https://launchpad.net/ubuntu/+source/macs/2.2.7.1-3/+build/19595984 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux lcy01-amd64-017 4.4.0-185-generic #215-Ubuntu SMP Mon Jun 8 21:53:19 UTC 2020 x86_64 Buildd toolchain package versions: launchpad-buildd_189 python-lpbuildd_189 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.9 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 16 Jul 05:13:22 ntpdate[1889]: adjust time server 10.211.37.1 offset -0.000356 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=groovy --arch=amd64 PACKAGEBUILD-19595984 --image-type chroot /home/buildd/filecache-default/7f6882774d93a6ce12d34cd2f4e4b83a707bcc6e Creating target for build PACKAGEBUILD-19595984 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=groovy --arch=amd64 PACKAGEBUILD-19595984 Starting target for build PACKAGEBUILD-19595984 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=groovy --arch=amd64 PACKAGEBUILD-19595984 'deb http://ftpmaster.internal/ubuntu groovy main universe' 'deb http://ftpmaster.internal/ubuntu groovy-security main universe' 'deb http://ftpmaster.internal/ubuntu groovy-updates main universe' 'deb http://ftpmaster.internal/ubuntu groovy-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-19595984 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=groovy --arch=amd64 PACKAGEBUILD-19595984 Updating target for build PACKAGEBUILD-19595984 Get:1 http://ftpmaster.internal/ubuntu groovy InRelease [267 kB] Get:2 http://ftpmaster.internal/ubuntu groovy-security InRelease [89.1 kB] Get:3 http://ftpmaster.internal/ubuntu groovy-updates InRelease [89.1 kB] Get:4 http://ftpmaster.internal/ubuntu groovy-proposed InRelease [118 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main amd64 Packages [977 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main Translation-en [511 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/universe amd64 Packages [8751 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/universe Translation-en [5204 kB] Get:9 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 Packages [97.7 kB] Get:10 http://ftpmaster.internal/ubuntu groovy-proposed/main Translation-en [41.2 kB] Get:11 http://ftpmaster.internal/ubuntu groovy-proposed/universe amd64 Packages [790 kB] Get:12 http://ftpmaster.internal/ubuntu groovy-proposed/universe Translation-en [342 kB] Fetched 17.3 MB in 2s (7029 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libhogweed5 libnettle7 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libhogweed6 libnettle8 The following packages will be upgraded: apt base-files bash binutils binutils-common binutils-x86-64-linux-gnu bsdutils build-essential bzip2 ca-certificates coreutils cpp-9 dash debconf debianutils diffutils dpkg dpkg-dev e2fsprogs fdisk g++-9 gcc-10-base gcc-9 gcc-9-base gpg gpg-agent gpgconf gpgv gzip init init-system-helpers libacl1 libapparmor1 libapt-pkg6.0 libargon2-1 libasan5 libassuan0 libatomic1 libbinutils libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdebconfclient0 libdevmapper1.02.1 libdpkg-perl libext2fs2 libfdisk1 libgcc-9-dev libgcc-s1 libgcrypt20 libgmp10 libgnutls30 libgomp1 libgpg-error0 libidn2-0 libitm1 libjson-c4 libkmod2 liblsan0 liblzma5 libmount1 libmpfr6 libncurses6 libncursesw6 libnpth0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre3 libperl5.30 libprocps8 libquadmath0 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsepol1 libsmartcols1 libsqlite3-0 libss2 libssl1.1 libstdc++-9-dev libstdc++6 libsystemd0 libtinfo6 libtsan0 libubsan1 libudev1 libunistring2 libuuid1 libzstd1 linux-libc-dev login logsave make mount ncurses-base ncurses-bin openssl passwd perl perl-base perl-modules-5.30 pinentry-curses pkgbinarymangler procps sed systemd systemd-sysv systemd-timesyncd sysvinit-utils tzdata ubuntu-keyring util-linux xz-utils 128 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 73.8 MB of archives. After this operation, 4124 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu groovy/main amd64 libcrypt-dev amd64 1:4.4.16-1ubuntu1 [104 kB] Get:2 http://ftpmaster.internal/ubuntu groovy/main amd64 libc6-dev amd64 2.31-0ubuntu10 [2519 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main amd64 libc-dev-bin amd64 2.31-0ubuntu10 [71.6 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/main amd64 libcrypt1 amd64 1:4.4.16-1ubuntu1 [78.2 kB] Get:5 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 linux-libc-dev amd64 5.4.0-40.44 [1109 kB] Get:6 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libatomic1 amd64 10.1.0-6ubuntu1 [9276 B] Get:7 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libubsan1 amd64 10.1.0-6ubuntu1 [136 kB] Get:8 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libtsan0 amd64 10.1.0-6ubuntu1 [319 kB] Get:9 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libquadmath0 amd64 10.1.0-6ubuntu1 [146 kB] Get:10 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 liblsan0 amd64 10.1.0-6ubuntu1 [144 kB] Get:11 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libitm1 amd64 10.1.0-6ubuntu1 [26.4 kB] Get:12 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libgomp1 amd64 10.1.0-6ubuntu1 [101 kB] Get:13 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 gcc-10-base amd64 10.1.0-6ubuntu1 [19.6 kB] Get:14 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libgcc-s1 amd64 10.1.0-6ubuntu1 [41.5 kB] Get:15 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libcc1-0 