libmla.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libmla.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC mla__.o mla___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmla.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libmla.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libmla.so /bin/ln -f .mla.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.mla.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/mla' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/mla' cd objects/mla/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=mlacli UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/mla' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/mla TMPL=mlacli -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/mla' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/mla/mla_client.cpp -o mla_client.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/mla/mla_client_.cpp -o mla_client_.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include seqloc__.cpp -o seqloc__.o /bin/rm -f libmlacli.so .libmlacli.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libmlacli.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC mla_client.o mla_client_.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmlacli.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libmlacli.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libmlacli.so /bin/ln -f .mlacli.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.mlacli.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/mla' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/mla' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include seqres__.cpp -o seqres__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include seqtable__.cpp -o seqtable__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq___.cpp -o seq___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include seqalign___.cpp -o seqalign___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include seqblock___.cpp -o seqblock___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include seqfeat___.cpp -o seqfeat___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include seqloc___.cpp -o seqloc___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include seqres___.cpp -o seqres___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include seqtable___.cpp -o seqtable___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seqport_util.cpp -o seqport_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq_id_tree.cpp -o seq_id_tree.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq_id_handle.cpp -o seq_id_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq_id_mapper.cpp -o seq_id_mapper.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq_loc_mapper_base.cpp -o seq_loc_mapper_base.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq_align_mapper_base.cpp -o seq_align_mapper_base.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seqlocinfo.cpp -o seqlocinfo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/sofa_map.cpp -o sofa_map.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq_loc_from_string.cpp -o seq_loc_from_string.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seq/seq_loc_reverse_complementer.cpp -o seq_loc_reverse_complementer.o /bin/rm -f libseq.so .libseq.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libseq.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC seq__.o seqalign__.o seqblock__.o seqfeat__.o seqloc__.o seqres__.o seqtable__.o seq___.o seqalign___.o seqblock___.o seqfeat___.o seqloc___.o seqres___.o seqtable___.o seqport_util.o seq_id_tree.o seq_id_handle.o seq_id_mapper.o seq_loc_mapper_base.o seq_align_mapper_base.o seqlocinfo.o sofa_map.o seq_loc_from_string.o seq_loc_reverse_complementer.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseqcode -lpub -lbiblio -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseq.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libseq.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libseq.so /bin/ln -f .seq.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.seq.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seq' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seq' cd objects/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blastdb UNIX_PROJ="" sources= configurables=configurables.null cd objects/genomecoll/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null cd objects/seqset/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqset UNIX_PROJ="" sources= configurables=configurables.null cd objects/variation/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqset' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastdb' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/genomecoll' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/variation' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqset TMPL=seqset -w -j --jobserver-fds=3,4 all /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/variation TMPL=variation -w -j --jobserver-fds=3,4 all /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastdb TMPL=blastdb -w -j --jobserver-fds=3,4 all /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/genomecoll TMPL=genome_collection -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqset' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqset/seqset__.cpp -o seqset__.o make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/variation' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/variation/variation__.cpp -o variation__.o make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/genomecoll' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/genomecoll/genome_collection__.cpp -o genome_collection__.o make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastdb/blastdb__.cpp -o blastdb__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/variation/variation___.cpp -o variation___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blastdb/blastdb___.cpp -o blastdb___.o /bin/rm -f libblastdb.so .libblastdb.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libblastdb.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC blastdb__.o blastdb___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseq -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libblastdb.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libblastdb.so /bin/ln -f .blastdb.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.blastdb.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastdb' cd objects/taxon1/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/taxon1' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/taxon1 TMPL=taxon1 -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/taxon1' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/taxon1/taxon1__.cpp -o taxon1__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqset/seqset___.cpp -o seqset___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/genomecoll/genome_collection___.cpp -o genome_collection___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/taxon1/taxon1___.cpp -o taxon1___.o /bin/rm -f libvariation.so .libvariation.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libvariation.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC variation__.o variation___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libvariation.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libvariation.so /bin/ln -f .variation.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.variation.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/variation' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/variation' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqset/gb_release_file.cpp -o gb_release_file.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/taxon1/taxon1.cpp -o taxon1.o /bin/rm -f libseqset.so .libseqset.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libseqset.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC seqset__.o seqset___.o gb_release_file.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqset.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libseqset.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libseqset.so /bin/ln -f .seqset.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.seqset.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqset' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqset' cd objects/scoremat/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=scoremat UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/scoremat' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/scoremat TMPL=scoremat -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/scoremat' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/scoremat/scoremat__.cpp -o scoremat__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/taxon1/cache.cpp -o cache.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o /bin/rm -f libgenome_collection.so .libgenome_collection.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libgenome_collection.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC genome_collection__.o genome_collection___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgenome_collection.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libgenome_collection.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libgenome_collection.so /bin/ln -f .genome_collection.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.genome_collection.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/genomecoll' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/genomecoll' cd objects/seqedit/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqedit' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqedit TMPL=seqedit -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqedit' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqedit/seqedit__.cpp -o seqedit__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/taxon1/utils.cpp -o utils.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o /bin/rm -f libscoremat.so .libscoremat.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libscoremat.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC scoremat__.o scoremat___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libscoremat.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libscoremat.so /bin/ln -f .scoremat.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.scoremat.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/scoremat' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/scoremat' cd objects/submit/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/submit' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/submit TMPL=submit -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/submit' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/submit/submit__.cpp -o submit__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/submit/submit___.cpp -o submit___.o cd objects/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blast' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blast TMPL=blast -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blast/blast__.cpp -o blast__.o /bin/rm -f libtaxon1.so .libtaxon1.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libtaxon1.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libtaxon1.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libtaxon1.so /bin/ln -f .taxon1.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.taxon1.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/taxon1' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/taxon1' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blast/blast___.cpp -o blast___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blast/names.cpp -o names.o /bin/rm -f libsubmit.so .libsubmit.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libsubmit.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC submit__.o submit___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseqset -lseq -lbiblio -lgeneral -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsubmit.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libsubmit.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libsubmit.so /bin/ln -f .submit.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.submit.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/submit' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/submit' cd objects/id1/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=id1 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/id1' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/id1 TMPL=id1 -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/id1' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/id1/id1__.cpp -o id1__.o /bin/rm -f libseqedit.so .libseqedit.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libseqedit.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC seqedit__.o seqedit___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libseqedit.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libseqedit.so /bin/ln -f .seqedit.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.seqedit.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqedit' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqedit' cd objects/seqsplit/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqsplit' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqsplit TMPL=seqsplit -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqsplit' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqsplit/seqsplit__.cpp -o seqsplit__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/id1/id1___.cpp -o id1___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o cd objects/valerr/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=valerr UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/valerr' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/valerr TMPL=valerr -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/valerr' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/valerr/valerr__.cpp -o valerr__.o /bin/rm -f libid1.so .libid1.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libid1.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC id1__.o id1___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libid1.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libid1.so /bin/ln -f .id1.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.id1.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/id1' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/id1' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/valerr/valerr___.cpp -o valerr___.o cd objtools/format/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xformat UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/format' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format TMPL=xformat -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/format' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/accession_item.cpp -o accession_item.o /bin/rm -f libvalerr.so .libvalerr.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libvalerr.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC valerr__.o valerr___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvalerr.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libvalerr.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libvalerr.so /bin/ln -f .valerr.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.valerr.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/valerr' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/valerr' cd objmgr/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=objmgr UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr TMPL=objmgr -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_table_setters.cpp -o seq_table_setters.o /bin/rm -f libxnetblast.so .libxnetblast.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxnetblast.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC blast__.o blast___.o names.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lscoremat -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblast.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxnetblast.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxnetblast.so /bin/ln -f .xnetblast.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xnetblast.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blast' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blast' cd objtools/readers/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xobjread UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/readers' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers TMPL=xobjread -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/readers' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/read_util.cpp -o read_util.o /bin/rm -f libseqsplit.so .libseqsplit.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libseqsplit.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC seqsplit__.o seqsplit___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqsplit.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libseqsplit.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libseqsplit.so /bin/ln -f .seqsplit.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.seqsplit.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqsplit' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqsplit' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_table_info.cpp -o seq_table_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_annot_info.cpp -o seq_annot_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/format_guess_ex.cpp -o format_guess_ex.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/basecount_item.cpp -o basecount_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/comment_item.cpp -o comment_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/acc_pattern.cpp -o acc_pattern.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/table_field.cpp -o table_field.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/agp_read.cpp -o agp_read.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/agp_read.cpp: In function 'ncbi::CRef ncbi::AgpRead(ncbi::CNcbiIstream&, ncbi::EAgpRead_IdRule, bool, std::vector >*)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/agp_read.cpp:58:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector >&, ncbi::EAgpRead_IdRule, bool, std::vector >*)' is deprecated [-Wdeprecated-declarations] AgpRead(is, entries, component_id_rule, set_gap_data, component_types); ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/agp_read.cpp:33:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/readers/agp_read.hpp:61:6: note: declared here void AgpRead(CNcbiIstream& is, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/agp_read.cpp: In function 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector >&, ncbi::EAgpRead_IdRule, bool, std::vector >*)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/agp_read.cpp:74:74: warning: 'void ncbi::AgpRead(ncbi::CNcbiIstream&, std::vector >&, ncbi::EAgpRead_IdRule, bool, std::vector >*)' is deprecated [-Wdeprecated-declarations] AgpRead(is, bioseqs, component_id_rule, set_gap_data, component_types); ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/agp_read.cpp:33:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/readers/agp_read.hpp:52:6: note: declared here void AgpRead(CNcbiIstream& is, ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/agp_seq_entry.cpp -o agp_seq_entry.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_map_switch.cpp -o seq_map_switch.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/snp_annot_info.cpp -o snp_annot_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/contig_item.cpp -o contig_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/agp_util.cpp -o agp_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/date_item.cpp -o date_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/annot_types_ci.cpp -o annot_types_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/agp_validate_reader.cpp -o agp_validate_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_loc_cvt.cpp -o seq_loc_cvt.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/dbsource_item.cpp -o dbsource_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/annot_selector.cpp -o annot_selector.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/aln_reader.cpp -o aln_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/bed_reader.cpp -o bed_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_descr_ci.cpp -o seq_descr_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/defline_item.cpp -o defline_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/feat_ci.cpp -o feat_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/graph_ci.cpp -o graph_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/feature_item.cpp -o feature_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/annot_object.cpp -o annot_object.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/cigar.cpp -o cigar.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/annot_object_index.cpp -o annot_object_index.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/fasta.cpp -o fasta.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/annot_ci.cpp -o annot_ci.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/feature_item.cpp: In function 'const string& ncbi::objects::s_AaName(int)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/feature_item.cpp:1795:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if ( idx > 0 && idx < ArraySize(s_TrnaList) ) { ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/tse_info.cpp -o tse_info.o cd objects/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xnetblastcli UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blast' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blast TMPL=xnetblastcli -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blast/blastclient.cpp -o blastclient.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o /bin/rm -f libxnetblastcli.so .libxnetblastcli.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxnetblastcli.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC blastclient.o blastclient_.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxnetblast -lxser -lxconnect -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxnetblastcli.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxnetblastcli.so /bin/ln -f .xnetblastcli.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xnetblastcli.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blast' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blast' cd objects/id2/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=id2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/id2' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/id2 TMPL=id2 -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/id2' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/id2/id2__.cpp -o id2__.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/fasta_aln_builder.cpp -o fasta_aln_builder.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objects/id2/id2___.cpp -o id2___.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/getfeature.cpp -o getfeature.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/tse_info_object.cpp -o tse_info_object.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/genome_item.cpp -o genome_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/gff_reader.cpp -o gff_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_entry_info.cpp -o seq_entry_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/ctrl_items.cpp -o ctrl_items.o /bin/rm -f libid2.so .libid2.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libid2.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC id2__.o id2___.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseqsplit -lseq -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libid2.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libid2.so /bin/ln -f .id2.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.id2.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/id2' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/id2' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/bioseq_base_info.cpp -o bioseq_base_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/bioseq_set_info.cpp -o bioseq_set_info.o cd objtools/cleanup/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=cleanup UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/cleanup' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/cleanup TMPL=cleanup -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/cleanup' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/cleanup/autogenerated_cleanup.cpp -o autogenerated_cleanup.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/keywords_item.cpp -o keywords_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/reader_data.cpp -o reader_data.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/microarray_reader.cpp -o microarray_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/bioseq_info.cpp -o bioseq_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/locus_item.cpp -o locus_item.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/microarray_reader.cpp:86:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/readers/microarray_reader.hpp: In constructor 'ncbi::objects::CMicroArrayReader::CMicroArrayReader(int)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/readers/microarray_reader.hpp:114:10: warning: 'ncbi::objects::CMicroArrayReader::m_usescore' will be initialized after [-Wreorder] bool m_usescore; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/readers/microarray_reader.hpp:113:31: warning: 'std::vector >::size_type ncbi::objects::CMicroArrayReader::m_columncount' [-Wreorder] vector::size_type m_columncount; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/microarray_reader.cpp:99:1: warning: when initialized here [-Wreorder] CMicroArrayReader::CMicroArrayReader( ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/phrap.cpp -o phrap.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/cleanup/autogenerated_extended_cleanup.cpp -o autogenerated_extended_cleanup.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/data_source.cpp -o data_source.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/primary_item.cpp -o primary_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/cleanup/cleanup.cpp -o cleanup.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/primary_item.cpp: In member function 'void ncbi::objects::CPrimaryItem::x_GetStrForPrimary(ncbi::objects::CBioseqContext&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/primary_item.cpp:213:63: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if ( ctx.IsRefSeq() && last_stop > -1 && (this_start > (last_stop + 1)) ) { ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/primary_item.cpp:214:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (this_start < (15 + last_stop) ) { ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/reader_base.cpp -o reader_base.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/reference_item.cpp -o reference_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/cleanup/cleanup_utils.cpp -o cleanup_utils.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/readfeat.cpp -o readfeat.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/priority.cpp -o priority.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/segment_item.cpp -o segment_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/cleanup/newcleanupp.cpp -o newcleanupp.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/sequence_item.cpp -o sequence_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/prefetch_impl.cpp -o prefetch_impl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/source_item.cpp -o source_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/rm_reader.cpp -o rm_reader.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/source_item.cpp: In member function 'void ncbi::objects::CSourceItem::x_SetSource(const ncbi::objects::CBioSource&, const ncbi::CSerialObject&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/source_item.cpp:257:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if ( genome >= s_organelle_prefix_size ) { ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/prefetch_manager.cpp -o prefetch_manager.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/version_item.cpp -o version_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/prefetch_manager_impl.cpp -o prefetch_manager_impl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/prefetch_actions.cpp -o prefetch_actions.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/wgs_item.cpp -o wgs_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/wiggle_reader.cpp -o wiggle_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/tsa_item.cpp -o tsa_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/scope.cpp -o scope.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/flat_seqloc.cpp -o flat_seqloc.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/gff3_sofa.cpp -o gff3_sofa.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/gff3_reader.cpp -o gff3_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/heap_scope.cpp -o heap_scope.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/qualifiers.cpp -o qualifiers.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/gtf_reader.cpp -o gtf_reader.o /bin/rm -f libxcleanup.so .libxcleanup.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxcleanup.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o newcleanupp.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxregexp -lpcre /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxcleanup.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxcleanup.so /bin/ln -f .xcleanup.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xcleanup.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/cleanup' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/cleanup' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blast_unit_test_util UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp -o test_objmgr.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/scope_impl.cpp -o scope_impl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/context.cpp -o context.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/gff2_data.cpp -o gff2_data.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp -o blast_test_util.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp: In function 'Uint4 TestUtil::EndianIndependentBufferHash(const char*, Uint4, Uint4, Uint4)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp:257:44: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] Uint4 end_value = *((int *) & end_bytes); ^ /bin/rm -f libblast_unit_test_util.a .libblast_unit_test_util.a.stamp ar cr libblast_unit_test_util.a test_objmgr.o blast_test_util.o /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_unit_test_util.a /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libblast_unit_test_util.a /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libblast_unit_test_util.a /bin/ln -f .blast_unit_test_util.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.blast_unit_test_util.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/scope_info.cpp -o scope_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/utils.cpp -o utils.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/gff2_reader.cpp -o gff2_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/tse_handle.cpp -o tse_handle.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/utils.cpp: In function 'bool ncbi::objects::s_IsTagStart(const const_iterator&, const const_iterator&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/utils.cpp:1346:53: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int possible_str_idx = 0; possible_str_idx < num_possible_tag_starts; ++possible_str_idx ) { ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/utils.cpp: In function 'bool ncbi::objects::CommentHasSuspiciousHtml(const string&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/utils.cpp:1449:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( ; ii < sizeof(bad_html_strings)/sizeof(bad_html_strings[0]) ; ++ii ) { ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gather_items.cpp -o gather_items.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_map.cpp -o seq_map.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/gvf_reader.cpp -o gvf_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_map_ci.cpp -o seq_map_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/vcf_reader.cpp -o vcf_reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_entry_ci.cpp -o seq_entry_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_annot_ci.cpp -o seq_annot_ci.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gather_items.cpp:748:13: warning: 'bool ncbi::objects::s_NsAreGaps(const ncbi::objects::CBioseq_Handle&, ncbi::objects::CBioseqContext&)' defined but not used [-Wunused-function] static bool s_NsAreGaps(const CBioseq_Handle& seq, CBioseqContext& ctx) ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/embl_gather.cpp -o embl_gather.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_table_ci.cpp -o seq_table_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_entry_handle.cpp -o seq_entry_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/bioseq_set_handle.cpp -o bioseq_set_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/best_feat_finder.cpp -o best_feat_finder.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/genbank_gather.cpp -o genbank_gather.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/source_mod_parser.cpp -o source_mod_parser.