mira 4.9.6-4build1 source package in Ubuntu
Changelog
mira (4.9.6-4build1) eoan; urgency=medium * No change rebuild against new boost regex icu encoded abi ABI -- Dimitri John Ledkov <email address hidden> Wed, 08 May 2019 18:05:26 +0100
Upload details
- Uploaded by:
- Dimitri John Ledkov
- Uploaded to:
- Eoan
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- science
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| mira_4.9.6.orig.tar.bz2 | 14.3 MiB | e910479bc5f3f205913ac81cd2a24449cc175a6d1ae1fe3ae33ea0e100435b16 |
| mira_4.9.6-4build1.debian.tar.xz | 32.2 KiB | 7381bc7cfc814c2001d2231ee45127c43d304f941c29a20108fb47112143ea74 |
| mira_4.9.6-4build1.dsc | 2.5 KiB | 677563a4aadbee8f14165374712c761895c270971e6495b775d4bdc60567568e |
Available diffs
- diff from 4.9.6-4 (in Debian) to 4.9.6-4build1 (327 bytes)
Binary packages built by this source
- mira-assembler: Whole Genome Shotgun and EST Sequence Assembler
The mira genome fragment assembler is a specialised assembler for
sequencing projects classified as 'hard' due to high number of similar
repeats. For expressed sequence tags (ESTs) transcripts, miraEST is
specialised on reconstructing pristine mRNA transcripts while
detecting and classifying single nucleotide polymorphisms (SNP)
occurring in different variations thereof.
.
The assembler is routinely used for such various tasks as mutation
detection in different cell types, similarity analysis of transcripts
between organisms, and pristine assembly of sequences from various
sources for oligo design in clinical microarray experiments.
.
The package provides the following executables:
Binaries provided:
* mira: for assembly of genome sequences
* miramem: estimating memory needed to assemble projects.
* mirabait: a "grep" like tool to select reads with kmers up to 256 bases.
* miraconvert: is a tool to convert, extract and sometimes recalculate all
kinds of data related to sequence assembly files.
- mira-assembler-dbgsym: No summary available for mira-assembler-dbgsym in ubuntu eoan.
No description available for mira-assembler-
dbgsym in ubuntu eoan.
- mira-doc: No summary available for mira-doc in ubuntu eoan.
No description available for mira-doc in ubuntu eoan.
- mira-rfam-12s-rrna: extract of RFAM 12 rRNA database
The mira genome fragment assembler is a specialised assembler for
sequencing projects classified as 'hard' due to high number of similar
repeats.
.
This package contains data to enable MIRA and MIRABAIT to search for rRNA and
rDNA. This data set contains an excerpt of the RFAM database.