amd64 10.1.0-6ubuntu1 [41.3 kB] Get:16 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libstdc++6 amd64 10.1.0-6ubuntu1 [503 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main amd64 libc6 amd64 2.31-0ubuntu10 [2714 kB] Get:18 http://ftpmaster.internal/ubuntu groovy/main amd64 base-files amd64 11ubuntu9 [60.2 kB] Get:19 http://ftpmaster.internal/ubuntu groovy/main amd64 debianutils amd64 4.11 [85.6 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main amd64 bash amd64 5.0-6ubuntu2 [638 kB] Get:21 http://ftpmaster.internal/ubuntu groovy/main amd64 bsdutils amd64 1:2.35.2-7ubuntu3 [86.6 kB] Get:22 http://ftpmaster.internal/ubuntu groovy/main amd64 coreutils amd64 8.30-3ubuntu3 [1244 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main amd64 dpkg amd64 1.19.7ubuntu4 [1128 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main amd64 perl-modules-5.30 all 5.30.3-4 [2740 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main amd64 libperl5.30 amd64 5.30.3-4 [3950 kB] Get:26 http://ftpmaster.internal/ubuntu groovy/main amd64 perl amd64 5.30.3-4 [223 kB] Get:27 http://ftpmaster.internal/ubuntu groovy/main amd64 perl-base amd64 5.30.3-4 [1513 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main amd64 bzip2 amd64 1.0.8-3ubuntu1 [33.3 kB] Get:29 http://ftpmaster.internal/ubuntu groovy/main amd64 libbz2-1.0 amd64 1.0.8-3ubuntu1 [32.1 kB] Get:30 http://ftpmaster.internal/ubuntu groovy/main amd64 debconf all 1.5.74 [121 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main amd64 dash amd64 0.5.10.2-7 [86.3 kB] Get:32 http://ftpmaster.internal/ubuntu groovy/main amd64 diffutils amd64 1:3.7-3build1 [198 kB] Get:33 http://ftpmaster.internal/ubuntu groovy/main amd64 gzip amd64 1.10-2ubuntu1 [95.0 kB] Get:34 http://ftpmaster.internal/ubuntu groovy/main amd64 login amd64 1:4.8.1-1ubuntu6 [221 kB] Get:35 http://ftpmaster.internal/ubuntu groovy/main amd64 ncurses-bin amd64 6.2-1 [172 kB] Get:36 http://ftpmaster.internal/ubuntu groovy/main amd64 sed amd64 4.7-1build1 [189 kB] Get:37 http://ftpmaster.internal/ubuntu groovy/main amd64 libblkid1 amd64 2.35.2-7ubuntu3 [132 kB] Get:38 http://ftpmaster.internal/ubuntu groovy/main amd64 libuuid1 amd64 2.35.2-7ubuntu3 [21.9 kB] Get:39 http://ftpmaster.internal/ubuntu groovy/main amd64 libfdisk1 amd64 2.35.2-7ubuntu3 [171 kB] Get:40 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libselinux1 amd64 3.1-1 [69.4 kB] Get:41 http://ftpmaster.internal/ubuntu groovy/main amd64 libmount1 amd64 2.35.2-7ubuntu3 [146 kB] Get:42 http://ftpmaster.internal/ubuntu groovy/main amd64 libncurses6 amd64 6.2-1 [101 kB] Get:43 http://ftpmaster.internal/ubuntu groovy/main amd64 libncursesw6 amd64 6.2-1 [132 kB] Get:44 http://ftpmaster.internal/ubuntu groovy/main amd64 libtinfo6 amd64 6.2-1 [87.1 kB] Get:45 http://ftpmaster.internal/ubuntu groovy/main amd64 libsmartcols1 amd64 2.35.2-7ubuntu3 [95.7 kB] Get:46 http://ftpmaster.internal/ubuntu groovy/main amd64 fdisk amd64 2.35.2-7ubuntu3 [124 kB] Get:47 http://ftpmaster.internal/ubuntu groovy/main amd64 util-linux amd64 2.35.2-7ubuntu3 [1048 kB] Get:48 http://ftpmaster.internal/ubuntu groovy/main amd64 init-system-helpers all 1.58 [38.4 kB] Get:49 http://ftpmaster.internal/ubuntu groovy/main amd64 libc-bin amd64 2.31-0ubuntu10 [634 kB] Get:50 http://ftpmaster.internal/ubuntu groovy/main amd64 ncurses-base all 6.2-1 [18.7 kB] Get:51 http://ftpmaster.internal/ubuntu groovy/main amd64 sysvinit-utils amd64 2.96-3ubuntu1 [20.6 kB] Get:52 http://ftpmaster.internal/ubuntu groovy/main amd64 libgpg-error0 amd64 1.38-2 [63.0 kB] Get:53 http://ftpmaster.internal/ubuntu groovy/main amd64 libgcrypt20 amd64 1.8.5-5ubuntu2 [419 kB] Get:54 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 liblzma5 amd64 5.2.4-1ubuntu1 [91.7 kB] Get:55 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 systemd-sysv amd64 245.6-3ubuntu2 [10.3 kB] Get:56 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 systemd-timesyncd amd64 245.6-3ubuntu2 [28.1 kB] Get:57 http://ftpmaster.internal/ubuntu groovy/main amd64 libacl1 amd64 2.2.53-8 [18.9 kB] Get:58 http://ftpmaster.internal/ubuntu groovy/main amd64 libapparmor1 amd64 2.13.3-7ubuntu6 [34.3 kB] Get:59 http://ftpmaster.internal/ubuntu groovy/main amd64 libcap2 amd64 1:2.36-1 [17.3 kB] Get:60 http://ftpmaster.internal/ubuntu groovy/main amd64 libargon2-1 amd64 0~20171227-0.2build20.10.0 [19.4 kB] Get:61 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libudev1 amd64 245.6-3ubuntu2 [75.2 kB] Get:62 http://ftpmaster.internal/ubuntu groovy/main amd64 libdevmapper1.02.1 amd64 2:1.02.167-1ubuntu3 [127 kB] Get:63 http://ftpmaster.internal/ubuntu groovy/main amd64 libjson-c4 amd64 0.13.1+dfsg-9 [29.2 kB] Get:64 http://ftpmaster.internal/ubuntu groovy/main amd64 libssl1.1 amd64 1.1.1f-1ubuntu3 [1318 kB] Get:65 http://ftpmaster.internal/ubuntu groovy/main amd64 libcryptsetup12 amd64 2:2.3.3-1ubuntu3 [193 kB] Get:66 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libnettle8 amd64 3.6-2 [123 kB] Get:67 http://ftpmaster.internal/ubuntu groovy/main amd64 libgmp10 amd64 2:6.2.0+dfsg-6 [240 kB] Get:68 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libhogweed6 amd64 3.6-2 [195 kB] Get:69 http://ftpmaster.internal/ubuntu groovy/main amd64 libunistring2 amd64 0.9.10-4 [368 kB] Get:70 http://ftpmaster.internal/ubuntu groovy/main amd64 libidn2-0 amd64 2.3.0-1 [52.6 kB] Get:71 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libgnutls30 