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/source_mod_parser.cpp: In member function 'void ncbi::objects::CSourceModParser::x_ApplyMods(ncbi::objects::CAutoInitDesc&, ncbi::CTempString)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/source_mod_parser.cpp:663:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if( colon_location == string::npos ) { ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/bioseq_handle.cpp -o bioseq_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_annot_handle.cpp -o seq_annot_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/flat_file_generator.cpp -o flat_file_generator.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/fasta_exception.cpp -o fasta_exception.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/agp_converter.cpp -o agp_converter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/item_formatter.cpp -o item_formatter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/align_ci.cpp -o align_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/data_loader.cpp -o data_loader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/ucscregion_reader.cpp -o ucscregion_reader.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:39:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/item_formatter.cpp:34: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/format/gff3_formatter.hpp: In constructor 'ncbi::objects::CGFF3_Formatter::CGFF3_Formatter()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/format/gff3_formatter.hpp:67:5: warning: 'ncbi::objects::CGFFFormatter::CGFFFormatter()' is deprecated [-Wdeprecated-declarations] { ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbimisc.hpp:1289:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR' # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/format/gff_formatter.hpp:89:26: note: declared here NCBI_DEPRECATED_CTOR(CGFFFormatter(void)); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbimisc.hpp:1289:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR' # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/handle_range.cpp -o handle_range.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/item_formatter.cpp: In static member function 'static ncbi::objects::CFlatItemFormatter* ncbi::objects::CFlatItemFormatter::New(ncbi::objects::CFlatFileConfig::TFormat)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/item_formatter.cpp:93:20: warning: 'CGFFFormatter' is deprecated [-Wdeprecated-declarations] return new CGFFFormatter; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/format/gff3_formatter.hpp:39:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/item_formatter.cpp:58: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/format/gff_formatter.hpp:71:42: note: declared here NCBI_DEPRECATED_CLASS NCBI_FORMAT_EXPORT CGFFFormatter : public CFlatItemFormatter ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/item_formatter.cpp:93:20: warning: 'ncbi::objects::CGFFFormatter::CGFFFormatter()' is deprecated [-Wdeprecated-declarations] return new CGFFFormatter; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:39:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/item_formatter.cpp:34: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/format/gff_formatter.hpp:89:26: note: declared here NCBI_DEPRECATED_CTOR(CGFFFormatter(void)); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbimisc.hpp:1289:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR' # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/item_formatter.cpp:96:20: warning: 'CGFF3_Formatter' is deprecated [-Wdeprecated-declarations] return new CGFF3_Formatter; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/item_formatter.cpp:58:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/format/gff3_formatter.hpp:62:42: note: declared here NCBI_DEPRECATED_CLASS NCBI_FORMAT_EXPORT CGFF3_Formatter : public CGFFFormatter ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/item_formatter.cpp: In function 'void ncbi::objects::s_FormatCitGen(const ncbi::objects::CReferenceItem&, std::__cxx11::string&, const ncbi::objects::CFlatFileConfig&, ncbi::objects::CBioseqContext&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/item_formatter.cpp:875:70: warning: suggest parentheses around '&&' within '||' [-Wparentheses] date.IsStd() && date.GetStd().IsSetYear() && date.GetStd().GetYear() != 0) { ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/objmgr_exception.cpp -o objmgr_exception.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/handle_range_map.cpp -o handle_range_map.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/message_listener.cpp -o message_listener.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/embl_formatter.cpp -o embl_formatter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/object_manager.cpp -o object_manager.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/readers/line_error.cpp -o line_error.o /bin/rm -f libxobjread.so .libxobjread.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxobjread.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC read_util.o format_guess_ex.o acc_pattern.o agp_read.o agp_seq_entry.o agp_util.o agp_validate_reader.o aln_reader.o bed_reader.o cigar.o fasta.o fasta_aln_builder.o getfeature.o gff_reader.o reader_data.o microarray_reader.o phrap.o reader_base.o readfeat.o rm_reader.o wiggle_reader.o gff3_sofa.o gff3_reader.o gtf_reader.o gff2_data.o gff2_reader.o gvf_reader.o vcf_reader.o best_feat_finder.o source_mod_parser.o fasta_exception.o agp_converter.o ucscregion_reader.o message_listener.o line_error.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lsubmit -lseqset -lseq -lpub -lgeneral -lxser -lcreaders -lsequtil -lxutil -lxncbi -ldl -lm -lpthread /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_vector.cpp -o seq_vector.o /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxobjread.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxobjread.so /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/genbank_formatter.cpp -o genbank_formatter.o /bin/ln -f .xobjread.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xobjread.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/readers' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/readers' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqalign_util UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp -o seqalign_cmp.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp -o seqalign_set_convert.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_vector_ci.cpp -o seq_vector_ci.o /bin/rm -f libseqalign_util.a .libseqalign_util.a.stamp ar cr libseqalign_util.a seqalign_cmp.o seqalign_set_convert.o /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqalign_util.a /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libseqalign_util.a /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libseqalign_util.a /bin/ln -f .seqalign_util.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.seqalign_util.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/format_item_ostream.cpp -o format_item_ostream.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/item_ostream.cpp -o item_ostream.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/ostream_text_ostream.cpp -o ostream_text_ostream.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff_gather.cpp -o gff_gather.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seqdesc_ci.cpp -o seqdesc_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/tse_split_info.cpp -o tse_split_info.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff_formatter.cpp -o gff_formatter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/tse_chunk_info.cpp -o tse_chunk_info.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff_formatter.cpp: In member function 'virtual void ncbi::objects::CGFFFormatter::FormatFeature(const ncbi::objects::CFeatureItemBase&, ncbi::objects::IFlatTextOStream&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff_formatter.cpp:217:62: warning: 'static void ncbi::objects::CCdregion_translate::TranslateCdregion(std::__cxx11::string&, const ncbi::objects::CBioseq_Handle&, const ncbi::objects::CSeq_loc&, const ncbi::objects::CCdregion&, bool, bool, bool*, ncbi::objects::CCdregion_translate::ETranslationLengthProblemOptions)' is deprecated [-Wdeprecated-declarations] (s, ctx.GetHandle(), *tentative_stop, cds); ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff_formatter.cpp:38:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/util/sequence.hpp:874:17: note: declared here static void TranslateCdregion (string& prot, ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff_formatter.cpp: In member function 'void ncbi::objects::CGFFFormatter::x_AddFeature(std::__cxx11::list >&, const ncbi::objects::CSeq_loc&, const string&, const string&, const string&, int, const string&, bool, ncbi::objects::CBioseqContext&, bool) const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff_formatter.cpp:557:69: warning: 'static int ncbi::NStr::StringToNumeric(const string&)' is deprecated [-Wdeprecated-declarations] int n = NStr::StringToNumeric((*q)->GetVal()); ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff_formatter.cpp:34: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:248:16: note: declared here static int StringToNumeric(const string& str) { ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/origin_item.cpp -o origin_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/bioseq_ci.cpp -o bioseq_ci.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/ftable_gather.cpp -o ftable_gather.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/ftable_formatter.cpp -o ftable_formatter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/annot_type_index.cpp -o annot_type_index.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gbseq_formatter.cpp -o gbseq_formatter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/flat_file_config.cpp -o flat_file_config.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_loc_mapper.cpp -o seq_loc_mapper.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_align_mapper.cpp -o seq_align_mapper.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/annot_collector.cpp -o annot_collector.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/alignment_item.cpp -o alignment_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff3_formatter.cpp -o gff3_formatter.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:39:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbitime.hpp:62, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff3_formatter.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/format/gff3_formatter.hpp: In constructor 'ncbi::objects::CGFF3_Formatter::CGFF3_Formatter()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/format/gff3_formatter.hpp:67:5: warning: 'ncbi::objects::CGFFFormatter::CGFFFormatter()' is deprecated [-Wdeprecated-declarations] { ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbimisc.hpp:1289:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR' # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/format/gff_formatter.hpp:89:26: note: declared here NCBI_DEPRECATED_CTOR(CGFFFormatter(void)); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbimisc.hpp:1289:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR' # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff3_formatter.cpp: At global scope: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff3_formatter.cpp:116:56: warning: 'CGFF3_Formatter' is deprecated [-Wdeprecated-declarations] IFlatTextOStream& text_os); ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff3_formatter.cpp:37:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/format/gff3_formatter.hpp:62:42: note: declared here NCBI_DEPRECATED_CLASS NCBI_FORMAT_EXPORT CGFF3_Formatter : public CGFFFormatter ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff3_formatter.cpp:131:33: warning: 'CGFF3_Formatter' is deprecated [-Wdeprecated-declarations] CGFF3_Formatter& m_GFF3_Fmt; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff3_formatter.cpp:37:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/format/gff3_formatter.hpp:62:42: note: declared here NCBI_DEPRECATED_CLASS NCBI_FORMAT_EXPORT CGFF3_Formatter : public CGFFFormatter ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff3_formatter.cpp:139:76: warning: 'CGFF3_Formatter' is deprecated [-Wdeprecated-declarations] IFlatTextOStream& text_os) ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gff3_formatter.cpp:37:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/format/gff3_formatter.hpp:62:42: note: declared here NCBI_DEPRECATED_CLASS NCBI_FORMAT_EXPORT CGFF3_Formatter : public CGFFFormatter ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gap_item.cpp -o gap_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/data_loader_factory.cpp -o data_loader_factory.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/genome_project_item.cpp -o genome_project_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/mapped_feat.cpp -o mapped_feat.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_feat_handle.cpp -o seq_feat_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_graph_handle.cpp -o seq_graph_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/sam_formatter.cpp -o sam_formatter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_align_handle.cpp -o seq_align_handle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/tse_assigner.cpp -o tse_assigner.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/cigar_formatter.cpp -o cigar_formatter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/scope_transaction.cpp -o scope_transaction.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/scope_transaction_impl.cpp -o scope_transaction_impl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gather_iter.cpp -o gather_iter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/html_anchor_item.cpp -o html_anchor_item.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/edit_commands_impl.cpp -o edit_commands_impl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/inst_info_map.cpp -o inst_info_map.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/bioseq_edit_commands.cpp -o bioseq_edit_commands.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/gene_finder.cpp -o gene_finder.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/format/flat_qual_slots.cpp -o flat_qual_slots.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/seq_entry_edit_commands.cpp -o seq_entry_edit_commands.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/bioseq_set_edit_commands.cpp -o bioseq_set_edit_commands.o cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast TMPL=blast_app_util -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/blast_app_util.cpp -o blast_app_util.o /bin/rm -f libxformat.so .libxformat.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxformat.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC accession_item.o basecount_item.o comment_item.o contig_item.o date_item.o dbsource_item.o defline_item.o feature_item.o genome_item.o ctrl_items.o keywords_item.o locus_item.o primary_item.o reference_item.o segment_item.o sequence_item.o source_item.o version_item.o wgs_item.o tsa_item.o flat_seqloc.o qualifiers.o context.o utils.o gather_items.o embl_gather.o genbank_gather.o flat_file_generator.o item_formatter.o embl_formatter.o genbank_formatter.o format_item_ostream.o item_ostream.o ostream_text_ostream.o gff_gather.o gff_formatter.o origin_item.o ftable_gather.o ftable_formatter.o gbseq_formatter.o flat_file_config.o alignment_item.o gff3_formatter.o gap_item.o genome_project_item.o sam_formatter.o cigar_formatter.o gather_iter.o html_anchor_item.o inst_info_map.o gene_finder.o flat_qual_slots.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxformat.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxformat.so /bin/ln -f .xformat.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xformat.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/format' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/format' cd objtools/blast/services/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blast_services UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/services' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/services TMPL=blast_services -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/services' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=NETBLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/edit_saver.cpp -o edit_saver.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/unsupp_editsaver.cpp -o unsupp_editsaver.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/edits_db_engine.cpp -o edits_db_engine.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/edits_db_saver.cpp -o edits_db_saver.o /bin/rm -f libblast_services.so .libblast_services.so.stamp /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/annot_finder.cpp -o annot_finder.o /usr/bin/g++ -std=gnu++11 -shared -o libblast_services.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC blast_services.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxnetblastcli -lxnetblast -lxser -lxconnect -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libblast_services.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libblast_services.so /bin/ln -f .blast_services.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.blast_services.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/services' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/services' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/gc_assembly_parser.cpp -o gc_assembly_parser.o /bin/rm -f libblast_app_util.a .libblast_app_util.a.stamp ar cr libblast_app_util.a blast_app_util.o /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libblast_app_util.a /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libblast_app_util.a /bin/ln -f .blast_app_util.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.blast_app_util.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /bin/rm -f libxobjmgr.so .libxobjmgr.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxobjmgr.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC seq_table_setters.o seq_table_info.o seq_annot_info.o table_field.o seq_map_switch.o snp_annot_info.o annot_types_ci.o seq_loc_cvt.o annot_selector.o seq_descr_ci.o feat_ci.o graph_ci.o annot_object.o annot_object_index.o annot_ci.o tse_info.o tse_info_object.o seq_entry_info.o bioseq_base_info.o bioseq_set_info.o bioseq_info.o data_source.o priority.o prefetch_impl.o prefetch_manager.o prefetch_manager_impl.o prefetch_actions.o scope.o heap_scope.o scope_impl.o scope_info.o tse_handle.o seq_map.o seq_map_ci.o seq_entry_ci.o seq_annot_ci.o seq_table_ci.o seq_entry_handle.o bioseq_set_handle.o bioseq_handle.o seq_annot_handle.o align_ci.o data_loader.o handle_range.o objmgr_exception.o handle_range_map.o object_manager.o seq_vector.o seq_vector_ci.o seqdesc_ci.o tse_split_info.o tse_chunk_info.o bioseq_ci.o annot_type_index.o seq_loc_mapper.o seq_align_mapper.o annot_collector.o data_loader_factory.o mapped_feat.o seq_feat_handle.o seq_graph_handle.o seq_align_handle.o tse_assigner.o scope_transaction.o scope_transaction_impl.o edit_commands_impl.o bioseq_edit_commands.o seq_entry_edit_commands.o bioseq_set_edit_commands.o edit_saver.o unsupp_editsaver.o edits_db_engine.o edits_db_saver.o annot_finder.o gc_assembly_parser.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjmgr.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxobjmgr.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxobjmgr.so /bin/ln -f .xobjmgr.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xobjmgr.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr' cd objtools/blast/seqdb_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqdb UNIX_PROJ="" sources= configurables=configurables.null cd objmgr/util/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null cd algo/dustmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xalgodustmask UNIX_PROJ="" sources= configurables=configurables.null cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xreader UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr/util' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/dustmask' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -w -j --jobserver-fds=3,4 all /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask TMPL=xalgodustmask -w -j --jobserver-fds=3,4 all /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/util TMPL=util -w -j --jobserver-fds=3,4 all /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdb.cpp -o seqdb.o make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr/util' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/util/weight.cpp -o weight.o make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/dustmask' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp -o symdust.o make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/dispatcher.cpp -o dispatcher.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_stack.hpp:111:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_Impl; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:1840:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Properties; // Per-thread properties ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:1841:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_DiagBuffer; // Thread's diag buffer ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:1847:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_RequestCtx; // Request context ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:1848:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_DefaultRequestCtx; // Default request context ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2314:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_Host; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2316:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Username; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2317:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_AppName; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2319:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_DefaultSessionId; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2320:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_DefaultHitId; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2326:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_StopWatch; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2327:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Messages; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2335:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_AppLogRC; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2336:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_ErrLogRC; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2337:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_TraceLogRC; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2577:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Messages; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:950:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_StackTrace; ///< Saved stack trace ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:3743:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Encoded; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbimtx.hpp:1016:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_RW; ///< Platform-dependent RW-lock data ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:43:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiargs.hpp: In member function 'ncbi::CArgs* ncbi::CArgDescriptions::CreateArgs(TSize, TArray) const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiargs.hpp:1161:9: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr args(new CArgs()); ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp: At global scope: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:583:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Environ; ///< Cached application env. ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:585:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_DiagStream; ///< Opt., aux., see eDS_ToMemory ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:586:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Arguments; ///< Command-line arguments ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:587:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_ArgDesc; ///< Cmd.-line arg descriptions ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:588:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Args; ///< Parsed cmd.-line args ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:229:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Converter; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp: In member function 'void ncbi::NStaticArray::CPairConverter::Convert(void*, const void*) const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:401:9: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr conv1 ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:404:9: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr conv2 ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/continfo.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiutil.hpp: At global scope: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiutil.hpp:195:9: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] AutoMap(auto_ptr& cache, const Source& source, const ToKey& toKey) ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfob.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfo.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/memberlist.hpp:138:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_ItemsByName; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfob.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfo.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/memberlist.hpp:142:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_ItemsByTag; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfob.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfo.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/memberlist.hpp:145:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_ItemsByOffset; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfo.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfob.hpp:134:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_ContainedTypes; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfo.hpp:141:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_SubClasses; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/enumerated.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/enumvalues.hpp:150:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_NameToValue; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/enumerated.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/enumvalues.hpp:151:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_ValueToName; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:459:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_MappingCollector; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:467:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_AnnotLocsSet; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:472:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_AnnotNames; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:155:14: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr< TMaskList > operator()( const sequence_type & seq ); ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:164:14: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr< TMaskList > operator()( const sequence_type & seq, ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:214:6: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr< CSymDustMasker::TMaskList > ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp: In member function 'std::auto_ptr > > ncbi::CSymDustMasker::operator()(const sequence_type&, ncbi::CSymDustMasker::size_type, ncbi::CSymDustMasker::size_type)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:218:10: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr< TMaskList > res( new TMaskList ); ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp: At global scope: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:288:6: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr< CSymDustMasker::TMaskList > ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp: In member function 'void ncbi::CSymDustMasker::GetMaskedLocs(ncbi::objects::CSeq_id&, const sequence_type&, std::vector >&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:299:10: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr< TMaskList > res = (*this)( seq ); ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:298:59: warning: typedef 'locs_type' locally defined but not used [-Wunused-local-typedefs] typedef std::vector< CConstRef< objects::CSeq_loc > > locs_type; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp: In member function 'ncbi::CRef ncbi::CSymDustMasker::GetMaskedInts(ncbi::objects::CSeq_id&, const sequence_type&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:313:10: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr< TMaskList > res = (*this)( seq ); ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/dustmask/symdust.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ /bin/rm -f libxalgodustmask.so .libxalgodustmask.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxalgodustmask.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC symdust.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxalgodustmask.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxalgodustmask.so /bin/ln -f .xalgodustmask.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xalgodustmask.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/dustmask' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/dustmask' cd objtools/alnmgr/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=alnmgr UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/alnmgr' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr TMPL=alnmgr -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/alnmgr' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/aln_builders.cpp -o aln_builders.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/util/sequence.cpp -o sequence.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/aln_builders.cpp: In function 'void ncbi::BuildAln(ncbi::TAnchoredAlnVec&, ncbi::CAnchoredAln&, const ncbi::CAlnUserOptions&, ncbi::TAlnSeqIdIRef)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/aln_builders.cpp:551:46: warning: typedef 'TPairwiseAlnVector' locally defined but not used [-Wunused-local-typedefs] typedef CAnchoredAln::TPairwiseAlnVector TPairwiseAlnVector; ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp -o seqdbbitset.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/reader.cpp -o reader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/aln_converters.cpp -o aln_converters.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp -o seqdbfilter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/writer.cpp -o writer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp -o seqdbatlas.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/aln_generators.cpp -o aln_generators.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/processors.cpp -o processors.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/util/feature.cpp -o feature.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp -o seqdbalias.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/aln_generators.cpp: In function 'void ncbi::InitSplicedsegFromPairwiseAln(ncbi::objects::CSpliced_seg&, const ncbi::CPairwiseAln&, ncbi::objects::CScope*)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/aln_generators.cpp:538:44: warning: typedef 'TAlnRngColl' locally defined but not used [-Wunused-local-typedefs] typedef CAlignRangeCollection TAlnRngColl; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/util/feature.cpp: In function 'bool ncbi::objects::feature::sFeatureGetChildrenOfSubtype(ncbi::objects::CMappedFeat, ncbi::objects::CSeqFeatData::ESubtype, std::vector&, ncbi::objects::feature::CFeatTree*)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/util/feature.cpp:3164:22: warning: unused variable 'ff' [-Wunused-variable] const CSeq_feat& ff = mf.GetOriginalFeature(); ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp -o seqdbcommon.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/aln_seqid.cpp -o aln_seqid.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/reader_snp.cpp -o reader_snp.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/util/seqtitle.cpp -o seqtitle.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/aln_serial.cpp -o aln_serial.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp -o seqdbfile.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alndiag.cpp -o alndiag.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/seqref.cpp -o seqref.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmap.cpp -o alnmap.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/blob_id.cpp -o blob_id.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp -o seqdbimpl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/split_parser.cpp -o split_parser.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/util/create_defline.cpp -o create_defline.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::CRef ncbi::objects::CAlnMap::CreateAlignFromRange(const std::vector&, ncbi::TSignedSeqPos, ncbi::TSignedSeqPos, ncbi::objects::CAlnMap::ESegmentTrimFlag)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmap.cpp:1469:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (TNumrow row = 0; row < selected_rows.size(); row++) { ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmapprint.cpp -o alnmapprint.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/util/create_defline.cpp: In member function 'std::__cxx11::string ncbi::objects::sequence::CDeflineGenerator::GenerateDefline(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::CDeflineGenerator::TUserFlags)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/util/create_defline.cpp:2275:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int i = 0; i < sizeof (s_tpaPrefixList) / sizeof (const char*); i++) { ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbvolset.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbimpl.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp:39: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp: In member function 'void ncbi::CSeqDBImpl::x_RetSeqBuffer(ncbi::CSeqDBImpl::SSeqResBuffer*, ncbi::CSeqDBLockHold&) const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:1943:53: warning: array subscript is below array bounds [-Warray-bounds] m_Recent[found_at] = m_Recent[found_at-1]; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp:1943:30: warning: array subscript is below array bounds [-Warray-bounds] m_Recent[found_at] = m_Recent[found_at-1]; ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/request_result.cpp -o request_result.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmatch.cpp -o alnmatch.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp -o seqdbvol.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/util/obj_sniff.cpp -o obj_sniff.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmatch.cpp: In static member function 'static bool ncbi::objects::CAlnMixMatches::x_CompareChainScores(const ncbi::CRef&, const ncbi::CRef&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmatch.cpp:76:55: warning: suggest parentheses around '&&' within '||' [-Wparentheses] match1->m_ChainScore == match2->m_ChainScore && ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmatch.cpp: In member function 'void ncbi::objects::CAlnMixMatches::Add(const ncbi::objects::CDense_seg&, ncbi::objects::CAlnMixMatches::TAddFlags)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmatch.cpp:192:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] (aln_seq1->m_StrandScore > 0 && ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmatch.cpp:196:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] aln_seq2->m_StrandScore > 0 && ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmatch.cpp:198:59: warning: suggest parentheses around '&&' within '||' [-Wparentheses] aln_seq2->m_StrandScore < 0 && ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'ncbi::CRef ncbi::CSeqDBVol::x_GetTaxDefline(int, int, ncbi::CSeqDBLockHold&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:1005:43: warning: typedef 'TBDLLIter' locally defined but not used [-Wunused-local-typedefs] typedef TBDLL::iterator TBDLLIter; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:1006:43: warning: typedef 'TBDLLConstIter' locally defined but not used [-Wunused-local-typedefs] typedef TBDLL::const_iterator TBDLLConstIter; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'std::__cxx11::list > ncbi::CSeqDBVol::x_GetTaxonomy(int, int, ncbi::CRef, ncbi::CSeqDBLockHold&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:1058:43: warning: typedef 'TBDLLIter' locally defined but not used [-Wunused-local-typedefs] typedef TBDLL::iterator TBDLLIter; ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/util/seq_loc_util.cpp -o seq_loc_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmerger.cpp -o alnmerger.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/alnmgr/alnmerger.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmerger.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses] seq1->m_SeqIdx == seq2->m_SeqIdx && ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmerger.cpp:140:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] if (m_AlnMixMatches->m_ContainsNA && m_AlnMixMatches->m_ContainsAA || ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_CreateDenseg()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmerger.cpp:1210:44: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if (start_its_i->second->first != -1) { ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmerger.cpp:1232:40: warning: suggest parentheses around '&&' within '||' [-Wparentheses] if (m_AlnMixMatches->m_ContainsNA && m_AlnMixMatches->m_ContainsAA || ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/reader_id1_base.cpp -o reader_id1_base.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp -o seqdbvolset.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmerger.cpp:151:17: warning: 'width2' may be used uninitialized in this function [-Wmaybe-uninitialized] int width1, width2; ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp -o seqdboidlist.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/util/seq_align_util.cpp -o seq_align_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmix.cpp -o alnmix.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp -o reader_id2_base.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/alnmgr/alnmerger.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnmix.cpp:38: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses] seq1->m_SeqIdx == seq2->m_SeqIdx && ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/util/seq_trimmer.cpp -o seq_trimmer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp -o seqdbisam.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnpos_ci.cpp -o alnpos_ci.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function 'int ncbi::CSeqDBIsam::x_DiffCharLease(const string&, ncbi::CSeqDBMemLease&, const string&, ncbi::CSeqDBIsam::TIndx, Uint4, ncbi::CSeqDBIsam::TIndx, bool, ncbi::CSeqDBLockHold&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:450:9: warning: variable 'result' set but not used [-Wunused-but-set-variable] int result(-1); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function 'ncbi::CSeqDBIsam::EErrorCode ncbi::CSeqDBIsam::x_StringSearch(const string&, std::vector >&, std::vector >&, std::vector&, ncbi::CSeqDBLockHold&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:943:9: warning: variable 'found_short' set but not used [-Wunused-but-set-variable] int found_short(-1); ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnsegments.cpp -o alnsegments.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp -o seqdbtax.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/util/bioseqgaps_ci.cpp -o bioseqgaps_ci.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnsegments.cpp:35:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses] seq1->m_SeqIdx == seq2->m_SeqIdx && ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnsegments.cpp: In member function 'void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnsegments.cpp:308:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] if (plus && prev_start_plus_len < start || ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp -o seqdbgilistset.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/reader_service.cpp -o reader_service.o /bin/rm -f libxobjutil.so .libxobjutil.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxobjutil.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC weight.o sequence.o feature.o seqtitle.o create_defline.o obj_sniff.o seq_loc_util.o seq_align_util.o seq_trimmer.o bioseqgaps_ci.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxobjmgr -lseqset -lseq -lpub -lbiblio -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjutil.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxobjutil.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxobjutil.so /bin/ln -f .xobjutil.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xobjutil.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr/util' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr/util' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp -o seqdbexpert.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnseq.cpp:37:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/alnmgr/alnsegments.hpp: In member function 'bool ncbi::objects::CAlnMixSegment::SSeqComp::operator()(const ncbi::objects::CAlnMixSeq*, const ncbi::objects::CAlnMixSeq*) const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objtools/alnmgr/alnsegments.hpp:102:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses] seq1->m_SeqIdx == seq2->m_SeqIdx && ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnseq.cpp: In static member function 'static bool ncbi::objects::CAlnMixSequences::x_CompareChainScores(const ncbi::CRef&, const ncbi::CRef&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnseq.cpp:84:51: warning: suggest parentheses around '&&' within '||' [-Wparentheses] seq1->m_ChainScore == seq2->m_ChainScore && ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/incr_time.cpp -o incr_time.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp -o seqdbblob.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/info_cache.cpp -o info_cache.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp -o seqdbcol.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnvecprint.cpp:136:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] if (left_seg < 0 || seg > right_seg && right_seg > 0) { ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::ClustalStyle(int, ncbi::objects::CAlnVecPrinter::EAlgorithm)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alnvecprint.cpp:300:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] if (left_seg < 0 || seg > right_seg && right_seg > 0) { ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbgimask.cpp -o seqdbgimask.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/sparse_aln.cpp -o sparse_aln.o cd algo/segmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xalgosegmask UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/segmask' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/segmask TMPL=xalgosegmask -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/segmask' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/segmask/segmask.cpp -o segmask.o /bin/rm -f libncbi_xreader.a .libncbi_xreader.a.stamp ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o split_parser.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libncbi_xreader.a /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libncbi_xreader.a /bin/rm -f libncbi_xreader.so .libncbi_xreader.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC dispatcher.o reader.o writer.o processors.o reader_snp.o seqref.o blob_id.o split_parser.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libncbi_xreader.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libncbi_xreader.so /bin/ln -f .ncbi_xreader-static.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.ncbi_xreader-static.dep /bin/ln -f .ncbi_xreader.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.ncbi_xreader.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank' cd objmgr/split/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=id2_split UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr/split' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/split TMPL=id2_split -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr/split' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/split/blob_splitter.cpp -o blob_splitter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/split/blob_splitter_params.cpp -o blob_splitter_params.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/seqdbobj.cpp -o seqdbobj.o /bin/rm -f libxalgosegmask.so .libxalgosegmask.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxalgosegmask.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC segmask.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast -lxobjmgr -lxncbi -ldl -lm -lpthread /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/split/split_blob.cpp -o split_blob.o /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgosegmask.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxalgosegmask.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxalgosegmask.so /bin/ln -f .xalgosegmask.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xalgosegmask.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/segmask' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/segmask' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/split/blob_splitter_impl.cpp -o blob_splitter_impl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/split/blob_splitter_parser.cpp -o blob_splitter_parser.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/sparse_ci.cpp -o sparse_ci.o /bin/rm -f libseqdb.so .libseqdb.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libseqdb.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblastdb -lxobjmgr -lseq -lgeneral -lxser -lsequtil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libseqdb.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libseqdb.so /bin/ln -f .seqdb.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.seqdb.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader' cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xreader_cache UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/cache' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/cache' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp -o reader_cache.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/alntext.cpp -o alntext.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/split/blob_splitter_maker.cpp -o blob_splitter_maker.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/split/id_range.cpp -o id_range.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/score_builder_base.cpp -o score_builder_base.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/split/object_splitinfo.cpp -o object_splitinfo.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/score_builder_base.cpp: In function 'bool ncbi::s_IsProteinToGenomic(ncbi::objects::CScope&, const ncbi::objects::CSeq_align&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/alnmgr/score_builder_base.cpp:519:20: warning: unused variable 'id1' [-Wunused-variable] const CSeq_id& id1 = align.GetSeq_id(1); ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/split/asn_sizer.cpp -o asn_sizer.o /bin/rm -f libxalnmgr.so .libxalnmgr.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxalnmgr.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC aln_builders.o aln_converters.o aln_generators.o aln_seqid.o aln_serial.o alndiag.o alnmap.o alnmapprint.o alnmatch.o alnmerger.o alnmix.o alnpos_ci.o alnsegments.o alnseq.o alnvec.o alnvec_iterator.o alnvecprint.o pairwise_aln.o sparse_aln.o sparse_ci.o alntext.o score_builder_base.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxobjmgr -lseqset -lseq -lxser -ltables -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxalnmgr.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxalnmgr.so /bin/ln -f .xalnmgr.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xalnmgr.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/alnmgr' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/alnmgr' cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xreader_id1 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/id1' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/id1' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/id2' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/id2' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/split/annot_piece.cpp -o annot_piece.o /bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libncbi_xreader_cache.a /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libncbi_xreader_cache.a /bin/rm -f libncbi_xreader_cache.so .libncbi_xreader_cache.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_cache.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC reader_cache.o writer_cache.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libncbi_xreader_cache.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libncbi_xreader_cache.so /bin/ln -f .ncbi_xreader_cache-static.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.ncbi_xreader_cache-static.dep /bin/ln -f .ncbi_xreader_cache.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.ncbi_xreader_cache.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/cache' cd objtools/blast/blastdb_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/blastdb_format' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/blastdb_format' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/blastdb_format/seq_writer.cpp -o seq_writer.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/split/chunk_info.cpp -o chunk_info.o /bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp ar cr libncbi_xreader_id1.a reader_id1.o /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libncbi_xreader_id1.a /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libncbi_xreader_id1.a /bin/rm -f libncbi_xreader_id1.so .libncbi_xreader_id1.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_id1.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC reader_id1.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/split/size.cpp -o size.o /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libncbi_xreader_id1.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libncbi_xreader_id1.so /bin/ln -f .ncbi_xreader_id1-static.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.ncbi_xreader_id1-static.dep /bin/ln -f .ncbi_xreader_id1.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.ncbi_xreader_id1.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/id1' cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp -o bdbloader.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objmgr/split/split_exceptions.cpp -o split_exceptions.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp -o blastdb_dataextract.o /bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp ar cr libncbi_xreader_id2.a reader_id2.o /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libncbi_xreader_id2.a /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libncbi_xreader_id2.a /bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libncbi_xreader_id2.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC reader_id2.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libncbi_xreader_id2.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libncbi_xreader_id2.so /bin/ln -f .ncbi_xreader_id2-static.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.ncbi_xreader_id2-static.dep /bin/ln -f .ncbi_xreader_id2.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.ncbi_xreader_id2.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/id2' cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=seqdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp -o seqdb_unit_test.o /bin/rm -f libid2_split.so .libid2_split.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libid2_split.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC blob_splitter.o blob_splitter_params.o split_blob.o blob_splitter_impl.o blob_splitter_parser.o blob_splitter_maker.o id_range.o object_splitinfo.o asn_sizer.o annot_piece.o chunk_info.o size.o split_exceptions.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxobjmgr -lseqsplit -lseqset -lseq -lgeneral -lxser -lxcompress -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2_split.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libid2_split.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libid2_split.so /bin/ln -f .id2_split.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.id2_split.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr/split' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr/split' cd objtools/blast/seqdb_writer/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=writedb UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_writer' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer TMPL=writedb -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_writer' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/writedb.cpp -o writedb.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp -o cached_sequence.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp: In function 'void s_TestPartialAmbigRange(ncbi::CSeqDB&, int, int, int)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp:78:18: warning: variable 'wholeL' set but not used [-Wunused-but-set-variable] int wholeL(0); ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp -o writedb_impl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp -o blastdb_formatter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp -o local_blastdb_adapter.o /bin/rm -f libncbi_xloader_blastdb.so .libncbi_xloader_blastdb.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_blastdb.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC bdbloader.o cached_sequence.o local_blastdb_adapter.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseqdb -lxobjmgr -lseqset -lseq -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libncbi_xloader_blastdb.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libncbi_xloader_blastdb.so /bin/ln -f .ncbi_xloader_blastdb.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.ncbi_xloader_blastdb.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp -o writedb_volume.o /bin/rm -f libblastdb_format.so .libblastdb_format.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libblastdb_format.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC seq_writer.o blastdb_dataextract.o blastdb_formatter.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseqdb -lxobjutil -lxobjmgr -lseq -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libblastdb_format.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libblastdb_format.so /bin/ln -f .blastdb_format.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.blastdb_format.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/blastdb_format' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/blastdb_format' cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader/demo' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader/demo' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie gene_info_reader_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o gene_info_reader strip gene_info_reader /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_reader /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f gene_info_reader /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/gene_info_reader make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader/demo' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp -o writedb_files.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp -o writedb_isam.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp -o writedb_gimask.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp -o writedb_convert.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp -o writedb_general.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp -o writedb_column.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp -o mask_info_registry.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp -o taxid_set.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/build_db.cpp -o build_db.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp -o multisource_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/criteria.cpp -o criteria.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie seqdb_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ltest_boost -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread -o seqdb_unit_test strip seqdb_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f seqdb_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/seqdb_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=seqdb_demo LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader/demo' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader/demo' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader/test' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader/test' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp -o seqdb_perf.o cd objtools/blast/services/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blast_services_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/services/unit_test' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/services/unit_test' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie seqdb_demo.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o seqdb_demo strip seqdb_demo /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_demo /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f seqdb_demo /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/seqdb_demo make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader/demo' cd objtools/seqmasks_io/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=seqmasks_io UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/seqmasks_io' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/seqmasks_io' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp -o mask_cmdline_args.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie seqdb_perf.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o seqdb_perf strip seqdb_perf /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_perf /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f seqdb_perf /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/seqdb_perf make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader/test' cd algo/blast/dbindex/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xalgoblastdbindex UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/dbindex' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/dbindex' /usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp -o sequence_istream_fasta.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp -o mask_bdb_reader.o /bin/rm -f libwritedb.so .libwritedb.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libwritedb.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC writedb.o writedb_impl.o writedb_volume.o writedb_files.o writedb_isam.o writedb_gimask.o writedb_convert.o writedb_general.o writedb_column.o mask_info_registry.o taxid_set.o build_db.o multisource_util.o criteria.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseqdb -lxobjread -lxobjmgr -lblastdb -lseqset -lseq -lgeneral -lxser -lsequtil -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libwritedb.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libwritedb.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libwritedb.so /bin/ln -f .writedb.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.writedb.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_writer' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_writer' cd objtools/data_loaders/genbank/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/gbloader.cpp -o gbloader.o /usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp -o sequence_istream_bdb.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blast_services_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o blast_services_unit_test /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp -o mask_fasta_reader.o strip blast_services_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_services_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blast_services_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blast_services_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/services/unit_test' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/services/unit_test' cd objtools/data_loaders/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb_rmt UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp -o bdbloader_rmt.o /usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/dbindex/dbindex.cpp -o dbindex.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/seqmasks_io/mask_writer.cpp -o mask_writer.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/dbindex/dbindex.cpp: In function 'const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/dbindex/dbindex.cpp:306:19: warning: variable 'tmp' set but not used [-Wunused-but-set-variable] unsigned long tmp; ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp -o mask_writer_fasta.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o /usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/dbindex/dbindex_factory.cpp -o dbindex_factory.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/seqmasks_io/mask_writer_int.cpp -o mask_writer_int.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/gbload_util.cpp -o gbload_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp -o mask_writer_tab.o /bin/rm -f libncbi_xloader_blastdb_rmt.so .libncbi_xloader_blastdb_rmt.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_blastdb_rmt.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC bdbloader_rmt.o remote_blastdb_adapter.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lncbi_xloader_blastdb -lblast_services -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libncbi_xloader_blastdb_rmt.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so /bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.ncbi_xloader_blastdb_rmt.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/blastdb' cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blastdb_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp -o seq_writer_unit_test.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/dbindex/dbindex_factory.cpp: In member function 'std::__cxx11::string ncbi::blastdbindex::CSubjectMap_Factory_Base::extractSeqVector(ncbi::blastdbindex::CSubjectMap_Factory_Base::TSeqData&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:53: warning: 'std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] string idstr = objects::sequence::GetTitle( bsh ); ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/dbindex/dbindex_factory.cpp:42:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/util/sequence.hpp:274:8: note: declared here string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp -o mask_writer_seqloc.o /bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp ar cr libncbi_xloader_genbank.a gbloader.o gbload_util.o /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libncbi_xloader_genbank.a /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libncbi_xloader_genbank.a /bin/rm -f libncbi_xloader_genbank.so .libncbi_xloader_genbank.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libncbi_xloader_genbank.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC gbloader.o gbload_util.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libncbi_xloader_genbank.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libncbi_xloader_genbank.so /bin/ln -f .ncbi_xloader_genbank-static.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.ncbi_xloader_genbank-static.dep /bin/ln -f .ncbi_xloader_genbank.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.ncbi_xloader_genbank.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank' cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp -o writedb_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o /usr/bin/g++ -std=gnu++11 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/dbindex/dbindex_search.cpp -o dbindex_search.o /bin/rm -f libseqmasks_io.so .libseqmasks_io.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libseqmasks_io.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseqdb -lxobjread -lxobjutil -lxobjmgr -lblastdb -lseqset -lseq -lxser -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libseqmasks_io.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libseqmasks_io.so /bin/ln -f .seqmasks_io.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.seqmasks_io.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/seqmasks_io' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/seqmasks_io' cd algo/winmask/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xalgowinmask UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/winmask' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask TMPL=xalgowinmask -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/winmask' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp -o seq_masker.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_stack.hpp:111:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_Impl; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:1840:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Properties; // Per-thread properties ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:1841:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_DiagBuffer; // Thread's diag buffer ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:1847:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_RequestCtx; // Request context ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:1848:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_DefaultRequestCtx; // Default request context ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2314:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_Host; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2316:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Username; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2317:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_AppName; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2319:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_DefaultSessionId; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2320:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_DefaultHitId; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2326:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_StopWatch; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2327:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Messages; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2335:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_AppLogRC; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2336:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_ErrLogRC; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2337:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_TraceLogRC; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2577:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Messages; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:950:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_StackTrace; ///< Saved stack trace ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistd.hpp:37:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbicntr.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiobj.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:3743:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Encoded; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbimtx.hpp:1016:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_RW; ///< Platform-dependent RW-lock data ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:43:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiargs.hpp: In member function 'ncbi::CArgs* ncbi::CArgDescriptions::CreateArgs(TSize, TArray) const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiargs.hpp:1161:9: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr args(new CArgs()); ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp: At global scope: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:583:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Environ; ///< Cached application env. ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:585:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_DiagStream; ///< Opt., aux., see eDS_ToMemory ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:586:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Arguments; ///< Command-line arguments ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:587:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_ArgDesc; ///< Cmd.-line arg descriptions ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:588:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Args; ///< Parsed cmd.-line args ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:229:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Converter; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp: In member function 'void ncbi::NStaticArray::CPairConverter::Convert(void*, const void*) const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:401:9: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr conv1 ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:404:9: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr conv2 ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/continfo.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiutil.hpp: At global scope: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiutil.hpp:195:9: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] AutoMap(auto_ptr& cache, const Source& source, const ToKey& toKey) ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfob.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfo.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/memberlist.hpp:138:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_ItemsByName; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfob.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfo.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/memberlist.hpp:142:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_ItemsByTag; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfob.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfo.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/memberlist.hpp:145:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_ItemsByOffset; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfo.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfob.hpp:134:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_ContainedTypes; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfo.hpp:141:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_SubClasses; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/enumerated.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/enumvalues.hpp:150:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_NameToValue; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/enumerated.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/enumvalues.hpp:151:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_ValueToName; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:459:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_MappingCollector; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:467:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_AnnotLocsSet; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/winmask/seq_masker_window.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:40: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:472:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_AnnotNames; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie seq_writer_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ltest_boost -lblastdb_format -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread -o blastdb_format_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp: In member function 'ncbi::CSeqMasker::TMaskList* ncbi::CSeqMasker::DoMask(const ncbi::objects::CSeqVector&, ncbi::TSeqPos, ncbi::TSeqPos) const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:152:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr mask(new TMaskList); ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:169:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr window_ptr ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker.cpp:35: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ strip blastdb_format_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_format_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blastdb_format_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blastdb_format_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' cd objtools/align_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=align_format UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/align_format' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format TMPL=align_format -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/align_format' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/format_flags.cpp -o format_flags.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_score_mean.cpp -o seq_masker_score_mean.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/align_format_util.cpp -o align_format_util.o /bin/rm -f libxalgoblastdbindex.so .libxalgoblastdbindex.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxalgoblastdbindex.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast -lseqdb -lxobjread -lxobjutil -lxobjmgr -lseqset -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxalgoblastdbindex.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxalgoblastdbindex.so /bin/ln -f .xalgoblastdbindex.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xalgoblastdbindex.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/dbindex' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/dbindex' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp -o seq_masker_score_mean_glob.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_score_min.cpp -o seq_masker_score_min.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_util.cpp -o seq_masker_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_window.cpp -o seq_masker_window.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_window_ambig.cpp -o seq_masker_window_ambig.o cd objtools/simple/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/simple' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/simple TMPL=xobjsimple -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/simple' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/simple/simple_om.cpp -o simple_om.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_window_pattern.cpp -o seq_masker_window_pattern.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp -o criteria_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp -o seq_masker_window_pattern_ambig.o /bin/rm -f libxobjsimple.so .libxobjsimple.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxobjsimple.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC simple_om.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lncbi_xloader_genbank -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjsimple.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxobjsimple.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxobjsimple.so /bin/ln -f .xobjsimple.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xobjsimple.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/simple' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/simple' cd app/dustmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/dustmasker' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/dustmasker TMPL=dustmasker -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/dustmasker' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/dustmasker/main.cpp -o main.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_ostat_factory.cpp -o seq_masker_ostat_factory.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie writedb_unit_test.o criteria_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o writedb_unit_test /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/dustmasker/dust_mask_app.cpp -o dust_mask_app.o strip writedb_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f writedb_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/writedb_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_ostat.cpp -o seq_masker_ostat.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/showdefline.cpp -o showdefline.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp -o seq_masker_ostat_ascii.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_istat_ascii.cpp -o seq_masker_istat_ascii.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_uset_simple.cpp -o seq_masker_uset_simple.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_istat_factory.cpp -o seq_masker_istat_factory.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_ostat_bin.cpp -o seq_masker_ostat_bin.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_uset_array.cpp -o seq_masker_uset_array.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie main.o dust_mask_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lncbi_xloader_genbank -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lncbi_xreader -lseqdb -lxalgodustmask -lxobjutil -lid2 -lxobjmgr -lxobjread -lid1 -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lseqset -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lcreaders -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o dustmasker /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_istat_bin.cpp -o seq_masker_istat_bin.o strip dustmasker /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f dustmasker /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f dustmasker /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/dustmasker make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/dustmasker' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/dustmasker' cd algo/blast/dbindex/makeindex/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=makeindex LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/dbindex/makeindex' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/dbindex/makeindex' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/dbindex/makeindex/main.cpp -o main.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_ostat_opt.cpp -o seq_masker_ostat_opt.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp -o seq_masker_ostat_opt_ascii.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp -o mkindex_app.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/showalign.cpp -o showalign.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_uset_hash.cpp -o seq_masker_uset_hash.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_istat_oascii.cpp -o seq_masker_istat_oascii.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/tabular.cpp -o tabular.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie main.o mkindex_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxalgoblastdbindex -lblast -lcomposition_adjustment -lseqdb -lblastdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o makembindex /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_istat_oascii.cpp: In constructor 'ncbi::CSeqMaskerIstatOAscii::CSeqMaskerIstatOAscii(const string&, Uint4, Uint4, Uint4, Uint4, Uint4, Uint4)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_istat_oascii.cpp:111:49: warning: 'unit_size' may be used uninitialized in this function [-Wmaybe-uninitialized] if( k == 0U || k > (Uint4)(2*unit_size - 1) ) ^ strip makembindex /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f makembindex /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f makembindex /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/makembindex make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/dbindex/makeindex' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/dbindex/makeindex' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp -o seq_masker_ostat_opt_bin.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_istat_obinary.cpp -o seq_masker_istat_obinary.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/seq_masker_cache_boost.cpp -o seq_masker_cache_boost.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/showalign.cpp: In function 'void ncbi::align_format::s_MakeDomainString(int, int, const string&, std::__cxx11::string&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/showalign.cpp:4409:49: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int i = actual_first_pos, j = 0; i < domain_string.size() - 1 && j < domain_name.size(); i ++, j ++){ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/showalign.cpp:4409:81: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int i = actual_first_pos, j = 0; i < domain_string.size() - 1 && j < domain_name.size(); i ++, j ++){ ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/win_mask_counts_converter.cpp -o win_mask_counts_converter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/win_mask_dup_table.cpp -o win_mask_dup_table.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/win_mask_gen_counts.cpp -o win_mask_gen_counts.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/vectorscreen.cpp -o vectorscreen.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/win_mask_util.cpp -o win_mask_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/seqalignfilter.cpp -o seqalignfilter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/win_mask_config.cpp -o win_mask_config.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/win_mask_util.cpp: In member function 'virtual bool ncbi::CWinMaskUtil::CIdSet_TextMatch::find(const ncbi::objects::CBioseq_Handle&) const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/win_mask_util.cpp:130:45: warning: 'std::__cxx11::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, ncbi::objects::sequence::TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] string id_str = sequence::GetTitle( bsh ); ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/winmask/win_mask_util.cpp:37:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/util/sequence.hpp:274:8: note: declared here string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o /bin/rm -f libalign_format.so .libalign_format.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libalign_format.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o aln_printer.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxalnmgr -lncbi_xloader_genbank -lseqdb -lblast_services -lxobjread -lxobjutil -lxobjmgr -lxnetblast -lblastdb -lgene_info -lseqset -lseq -lgeneral -lxser -lxcgi -lxhtml -ltables -lxncbi -ldl -lm -lpthread /bin/rm -f libxalgowinmask.so .libxalgowinmask.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxalgowinmask.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC seq_masker.o seq_masker_score_mean.o seq_masker_score_mean_glob.o seq_masker_score_min.o seq_masker_util.o seq_masker_window.o seq_masker_window_ambig.o seq_masker_window_pattern.o seq_masker_window_pattern_ambig.o seq_masker_ostat_factory.o seq_masker_ostat.o seq_masker_ostat_ascii.o seq_masker_istat_ascii.o seq_masker_uset_simple.o seq_masker_istat_factory.o seq_masker_ostat_bin.o seq_masker_uset_array.o seq_masker_istat_bin.o seq_masker_ostat_opt.o seq_masker_ostat_opt_ascii.o seq_masker_uset_hash.o seq_masker_istat_oascii.o seq_masker_ostat_opt_bin.o seq_masker_istat_obinary.o seq_masker_cache_boost.o win_mask_counts_converter.o win_mask_dup_table.o win_mask_gen_counts.o win_mask_util.o win_mask_config.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseqmasks_io -lxobjread -lxobjutil -lxobjmgr -lseq -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxalgowinmask.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxalgowinmask.so /bin/ln -f .xalgowinmask.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xalgowinmask.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/winmask' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/winmask' cd algo/blast/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xblast UNIX_PROJ="" sources= configurables=configurables.null cd app/winmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/winmasker' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/api' /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker TMPL=winmasker -w -j --jobserver-fds=3,4 all /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api TMPL=xblast -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/winmasker' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/main.cpp -o main.o /bin/ln -f libalign_format.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libalign_format.so /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_app.cpp -o win_mask_app.o make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_aux.cpp -o blast_aux.o /bin/ln -f .align_format.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.align_format.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/align_format' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/align_format' cd objtools/align_format/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=align_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/align_format/unit_test' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/align_format/unit_test' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp -o showdefline_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp -o win_mask_sdust_masker.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_stack.hpp:111:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_Impl; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:1840:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Properties; // Per-thread properties ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:1841:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_DiagBuffer; // Thread's diag buffer ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:1847:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_RequestCtx; // Request context ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:1848:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_DefaultRequestCtx; // Default request context ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2314:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_Host; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2316:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Username; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2317:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_AppName; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2319:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_DefaultSessionId; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2320:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_DefaultHitId; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2326:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_StopWatch; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2327:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Messages; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2335:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_AppLogRC; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2336:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_ErrLogRC; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2337:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_TraceLogRC; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:42:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbidiag.hpp:2577:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Messages; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/tempstr.hpp:38:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiexpt.hpp:950:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_StackTrace; ///< Saved stack trace ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:45:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbistr.hpp:3743:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Encoded; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbimtx.hpp:1016:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_RW; ///< Platform-dependent RW-lock data ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:43:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiargs.hpp: In member function 'ncbi::CArgs* ncbi::CArgDescriptions::CreateArgs(TSize, TArray) const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiargs.hpp:1161:9: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr args(new CArgs()); ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp: At global scope: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:583:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Environ; ///< Cached application env. ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:585:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_DiagStream; ///< Opt., aux., see eDS_ToMemory ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:586:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Arguments; ///< Command-line arguments ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:587:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_ArgDesc; ///< Cmd.-line arg descriptions ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbi_param.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiapp.hpp:588:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Args; ///< Parsed cmd.-line args ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:229:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_Converter; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp: In member function 'void ncbi::NStaticArray::CPairConverter::Convert(void*, const void*) const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:401:9: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr conv1 ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_map.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqfeat/SeqFeatData.hpp:97, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/tse_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/bioseq_handle.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/util/static_set.hpp:404:9: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr conv2 ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/continfo.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:38, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiutil.hpp: At global scope: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/ncbiutil.hpp:195:9: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] AutoMap(auto_ptr& cache, const Source& source, const ToKey& toKey) ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfob.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfo.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/memberlist.hpp:138:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_ItemsByName; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfob.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfo.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/memberlist.hpp:142:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_ItemsByTag; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfob.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfo.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/memberlist.hpp:145:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_ItemsByOffset; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfo.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfob.hpp:134:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_ContainedTypes; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:41:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/classinfo.hpp:141:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_SubClasses; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/enumerated.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/enumvalues.hpp:150:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_NameToValue; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/enumerated.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objectinfo.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/impl/objecttype.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/objhook.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objects/seqres/Seq_graph.hpp:46, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_object.hpp:41, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/serial/enumvalues.hpp:151:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_ValueToName; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:459:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_MappingCollector; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:467:5: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] auto_ptr m_AnnotLocsSet; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_feat_handle.hpp:43:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/scope.hpp:51, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/seq_vector.hpp:37, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:50, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/objmgr/impl/annot_collector.hpp:472:13: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] mutable auto_ptr m_AnnotNames; ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:155:14: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr< TMaskList > operator()( const sequence_type & seq ); ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:164:14: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr< TMaskList > operator()( const sequence_type & seq, ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp: In member function 'ncbi::CSDustMasker::TMaskList* ncbi::CSDustMasker::operator()(const ncbi::objects::CSeqVector&, const TMaskList&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:104:14: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] std::auto_ptr< TMaskList > result = duster_( ^ In file included from /usr/include/c++/5/memory:81:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/dustmask/symdust.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.hpp:40, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/winmasker/win_mask_sdust_masker.cpp:37: /usr/include/c++/5/bits/unique_ptr.h:49:28: note: declared here template class auto_ptr; ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_options_cxx.cpp -o blast_options_cxx.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie main.o win_mask_app.o win_mask_sdust_masker.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lncbi_xloader_genbank -lxalgowinmask -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lncbi_xreader -lseqdb -lxalgodustmask -lxobjutil -lid2 -lxobjmgr -lxobjread -lid1 -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lseqset -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lblast -lxcompress -lxser -lsequtil -lxconnect -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o windowmasker strip windowmasker /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f windowmasker /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f windowmasker /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/windowmasker make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/winmasker' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/winmasker' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/unit_test/showalign_unit_test.cpp -o showalign_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/unit_test/blast_test_util.cpp -o blast_test_util.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_options_local_priv.cpp -o blast_options_local_priv.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_options_builder.cpp -o blast_options_builder.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_setup_cxx.cpp -o blast_setup_cxx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_seqalign.cpp -o blast_seqalign.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp -o vectorscreen_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_options_handle.cpp -o blast_options_handle.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'char* ncbi::blast::CBlastOptionsHandle::GetFilterString() const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_options_handle.cpp:98:36: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] return m_Opts->GetFilterString(); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_options_handle.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:167:27: note: declared here NCBI_DEPRECATED char* GetFilterString() const; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'void ncbi::blast::CBlastOptionsHandle::SetFilterString(const char*, bool)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_options_handle.cpp:104:37: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] m_Opts->SetFilterString(f, clear); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_options_handle.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:169:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp -o tabularinof_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_nucl_options.cpp -o blast_nucl_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/disc_nucl_options.cpp -o disc_nucl_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp -o aln_printer_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_prot_options.cpp -o blast_prot_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/psiblast_options.cpp -o psiblast_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_rps_options.cpp -o blast_rps_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blastx_options.cpp -o blastx_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/tblastx_options.cpp -o tblastx_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/tblastn_options.cpp -o tblastn_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/rpstblastn_options.cpp -o rpstblastn_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/phiblast_nucl_options.cpp -o phiblast_nucl_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/phiblast_prot_options.cpp -o phiblast_prot_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/pssm_engine.cpp -o pssm_engine.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie showdefline_unit_test.o showalign_unit_test.o blast_test_util.o vectorscreen_unit_test.o tabularinof_unit_test.o aln_printer_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lalign_format -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalnmgr -lncbi_xreader -lseqdb -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lseqset -ltaxon1 -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcgi -lxcompress -lxser -lgene_info -lsequtil -ltest_boost -lxconnect -lxhtml -lxutil -lcreaders -ltables -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o align_format_unit_test strip align_format_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f align_format_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f align_format_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/align_format_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/align_format/unit_test' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/align_format/unit_test' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/local_blast.cpp -o local_blast.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/remote_blast.cpp -o remote_blast.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/seqinfosrc_seqvec.cpp -o seqinfosrc_seqvec.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/seqinfosrc_seqdb.cpp -o seqinfosrc_seqdb.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/seqinfosrc_bioseq.cpp -o seqinfosrc_bioseq.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/seqsrc_multiseq.cpp -o seqsrc_multiseq.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/seqsrc_seqdb.cpp -o seqsrc_seqdb.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/seqsrc_query_factory.cpp -o seqsrc_query_factory.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/bl2seq.cpp -o bl2seq.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_objmgr_tools.cpp -o blast_objmgr_tools.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/repeats_filter_cxx.cpp -o repeats_filter_cxx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_mtlock.cpp -o blast_mtlock.