amd64 3.6.13-4ubuntu4 [765 kB] Get:72 http://ftpmaster.internal/ubuntu groovy/main amd64 libkmod2 amd64 27+20200310-2ubuntu1 [44.1 kB] Get:73 http://ftpmaster.internal/ubuntu groovy/main amd64 libpam0g amd64 1.3.1-5ubuntu5 [55.4 kB] Get:74 http://ftpmaster.internal/ubuntu groovy/main amd64 libseccomp2 amd64 2.4.3-1ubuntu4 [41.8 kB] Get:75 http://ftpmaster.internal/ubuntu groovy/main amd64 mount amd64 2.35.2-7ubuntu3 [118 kB] Get:76 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 systemd amd64 245.6-3ubuntu2 [3813 kB] Get:77 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libsystemd0 amd64 245.6-3ubuntu2 [268 kB] Get:78 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libzstd1 amd64 1.4.5+dfsg-3 [309 kB] Get:79 http://ftpmaster.internal/ubuntu groovy/main amd64 libapt-pkg6.0 amd64 2.1.7 [846 kB] Get:80 http://ftpmaster.internal/ubuntu groovy/main amd64 gpgv amd64 2.2.20-1ubuntu1 [200 kB] Get:81 http://ftpmaster.internal/ubuntu groovy/main amd64 ubuntu-keyring all 2020.06.17.1 [22.2 kB] Get:82 http://ftpmaster.internal/ubuntu groovy/main amd64 apt amd64 2.1.7 [1289 kB] Get:83 http://ftpmaster.internal/ubuntu groovy/main amd64 libpam-modules-bin amd64 1.3.1-5ubuntu5 [37.7 kB] Get:84 http://ftpmaster.internal/ubuntu groovy/main amd64 libpam-modules amd64 1.3.1-5ubuntu5 [250 kB] Get:85 http://ftpmaster.internal/ubuntu groovy/main amd64 logsave amd64 1.45.6-1ubuntu1 [10.3 kB] Get:86 http://ftpmaster.internal/ubuntu groovy/main amd64 libext2fs2 amd64 1.45.6-1ubuntu1 [184 kB] Get:87 http://ftpmaster.internal/ubuntu groovy/main amd64 e2fsprogs amd64 1.45.6-1ubuntu1 [529 kB] Get:88 http://ftpmaster.internal/ubuntu groovy/main amd64 init amd64 1.58 [6172 B] Get:89 http://ftpmaster.internal/ubuntu groovy/main amd64 libcap-ng0 amd64 0.7.9-2.2 [11.1 kB] Get:90 http://ftpmaster.internal/ubuntu groovy/main amd64 libdebconfclient0 amd64 0.252ubuntu1 [6284 B] Get:91 http://ftpmaster.internal/ubuntu groovy/main amd64 libpam-runtime all 1.3.1-5ubuntu5 [37.3 kB] Get:92 http://ftpmaster.internal/ubuntu groovy/main amd64 libpcre3 amd64 2:8.39-13 [232 kB] Get:93 http://ftpmaster.internal/ubuntu groovy/main amd64 libsepol1 amd64 3.1-1 [255 kB] Get:94 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libsemanage-common all 3.1-1 [10.2 kB] Get:95 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libsemanage1 amd64 3.1-1 [86.2 kB] Get:96 http://ftpmaster.internal/ubuntu groovy/main amd64 passwd amd64 1:4.8.1-1ubuntu6 [797 kB] Get:97 http://ftpmaster.internal/ubuntu groovy/main amd64 libcom-err2 amd64 1.45.6-1ubuntu1 [9664 B] Get:98 http://ftpmaster.internal/ubuntu groovy/main amd64 libprocps8 amd64 2:3.3.16-5ubuntu1 [32.8 kB] Get:99 http://ftpmaster.internal/ubuntu groovy/main amd64 libss2 amd64 1.45.6-1ubuntu1 [11.3 kB] Get:100 http://ftpmaster.internal/ubuntu groovy/main amd64 procps amd64 2:3.3.16-5ubuntu1 [232 kB] Get:101 http://ftpmaster.internal/ubuntu groovy/main amd64 openssl amd64 1.1.1f-1ubuntu3 [620 kB] Get:102 http://ftpmaster.internal/ubuntu groovy/main amd64 ca-certificates all 20190110ubuntu2 [145 kB] Get:103 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libsqlite3-0 amd64 3.32.3-1 [550 kB] Get:104 http://ftpmaster.internal/ubuntu groovy/main amd64 tzdata all 2020a-0ubuntu1 [293 kB] Get:105 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 xz-utils amd64 5.2.4-1ubuntu1 [82.5 kB] Get:106 http://ftpmaster.internal/ubuntu groovy/main amd64 libctf0 amd64 2.34.90.20200706-1ubuntu1 [46.8 kB] Get:107 http://ftpmaster.internal/ubuntu groovy/main amd64 binutils-x86-64-linux-gnu amd64 2.34.90.20200706-1ubuntu1 [1628 kB] Get:108 http://ftpmaster.internal/ubuntu groovy/main amd64 libbinutils amd64 2.34.90.20200706-1ubuntu1 [477 kB] Get:109 http://ftpmaster.internal/ubuntu groovy/main amd64 binutils amd64 2.34.90.20200706-1ubuntu1 [3388 B] Get:110 http://ftpmaster.internal/ubuntu groovy/main amd64 binutils-common amd64 2.34.90.20200706-1ubuntu1 [212 kB] Get:111 http://ftpmaster.internal/ubuntu groovy/main amd64 libctf-nobfd0 amd64 2.34.90.20200706-1ubuntu1 [47.3 kB] Get:112 http://ftpmaster.internal/ubuntu groovy/main amd64 make amd64 4.3-4ubuntu1 [167 kB] Get:113 http://ftpmaster.internal/ubuntu groovy/main amd64 dpkg-dev all 1.19.7ubuntu4 [679 kB] Get:114 http://ftpmaster.internal/ubuntu groovy/main amd64 libdpkg-perl all 1.19.7ubuntu4 [230 kB] Get:115 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 build-essential amd64 12.8ubuntu3 [4640 B] Get:116 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libasan5 amd64 9.3.0-15ubuntu1 [395 kB] Get:117 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 g++-9 amd64 9.3.0-15ubuntu1 [8404 kB] Get:118 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 gcc-9 amd64 9.3.0-15ubuntu1 [8240 kB] Get:119 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libstdc++-9-dev amd64 9.3.0-15ubuntu1 [1714 kB] Get:120 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libgcc-9-dev amd64 9.3.0-15ubuntu1 [2360 kB] Get:121 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 cpp-9 amd64 9.3.0-15ubuntu1 [7492 kB] Get:122 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 gcc-9-base amd64 9.3.0-15ubuntu1 [19.6 kB] Get:123 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libmpfr6 amd64 4.1.0-3 [1401 kB] Get:124 http://ftpmaster.internal/ubuntu groovy/main amd64 libassuan0 amd64 2.5.3-7.1 [35.8 kB] Get:125 http://ftpmaster.internal/ubuntu groovy/main amd64 pinentry-curses amd64 1.1.0-4build1 [36.5 kB] Get:126 http://ftpmaster.internal/ubuntu groovy/main amd64 libnpth0 amd64 1.6-2 [7992 B] Get:127 http://ftpmaster.internal/ubuntu groovy/main amd64 gpg amd64 2.2.20-1ubuntu1 [485 kB] Get:128 http://ftpmaster.internal/ubuntu groovy/main amd64 gpgconf amd64 2.2.20-1ubuntu1 [124 kB] Get:129 http://ftpmaster.internal/ubuntu groovy/main amd64 gpg-agent amd64 2.2.20-1ubuntu1 [232 kB] Get:130 http://ftpmaster.internal/ubuntu groovy/main amd64 pkgbinarymangler all 146 [31.