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/psibl2seq.cpp -o psibl2seq.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/local_db_adapter.cpp -o local_db_adapter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/psiblast.cpp -o psiblast.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/psiblast_impl.cpp -o psiblast_impl.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/psiblast_iteration.cpp -o psiblast_iteration.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/psi_pssm_input.cpp -o psi_pssm_input.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/psiblast_impl.cpp: In member function 'void ncbi::blast::CPsiBlastImpl::x_ExtractQueryFromPssm()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/psiblast_impl.cpp:122:23: warning: 'CObjMgrFree_QueryFactory' is deprecated [-Wdeprecated-declarations] m_Query.Reset(new CObjMgrFree_QueryFactory(query_bioseq)); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/psiblast_impl.cpp:45:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/objmgrfree_query_data.hpp:51:42: note: declared here NCBI_DEPRECATED_CLASS NCBI_XBLAST_EXPORT CObjMgrFree_QueryFactory : ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/msa_pssm_input.cpp -o msa_pssm_input.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/psiblast_aux_priv.cpp -o psiblast_aux_priv.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_aux_priv.cpp -o blast_aux_priv.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_advprot_options.cpp -o blast_advprot_options.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/version.cpp -o version.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/psiblast_aux_priv.cpp: In function 'void ncbi::blast::PsiBlastComputePssmScores(ncbi::CRef, const ncbi::blast::CBlastOptions&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/psiblast_aux_priv.cpp:474:41: warning: 'CObjMgrFree_QueryFactory' is deprecated [-Wdeprecated-declarations] CRef seq_fetcher(new CObjMgrFree_QueryFactory(query)); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/psiblast_aux_priv.cpp:47:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/objmgrfree_query_data.hpp:51:42: note: declared here NCBI_DEPRECATED_CLASS NCBI_XBLAST_EXPORT CObjMgrFree_QueryFactory : ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/dust_filter.cpp -o dust_filter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/rps_aux.cpp -o rps_aux.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/search_strategy.cpp -o search_strategy.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/setup_factory.cpp -o setup_factory.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/prelim_stage.cpp -o prelim_stage.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/traceback_stage.cpp -o traceback_stage.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/uniform_search.cpp -o uniform_search.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/local_search.cpp -o local_search.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_results.cpp -o blast_results.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/remote_search.cpp -o remote_search.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/query_data.cpp -o query_data.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/local_search.cpp: In member function 'virtual ncbi::CRef ncbi::blast::CLocalPssmSearch::Run()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/local_search.cpp:171:43: warning: 'CObjMgrFree_QueryFactory' is deprecated [-Wdeprecated-declarations] CRef query_factory(new CObjMgrFree_QueryFactory(query)); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/local_search.cpp:55:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/objmgrfree_query_data.hpp:51:42: note: declared here NCBI_DEPRECATED_CLASS NCBI_XBLAST_EXPORT CObjMgrFree_QueryFactory : ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/objmgr_query_data.cpp -o objmgr_query_data.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/objmgrfree_query_data.cpp -o objmgrfree_query_data.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp -o bioseq_extract_data_priv.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/effsearchspace_calc.cpp -o effsearchspace_calc.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp -o blast_seqinfosrc_aux.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/blast_dbindex.cpp -o blast_dbindex.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/split_query_cxx.cpp -o split_query_cxx.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/split_query_aux_priv.cpp -o split_query_aux_priv.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/split_query_blk.cpp -o split_query_blk.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/winmask_filter.cpp -o winmask_filter.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/subj_ranges_set.cpp -o subj_ranges_set.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/rpsblast_local.cpp -o rpsblast_local.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/seedtop.cpp -o seedtop.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/cdd_pssm_input.cpp -o cdd_pssm_input.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/deltablast_options.cpp -o deltablast_options.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/seedtop.cpp: In member function 'void ncbi::blast::CSeedTop::x_ParsePattern()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/seedtop.cpp:73:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for (int i=0; i<(*unit).length(); ++i) { ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/api/deltablast.cpp -o deltablast.o /bin/rm -f libxblast.so .libxblast.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxblast.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxalgoblastdbindex -lcomposition_adjustment -lxalgowinmask -lxalgodustmask -lseqmasks_io -lseqdb -lxobjread -lvariation -lcreaders -lsubmit -lxobjutil -lblastdb -lxnetblastcli -lxnetblast -lscoremat -lxconnect -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lblast -lseqdb -lseqset -lseq -lgeneral -lxser -lxconnect -lsequtil -ltables -lxutil -lxncbi -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxblast.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxblast.so /bin/ln -f .xblast.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xblast.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/api' cd algo/blast/blastinput/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=blastinput UNIX_PROJ="" sources= configurables=configurables.null cd algo/blast/format/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=xblastformat UNIX_PROJ="" sources= configurables=configurables.null cd algo/blast/igblast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ="" LIB_PROJ=igblast UNIX_PROJ="" sources= configurables=configurables.null cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=aalookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/format' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/blastinput' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/igblast' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput TMPL=blastinput -w -j --jobserver-fds=3,4 all /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format TMPL=xblastformat -w -j --jobserver-fds=3,4 all /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/igblast TMPL=igblast -w -j --jobserver-fds=3,4 all /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/blastinput' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/blast_input.cpp -o blast_input.o make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/format' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/blastfmtutil.cpp -o blastfmtutil.o make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/igblast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp -o aalookup_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/blast_fasta_input.cpp -o blast_fasta_input.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/blastxml_format.cpp -o blastxml_format.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie aalookup_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o aalookup_unit_test /bin/rm -f libigblast.so .libigblast.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libigblast.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC igblast.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -ldl -lm -lpthread strip aalookup_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f aalookup_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f aalookup_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/aalookup_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=aascan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp -o aascan_unit_test.o /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libigblast.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libigblast.so /bin/ln -f .igblast.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.igblast.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/igblast' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/igblast' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blastdiag_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp -o blastdiag_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blastdiag_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o blastdiag_unit_test strip blastdiag_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdiag_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blastdiag_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blastdiag_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blastengine_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp -o blastengine_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/blastxml2_format.cpp -o blastxml2_format.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/blast_scope_src.cpp -o blast_scope_src.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie aascan_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o aascan_unit_test strip aascan_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f aascan_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f aascan_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/aascan_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blastextend_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp -o blastextend_unit_test.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp: In member function 'void blastengine::testBlastpPrelimSearch::test_method()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:441:33: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] options->SetFilterString("L"); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_nucl_options.hpp:36, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:53: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:169:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/blast_args.cpp -o blast_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/blast_format.cpp -o blast_format.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blastengine_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o blastengine_unit_test strip blastengine_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastengine_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blastengine_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blastengine_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blastfilter_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp -o blastfilter_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blastextend_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o blastextend_unit_test strip blastextend_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastextend_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blastextend_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blastextend_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp -o blasthits_unit_test.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/blast_format.cpp:52:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/format/data4xmlformat.hpp:155:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/uniform_search.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/format/blast_format.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/blast_format.cpp:41: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:167:27: note: declared here NCBI_DEPRECATED char* GetFilterString() const; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/blast_format.cpp:54:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/format/data4xml2format.hpp:140:40: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/uniform_search.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/format/blast_format.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/blast_format.cpp:41: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:167:27: note: declared here NCBI_DEPRECATED char* GetFilterString() const; ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/blast_format.cpp: In member function 'void ncbi::CBlastFormat::x_SplitSeqAlign(ncbi::CConstRef, ncbi::objects::CSeq_align_set&, ncbi::objects::CSeq_align_set&, ncbi::blast::CPsiBlastIterationState::TSeqIds&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/blast_format.cpp:476:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] if(count >= m_NumSummary) ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/cmdline_flags.cpp -o cmdline_flags.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blasthits_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o blasthits_unit_test strip blasthits_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blasthits_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blasthits_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blasthits_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/blast_input_aux.cpp -o blast_input_aux.o make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/blastp_args.cpp -o blastp_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/data4xmlformat.cpp -o data4xmlformat.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/blastn_args.cpp -o blastn_args.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/data4xmlformat.cpp:41:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/format/data4xmlformat.hpp:155:39: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] m_Options.GetFilterString(); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/uniform_search.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/format/data4xmlformat.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/data4xmlformat.cpp:41: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:167:27: note: declared here NCBI_DEPRECATED char* GetFilterString() const; ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/rmblastn_args.cpp -o rmblastn_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/data4xml2format.cpp -o data4xml2format.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blastfilter_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o blastfilter_unit_test /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/blastx_args.cpp -o blastx_args.o strip blastfilter_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastfilter_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blastfilter_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blastfilter_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blastoptions_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp -o blastoptions_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/tblastn_args.cpp -o tblastn_args.o In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/data4xml2format.cpp:36:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/format/data4xml2format.hpp: In member function 'virtual std::__cxx11::string ncbi::CCmdLineBlastXML2ReportData::GetFilterString() const': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/format/data4xml2format.hpp:140:40: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] m_Options->GetFilterString(); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/uniform_search.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/format/data4xml2format.hpp:42, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/data4xml2format.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:167:27: note: declared here NCBI_DEPRECATED char* GetFilterString() const; ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::RemoteOptionsTest::test_method()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:71:60: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] BOOST_CHECK_NO_THROW(opts.SetFilterString("m L", false)); /* NCBI_FAKE_WARNING */ ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/test_boost.hpp:109:5: note: in definition of macro 'BOOST_CHECK_NO_THROW_IMPL' S; \ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:169:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::testRemoteFilterString::test_method()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1259:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:169:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1263:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:169:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1268:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:169:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1270:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:169:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1274:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:169:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1276:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:169:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1280:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:169:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1282:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:169:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1286:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] opts.SetFilterString("F", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:169:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1288:38: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] opts.SetFilterString("T", true);/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:169:26: note: declared here NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); ^ In file included from /usr/include/boost/test/unit_test.hpp:19:0, from /usr/include/boost/test/auto_unit_test.hpp:18, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/corelib/test_boost.hpp:66, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::testOptionsDeepCopy::test_method()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:1327:57: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] BOOST_CHECK_EQUAL(string(optsClone->GetFilterString()), string("L;m;")); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options_handle.hpp:36:0, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/bl2seq.hpp:39, from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:36: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/blast_options.hpp:167:27: note: declared here NCBI_DEPRECATED char* GetFilterString() const; ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/tblastx_args.cpp -o tblastx_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/build_archive.cpp -o build_archive.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/psiblast_args.cpp -o psiblast_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/format/vecscreen_run.cpp -o vecscreen_run.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/rpsblast_args.cpp -o rpsblast_args.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blastoptions_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o blastoptions_unit_test strip blastoptions_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastoptions_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blastoptions_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blastoptions_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blastsetup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp -o blastsetup_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/rpstblastn_args.cpp -o rpstblastn_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/igblastn_args.cpp -o igblastn_args.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/igblastp_args.cpp -o igblastp_args.o /bin/rm -f libxblastformat.so .libxblastformat.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libxblastformat.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC blastfmtutil.o blastxml_format.o blastxml2_format.o blast_format.o data4xmlformat.o data4xml2format.o build_archive.o vecscreen_run.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lalign_format -lxalnmgr -lxobjmgr -lxnetblast -lscoremat -lblastxml -lseq -lgeneral -lxser -ltables -lxncbi -lblastxml2 -ldl -lm -lpthread /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblastformat.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libxblastformat.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libxblastformat.so /bin/ln -f .xblastformat.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.xblastformat.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/format' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/format' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=gapinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/deltablast_args.cpp -o deltablast_args.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie gapinfo_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lxalgowinmask -lblast_services -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lxnetblast -lxobjmgr -lxobjread -lscoremat -lseqedit -lsubmit -lblastdb -lgenome_collection -lseqset -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lblast -lxser -lsequtil -ltest_boost -lxconnect -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lnsl -ldl -lm -lpthread -o gapinfo_unit_test strip gapinfo_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f gapinfo_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f gapinfo_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/gapinfo_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=gencode_singleton_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp -o gencode_singleton_unit_test.o cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=hspfilter_besthit_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp -o hspfilter_besthit_unit_test.o /bin/rm -f libblastinput.so .libblastinput.so.stamp /usr/bin/g++ -std=gnu++11 -shared -o libblastinput.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIC blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lalign_format -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lseqdb -lxobjread -lxobjread -lvariation -lcreaders -lsubmit -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxutil -lncbi_xloader_genbank -lncbi_xreader_id2 -lncbi_xreader -lscoremat -lseqset -lseq -lxser -lxutil -lxncbi -ldl -lm -lpthread /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie hspfilter_besthit_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lxobjsimple -lncbi_xloader_genbank -lxalgowinmask -lblast_services -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lseqset -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lblast -lxcompress -lxser -lsequtil -ltest_boost -lxconnect -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o hspfilter_besthit_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib /bin/ln -f libblastinput.so /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib/libblastinput.so /bin/ln -f .blastinput.dep /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/status/.blastinput.dep make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/blastinput' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/blastinput' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=hspfilter_culling_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' strip hspfilter_besthit_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_besthit_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -w -j --jobserver-fds=3,4 all /bin/ln -f hspfilter_besthit_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/hspfilter_besthit_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp -o hspfilter_culling_unit_test.o make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=hspstream_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp -o hspstream_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blastsetup_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o blastsetup_unit_test /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie gencode_singleton_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lxobjsimple -lncbi_xloader_genbank -lxalgowinmask -lblast_services -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lseqset -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lblast -lxcompress -lxser -lsequtil -ltest_boost -lxconnect -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o gencode_singleton_unit_test strip gencode_singleton_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f gencode_singleton_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f gencode_singleton_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/gencode_singleton_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=linkhsp_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' strip blastsetup_unit_test /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -w -j --jobserver-fds=3,4 all /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastsetup_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp -o linkhsp_unit_test.o /bin/ln -f blastsetup_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blastsetup_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=msa2pssm_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp -o msa2pssm_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie hspfilter_culling_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lxobjsimple -lncbi_xloader_genbank -lxalgowinmask -lblast_services -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lseqset -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lblast -lxcompress -lxser -lsequtil -ltest_boost -lxconnect -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o hspfilter_culling_unit_test strip hspfilter_culling_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_culling_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f hspfilter_culling_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/hspfilter_culling_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=ntlookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp -o ntlookup_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie msa2pssm_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lxobjsimple -lncbi_xloader_genbank -lxalgowinmask -lblast_services -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lseqset -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lblast -lxcompress -lxser -lsequtil -ltest_boost -lxconnect -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o msa2pssm_unit_test strip msa2pssm_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f msa2pssm_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f msa2pssm_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/msa2pssm_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=ntscan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp -o ntscan_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp -o hspstream_test_util.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie hspstream_unit_test.o hspstream_test_util.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lxobjsimple -lncbi_xloader_genbank -lxalgowinmask -lblast_services -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lseqset -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lblast -lxcompress -lxser -lsequtil -ltest_boost -lxconnect -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o hspstream_unit_test strip hspstream_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspstream_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f hspstream_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/hspstream_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=optionshandle_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp -o optionshandle_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie linkhsp_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o linkhsp_unit_test strip linkhsp_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f linkhsp_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f linkhsp_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/linkhsp_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=phiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie ntlookup_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o ntlookup_unit_test strip ntlookup_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntlookup_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f ntlookup_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/ntlookup_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=prelimsearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie phiblast_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lxobjsimple -lncbi_xloader_genbank -lxalgowinmask -lblast_services -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lseqset -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lblast -lxcompress -lxser -lsequtil -ltest_boost -lxconnect -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o phiblast_unit_test strip phiblast_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f phiblast_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f phiblast_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/phiblast_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=psibl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp -o psibl2seq_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie ntscan_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o ntscan_unit_test strip ntscan_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntscan_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f ntscan_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/ntscan_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=psiblast_iteration_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp -o psiblast_iteration_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie optionshandle_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lxobjsimple -lncbi_xloader_genbank -lxalgowinmask -lblast_services -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lseqset -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lblast -lxcompress -lxser -lsequtil -ltest_boost -lxconnect -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o optionshandle_unit_test strip optionshandle_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f optionshandle_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f optionshandle_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/optionshandle_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=psiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp -o psiblast_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie psiblast_iteration_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lxobjsimple -lncbi_xloader_genbank -lxalgowinmask -lblast_services -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lseqset -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lblast -lxcompress -lxser -lsequtil -ltest_boost -lxconnect -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o psiblast_iteration_unit_test strip psiblast_iteration_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_iteration_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f psiblast_iteration_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/psiblast_iteration_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=pssmcreate_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp -o pssmcreate_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie prelimsearch_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o prelimsearch_unit_test strip prelimsearch_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f prelimsearch_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f prelimsearch_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/prelimsearch_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=pssmenginefreqratios_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp -o pssmenginefreqratios_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie psibl2seq_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lxobjsimple -lncbi_xloader_genbank -lxalgowinmask -lblast_services -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lseqset -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lblast -lxcompress -lxser -lsequtil -ltest_boost -lxconnect -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o psibl2seq_unit_test strip psibl2seq_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f psibl2seq_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f psibl2seq_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/psibl2seq_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp -o pssm_test_util.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie pssmenginefreqratios_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o pssmenginefreqratios_unit_test strip pssmenginefreqratios_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmenginefreqratios_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f pssmenginefreqratios_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/pssmenginefreqratios_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=querydata_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp -o querydata_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie psiblast_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lncbi_xloader_blastdb_rmt -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o psiblast_unit_test strip psiblast_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f psiblast_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/psiblast_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=queryinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp -o queryinfo_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp -o pssmcreate_cdd_unit_test.o cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=redoalignment_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../core /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp: In static member function 'static void CQueryDataTestFixture::s_ObjMgrFree_QueryFactory_LocalDataFromBioseq(ncbi::TGi)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:495:47: warning: 'CObjMgrFree_QueryFactory' is deprecated [-Wdeprecated-declarations] CRef query_factory(new CObjMgrFree_QueryFactory(bs));/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:38:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/objmgrfree_query_data.hpp:51:42: note: declared here NCBI_DEPRECATED_CLASS NCBI_XBLAST_EXPORT CObjMgrFree_QueryFactory : ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp: In static member function 'static void CQueryDataTestFixture::s_ObjMgrFree_QueryFactory_LocalDataFromBioseq_set(const std::vector&)': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:509:47: warning: 'CObjMgrFree_QueryFactory' is deprecated [-Wdeprecated-declarations] CRef query_factory(new CObjMgrFree_QueryFactory(bs));/* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:38:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/objmgrfree_query_data.hpp:51:42: note: declared here NCBI_DEPRECATED_CLASS NCBI_XBLAST_EXPORT CObjMgrFree_QueryFactory : ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp: In member function 'void QueryData::ObjMgr_QueryFactory_LocalData_GetSumOfSequenceLengths::test_method()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:580:43: warning: 'CObjMgrFree_QueryFactory' is deprecated [-Wdeprecated-declarations] CRef query_factory(new CObjMgrFree_QueryFactory(bs)); /* NCBI_FAKE_WARNING */ ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp:38:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/objmgrfree_query_data.hpp:51:42: note: declared here NCBI_DEPRECATED_CLASS NCBI_XBLAST_EXPORT CObjMgrFree_QueryFactory : ^ /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie queryinfo_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o queryinfo_unit_test strip queryinfo_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f queryinfo_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f queryinfo_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/queryinfo_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=remote_blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp -o remote_blast_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie querydata_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o querydata_unit_test strip querydata_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f querydata_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f querydata_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/querydata_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=rps_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp -o rps_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie pssmcreate_unit_test.o pssm_test_util.o pssmcreate_cdd_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o pssmcreate_unit_test strip pssmcreate_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmcreate_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f pssmcreate_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/pssmcreate_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=scoreblk_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie redoalignment_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lncbi_xloader_blastdb_rmt -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o redoalignment_unit_test strip redoalignment_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f redoalignment_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f redoalignment_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/redoalignment_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=search_strategy_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp -o search_strategy_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie rps_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o rps_unit_test strip rps_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f rps_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f rps_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/rps_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=seqinfosrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp -o seqinfosrc_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie scoreblk_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o scoreblk_unit_test strip scoreblk_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f scoreblk_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f scoreblk_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/scoreblk_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=seqsrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp -o seqsrc_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie remote_blast_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o remote_blast_unit_test /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie seqinfosrc_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o seqinfosrc_unit_test /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie search_strategy_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o search_strategy_unit_test strip remote_blast_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f remote_blast_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f remote_blast_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/remote_blast_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=setupfactory_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp -o setupfactory_unit_test.o strip seqinfosrc_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqinfosrc_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f seqinfosrc_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/seqinfosrc_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=split_query_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' strip search_strategy_unit_test /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -w -j --jobserver-fds=3,4 all /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f search_strategy_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o /bin/ln -f search_strategy_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/search_strategy_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp -o seqsrc_mock.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp -o mockseqsrc1_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp -o mockseqsrc2_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie setupfactory_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o setupfactory_unit_test strip setupfactory_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f setupfactory_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f setupfactory_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/setupfactory_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=subj_ranges_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp -o subj_ranges_unit_test.o cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp -o traceback_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie seqsrc_unit_test.o seqsrc_mock.o mockseqsrc1_unit_test.o mockseqsrc2_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o seqsrc_unit_test strip seqsrc_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqsrc_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f seqsrc_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/seqsrc_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=tracebacksearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/tracebacksearch_unit_test.cpp -o tracebacksearch_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie subj_ranges_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lxobjsimple -lncbi_xloader_genbank -lxalgowinmask -lblast_services -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lseqset -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lblast -lxcompress -lxser -lsequtil -ltest_boost -lxconnect -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o subj_ranges_unit_test strip subj_ranges_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f subj_ranges_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f subj_ranges_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/subj_ranges_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=uniform_search_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/../../api /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp -o uniform_search_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie split_query_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o split_query_unit_test strip split_query_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f split_query_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f split_query_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/split_query_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=version_reference_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/version_reference_unit_test.cpp -o version_reference_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie version_reference_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lxobjsimple -lncbi_xloader_genbank -lxalgowinmask -lblast_services -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lseqset -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lblast -lxcompress -lxser -lsequtil -ltest_boost -lxconnect -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o version_reference_unit_test /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie tracebacksearch_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o tracebacksearch_unit_test strip version_reference_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f version_reference_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f version_reference_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/version_reference_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/blast_format' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/blast_format' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp -o seqalignfilter_unit_test.o strip tracebacksearch_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f tracebacksearch_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f tracebacksearch_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/tracebacksearch_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=bdbloader_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/blastdb' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs -I../ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp -o bdbloader_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie traceback_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o traceback_unit_test strip traceback_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f traceback_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f traceback_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/traceback_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blast_formatter LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast TMPL=blast_formatter -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/blast_formatter.cpp -o blast_formatter.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie uniform_search_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o uniform_search_unit_test strip uniform_search_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f uniform_search_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f uniform_search_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/uniform_search_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast TMPL=blastn -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/blastn_app.cpp -o blastn_app.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp -o blastfmtutil_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie bdbloader_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -ltest_boost -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o bdbloader_unit_test strip bdbloader_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f bdbloader_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f bdbloader_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/bdbloader_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp -o build_archive_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blast_formatter.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_app_util -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o blast_formatter strip blast_formatter /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_formatter /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blast_formatter /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blast_formatter make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast TMPL=blastp -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/blastp_app.cpp -o blastp_app.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp: In member function 'void blast_archive::BuildArchiveWithDB::test_method()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:79:43: warning: 'CObjMgrFree_QueryFactory' is deprecated [-Wdeprecated-declarations] CRef query_factory(new CObjMgrFree_QueryFactory(bss_ref)); ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:48:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/objmgrfree_query_data.hpp:51:42: note: declared here NCBI_DEPRECATED_CLASS NCBI_XBLAST_EXPORT CObjMgrFree_QueryFactory : ^ /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp: In member function 'void blast_archive::BuildArchiveWithBl2seq::test_method()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:118:43: warning: 'CObjMgrFree_QueryFactory' is deprecated [-Wdeprecated-declarations] CRef query_factory(new CObjMgrFree_QueryFactory(bss_ref)); ^ In file included from /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/blast_format/build_archive_unit_test.cpp:48:0: /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include/algo/blast/api/objmgrfree_query_data.hpp:51:42: note: declared here NCBI_DEPRECATED_CLASS NCBI_XBLAST_EXPORT CObjMgrFree_QueryFactory : ^ /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp -o vecscreen_run_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blastn_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_app_util -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o blastn strip blastn /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blastn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blastn make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast TMPL=blastx -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/blastx_app.cpp -o blastx_app.o cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=deltablast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast TMPL=deltablast -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/deltablast_app.cpp -o deltablast_app.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blastp_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_app_util -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o blastp strip blastp /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastp /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blastp /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blastp make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=psiblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast TMPL=psiblast -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie seqalignfilter_unit_test.o blastfmtutil_unit_test.o build_archive_unit_test.o vecscreen_run_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -ltest_boost -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o blast_format_unit_test strip blast_format_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_format_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blast_format_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blast_format_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/blast_format' cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=rpsblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast TMPL=rpsblast -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/rpsblast_app.cpp -o rpsblast_app.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blastx_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_app_util -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o blastx strip blastx /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastx /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blastx /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blastx make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=rpstblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast TMPL=rpstblastn -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/rpstblastn_app.cpp -o rpstblastn_app.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie deltablast_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_app_util -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o deltablast strip deltablast /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f deltablast /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f deltablast /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/deltablast make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=seedtop LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast TMPL=seedtop -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie rpsblast_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_app_util -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o rpsblast /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie psiblast_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_app_util -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o psiblast strip rpsblast /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpsblast /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f rpsblast /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/rpsblast make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=tblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast TMPL=tblastn -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o strip psiblast /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f psiblast /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/psiblast make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' cd app/blast/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=tblastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast TMPL=tblastx -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blast/tblastx_app.cpp -o tblastx_app.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie rpstblastn_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_app_util -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o rpstblastn strip rpstblastn /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpstblastn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f rpstblastn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/rpstblastn make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blastdb_aliastool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blastdb TMPL=blastdb_aliastool -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blastdb/blastdb_aliastool.cpp -o blastdb_aliastool.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie seedtop_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_app_util -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o seedtop strip seedtop /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f seedtop /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f seedtop /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/seedtop make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blastdbcheck LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blastdb TMPL=blastdbcheck -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blastdb/blastdbcheck.cpp -o blastdbcheck.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blastdb_aliastool.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lwritedb -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o blastdb_aliastool /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie tblastx_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_app_util -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o tblastx strip blastdb_aliastool /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_aliastool /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blastdb_aliastool /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blastdb_aliastool make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blastdbcmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blastdb TMPL=blastdbcmd -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blastdb/blastdbcmd.cpp -o blastdbcmd.o strip tblastx /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastx /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f tblastx /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/tblastx make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blastdbcp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blastdb TMPL=blastdbcp -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blastdb/blastdbcp.cpp -o blastdbcp.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie tblastn_app.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_app_util -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o tblastn strip tblastn /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f tblastn /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/tblastn make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=convert2blastmask LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blastdb TMPL=convert2blastmask -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blastdb/convert2blastmask.cpp -o convert2blastmask.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blastdbcp.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lwritedb -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o blastdbcp strip blastdbcp /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcp /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blastdbcp /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blastdbcp make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=makeblastdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blastdb TMPL=makeblastdb -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blastdb/makeblastdb.cpp -o makeblastdb.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blastdbcheck.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o blastdbcheck strip blastdbcheck /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcheck /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blastdbcheck /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blastdbcheck make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' cd app/blastdb/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=makeprofiledb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blastdb TMPL=makeprofiledb -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blastdb/makeprofiledb.cpp -o makeprofiledb.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blastdbcmd.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o blastdbcmd /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie convert2blastmask.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lncbi_xloader_genbank -lxalgowinmask -lblast_services -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lseqset -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lblast -lxcompress -lxser -lsequtil -lxconnect -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o convert2blastmask strip convert2blastmask /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f convert2blastmask /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f convert2blastmask /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/convert2blastmask make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/blastdb/masked_range_set.cpp -o masked_range_set.o strip blastdbcmd /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcmd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blastdbcmd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blastdbcmd make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' cd app/segmasker/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=segmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/segmasker' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/segmasker TMPL=segmasker -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/segmasker' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/app/segmasker/segmasker.cpp -o segmasker.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie segmasker.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lxblast -lxobjsimple -lncbi_xloader_genbank -lxalgowinmask -lblast_services -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lncbi_xreader -lseqdb -lxalgodustmask -lxalgosegmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lseqset -lvariation -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lblast -lxcompress -lxser -lsequtil -lxconnect -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lz -ldl -lm -lpthread -o segmasker /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie makeprofiledb.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lwritedb -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o makeprofiledb strip segmasker /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f segmasker /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f segmasker /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/segmasker make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/segmasker' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/segmasker' cd algo/blast/blastinput/unit_test/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blastinput_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=bl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/blastinput/unit_test' make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -w -j --jobserver-fds=3,4 all /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp -o blastinput_unit_test.o /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp -o bl2seq_unit_test.o strip makeprofiledb /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeprofiledb /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f makeprofiledb /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/makeprofiledb make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp -o blast_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie makeblastdb.o masked_range_set.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lwritedb -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lvalid -lblastxml -lblastxml2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o makeblastdb strip makeblastdb /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeblastdb /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f makeblastdb /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/makeblastdb make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp -o blast_scope_src_unit_test.o /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blast_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lncbi_xloader_blastdb_rmt -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o blast_unit_test strip blast_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blast_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blast_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' cd algo/blast/unit_tests/api/ && /usr/bin/make -w -j --jobserver-fds=3,4 --jobserver-fds=3,4 APP_PROJ=delta_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -w -j --jobserver-fds=3,4 all make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -c -Wall -Wno-format-y2k -pthread -fopenmp -O3 -fstack-protector-strong -Wformat -Werror=format-security -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/inc -I/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/include -Wno-unused-local-typedefs /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp -o delta_unit_test.o /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp: In member function 'void bl2seq::FullyMaskedSequence::test_method()': /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp:875:10: warning: unused variable 'caught_exception' [-Wunused-variable] bool caught_exception = false; ^ /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie delta_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o delta_unit_test strip delta_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f delta_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f delta_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/delta_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie bl2seq_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb -lncbi_xloader_blastdb_rmt -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lsubmit -lmlacli -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lncbi_xloader_blastdb_rmt -lxblast -lxalgoblastdbindex -lblast -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lcreaders -lsubmit -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lxalnmgr -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lxconnect -lncbi_xreader -lxconnect -lid1 -lid2 -lseqsplit -lxcompress -lxobjmgr -lgenome_collection -lseqedit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o bl2seq_unit_test strip bl2seq_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f bl2seq_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f bl2seq_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/bl2seq_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++11 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--as-needed -O -fPIE -pie blastinput_unit_test.o blast_scope_src_unit_test.o -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath-link,/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -L/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/lib -lblastinput -lxblastformat -lalign_format -lxblast -lncbi_xloader_blastdb_rmt -lncbi_xloader_genbank -lxalgowinmask -lxformat -lblast_services -lblastdb_format -lncbi_xloader_blastdb -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lseqmasks_io -lxalgoblastdbindex -lxalnmgr -lxcleanup -lncbi_xreader -lseqdb -lxalgodustmask -lxnetblastcli -lxobjutil -lid2 -lxnetblast -lxobjmgr -lxobjread -lid1 -lscoremat -lseqedit -lseqsplit -lsubmit -lblastdb -lgenome_collection -lmlacli -lseqset -ltaxon1 -lvariation -lmla -lseq -lpub -lpubmed -lmedlars -lmedline -lbiblio -lentrez2cli -lvalid -lblastxml -lblastxml2 -lentrez2 -lgbseq -lgeneral -lseqcode -lblast -lxcgi -lxcompress -lxser -lgene_info -lsequtil -ltest_boost -lxconnect -lxhtml -lxregexp -lxutil -lcomposition_adjustment -lcreaders -ltables -lxncbi -lbz2 -lnsl -lpcre -lz -ldl -lm -lpthread -o blastinput_unit_test strip blastinput_unit_test /bin/bash /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastinput_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin /bin/ln -f blastinput_unit_test /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/bin/blastinput_unit_test make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/blastinput/unit_test' make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/blastinput/unit_test' make[3]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build' make[2]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build' make[1]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31' debian/rules override_dh_auto_test make[1]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31' dh_auto_test /usr/bin/make -j1 check make[2]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++' if test -s ""; then \ cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build && /usr/bin/make -w check_p RUN_CHECK=Y; \ else \ cd /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build && /usr/bin/make -w check_r RUN_CHECK=Y; \ fi make[3]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build' ====================================================================== make[4]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build' /usr/bin/make -C corelib -w check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/corelib' /usr/bin/make -C util -w check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util' /usr/bin/make -C regexp -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/regexp' NOTE: Skipping project regexp due to unmet requirements: LocalPCRE make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/regexp' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/regexp TMPL=regexp -w mark-as-disabled make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/regexp' make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/regexp' make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/regexp' make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/regexp' /usr/bin/make -C xregexp -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/xregexp' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/xregexp' /usr/bin/make -C compress -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress' /usr/bin/make -C bzip2 -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/bzip2' NOTE: Skipping project bzip2 due to unmet requirements: LocalBZ2 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/bzip2' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/bzip2 TMPL=bzip2 -w mark-as-disabled make[9]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/bzip2' make[9]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/bzip2' make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/bzip2' make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/bzip2' /usr/bin/make -C zlib -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/zlib' NOTE: Skipping project zlib due to unmet requirements: LocalZ make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/zlib' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/util/compress/zlib TMPL=zlib -w mark-as-disabled make[9]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/zlib' make[9]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/zlib' make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/zlib' make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/zlib' /usr/bin/make -C api -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/api' make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress/api' make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/compress' /bin/echo 'Warning: non-existent sub-project "diff"' Warning: non-existent sub-project "diff" /bin/echo 'Warning: non-existent sub-project "image"' Warning: non-existent sub-project "image" /usr/bin/make -C tables -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/tables' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/tables' /usr/bin/make -C creaders -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/creaders' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/creaders' /usr/bin/make -C sequtil -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/sequtil' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/sequtil' /usr/bin/make -C bitset -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/bitset' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util/bitset' /bin/echo 'Warning: non-existent sub-project "qparse"' Warning: non-existent sub-project "qparse" /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/util' /usr/bin/make -C connect -w check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/connect' /usr/bin/make -C services -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/connect/services' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/connect/services' /bin/echo 'Warning: non-existent sub-project "ext"' Warning: non-existent sub-project "ext" /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "daemons"' Warning: non-existent sub-project "daemons" make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/connect' /usr/bin/make -C cgi -w check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/cgi' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/cgi' /usr/bin/make -C html -w check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/html' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/html' /usr/bin/make -C build-system -w check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/build-system' /usr/bin/make -C project_tree_builder -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/build-system/project_tree_builder' SKIP -- build-system/project_tree_builder/project_tree_builder /usr/bin/make -C msbuild -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/build-system/project_tree_builder/msbuild' NOTE: Skipping project msbuild due to unmet requirements: MSWin make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/build-system/project_tree_builder/msbuild' /usr/bin/make -f /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -w mark-as-disabled make[9]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[9]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/build-system/project_tree_builder' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/build-system' /usr/bin/make -C serial -w check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial' /usr/bin/make -C datatool -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial/datatool' TEST -- serial/datatool/datatool make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial/datatool' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "soap"' Warning: non-existent sub-project "soap" make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/serial' /bin/echo 'Warning: non-existent sub-project "db"' Warning: non-existent sub-project "db" /bin/echo 'Warning: non-existent sub-project "dbapi"' Warning: non-existent sub-project "dbapi" /usr/bin/make -C objects -w check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects' /usr/bin/make -C general -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/general' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/general' /usr/bin/make -C biblio -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/biblio' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/biblio' /usr/bin/make -C medline -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/medline' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/medline' /usr/bin/make -C pub -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pub' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pub' /usr/bin/make -C seqcode -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqcode' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqcode' /usr/bin/make -C seq -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seq' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seq' /usr/bin/make -C seqset -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqset' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqset' /usr/bin/make -C submit -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/submit' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/submit' /usr/bin/make -C seqedit -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqedit' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqedit' /usr/bin/make -C seqsplit -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqsplit' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqsplit' /usr/bin/make -C id1 -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/id1' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/id1' /usr/bin/make -C id2 -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/id2' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/id2' /usr/bin/make -C entrez2 -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/entrez2' /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/entrez2' /usr/bin/make -C pubmed -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pubmed' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pubmed' /usr/bin/make -C medlars -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/medlars' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/medlars' /usr/bin/make -C mla -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/mla' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/mla' /usr/bin/make -C proj -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/proj' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/proj' /usr/bin/make -C scoremat -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/scoremat' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/scoremat' /usr/bin/make -C blast -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blast' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blast' /usr/bin/make -C blastdb -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastdb' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastdb' /usr/bin/make -C blastxml -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastxml' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastxml' /usr/bin/make -C blastxml2 -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastxml2' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/blastxml2' /usr/bin/make -C mmdb -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/mmdb' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/mmdb' /usr/bin/make -C cn3d -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/cn3d' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/cn3d' /usr/bin/make -C cdd -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/cdd' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/cdd' /usr/bin/make -C ncbimime -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/ncbimime' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/ncbimime' /usr/bin/make -C pcsubstance -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pcsubstance' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pcsubstance' /usr/bin/make -C pcassay -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pcassay' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/pcassay' /usr/bin/make -C gbseq -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/gbseq' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/gbseq' /usr/bin/make -C insdseq -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/insdseq' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/insdseq' /usr/bin/make -C tinyseq -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/tinyseq' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/tinyseq' /usr/bin/make -C biotree -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/biotree' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/biotree' /usr/bin/make -C entrezgene -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/entrezgene' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/entrezgene' /usr/bin/make -C omssa -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/omssa' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/omssa' /usr/bin/make -C remap -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/remap' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/remap' /usr/bin/make -C seqtest -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqtest' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/seqtest' /usr/bin/make -C taxon1 -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/taxon1' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/taxon1' /usr/bin/make -C taxon3 -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/taxon3' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/taxon3' /usr/bin/make -C gbproj -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/gbproj' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/gbproj' /usr/bin/make -C trackmgr -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/trackmgr' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/trackmgr' /usr/bin/make -C valerr -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/valerr' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/valerr' /usr/bin/make -C valid -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/valid' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/valid' /usr/bin/make -C access -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/access' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/access' /usr/bin/make -C docsum -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/docsum' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/docsum' /usr/bin/make -C featdef -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/featdef' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/featdef' /usr/bin/make -C genomecoll -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/genomecoll' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/genomecoll' /usr/bin/make -C homologene -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/homologene' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/homologene' /usr/bin/make -C mim -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/mim' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/mim' /usr/bin/make -C objprt -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/objprt' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/objprt' /usr/bin/make -C variation -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/variation' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/variation' /usr/bin/make -C macro -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/macro' /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/macro' /usr/bin/make -C genesbyloc -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/genesbyloc' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/genesbyloc' /usr/bin/make -C coords -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/coords' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects/coords' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objects' /usr/bin/make -C objmgr -w check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /usr/bin/make -C util -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr/util' /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr/util' /usr/bin/make -C split -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr/split' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr/split' make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objmgr' /usr/bin/make -C objtools -w check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools' /bin/echo 'Warning: non-existent sub-project "unit_test_util"' Warning: non-existent sub-project "unit_test_util" /usr/bin/make -C readers -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/readers' /bin/echo 'Warning: non-existent sub-project "app"' Warning: non-existent sub-project "app" /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/readers' /usr/bin/make -C blast -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast' /usr/bin/make -C seqdb_reader -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader' /usr/bin/make -C demo -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader/demo' SKIP -- objtools/blast/seqdb_reader/demo/seqdb_demo make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader/demo' /usr/bin/make -C test -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader/test' TEST -- objtools/blast/seqdb_reader/test/seqdb_perf make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_reader' /usr/bin/make -C seqdb_writer -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_writer' /usr/bin/make -C unit_test -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' TEST -- objtools/blast/seqdb_writer/unit_test/writedb_unit_test make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/seqdb_writer' /usr/bin/make -C gene_info_reader -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader' /usr/bin/make -C demo -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader/demo' SKIP -- objtools/blast/gene_info_reader/demo/gene_info_reader make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader/demo' /usr/bin/make -C unit_test -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' TEST -- objtools/blast/gene_info_reader/unit_test/gene_info_unit_test make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/gene_info_reader' /bin/echo 'Warning: non-existent sub-project "gene_info_writer"' Warning: non-existent sub-project "gene_info_writer" /usr/bin/make -C services -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/services' /usr/bin/make -C unit_test -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/services/unit_test' SKIP -- objtools/blast/services/unit_test/blast_services_unit_test make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/services/unit_test' make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/services' /usr/bin/make -C blastdb_format -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/blastdb_format' /usr/bin/make -C unit_test -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' TEST -- objtools/blast/blastdb_format/unit_test/blastdb_format_unit_test make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast/blastdb_format' make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/blast' /bin/echo 'Warning: non-existent sub-project "lds"' Warning: non-existent sub-project "lds" /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" /usr/bin/make -C data_loaders -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders' /usr/bin/make -C genbank -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank' /usr/bin/make -C cache -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/cache' /bin/echo 'Warning: non-existent sub-project "pubseq"' Warning: non-existent sub-project "pubseq" /usr/bin/make -C id2 -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/id2' /usr/bin/make -C id1 -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/id1' /bin/echo 'Warning: non-existent sub-project "pubseq2"' Warning: non-existent sub-project "pubseq2" /usr/bin/make -C gicache -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/gicache' make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank/gicache' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/genbank' /bin/echo 'Warning: non-existent sub-project "lds"' Warning: non-existent sub-project "lds" /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" /usr/bin/make -C blastdb -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/blastdb' /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders/blastdb' /bin/echo 'Warning: non-existent sub-project "cdd"' Warning: non-existent sub-project "cdd" /bin/echo 'Warning: non-existent sub-project "trace"' Warning: non-existent sub-project "trace" /bin/echo 'Warning: non-existent sub-project "patcher"' Warning: non-existent sub-project "patcher" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/data_loaders' /usr/bin/make -C simple -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/simple' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/simple' /usr/bin/make -C alnmgr -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/alnmgr' /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/alnmgr' /bin/echo 'Warning: non-existent sub-project "cddalignview"' Warning: non-existent sub-project "cddalignview" /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "manip"' Warning: non-existent sub-project "manip" /usr/bin/make -C cleanup -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/cleanup' /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/cleanup' /usr/bin/make -C format -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/format' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/format' /usr/bin/make -C edit -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/edit' /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/edit' /bin/echo 'Warning: non-existent sub-project "validator"' Warning: non-existent sub-project "validator" /bin/echo 'Warning: non-existent sub-project "asniotest"' Warning: non-existent sub-project "asniotest" /bin/echo 'Warning: non-existent sub-project "align"' Warning: non-existent sub-project "align" /usr/bin/make -C seqmasks_io -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/seqmasks_io' /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/seqmasks_io' /bin/echo 'Warning: non-existent sub-project "eutils"' Warning: non-existent sub-project "eutils" /usr/bin/make -C align_format -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/align_format' /usr/bin/make -C unit_test -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/align_format/unit_test' TEST -- objtools/align_format/unit_test/align_format_unit_test make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/align_format/unit_test' make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools/align_format' /bin/echo 'Warning: non-existent sub-project "snputil"' Warning: non-existent sub-project "snputil" /bin/echo 'Warning: non-existent sub-project "uudutil"' Warning: non-existent sub-project "uudutil" /bin/echo 'Warning: non-existent sub-project "variation"' Warning: non-existent sub-project "variation" /bin/echo 'Warning: non-existent sub-project "writers"' Warning: non-existent sub-project "writers" make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/objtools' /bin/echo 'Warning: non-existent sub-project "ctools"' Warning: non-existent sub-project "ctools" /bin/echo 'Warning: non-existent sub-project "sra"' Warning: non-existent sub-project "sra" /usr/bin/make -C algo -w check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo' /usr/bin/make -C dustmask -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/dustmask' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/dustmask' /usr/bin/make -C winmask -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/winmask' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/winmask' /bin/echo 'Warning: non-existent sub-project "sequence"' Warning: non-existent sub-project "sequence" /usr/bin/make -C blast -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast' /usr/bin/make -C composition_adjustment -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/composition_adjustment' make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/composition_adjustment' /usr/bin/make -C core -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/core' make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/core' /usr/bin/make -C dbindex -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/dbindex' /usr/bin/make -C makeindex -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/dbindex/makeindex' SKIP -- algo/blast/dbindex/makeindex/makeindex make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/dbindex/makeindex' make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/dbindex' /bin/echo 'Warning: non-existent sub-project "dbindex_search"' Warning: non-existent sub-project "dbindex_search" /usr/bin/make -C api -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/api' make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/api' /usr/bin/make -C format -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/format' make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/format' /usr/bin/make -C blastinput -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/blastinput' /usr/bin/make -C unit_test -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/blastinput/unit_test' TEST -- algo/blast/blastinput/unit_test/blastinput_unit_test make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/blastinput/unit_test' /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/blastinput' /usr/bin/make -C igblast -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/igblast' make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/igblast' /bin/echo 'Warning: non-existent sub-project "gumbel_params"' Warning: non-existent sub-project "gumbel_params" /usr/bin/make -C unit_tests -w check_add_r || exit 5 make[7]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests' /usr/bin/make -C blast_format -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/blast_format' TEST -- algo/blast/unit_tests/blast_format/blast_format_unit_test make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/blast_format' /usr/bin/make -C blastdb -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/blastdb' TEST -- algo/blast/unit_tests/blastdb/bdbloader_unit_test make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/blastdb' /usr/bin/make -C seqdb_reader -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' TEST -- algo/blast/unit_tests/seqdb_reader/seqdb_unit_test make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' /usr/bin/make -C api -w check_add_r || exit 5 make[8]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' TEST -- algo/blast/unit_tests/api/blast_unit_test TEST -- algo/blast/unit_tests/api/aalookup_unit_test TEST -- algo/blast/unit_tests/api/seqsrc_unit_test TEST -- algo/blast/unit_tests/api/delta_unit_test TEST -- algo/blast/unit_tests/api/ntlookup_unit_test TEST -- algo/blast/unit_tests/api/seqinfosrc_unit_test TEST -- algo/blast/unit_tests/api/setupfactory_unit_test TEST -- algo/blast/unit_tests/api/search_strategy_unit_test TEST -- algo/blast/unit_tests/api/redoalignment_unit_test TEST -- algo/blast/unit_tests/api/queryinfo_unit_test TEST -- algo/blast/unit_tests/api/querydata_unit_test TEST -- algo/blast/unit_tests/api/pssmenginefreqratios_unit_test TEST -- algo/blast/unit_tests/api/blastsetup_unit_test TEST -- algo/blast/unit_tests/api/blastextend_unit_test TEST -- algo/blast/unit_tests/api/blastdiag_unit_test TEST -- algo/blast/unit_tests/api/pssmcreate_unit_test TEST -- algo/blast/unit_tests/api/psiblast_iteration_unit_test TEST -- algo/blast/unit_tests/api/hspfilter_besthit_unit_test TEST -- algo/blast/unit_tests/api/hspfilter_culling_unit_test TEST -- algo/blast/unit_tests/api/optionshandle_unit_test TEST -- algo/blast/unit_tests/api/msa2pssm_unit_test TEST -- algo/blast/unit_tests/api/tracebacksearch_unit_test TEST -- algo/blast/unit_tests/api/traceback_unit_test TEST -- algo/blast/unit_tests/api/psibl2seq_unit_test TEST -- algo/blast/unit_tests/api/psiblast_unit_test TEST -- algo/blast/unit_tests/api/prelimsearch_unit_test TEST -- algo/blast/unit_tests/api/phiblast_unit_test TEST -- algo/blast/unit_tests/api/split_query_unit_test TEST -- algo/blast/unit_tests/api/scoreblk_unit_test TEST -- algo/blast/unit_tests/api/hspstream_unit_test TEST -- algo/blast/unit_tests/api/rps_unit_test TEST -- algo/blast/unit_tests/api/gapinfo_unit_test TEST -- algo/blast/unit_tests/api/blasthits_unit_test TEST -- algo/blast/unit_tests/api/linkhsp_unit_test TEST -- algo/blast/unit_tests/api/blastengine_unit_test TEST -- algo/blast/unit_tests/api/subj_ranges_unit_test TEST -- algo/blast/unit_tests/api/version_reference_unit_test TEST -- algo/blast/unit_tests/api/ntscan_unit_test TEST -- algo/blast/unit_tests/api/aascan_unit_test TEST -- algo/blast/unit_tests/api/remote_blast_unit_test TEST -- algo/blast/unit_tests/api/uniform_search_unit_test TEST -- algo/blast/unit_tests/api/blastfilter_unit_test TEST -- algo/blast/unit_tests/api/blastoptions_unit_test TEST -- algo/blast/unit_tests/api/gencode_singleton_unit_test TEST -- algo/blast/unit_tests/api/bl2seq_unit_test make[8]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api' make[7]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests' make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast' /usr/bin/make -C segmask -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/segmask' make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/segmask' /bin/echo 'Warning: non-existent sub-project "align"' Warning: non-existent sub-project "align" /bin/echo 'Warning: non-existent sub-project "structure"' Warning: non-existent sub-project "structure" /bin/echo 'Warning: non-existent sub-project "ms"' Warning: non-existent sub-project "ms" /bin/echo 'Warning: non-existent sub-project "gnomon"' Warning: non-existent sub-project "gnomon" /bin/echo 'Warning: non-existent sub-project "tree"' Warning: non-existent sub-project "tree" /bin/echo 'Warning: non-existent sub-project "phy_tree"' Warning: non-existent sub-project "phy_tree" /bin/echo 'Warning: non-existent sub-project "seqqa"' Warning: non-existent sub-project "seqqa" /bin/echo 'Warning: non-existent sub-project "cobalt"' Warning: non-existent sub-project "cobalt" /bin/echo 'Warning: non-existent sub-project "text"' Warning: non-existent sub-project "text" /bin/echo 'Warning: non-existent sub-project "volume_merge"' Warning: non-existent sub-project "volume_merge" /bin/echo 'Warning: non-existent sub-project "primer"' Warning: non-existent sub-project "primer" /bin/echo 'Warning: non-existent sub-project "id_mapper"' Warning: non-existent sub-project "id_mapper" make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo' /bin/echo 'Warning: non-existent sub-project "misc"' Warning: non-existent sub-project "misc" /bin/echo 'Warning: non-existent sub-project "gui"' Warning: non-existent sub-project "gui" /usr/bin/make -C app -w check_add_r || exit 5 make[5]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app' /bin/echo 'Warning: non-existent sub-project "asn2asn"' Warning: non-existent sub-project "asn2asn" /bin/echo 'Warning: non-existent sub-project "asn2fasta"' Warning: non-existent sub-project "asn2fasta" /bin/echo 'Warning: non-existent sub-project "asn2flat"' Warning: non-existent sub-project "asn2flat" /bin/echo 'Warning: non-existent sub-project "asnval"' Warning: non-existent sub-project "asnval" /bin/echo 'Warning: non-existent sub-project "asn_cleanup"' Warning: non-existent sub-project "asn_cleanup" /bin/echo 'Warning: non-existent sub-project "id1_fetch"' Warning: non-existent sub-project "id1_fetch" /usr/bin/make -C blast -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' SKIP -- app/blast/blastp SKIP -- app/blast/blastn SKIP -- app/blast/blastx SKIP -- app/blast/tblastn SKIP -- app/blast/tblastx SKIP -- app/blast/psiblast SKIP -- app/blast/rpsblast SKIP -- app/blast/rpstblastn SKIP -- app/blast/blast_formatter SKIP -- app/blast/deltablast SKIP -- app/blast/seedtop make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blast' /bin/echo 'Warning: non-existent sub-project "convert_seq"' Warning: non-existent sub-project "convert_seq" /bin/echo 'Warning: non-existent sub-project "nmer_repeats"' Warning: non-existent sub-project "nmer_repeats" /bin/echo 'Warning: non-existent sub-project "objmgr"' Warning: non-existent sub-project "objmgr" /bin/echo 'Warning: non-existent sub-project "gi2taxid"' Warning: non-existent sub-project "gi2taxid" /bin/echo 'Warning: non-existent sub-project "netschedule"' Warning: non-existent sub-project "netschedule" /bin/echo 'Warning: non-existent sub-project "grid"' Warning: non-existent sub-project "grid" /bin/echo 'Warning: non-existent sub-project "netstorage"' Warning: non-existent sub-project "netstorage" /bin/echo 'Warning: non-existent sub-project "igblast"' Warning: non-existent sub-project "igblast" /usr/bin/make -C winmasker -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/winmasker' SKIP -- app/winmasker/winmasker make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/winmasker' /usr/bin/make -C dustmasker -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/dustmasker' SKIP -- app/dustmasker/dustmasker make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/dustmasker' /usr/bin/make -C segmasker -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/segmasker' SKIP -- app/segmasker/segmasker make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/segmasker' /usr/bin/make -C blastdb -w check_add_r || exit 5 make[6]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/blastdbcmd SKIP -- app/blastdb/makeblastdb SKIP -- app/blastdb/blastdb_aliastool SKIP -- app/blastdb/blastdbcheck SKIP -- app/blastdb/convert2blastmask SKIP -- app/blastdb/blastdbcp SKIP -- app/blastdb/makeprofiledb make[6]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app/blastdb' /bin/echo 'Warning: non-existent sub-project "vecscreen"' Warning: non-existent sub-project "vecscreen" /bin/echo 'Warning: non-existent sub-project "agpconvert"' Warning: non-existent sub-project "agpconvert" /bin/echo 'Warning: non-existent sub-project "id2_fetch"' Warning: non-existent sub-project "id2_fetch" /bin/echo 'Warning: non-existent sub-project "agp_validate"' Warning: non-existent sub-project "agp_validate" /bin/echo 'Warning: non-existent sub-project "objextract"' Warning: non-existent sub-project "objextract" /bin/echo 'Warning: non-existent sub-project "lds_indexer"' Warning: non-existent sub-project "lds_indexer" /bin/echo 'Warning: non-existent sub-project "bdb_env_keeper"' Warning: non-existent sub-project "bdb_env_keeper" /bin/echo 'Warning: non-existent sub-project "nw_aligner"' Warning: non-existent sub-project "nw_aligner" /bin/echo 'Warning: non-existent sub-project "speedtest"' Warning: non-existent sub-project "speedtest" /bin/echo 'Warning: non-existent sub-project "idmapper"' Warning: non-existent sub-project "idmapper" /bin/echo 'Warning: non-existent sub-project "formatguess"' Warning: non-existent sub-project "formatguess" /bin/echo 'Warning: non-existent sub-project "multireader"' Warning: non-existent sub-project "multireader" /bin/echo 'Warning: non-existent sub-project "read_blast_result"' Warning: non-existent sub-project "read_blast_result" /bin/echo 'Warning: non-existent sub-project "splign"' Warning: non-existent sub-project "splign" /bin/echo 'Warning: non-existent sub-project "hfilter"' Warning: non-existent sub-project "hfilter" /bin/echo 'Warning: non-existent sub-project "annotwriter"' Warning: non-existent sub-project "annotwriter" /bin/echo 'Warning: non-existent sub-project "compart"' Warning: non-existent sub-project "compart" /bin/echo 'Warning: non-existent sub-project "streamtest"' Warning: non-existent sub-project "streamtest" /bin/echo 'Warning: non-existent sub-project "lds2_indexer"' Warning: non-existent sub-project "lds2_indexer" /bin/echo 'Warning: non-existent sub-project "discrep_report"' Warning: non-existent sub-project "discrep_report" /bin/echo 'Warning: non-existent sub-project "discrepancy_report"' Warning: non-existent sub-project "discrepancy_report" /bin/echo 'Warning: non-existent sub-project "biosample_chk"' Warning: non-existent sub-project "biosample_chk" /bin/echo 'Warning: non-existent sub-project "gap_stats"' Warning: non-existent sub-project "gap_stats" /bin/echo 'Warning: non-existent sub-project "table2asn"' Warning: non-existent sub-project "table2asn" /bin/echo 'Warning: non-existent sub-project "srcchk"' Warning: non-existent sub-project "srcchk" /bin/echo 'Warning: non-existent sub-project "ncbi_encrypt"' Warning: non-existent sub-project "ncbi_encrypt" /bin/echo 'Warning: non-existent sub-project "split_cache"' Warning: non-existent sub-project "split_cache" /bin/echo 'Warning: non-existent sub-project "wig2table"' Warning: non-existent sub-project "wig2table" /bin/echo 'Warning: non-existent sub-project "netcache"' Warning: non-existent sub-project "netcache" /bin/echo 'Warning: non-existent sub-project "rmblastn"' Warning: non-existent sub-project "rmblastn" make[5]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/app' /bin/echo 'Warning: non-existent sub-project "sample"' Warning: non-existent sub-project "sample" /bin/echo 'Warning: non-existent sub-project "internal"' Warning: non-existent sub-project "internal" make[4]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build' ---------------------------------------------------------------------- Building check script... Done. OK -- [serial/datatool] datatool.sh (real 0.30, user 0.16, sys 0.01) SKP -- [serial/datatool] datatool_xml.sh OK -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.01, user 0.00, sys 0.00) OK -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.01, user 0.00, sys 0.00) ERR [201] -- [algo/blast/unit_tests/api] aascan_unit_test (real 33.17, user 0.06, sys 0.05) Succeeded : 3 Timeout : 0 Failed : 1 Absent : 1 make[3]: *** [check_r.real] Error 7 /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/build-system/Makefile.meta_r:46: recipe for target 'check_r.real' failed make[3]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build' make[2]: *** [check] Error 2 dh_auto_test: /usr/bin/make -j1 check returned exit code 2 Makefile:32: recipe for target 'check' failed make[2]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++' make[1]: [override_dh_auto_test] Error 2 (ignored) debian/rules:56: recipe for target 'override_dh_auto_test' failed c++/BUILD/build/check.sh concat_err cat c++/BUILD/build/check.sh.out_err ERR [201] -- [algo/blast/unit_tests/api] aascan_unit_test (real 33.17, user 0.06, sys 0.05) ====================================================================== aascan_unit_test ====================================================================== 13885/000/0000/PB 15A2363D66A0AA61 0001/0001 2015-12-10T23:28:38.160359 bos01-ppc64el-001 UNK_CLIENT UNK_SESSION aascan_unit_test start /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test Running 4 test cases... 