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 73.8 MB in 1s (76.0 MB/s) (Reading database ... 12816 files and directories currently installed.) Preparing to unpack .../libcrypt-dev_1%3a4.4.16-1ubuntu1_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.16-1ubuntu1) over (1:4.4.10-10ubuntu4) ... Preparing to unpack .../libc6-dev_2.31-0ubuntu10_amd64.deb ... Unpacking libc6-dev:amd64 (2.31-0ubuntu10) over (2.31-0ubuntu9) ... Preparing to unpack .../libc-dev-bin_2.31-0ubuntu10_amd64.deb ... Unpacking libc-dev-bin (2.31-0ubuntu10) over (2.31-0ubuntu9) ... Preparing to unpack .../libcrypt1_1%3a4.4.16-1ubuntu1_amd64.deb ... Unpacking libcrypt1:amd64 (1:4.4.16-1ubuntu1) over (1:4.4.10-10ubuntu4) ... Setting up libcrypt1:amd64 (1:4.4.16-1ubuntu1) ... (Reading database ... 12815 files and directories currently installed.) Preparing to unpack .../0-linux-libc-dev_5.4.0-40.44_amd64.deb ... Unpacking linux-libc-dev:amd64 (5.4.0-40.44) over (5.4.0-26.30) ... Preparing to unpack .../1-libatomic1_10.1.0-6ubuntu1_amd64.deb ... Unpacking libatomic1:amd64 (10.1.0-6ubuntu1) over (10-20200411-0ubuntu1) ... Preparing to unpack .../2-libubsan1_10.1.0-6ubuntu1_amd64.deb ... Unpacking libubsan1:amd64 (10.1.0-6ubuntu1) over (10-20200411-0ubuntu1) ... Preparing to unpack .../3-libtsan0_10.1.0-6ubuntu1_amd64.deb ... Unpacking libtsan0:amd64 (10.1.0-6ubuntu1) over (10-20200411-0ubuntu1) ... Preparing to unpack .../4-libquadmath0_10.1.0-6ubuntu1_amd64.deb ... Unpacking libquadmath0:amd64 (10.1.0-6ubuntu1) over (10-20200411-0ubuntu1) ... Preparing to unpack .../5-liblsan0_10.1.0-6ubuntu1_amd64.deb ... Unpacking liblsan0:amd64 (10.1.0-6ubuntu1) over (10-20200411-0ubuntu1) ... Preparing to unpack .../6-libitm1_10.1.0-6ubuntu1_amd64.deb ... Unpacking libitm1:amd64 (10.1.0-6ubuntu1) over (10-20200411-0ubuntu1) ... Preparing to unpack .../7-libgomp1_10.1.0-6ubuntu1_amd64.deb ... Unpacking libgomp1:amd64 (10.1.0-6ubuntu1) over (10-20200411-0ubuntu1) ... Preparing to unpack .../8-gcc-10-base_10.1.0-6ubuntu1_amd64.deb ... Unpacking gcc-10-base:amd64 (10.1.0-6ubuntu1) over (10-20200411-0ubuntu1) ... Setting up gcc-10-base:amd64 (10.1.0-6ubuntu1) ... (Reading database ... 12815 files and directories currently installed.) Preparing to unpack .../libgcc-s1_10.1.0-6ubuntu1_amd64.deb ... Unpacking libgcc-s1:amd64 (10.1.0-6ubuntu1) over (10-20200411-0ubuntu1) ... Setting up libgcc-s1:amd64 (10.1.0-6ubuntu1) ... (Reading database ... 12815 files and directories currently installed.) Preparing to unpack .../libcc1-0_10.1.0-6ubuntu1_amd64.deb ... Unpacking libcc1-0:amd64 (10.1.0-6ubuntu1) over (10-20200411-0ubuntu1) ... Preparing to unpack .../libstdc++6_10.1.0-6ubuntu1_amd64.deb ... Unpacking libstdc++6:amd64 (10.1.0-6ubuntu1) over (10-20200411-0ubuntu1) ... Setting up libstdc++6:amd64 (10.1.0-6ubuntu1) ... (Reading database ... 12815 files and directories currently installed.) Preparing to unpack .../libc6_2.31-0ubuntu10_amd64.deb ... Unpacking libc6:amd64 (2.31-0ubuntu10) over (2.31-0ubuntu9) ... Setting up libc6:amd64 (2.31-0ubuntu10) ... (Reading database ... 12815 files and directories currently installed.) Preparing to unpack .../base-files_11ubuntu9_amd64.deb ... Unpacking base-files (11ubuntu9) over (11ubuntu5) ... Setting up base-files (11ubuntu9) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Installing new version of config file /etc/update-motd.d/50-motd-news ... (Reading database ... 12815 files and directories currently installed.) Preparing to unpack .../debianutils_4.11_amd64.deb ... Unpacking debianutils (4.11) over (4.9.1) ... Setting up debianutils (4.11) ... (Reading database ... 12815 files and directories currently installed.) Preparing to unpack .../bash_5.0-6ubuntu2_amd64.deb ... Unpacking bash (5.0-6ubuntu2) over (5.0-6ubuntu1) ... Setting up bash (5.0-6ubuntu2) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 12815 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.35.2-7ubuntu3_amd64.deb ... Unpacking bsdutils (1:2.35.2-7ubuntu3) over (1:2.34-0.1ubuntu9) ... Setting up bsdutils (1:2.35.2-7ubuntu3) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../coreutils_8.30-3ubuntu3_amd64.deb ... Unpacking coreutils (8.30-3ubuntu3) over (8.30-3ubuntu2) ... Setting up coreutils (8.30-3ubuntu3) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../dpkg_1.19.7ubuntu4_amd64.deb ... Unpacking dpkg (1.19.7ubuntu4) over (1.19.7ubuntu3) ... Setting up dpkg (1.19.7ubuntu4) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../perl_5.30.3-4_amd64.deb ... Unpacking perl (5.30.3-4) over (5.30.0-9build1) ... Preparing to unpack .../perl-modules-5.30_5.30.3-4_all.deb ... Unpacking perl-modules-5.30 (5.30.3-4) over (5.30.0-9build1) ... Preparing to unpack .../libperl5.30_5.30.3-4_amd64.deb ... Unpacking libperl5.30:amd64 (5.30.3-4) over (5.30.0-9build1) ... Preparing to unpack .../perl-base_5.30.3-4_amd64.deb ... Unpacking perl-base (5.30.3-4) over (5.30.0-9build1) ... Setting up