13885/000/0000/PE 15A2363D66A0AA61 0002/0002 2015-12-10T23:28:38.163459 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test extra ncbi_phid=15A2363D66A0AA6100000000000027E7 13885/000/0000/PE 15A2363D66A0AA61 0003/0003 2015-12-10T23:28:38.167198 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#1000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0004/0004 2015-12-10T23:28:38.167228 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0005/0005 2015-12-10T23:28:38.167251 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0006/0006 2015-12-10T23:28:38.167270 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0008/0008 2015-12-10T23:28:38.170005 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#2000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0009/0009 2015-12-10T23:28:38.170025 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0010/0010 2015-12-10T23:28:38.170045 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0011/0011 2015-12-10T23:28:38.170062 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0013/0013 2015-12-10T23:28:39.173891 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#3000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0014/0014 2015-12-10T23:28:39.173957 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0015/0015 2015-12-10T23:28:39.173999 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0016/0016 2015-12-10T23:28:39.174032 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0018/0018 2015-12-10T23:28:41.679101 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#4000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0019/0019 2015-12-10T23:28:41.679141 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0020/0020 2015-12-10T23:28:41.679177 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0021/0021 2015-12-10T23:28:41.679206 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0023/0023 2015-12-10T23:28:46.434283 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#5000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0024/0024 2015-12-10T23:28:46.434342 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0025/0025 2015-12-10T23:28:46.434383 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0026/0026 2015-12-10T23:28:46.434416 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown unknown location(0): fatal error in "ScanOffsetTest": std::exception: NCBI C++ Exception: Error: ID2(CLoaderException::eConnectionFailed) "/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp", line 257: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2 Error: GENBANK(CLoaderException::eNoConnection) "/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/reader.cpp", line 186: ncbi::objects::CReader::OpenInitialConnection() --- cannot open initial 13885/000/0000/PE 15A2363D66A0AA61 0030/0030 2015-12-10T23:28:46.440200 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#6000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0031/0031 2015-12-10T23:28:46.440250 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0032/0032 2015-12-10T23:28:46.440288 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0033/0033 2015-12-10T23:28:46.440324 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0035/0035 2015-12-10T23:28:46.443656 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#7000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0036/0036 2015-12-10T23:28:46.443692 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0037/0037 2015-12-10T23:28:46.443728 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0038/0038 2015-12-10T23:28:46.443758 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0040/0040 2015-12-10T23:28:47.448211 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#8000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0041/0041 2015-12-10T23:28:47.448252 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0042/0042 2015-12-10T23:28:47.448288 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0043/0043 2015-12-10T23:28:47.448318 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0045/0045 2015-12-10T23:28:49.951988 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#9000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0046/0046 2015-12-10T23:28:49.952039 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0047/0047 2015-12-10T23:28:49.952075 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0048/0048 2015-12-10T23:28:49.952104 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0050/0050 2015-12-10T23:28:54.710847 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#10000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0051/0051 2015-12-10T23:28:54.712893 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0052/0052 2015-12-10T23:28:54.712946 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0053/0053 2015-12-10T23:28:54.712971 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown unknown location(0): fatal error in "ScanMaxHitsTest": std::exception: NCBI C++ Exception: Error: ID2(CLoaderException::eConnectionFailed) "/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp", line 257: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2 Error: GENBANK(CLoaderException::eNoConnection) "/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/reader.cpp", line 186: ncbi::objects::CReader::OpenInitialConnection() --- cannot open initial 13885/000/0000/PE 15A2363D66A0AA61 0057/0057 2015-12-10T23:28:54.717788 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#11000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0058/0058 2015-12-10T23:28:54.717813 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0059/0059 2015-12-10T23:28:54.717838 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0060/0060 2015-12-10T23:28:54.717858 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0062/0062 2015-12-10T23:28:54.720779 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#12000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0063/0063 2015-12-10T23:28:54.720803 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0064/0064 2015-12-10T23:28:54.720827 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0065/0065 2015-12-10T23:28:54.720847 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0067/0067 2015-12-10T23:28:55.726599 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#13000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0068/0068 2015-12-10T23:28:55.726672 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0069/0069 2015-12-10T23:28:55.726711 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0070/0070 2015-12-10T23:28:55.726743 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0072/0072 2015-12-10T23:28:58.233244 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#14000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0073/0073 2015-12-10T23:28:58.233304 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0074/0074 2015-12-10T23:28:58.233386 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0075/0075 2015-12-10T23:28:58.233417 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0077/0077 2015-12-10T23:29:02.989282 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#15000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0078/0078 2015-12-10T23:29:02.989340 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0079/0079 2015-12-10T23:29:02.989364 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0080/0080 2015-12-10T23:29:02.989382 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown unknown location(0): fatal error in "SkipMaskedRanges": std::exception: NCBI C++ Exception: Error: ID2(CLoaderException::eConnectionFailed) "/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp", line 257: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2 Error: GENBANK(CLoaderException::eNoConnection) "/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/reader.cpp", line 186: ncbi::objects::CReader::OpenInitialConnection() --- cannot open initial 13885/000/0000/PE 15A2363D66A0AA61 0084/0084 2015-12-10T23:29:02.993379 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#16000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0085/0085 2015-12-10T23:29:02.993402 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0086/0086 2015-12-10T23:29:02.993423 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0087/0087 2015-12-10T23:29:02.993440 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0089/0089 2015-12-10T23:29:02.995994 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#17000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0090/0090 2015-12-10T23:29:02.996013 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0091/0091 2015-12-10T23:29:02.996033 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0092/0092 2015-12-10T23:29:02.996050 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0094/0094 2015-12-10T23:29:04.000667 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#18000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0095/0095 2015-12-10T23:29:04.000735 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0096/0096 2015-12-10T23:29:04.000773 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0097/0097 2015-12-10T23:29:04.000803 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0099/0099 2015-12-10T23:29:06.505978 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#19000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0100/0100 2015-12-10T23:29:06.506099 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0101/0101 2015-12-10T23:29:06.506139 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0102/0102 2015-12-10T23:29:06.506171 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0104/0104 2015-12-10T23:29:11.263010 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(311.22) "ncbi_socket.c", line 4001: UNK_FUNC --- SOCK#20000[?]: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") 13885/000/0000/PE 15A2363D66A0AA61 0105/0105 2015-12-10T23:29:11.263188 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 1680: UNK_FUNC --- [URL_Connect; http//www.ncbi.nlm.nih.gov:80/Service/dispd.cgi?service=ID2&address=bos01-ppc64el-001.buildd(127.0.1.1)&platform=powerpc64le-unknown-linux-gnu] Failed to connect: Unknown 13885/000/0000/PE 15A2363D66A0AA61 0106/0106 2015-12-10T23:29:11.263230 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(310.5) "ncbi_service_connector.c", line 94: UNK_FUNC --- [ID2] Service not found 13885/000/0000/PE 15A2363D66A0AA61 0107/0107 2015-12-10T23:29:11.263262 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 84: ncbi::CConn_Streambuf::CConn_Streambuf() --- CConn_Streambuf::CConn_Streambuf(): NULL connector: Unknown unknown location(0): fatal error in "ScanCheckScores": std::exception: NCBI C++ Exception: Error: ID2(CLoaderException::eConnectionFailed) "/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp", line 257: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2 Error: GENBANK(CLoaderException::eNoConnection) "/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/c++/src/objtools/data_loaders/genbank/reader.cpp", line 186: ncbi::objects::CReader::OpenInitialConnection() --- cannot open initial Executed 4 test cases. *** 4 failures detected in test suite "Master Test Suite" 13885/000/0000/PE 15A2363D66A0AA61 0111/0111 2015-12-10T23:29:11.273839 bos01-ppc64el-001 UNK_CLIENT 15A2363D66A0AA61_0000SID aascan_unit_test stop 201 33.146212100 Command exited with non-zero status 201 real 33.17 user 0.06 sys 0.05 Start time : 12/10/2015 23:28:38 Stop time : 12/10/2015 23:29:11 Load averages: 1.04 2.77 2.01 @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ @@@ EXIT CODE: 201 make[1]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31' fakeroot debian/rules binary-arch dh binary-arch -Dc++ --with autotools_dev --with quilt dh_testroot -a -O-Dc\+\+ dh_prep -a -O-Dc\+\+ dh_installdirs -a -O-Dc\+\+ debian/rules override_dh_auto_install make[1]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31' cp c++/BUILD/lib/*.so debian/ncbi-blast+/usr/lib/ncbi-blast+/ cp c++/BUILD/bin/* debian/ncbi-blast+/usr/bin/ make[1]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31' debian/rules override_dh_install make[1]: Entering directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31' # dh_install mv debian/ncbi-blast+/usr/bin/rpsblast debian/ncbi-blast+/usr/bin/rpsblast+ mv debian/ncbi-blast+/usr/bin/seedtop debian/ncbi-blast+/usr/bin/seedtop+ mv debian/ncbi-blast+/usr/bin/legacy_blast.pl debian/ncbi-blast+/usr/bin/legacy_blast mv debian/ncbi-blast+/usr/bin/update_blastdb.pl debian/ncbi-blast+/usr/bin/update_blastdb mv debian/ncbi-blast+/usr/bin/windowmasker_2.2.22_adapter.py \ debian/ncbi-blast+/usr/bin/windowmasker_2.2.22_adapter rm -f debian/ncbi-blast+/usr/bin/*test* debian/ncbi-blast+/usr/bin/seqdb_demo \ debian/ncbi-blast+/usr/bin/datatool \ debian/ncbi-blast+/usr/bin/project_tree_builder \ debian/ncbi-blast+/usr/lib/ncbi-blast+/libtest_*.so if test -d debian/ncbi-blast+-legacy/usr/share/ncbi-blast+/bin; then cp debian/legacy/legacy.sh debian/ncbi-blast+-legacy/usr/share/ncbi-blast+/bin/; fi make[1]: Leaving directory '/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31' dh_installdocs -a -O-Dc\+\+ dh_installchangelogs -a -O-Dc\+\+ dh_installexamples -a -O-Dc\+\+ dh_installman -a -O-Dc\+\+ dh_installcatalogs -a -O-Dc\+\+ dh_installcron -a -O-Dc\+\+ dh_installdebconf -a -O-Dc\+\+ dh_installemacsen -a -O-Dc\+\+ dh_installifupdown -a -O-Dc\+\+ dh_installinfo -a -O-Dc\+\+ dh_installinit -a -O-Dc\+\+ dh_installmenu -a -O-Dc\+\+ dh_installmime -a -O-Dc\+\+ dh_installmodules -a -O-Dc\+\+ dh_installlogcheck -a -O-Dc\+\+ dh_installlogrotate -a -O-Dc\+\+ dh_installpam -a -O-Dc\+\+ dh_installppp -a -O-Dc\+\+ dh_installudev -a -O-Dc\+\+ dh_installgsettings -a -O-Dc\+\+ dh_bugfiles -a -O-Dc\+\+ dh_ucf -a -O-Dc\+\+ dh_lintian -a -O-Dc\+\+ dh_gconf -a -O-Dc\+\+ dh_icons -a -O-Dc\+\+ dh_perl -a -O-Dc\+\+ dh_usrlocal -a -O-Dc\+\+ dh_link -a -O-Dc\+\+ dh_installwm -a -O-Dc\+\+ dh_installxfonts -a -O-Dc\+\+ dh_strip_nondeterminism -a -O-Dc\+\+ dh_compress -a -O-Dc\+\+ dh_fixperms -a -O-Dc\+\+ dh_strip -a -O-Dc\+\+ dh_strip debug symbol extraction: enabling -a due to Build-Debug-Symbols: yes in /CurrentlyBuilding dh_strip debug symbol extraction: all non-arch-all packages for this build platform ppc64el: ncbi-blast+ dh_strip debug symbol extraction: packages to act on: ncbi-blast+ dh_strip debug symbol extraction: ignored packages: Using buildid for compat level >= 9 ncbi-blast+ has no unstripped objects, ignoring find: `/build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/debian/ncbi-blast+-dbgsym': No such file or directory /usr/bin/pkg_create_dbgsym: nothing in /build/ncbi-blast+-spxF_z/ncbi-blast+-2.2.31/debian/ncbi-blast+-dbgsym and no dbgdepends, ignoring dh_makeshlibs -a -O-Dc\+\+ dh_shlibdeps -a -O-Dc\+\+ dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ncbi-blast+/usr/bin/blast_formatter debian/ncbi-blast+/usr/bin/rpsblast+ debian/ncbi-blast+/usr/bin/deltablast debian/ncbi-blast+/usr/bin/blastp debian/ncbi-blast+/usr/bin/tblastn debian/ncbi-blast+/usr/bin/blastn debian/ncbi-blast+/usr/bin/psiblast debian/ncbi-blast+/usr/bin/blastx debian/ncbi-blast+/usr/bin/rpstblastn debian/ncbi-blast+/usr/bin/tblastx were not linked against libmlacli.so (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ncbi-blast+/usr/bin/blast_formatter debian/ncbi-blast+/usr/bin/rpsblast+ debian/ncbi-blast+/usr/bin/deltablast debian/ncbi-blast+/usr/bin/blastp debian/ncbi-blast+/usr/bin/tblastn debian/ncbi-blast+/usr/bin/blastn debian/ncbi-blast+/usr/bin/psiblast debian/ncbi-blast+/usr/bin/blastx debian/ncbi-blast+/usr/bin/rpstblastn debian/ncbi-blast+/usr/bin/tblastx were not linked against libpubmed.so (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ncbi-blast+/usr/bin/blast_formatter debian/ncbi-blast+/usr/bin/rpsblast+ debian/ncbi-blast+/usr/bin/deltablast debian/ncbi-blast+/usr/bin/blastp debian/ncbi-blast+/usr/bin/tblastn debian/ncbi-blast+/usr/bin/blastn debian/ncbi-blast+/usr/bin/psiblast debian/ncbi-blast+/usr/bin/blastx debian/ncbi-blast+/usr/bin/rpstblastn debian/ncbi-blast+/usr/bin/tblastx were not linked against libvalid.so (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ncbi-blast+/usr/bin/blast_formatter debian/ncbi-blast+/usr/bin/rpsblast+ debian/ncbi-blast+/usr/bin/deltablast debian/ncbi-blast+/usr/bin/blastp debian/ncbi-blast+/usr/bin/tblastn debian/ncbi-blast+/usr/bin/blastn debian/ncbi-blast+/usr/bin/psiblast debian/ncbi-blast+/usr/bin/blastx debian/ncbi-blast+/usr/bin/rpstblastn debian/ncbi-blast+/usr/bin/tblastx were not linked against libxformat.so (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ncbi-blast+/usr/bin/blast_formatter debian/ncbi-blast+/usr/bin/rpsblast+ debian/ncbi-blast+/usr/bin/deltablast debian/ncbi-blast+/usr/bin/blastp debian/ncbi-blast+/usr/bin/tblastn debian/ncbi-blast+/usr/bin/blastn debian/ncbi-blast+/usr/bin/psiblast debian/ncbi-blast+/usr/bin/blastx debian/ncbi-blast+/usr/bin/rpstblastn debian/ncbi-blast+/usr/bin/tblastx were not linked against libmedlars.so (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ncbi-blast+/usr/bin/blast_formatter debian/ncbi-blast+/usr/bin/rpsblast+ debian/ncbi-blast+/usr/bin/deltablast debian/ncbi-blast+/usr/bin/blastp debian/ncbi-blast+/usr/bin/tblastn debian/ncbi-blast+/usr/bin/blastn debian/ncbi-blast+/usr/bin/psiblast debian/ncbi-blast+/usr/bin/blastx debian/ncbi-blast+/usr/bin/rpstblastn debian/ncbi-blast+/usr/bin/tblastx were not linked against libgbseq.so (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ncbi-blast+/usr/bin/blast_formatter debian/ncbi-blast+/usr/bin/rpsblast+ debian/ncbi-blast+/usr/bin/deltablast debian/ncbi-blast+/usr/bin/blastp debian/ncbi-blast+/usr/bin/tblastn debian/ncbi-blast+/usr/bin/blastn debian/ncbi-blast+/usr/bin/psiblast debian/ncbi-blast+/usr/bin/blastx debian/ncbi-blast+/usr/bin/rpstblastn debian/ncbi-blast+/usr/bin/tblastx were not linked against libxcleanup.so (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/ncbi-blast+/usr/bin/blast_formatter debian/ncbi-blast+/usr/bin/rpsblast+ debian/ncbi-blast+/usr/bin/deltablast debian/ncbi-blast+/usr/bin/blastp debian/ncbi-blast+/usr/bin/tblastn debian/ncbi-blast+/usr/bin/blastn debian/ncbi-blast+/usr/bin/psiblast debian/ncbi-blast+/usr/bin/blastx debian/ncbi-blast+/usr/bin/rpstblastn debian/ncbi-blast+/usr/bin/tblastx were not linked against libmla.so (they use none of the library's symbols) dh_installdeb -a -O-Dc\+\+ dh_gencontrol -a -O-Dc\+\+ dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dh_gencontrol debug symbol wrapper: all non-arch-all packages for this build platform ppc64el: ncbi-blast+ dh_gencontrol debug symbol wrapper: packages to act on: ncbi-blast+ dh_gencontrol debug symbol wrapper: ignored packages: dh_gencontrol debug symbol wrapper: no debian/ncbi-blast+-dbgsym, skipping package ncbi-blast+ dh_md5sums -a -O-Dc\+\+ dh_builddeb -a -O-Dc\+\+ INFO: pkgstriptranslations version 125 pkgstriptranslations: processing ncbi-blast+ (in debian/ncbi-blast+); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/ncbi-blast+/DEBIAN/control, package ncbi-blast+, directory debian/ncbi-blast+ DEBUG: wait ncbi-blast+ 1:ncbi-blast+ DEBUG: clear ncbi-blast+ 1:ncbi-blast+ DEBUG: done ncbi-blast+ pkgstripfiles: Truncating usr/share/doc/ncbi-blast+/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package ncbi-blast+ ... pkgstripfiles: No PNG files. dpkg-deb: building package 'ncbi-blast+' in '../ncbi-blast+_2.2.31-1_ppc64el.deb'. dpkg-genchanges -B -mLaunchpad Build Daemon >../ncbi-blast+_2.2.31-1_ppc64el.changes dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build ncbi-blast+-2.2.31 dpkg-buildpackage: binary-only upload (no source included) ──────────────────────────────────────────────────────────────────────────────── Build finished at 20151210-2330 Finished ──────── I: Built successfully ┌──────────────────────────────────────────────────────────────────────────────┐ │ Post Build Chroot │ └──────────────────────────────────────────────────────────────────────────────┘ ┌──────────────────────────────────────────────────────────────────────────────┐ │ Changes │ └──────────────────────────────────────────────────────────────────────────────┘ ncbi-blast+_2.2.31-1_ppc64el.changes: ───────────────────────────────────── Format: 1.8 Date: Thu, 10 Dec 2015 13:37:03 +0100 Source: ncbi-blast+ Binary: ncbi-blast+ ncbi-blast+-legacy Architecture: ppc64el Version: 2.2.31-1 Distribution: xenial-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Olivier Sallou Description: ncbi-blast+ - next generation suite of BLAST sequence search tools ncbi-blast+-legacy - NCBI Blast legacy call script Closes: 793263 798277 Changes: ncbi-blast+ (2.2.31-1) unstable; urgency=medium . * New upstream release * Allow parallel build (Closes: #798277). Thanks to Aron Xu * GCC break fix (recompile with gcc5, Closes: #793263). Checksums-Sha1: 118c77f1885f6a836d7c829a6beed42ee641b734 9039472 ncbi-blast+_2.2.31-1_ppc64el.deb Checksums-Sha256: e8e139b8c9b82756b5809141c08df50657303746d2e43e1c72a7133806077dcd 9039472 ncbi-blast+_2.2.31-1_ppc64el.deb Files: a6aacbc1d283473e3f0128506186edc4 9039472 science optional ncbi-blast+_2.2.31-1_ppc64el.deb ┌──────────────────────────────────────────────────────────────────────────────┐ │ Package contents │ └──────────────────────────────────────────────────────────────────────────────┘ ncbi-blast+_2.2.31-1_ppc64el.deb ──────────────────────────────── new debian package, version 2.0. size 9039472 bytes: control archive=3884 bytes. 1287 bytes, 25 lines control 6930 bytes, 105 lines md5sums Package: ncbi-blast+ Version: 2.2.31-1 Architecture: ppc64el Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 47798 Depends: ncbi-data, python, perl, libbz2-1.0, libc6 (>= 2.17), libgcc1 (>= 1:3.4.4), libgomp1 (>= 4.9), libpcre3, libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.0) Enhances: t-coffee Section: science Priority: optional Multi-Arch: foreign Homepage: http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/ Description: next generation suite of BLAST sequence search tools The Basic Local Alignment Search Tool (BLAST) is the most widely used sequence similarity tool. There are versions of BLAST that compare protein queries to protein databases, nucleotide queries to nucleotide databases, as well as versions that translate nucleotide queries or databases in all six frames and compare to protein databases or queries. PSI-BLAST produces a position-specific-scoring-matrix (PSSM) starting with a protein query, and then uses that PSSM to perform further searches. It is also possible to compare a protein or nucleotide query to a database of PSSM’s. The NCBI supports a BLAST web page at blast.ncbi.nlm.nih.gov as well as a network service. drwxr-xr-x root/root 0 2015-12-10 23:29 ./ drwxr-xr-x root/root 0 2015-12-10 23:29 ./usr/ drwxr-xr-x root/root 0 2015-12-10 23:29 ./usr/bin/ -rwxr-xr-x root/root 264352 2015-12-10 23:29 ./usr/bin/blast_formatter -rwxr-xr-x root/root 133304 2015-12-10 23:29 ./usr/bin/blastdb_aliastool -rwxr-xr-x root/root 198800 2015-12-10 23:29 ./usr/bin/blastdbcheck -rwxr-xr-x root/root 133376 2015-12-10 23:29 ./usr/bin/blastdbcmd -rwxr-xr-x root/root 67664 2015-12-10 23:29 ./usr/bin/blastdbcp -rwxr-xr-x root/root 264344 2015-12-10 23:29 ./usr/bin/blastn -rwxr-xr-x root/root 264344 2015-12-10 23:29 ./usr/bin/blastp -rwxr-xr-x root/root 264344 2015-12-10 23:29 ./usr/bin/blastx -rwxr-xr-x root/root 133168 2015-12-10 23:29 ./usr/bin/convert2blastmask -rwxr-xr-x root/root 264344 2015-12-10 23:29 ./usr/bin/deltablast -rwxr-xr-x root/root 67616 2015-12-10 23:29 ./usr/bin/dustmasker -rwxr-xr-x root/root 67624 2015-12-10 23:29 ./usr/bin/gene_info_reader -rwxr-xr-x root/root 51346 2015-12-10 23:29 ./usr/bin/legacy_blast -rwxr-xr-x root/root 264344 2015-12-10 23:29 ./usr/bin/makeblastdb -rwxr-xr-x root/root 67616 2015-12-10 23:29 ./usr/bin/makembindex -rwxr-xr-x root/root 198792 2015-12-10 23:29 ./usr/bin/makeprofiledb -rwxr-xr-x root/root 264344 2015-12-10 23:29 ./usr/bin/psiblast -rwxr-xr-x root/root 264344 2015-12-10 23:29 ./usr/bin/rpsblast+ -rwxr-xr-x root/root 264344 2015-12-10 23:29 ./usr/bin/rpstblastn -rwxr-xr-x root/root 264344 2015-12-10 23:29 ./usr/bin/seedtop+ -rwxr-xr-x root/root 67624 2015-12-10 23:29 ./usr/bin/segmasker -rwxr-xr-x root/root 67632 2015-12-10 23:29 ./usr/bin/seqdb_perf -rwxr-xr-x root/root 264344 2015-12-10 23:29 ./usr/bin/tblastn -rwxr-xr-x root/root 264344 2015-12-10 23:29 ./usr/bin/tblastx -rwxr-xr-x root/root 12486 2015-12-10 23:29 ./usr/bin/update_blastdb -rwxr-xr-x root/root 67616 2015-12-10 23:29 ./usr/bin/windowmasker -rwxr-xr-x root/root 5950 2015-12-10 23:29 ./usr/bin/windowmasker_2.2.22_adapter drwxr-xr-x root/root 0 2015-12-10 23:29 ./usr/lib/ drwxr-xr-x root/root 0 2015-12-10 23:29 ./usr/lib/ncbi-blast+/ -rw-r--r-- root/root 984976 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libalign_format.so -rw-r--r-- root/root 395160 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libbiblio.so -rw-r--r-- root/root 746328 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libblast.so -rw-r--r-- root/root 133016 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libblast_services.so -rw-r--r-- root/root 133000 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libblastdb.so -rw-r--r-- root/root 133008 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libblastdb_format.so -rw-r--r-- root/root 722976 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libblastinput.so -rw-r--r-- root/root 133000 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libblastxml.so -rw-r--r-- root/root 198536 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libblastxml2.so -rw-r--r-- root/root 133016 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libcomposition_adjustment.so -rw-r--r-- root/root 460616 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libconnect.so -rw-r--r-- root/root 132752 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libcreaders.so -rw-r--r-- root/root 329616 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libentrez2.so -rw-r--r-- root/root 133008 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libentrez2cli.so -rw-r--r-- root/root 264072 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libgbseq.so -rw-r--r-- root/root 132992 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libgene_info.so -rw-r--r-- root/root 461056 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libgeneral.so -rw-r--r-- root/root 460680 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libgenome_collection.so -rw-r--r-- root/root 133000 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libid1.so -rw-r--r-- root/root 329608 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libid2.so -rw-r--r-- root/root 526224 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libid2_split.so -rw-r--r-- root/root 132992 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libigblast.so -rw-r--r-- root/root 67464 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libmedlars.so -rw-r--r-- root/root 133000 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libmedline.so -rw-r--r-- root/root 133000 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libmla.so -rw-r--r-- root/root 67472 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libmlacli.so -rw-r--r-- root/root 198592 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libncbi_xloader_blastdb.so -rw-r--r-- root/root 198544 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libncbi_xloader_blastdb_rmt.so -rw-r--r-- root/root 264368 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libncbi_xloader_genbank.so -rw-r--r-- root/root 986528 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libncbi_xreader.so -rw-r--r-- root/root 264216 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libncbi_xreader_cache.so -rw-r--r-- root/root 198968 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libncbi_xreader_id1.so -rw-r--r-- root/root 133472 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libncbi_xreader_id2.so -rw-r--r-- root/root 198536 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libpub.so -rw-r--r-- root/root 67464 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libpubmed.so -rw-r--r-- root/root 198536 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libscoremat.so -rw-r--r-- root/root 6632488 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libseq.so -rw-r--r-- root/root 133000 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libseqcode.so -rw-r--r-- root/root 919600 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libseqdb.so -rw-r--r-- root/root 329608 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libseqedit.so -rw-r--r-- root/root 67536 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libseqmasks_io.so -rw-r--r-- root/root 198544 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libseqset.so -rw-r--r-- root/root 395144 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libseqsplit.so -rw-r--r-- root/root 133096 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libsequtil.so -rw-r--r-- root/root 133000 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libsubmit.so -rw-r--r-- root/root 67288 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libtables.so -rw-r--r-- root/root 329976 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libtaxon1.so -rw-r--r-- root/root 198536 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libvalerr.so -rw-r--r-- root/root 264128 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libvalid.so -rw-r--r-- root/root 264072 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libvariation.so -rw-r--r-- root/root 460712 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libwritedb.so -rw-r--r-- root/root 329608 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libxalgoblastdbindex.so -rw-r--r-- root/root 67384 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libxalgodustmask.so -rw-r--r-- root/root 67384 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libxalgosegmask.so -rw-r--r-- root/root 395168 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libxalgowinmask.so -rw-r--r-- root/root 919664 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libxalnmgr.so -rw-r--r-- root/root 1968272 2015-12-10 23:29 ./usr/lib/ncbi-blast+/libxblast.so -rw-r--r-- root/root 526232 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┌──────────────────────────────────────────────────────────────────────────────┐ │ Post Build │ └──────────────────────────────────────────────────────────────────────────────┘ ┌──────────────────────────────────────────────────────────────────────────────┐ │ Cleanup │ └──────────────────────────────────────────────────────────────────────────────┘ Not removing build depends: as requested Keeping session: ┌──────────────────────────────────────────────────────────────────────────────┐ │ Summary │ └──────────────────────────────────────────────────────────────────────────────┘ Build Architecture: ppc64el Build-Space: 384456 Build-Time: 1111 Distribution: xenial-proposed Host Architecture: ppc64el Install-Time: 13 Job: ncbi-blast+_2.2.31-1.dsc Machine Architecture: ppc64el Package: ncbi-blast+ Package-Time: 1127 Source-Version: 2.2.31-1 Space: 384456 Status: successful Version: 2.2.31-1 ──────────────────────────────────────────────────────────────────────────────── Finished at 20151210-2330 Build needed 00:18:47, 384456k disc space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-8424439'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-8424439/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-8424439'] Unmounting chroot for build PACKAGEBUILD-8424439... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-8424439'] Removing build PACKAGEBUILD-8424439