perl-base (5.30.3-4) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../bzip2_1.0.8-3ubuntu1_amd64.deb ... Unpacking bzip2 (1.0.8-3ubuntu1) over (1.0.8-2) ... Preparing to unpack .../libbz2-1.0_1.0.8-3ubuntu1_amd64.deb ... Unpacking libbz2-1.0:amd64 (1.0.8-3ubuntu1) over (1.0.8-2) ... Setting up libbz2-1.0:amd64 (1.0.8-3ubuntu1) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../debconf_1.5.74_all.deb ... Unpacking debconf (1.5.74) over (1.5.73) ... Setting up debconf (1.5.74) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../dash_0.5.10.2-7_amd64.deb ... Unpacking dash (0.5.10.2-7) over (0.5.10.2-6) ... Setting up dash (0.5.10.2-7) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../diffutils_1%3a3.7-3build1_amd64.deb ... Unpacking diffutils (1:3.7-3build1) over (1:3.7-3) ... Setting up diffutils (1:3.7-3build1) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../gzip_1.10-2ubuntu1_amd64.deb ... Unpacking gzip (1.10-2ubuntu1) over (1.10-0ubuntu4) ... Setting up gzip (1.10-2ubuntu1) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../login_1%3a4.8.1-1ubuntu6_amd64.deb ... Unpacking login (1:4.8.1-1ubuntu6) over (1:4.8.1-1ubuntu5) ... Setting up login (1:4.8.1-1ubuntu6) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.2-1_amd64.deb ... Unpacking ncurses-bin (6.2-1) over (6.2-0ubuntu2) ... Setting up ncurses-bin (6.2-1) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../sed_4.7-1build1_amd64.deb ... Unpacking sed (4.7-1build1) over (4.7-1) ... Setting up sed (4.7-1build1) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../libblkid1_2.35.2-7ubuntu3_amd64.deb ... Unpacking libblkid1:amd64 (2.35.2-7ubuntu3) over (2.34-0.1ubuntu9) ... Setting up libblkid1:amd64 (2.35.2-7ubuntu3) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../libuuid1_2.35.2-7ubuntu3_amd64.deb ... Unpacking libuuid1:amd64 (2.35.2-7ubuntu3) over (2.34-0.1ubuntu9) ... Setting up libuuid1:amd64 (2.35.2-7ubuntu3) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../libfdisk1_2.35.2-7ubuntu3_amd64.deb ... Unpacking libfdisk1:amd64 (2.35.2-7ubuntu3) over (2.34-0.1ubuntu9) ... Preparing to unpack .../libselinux1_3.1-1_amd64.deb ... Unpacking libselinux1:amd64 (3.1-1) over (3.0-1build2) ... Setting up libselinux1:amd64 (3.1-1) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../libmount1_2.35.2-7ubuntu3_amd64.deb ... Unpacking libmount1:amd64 (2.35.2-7ubuntu3) over (2.34-0.1ubuntu9) ... Setting up libmount1:amd64 (2.35.2-7ubuntu3) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../libncurses6_6.2-1_amd64.deb ... Unpacking libncurses6:amd64 (6.2-1) over (6.2-0ubuntu2) ... Preparing to unpack .../libncursesw6_6.2-1_amd64.deb ... Unpacking libncursesw6:amd64 (6.2-1) over (6.2-0ubuntu2) ... Preparing to unpack .../libtinfo6_6.2-1_amd64.deb ... Unpacking libtinfo6:amd64 (6.2-1) over (6.2-0ubuntu2) ... Setting up libtinfo6:amd64 (6.2-1) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.35.2-7ubuntu3_amd64.deb ... Unpacking libsmartcols1:amd64 (2.35.2-7ubuntu3) over (2.34-0.1ubuntu9) ... Setting up libsmartcols1:amd64 (2.35.2-7ubuntu3) ... (Reading database ... 12818 files and directories currently installed.) Preparing to unpack .../fdisk_2.35.2-7ubuntu3_amd64.deb ... Unpacking fdisk (2.35.2-7ubuntu3) over (2.34-0.1ubuntu9) ... Preparing to unpack .../util-linux_2.35.2-7ubuntu3_amd64.deb ... Unpacking util-linux (2.35.2-7ubuntu3) over (2.34-0.1ubuntu9) ... Setting up util-linux (2.35.2-7ubuntu3) ... Installing new version of config file /etc/init.d/hwclock.sh ... Installing new version of config file /etc/pam.d/su ... (Reading database ... 12821 files and directories currently installed.) Preparing to unpack .../init-system-helpers_1.58_all.deb ... Unpacking init-system-helpers (1.58) over (1.57) ... Setting up init-system-helpers (1.58) ... (Reading database ... 12821 files and directories currently installed.) Preparing to unpack .../libc-bin_2.31-0ubuntu10_amd64.deb ... Unpacking libc-bin (2.31-0ubuntu10) over (2.31-0ubuntu9) ... Setting up libc-bin (2.31-0ubuntu10) ... (Reading database ... 12821 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.2-1_all.deb ... Unpacking ncurses-base (6.2-1) over (6.2-0ubuntu2) ... Setting up ncurses-base (6.2-1) ... (Reading database ... 12821 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_2.96-3ubuntu1_amd64.deb ... Unpacking sysvinit-utils (2.96-3ubuntu1) over (2.96-2.1ubuntu1) ... Setting up sysvinit-utils (2.96-3ubuntu1) ... (Reading database ... 12821 files and directories currently installed.) Preparing to unpack .../libgpg-error0_1.38-2_amd64.deb ... Unpacking libgpg-error0:amd64 (1.38-2) over (1.37-1) ... Setting up libgpg-error0:amd64 (1.38-2) ... (Reading database ... 12821 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.8.5-5ubuntu2_amd64.deb ... Unpacking libgcrypt20:amd64 (1.8.5-5ubuntu2) over (1.8.5-5ubuntu1) ... Setting up libgcrypt20:amd64 (1.8.5-5ubuntu2) ... (Reading database ... 12821 files and directories currently installed.) Preparing to unpack .../liblzma5_5.2.4-1ubuntu1_amd64.deb ... Unpacking liblzma5:amd64 (5.2.4-1ubuntu1) over (5.2.4-1) ... Setting up liblzma5:amd64 (5.2.4-1ubuntu1) ... (Reading database ... 12821 files and directories currently installed.) Preparing to unpack .../systemd-sysv_245.6-3ubuntu2_amd64.deb ... Unpacking systemd-sysv (245.6-3ubuntu2) over (245.4-4ubuntu3) ... Preparing to unpack .../systemd-timesyncd_245.6-3ubuntu2_amd64.deb ... Unpacking systemd-timesyncd (245.6-3ubuntu2) over (245.4-4ubuntu3) ... Preparing to unpack .../libacl1_2.2.53-8_amd64.deb ... Unpacking libacl1:amd64 (2.2.53-8) over (2.2.53-6) ... Setting up libacl1:amd64 (2.2.53-8) ... (Reading database ... 12821 files and directories currently installed.) Preparing to unpack .../libapparmor1_2.13.3-7ubuntu6_amd64.deb ... Unpacking libapparmor1:amd64 (2.13.3-7ubuntu6) over (2.13.3-7ubuntu5) ... Preparing to unpack .../libcap2_1%3a2.36-1_amd64.deb ... Unpacking libcap2:amd64 (1:2.36-1) over (1:2.32-1) ... Preparing to unpack .../libargon2-1_0~20171227-0.2build20.10.0_amd64.deb ... Unpacking libargon2-1:amd64 (0~20171227-0.2build20.10.0) over (0~20171227-0.2) ... Preparing to unpack .../libudev1_245.6-3ubuntu2_amd64.deb ... Unpacking libudev1:amd64 (245.6-3ubuntu2) over (245.4-4ubuntu3) ... Setting up libudev1:amd64 (245.6-3ubuntu2) ... (Reading database ... 12821 files and directories currently installed.) Preparing to unpack .../libdevmapper1.02.1_2%3a1.02.167-1ubuntu3_amd64.deb ... Unpacking libdevmapper1.02.1:amd64 (2:1.02.167-1ubuntu3) over (2:1.02.167-1ubuntu1) ... Preparing to unpack .../libjson-c4_0.13.1+dfsg-9_amd64.deb ... Unpacking libjson-c4:amd64 (0.13.1+dfsg-9) over (0.13.1+dfsg-7) ... Preparing to unpack .../libssl1.1_1.1.1f-1ubuntu3_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1f-1ubuntu3) over (1.1.1f-1ubuntu2) ... Preparing to unpack .../libcryptsetup12_2%3a2.3.3-1ubuntu3_amd64.deb ... Unpacking libcryptsetup12:amd64 (2:2.3.3-1ubuntu3) over (2:2.2.2-3ubuntu2) ... Selecting previously unselected package libnettle8:amd64. Preparing to unpack .../libnettle8_3.6-2_amd64.deb ... Unpacking libnettle8:amd64 (3.6-2) ... Setting up libnettle8:amd64 (3.6-2) ... (Reading database ... 12828 files and directories currently installed.) Preparing to unpack .../libgmp10_2%3a6.2.0+dfsg-6_amd64.deb ... Unpacking libgmp10:amd64 (2:6.2.0+dfsg-6) over (2:6.2.0+dfsg-4) ... Setting up libgmp10:amd64 (2:6.2.0+dfsg-6) ... Selecting previously unselected package libhogweed6:amd64. (Reading database ... 12828 files and directories currently installed.) Preparing to unpack .../libhogweed6_3.6-2_amd64.deb ... Unpacking libhogweed6:amd64 (3.6-2) ... Setting up libhogweed6:amd64 (3.6-2) ... (Reading database ... 12833 files and directories currently installed.) Preparing to unpack .../libunistring2_0.9.10-4_amd64.deb ... Unpacking libunistring2:amd64 (0.9.10-4) over (0.9.10-2) ... Setting up libunistring2:amd64 (0.9.10-4) ... (Reading database ... 12833 files and directories currently installed.) Preparing to unpack .../libidn2-0_2.3.0-1_amd64.deb ... Unpacking libidn2-0:amd64 (2.3.0-1) over (2.2.0-2) ... Setting up libidn2-0:amd64 (2.3.0-1) ... (Reading database ... 12833 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.6.13-4ubuntu4_amd64.deb ... Unpacking libgnutls30:amd64 (3.6.13-4ubuntu4) over (3.6.13-2ubuntu1) ... Setting up libgnutls30:amd64 (3.6.13-4ubuntu4) ... (Reading database ... 12833 files and directories currently installed.) Preparing to unpack .../libkmod2_27+20200310-2ubuntu1_amd64.deb ... Unpacking libkmod2:amd64 (27+20200310-2ubuntu1) over (27-1ubuntu2) ... Preparing to unpack .../libpam0g_1.3.1-5ubuntu5_amd64.deb ... Unpacking libpam0g:amd64 (1.3.1-5ubuntu5) over (1.3.1-5ubuntu4) ... Setting up libpam0g:amd64 (1.3.1-5ubuntu5) ... (Reading database ... 12833 files and directories currently installed.) Preparing to unpack .../libseccomp2_2.4.3-1ubuntu4_amd64.deb ... Unpacking libseccomp2:amd64 (2.4.3-1ubuntu4) over (2.4.3-1ubuntu1) ... Setting up libseccomp2:amd64 (2.4.3-1ubuntu4) ... (Reading database ... 12833 files and directories currently installed.) Preparing to unpack .../mount_2.35.2-7ubuntu3_amd64.deb ... Unpacking mount (2.35.2-7ubuntu3) over (2.34-0.1ubuntu9) ... Preparing to unpack .../systemd_245.6-3ubuntu2_amd64.deb ... Unpacking systemd (245.6-3ubuntu2) over (245.4-4ubuntu3) ... Preparing to unpack .../libsystemd0_245.6-3ubuntu2_amd64.deb ... Unpacking libsystemd0:amd64 (245.6-3ubuntu2) over (245.4-4ubuntu3) ... Setting up libsystemd0:amd64 (245.6-3ubuntu2) ... (Reading database ... 12831 files and directories currently installed.) Preparing to unpack .../libzstd1_1.4.5+dfsg-3_amd64.deb ... Unpacking libzstd1:amd64 (1.4.5+dfsg-3) over (1.4.4+dfsg-3) ... Setting up libzstd1:amd64 (1.4.5+dfsg-3) ... (Reading database ... 12831 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0_2.1.7_amd64.deb ... Unpacking libapt-pkg6.0:amd64 (2.1.7) over (2.0.2) ... Setting up libapt-pkg6.0:amd64 (2.1.7) ... (Reading database ... 12831 files and directories currently installed.) Preparing to unpack .../gpgv_2.2.20-1ubuntu1_amd64.deb ... Unpacking gpgv (2.2.20-1ubuntu1) over (2.2.19-3ubuntu2) ... Setting up gpgv (2.2.20-1ubuntu1) ... (Reading database ... 12831 files and directories currently installed.) Preparing to unpack .../ubuntu-keyring_2020.06.17.1_all.deb ... Unpacking ubuntu-keyring (2020.06.17.1) over (2020.02.11.2) ... Setting up ubuntu-keyring (2020.06.17.1) ... (Reading database ... 12830 files and directories currently installed.) Preparing to unpack .../archives/apt_2.1.7_amd64.deb ... Unpacking apt (2.1.7) over (2.0.2) ... Setting up apt (2.1.7) ... (Reading database ... 12830 files and directories currently installed.) Preparing to unpack .../libpam-modules-bin_1.3.1-5ubuntu5_amd64.deb ... Unpacking libpam-modules-bin (1.3.1-5ubuntu5) over (1.3.1-5ubuntu4) ... Setting up libpam-modules-bin (1.3.1-5ubuntu5) ... (Reading database ... 12830 files and directories currently installed.) Preparing to unpack .../libpam-modules_1.3.1-5ubuntu5_amd64.deb ... Unpacking libpam-modules:amd64 (1.3.1-5ubuntu5) over (1.3.1-5ubuntu4) ... Setting up libpam-modules:amd64 (1.3.1-5ubuntu5) ... (Reading database ... 12830 files and directories currently installed.) Preparing to unpack .../logsave_1.45.6-1ubuntu1_amd64.deb ... Unpacking logsave (1.45.6-1ubuntu1) over (1.45.5-2ubuntu1) ... Preparing to unpack .../libext2fs2_1.45.6-1ubuntu1_amd64.deb ... Unpacking libext2fs2:amd64 (1.45.6-1ubuntu1) over (1.45.5-2ubuntu1) ... Setting up libext2fs2:amd64 (1.45.6-1ubuntu1) ... (Reading database ... 12830 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.45.6-1ubuntu1_amd64.deb ... Unpacking e2fsprogs (1.45.6-1ubuntu1) over (1.45.5-2ubuntu1) ... Setting up libapparmor1:amd64 (2.13.3-7ubuntu6) ... Setting up libcap2:amd64 (1:2.36-1) ... Setting up libargon2-1:amd64 (0~20171227-0.2build20.10.0) ... Setting up libdevmapper1.02.1:amd64 (2:1.02.167-1ubuntu3) ... Setting up libjson-c4:amd64 (0.13.1+dfsg-9) ... Setting up libssl1.1:amd64 (1.1.1f-1ubuntu3) ... Setting up libcryptsetup12:amd64 (2:2.3.3-1ubuntu3) ... Setting up libkmod2:amd64 (27+20200310-2ubuntu1) ... Setting up mount (2.35.2-7ubuntu3) ... Setting up systemd-timesyncd (245.6-3ubuntu2) ... Installing new version of config file /etc/dhcp/dhclient-exit-hooks.d/timesyncd ... Setting up systemd (245.6-3ubuntu2) ... Installing new version of config file /etc/systemd/journald.conf ... Initializing machine ID from KVM UUID. Setting up systemd-sysv (245.6-3ubuntu2) ... (Reading database ... 12830 files and directories currently installed.) Preparing to unpack .../archives/init_1.58_amd64.deb ... Unpacking init (1.58) over (1.57) ... Preparing to unpack .../libcap-ng0_0.7.9-2.2_amd64.deb ... Unpacking libcap-ng0:amd64 (0.7.9-2.2) over (0.7.9-2.1build1) ... Setting up libcap-ng0:amd64 (0.7.9-2.2) ... (Reading database ... 12830 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.252ubuntu1_amd64.deb ... Unpacking libdebconfclient0:amd64 (0.252ubuntu1) over (0.251ubuntu1) ... Setting up libdebconfclient0:amd64 (0.252ubuntu1) ... (Reading database ... 12830 files and directories currently installed.) Preparing to unpack .../libpam-runtime_1.3.1-5ubuntu5_all.deb ... Unpacking libpam-runtime (1.3.1-5ubuntu5) over (1.3.1-5ubuntu4) ... Setting up libpam-runtime (1.3.1-5ubuntu5) ... (Reading database ... 12830 files and directories currently installed.) Preparing to unpack .../libpcre3_2%3a8.39-13_amd64.deb ... Unpacking libpcre3:amd64 (2:8.39-13) over (2:8.39-12build1) ... Setting up libpcre3:amd64 (2:8.39-13) ... (Reading database ... 12830 files and directories currently installed.) Preparing to unpack .../libsepol1_3.1-1_amd64.deb ... Unpacking libsepol1:amd64 (3.1-1) over (3.0-1) ... Setting up libsepol1:amd64 (3.1-1) ... (Reading database ... 12830 files and directories currently installed.) Preparing to unpack .../libsemanage-common_3.1-1_all.deb ... Unpacking libsemanage-common (3.1-1) over (3.0-1build2) ... Setting up libsemanage-common (3.1-1) ... (Reading database ... 12830 files and directories currently installed.) Preparing to unpack .../libsemanage1_3.1-1_amd64.deb ... Unpacking libsemanage1:amd64 (3.1-1) over (3.0-1build2) ... Setting up libsemanage1:amd64 (3.1-1) ... (Reading database ... 12830 files and directories currently installed.) Preparing to unpack .../passwd_1%3a4.8.1-1ubuntu6_amd64.deb ... Unpacking passwd (1:4.8.1-1ubuntu6) over (1:4.8.1-1ubuntu5) ... Setting up passwd (1:4.8.1-1ubuntu6) ... (Reading database ... 12830 files and directories currently installed.) Preparing to unpack .../00-libcom-err2_1.45.6-1ubuntu1_amd64.deb ... Unpacking libcom-err2:amd64 (1.45.6-1ubuntu1) over (1.45.5-2ubuntu1) ... Preparing to unpack .../01-libprocps8_2%3a3.3.16-5ubuntu1_amd64.deb ... Unpacking libprocps8:amd64 (2:3.3.16-5ubuntu1) over (2:3.3.16-1ubuntu2) ... Preparing to unpack .../02-libss2_1.45.6-1ubuntu1_amd64.deb ... Unpacking libss2:amd64 (1.45.6-1ubuntu1) over (1.45.5-2ubuntu1) ... Preparing to unpack .../03-procps_2%3a3.3.16-5ubuntu1_amd64.deb ... Unpacking procps (2:3.3.16-5ubuntu1) over (2:3.3.16-1ubuntu2) ... Preparing to unpack .../04-openssl_1.1.1f-1ubuntu3_amd64.deb ... Unpacking openssl (1.1.1f-1ubuntu3) over (1.1.1f-1ubuntu2) ... Preparing to unpack .../05-ca-certificates_20190110ubuntu2_all.deb ... Unpacking ca-certificates (20190110ubuntu2) over (20190110ubuntu1) ... Preparing to unpack .../06-libsqlite3-0_3.32.3-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.32.3-1) over (3.31.1-4) ... Preparing to unpack .../07-tzdata_2020a-0ubuntu1_all.deb ... Unpacking tzdata (2020a-0ubuntu1) over (2019c-3ubuntu1) ... Preparing to unpack .../08-xz-utils_5.2.4-1ubuntu1_amd64.deb ... Unpacking xz-utils (5.2.4-1ubuntu1) over (5.2.4-1) ... Preparing to unpack .../09-libctf0_2.34.90.20200706-1ubuntu1_amd64.deb ... Unpacking libctf0:amd64 (2.34.90.20200706-1ubuntu1) over (2.34-6ubuntu1) ... Preparing to unpack .../10-binutils-x86-64-linux-gnu_2.34.90.20200706-1ubuntu1_amd64.deb ... Unpacking binutils-x86-64-linux-gnu (2.34.90.20200706-1ubuntu1) over (2.34-6ubuntu1) ... Preparing to unpack .../11-libbinutils_2.34.90.20200706-1ubuntu1_amd64.deb ... Unpacking libbinutils:amd64 (2.34.90.20200706-1ubuntu1) over (2.34-6ubuntu1) ... Preparing to unpack .../12-binutils_2.34.90.20200706-1ubuntu1_amd64.deb ... Unpacking binutils (2.34.90.20200706-1ubuntu1) over (2.34-6ubuntu1) ... Preparing to unpack .../13-binutils-common_2.34.90.20200706-1ubuntu1_amd64.deb ... Unpacking binutils-common:amd64 (2.34.90.20200706-1ubuntu1) over (2.34-6ubuntu1) ... Preparing to unpack .../14-libctf-nobfd0_2.34.90.20200706-1ubuntu1_amd64.deb ... Unpacking libctf-nobfd0:amd64 (2.34.90.20200706-1ubuntu1) over (2.34-6ubuntu1) ... Preparing to unpack .../15-make_4.3-4ubuntu1_amd64.deb ... Unpacking make (4.3-4ubuntu1) over (4.2.1-1.2) ... Preparing to unpack .../16-dpkg-dev_1.19.7ubuntu4_all.deb ... Unpacking dpkg-dev (1.19.7ubuntu4) over (1.19.7ubuntu3) ... Preparing to unpack .../17-libdpkg-perl_1.19.7ubuntu4_all.deb ... Unpacking libdpkg-perl (1.19.7ubuntu4) over (1.19.7ubuntu3) ... Preparing to unpack .../18-build-essential_12.8ubuntu3_amd64.deb ... Unpacking build-essential (12.8ubuntu3) over (12.8ubuntu1) ... Preparing to unpack .../19-libasan5_9.3.0-15ubuntu1_amd64.deb ... Unpacking libasan5:amd64 (9.3.0-15ubuntu1) over (9.3.0-10ubuntu2) ... Preparing to unpack .../20-g++-9_9.3.0-15ubuntu1_amd64.deb ... Unpacking g++-9 (9.3.0-15ubuntu1) over (9.3.0-10ubuntu2) ... Preparing to unpack .../21-gcc-9_9.3.0-15ubuntu1_amd64.deb ... Unpacking gcc-9 (9.3.0-15ubuntu1) over (9.3.0-10ubuntu2) ... Preparing to unpack .../22-libstdc++-9-dev_9.3.0-15ubuntu1_amd64.deb ... Unpacking libstdc++-9-dev:amd64 (9.3.0-15ubuntu1) over (9.3.0-10ubuntu2) ... Preparing to unpack .../23-libgcc-9-dev_9.3.0-15ubuntu1_amd64.deb ... Unpacking libgcc-9-dev:amd64 (9.3.0-15ubuntu1) over (9.3.0-10ubuntu2) ... Preparing to unpack .../24-cpp-9_9.3.0-15ubuntu1_amd64.deb ... Unpacking cpp-9 (9.3.0-15ubuntu1) over (9.3.0-10ubuntu2) ... Preparing to unpack .../25-gcc-9-base_9.3.0-15ubuntu1_amd64.deb ... Unpacking gcc-9-base:amd64 (9.3.0-15ubuntu1) over (9.3.0-10ubuntu2) ... Preparing to unpack .../26-libmpfr6_4.1.0-3_amd64.deb ... Unpacking libmpfr6:amd64 (4.1.0-3) over (4.0.2-1) ... Preparing to unpack .../27-libassuan0_2.5.3-7.1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7.1) over (2.5.3-7ubuntu2) ... Preparing to unpack .../28-pinentry-curses_1.1.0-4build1_amd64.deb ... Unpacking pinentry-curses (1.1.0-4build1) over (1.1.0-3build1) ... Preparing to unpack .../29-libnpth0_1.6-2_amd64.deb ... Unpacking libnpth0:amd64 (1.6-2) over (1.6-1) ... Preparing to unpack .../30-gpg_2.2.20-1ubuntu1_amd64.deb ... Unpacking gpg (2.2.20-1ubuntu1) over (2.2.19-3ubuntu2) ... Preparing to unpack .../31-gpgconf_2.2.20-1ubuntu1_amd64.deb ... Unpacking gpgconf (2.2.20-1ubuntu1) over (2.2.19-3ubuntu2) ... Preparing to unpack .../32-gpg-agent_2.2.20-1ubuntu1_amd64.deb ... Unpacking gpg-agent (2.2.20-1ubuntu1) over (2.2.19-3ubuntu2) ... Preparing to unpack .../33-pkgbinarymangler_146_all.deb ... Unpacking pkgbinarymangler (146) over (144) ... Setting up perl-modules-5.30 (5.30.3-4) ... Setting up pkgbinarymangler (146) ... Setting up init (1.58) ... Setting up libsqlite3-0:amd64 (3.32.3-1) ... Setting up binutils-common:amd64 (2.34.90.20200706-1ubuntu1) ... Setting up linux-libc-dev:amd64 (5.4.0-40.44) ... Setting up libctf-nobfd0:amd64 (2.34.90.20200706-1ubuntu1) ... Setting up libnpth0:amd64 (1.6-2) ... Setting up libcom-err2:amd64 (1.45.6-1ubuntu1) ... Setting up libassuan0:amd64 (2.5.3-7.1) ... Setting up libgomp1:amd64 (10.1.0-6ubuntu1) ... Setting up bzip2 (1.0.8-3ubuntu1) ... Setting up tzdata (2020a-0ubuntu1) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Jul 16 05:13:46 UTC 2020. Universal Time is now: Thu Jul 16 05:13:46 UTC 2020. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up make (4.3-4ubuntu1) ... Setting up libmpfr6:amd64 (4.1.0-3) ... Setting up libncurses6:amd64 (6.2-1) ... Setting up xz-utils (5.2.4-1ubuntu1) ... Setting up libquadmath0:amd64 (10.1.0-6ubuntu1) ... Setting up libatomic1:amd64 (10.1.0-6ubuntu1) ... Setting up libss2:amd64 (1.45.6-1ubuntu1) ... Setting up libncursesw6:amd64 (6.2-1) ... Setting up logsave (1.45.6-1ubuntu1) ... Setting up libfdisk1:amd64 (2.35.2-7ubuntu3) ... Setting up libubsan1:amd64 (10.1.0-6ubuntu1) ... Setting up libcrypt-dev:amd64 (1:4.4.16-1ubuntu1) ... Setting up gpgconf (2.2.20-1ubuntu1) ... Setting up libperl5.30:amd64 (5.30.3-4) ... Setting up libbinutils:amd64 (2.34.90.20200706-1ubuntu1) ... Setting up libc-dev-bin (2.31-0ubuntu10) ... Setting up openssl (1.1.1f-1ubuntu3) ... Setting up libcc1-0:amd64 (10.1.0-6ubuntu1) ... Setting up gpg (2.2.20-1ubuntu1) ... Setting up liblsan0:amd64 (10.1.0-6ubuntu1) ... Setting up libprocps8:amd64 (2:3.3.16-5ubuntu1) ... Setting up libitm1:amd64 (10.1.0-6ubuntu1) ... Setting up gcc-9-base:amd64 (9.3.0-15ubuntu1) ... Setting up libtsan0:amd64 (10.1.0-6ubuntu1) ... Setting up libctf0:amd64 (2.34.90.20200706-1ubuntu1) ... Setting up pinentry-curses (1.1.0-4build1) ... Setting up gpg-agent (2.2.20-1ubuntu1) ... Setting up e2fsprogs (1.45.6-1ubuntu1) ... Installing new version of config file /etc/mke2fs.conf ... Setting up fdisk (2.35.2-7ubuntu3) ... Setting up ca-certificates (20190110ubuntu2) ... Updating certificates in /etc/ssl/certs... 0 added, 1 removed; done. Setting up libasan5:amd64 (9.3.0-15ubuntu1) ... Setting up perl (5.30.3-4) ... Setting up libdpkg-perl (1.19.7ubuntu4) ... Setting up procps (2:3.3.16-5ubuntu1) ... Installing new version of config file /etc/sysctl.conf ... Removing obsolete conffile /etc/sysctl.d/10-link-restrictions.conf ... Setting up cpp-9 (9.3.0-15ubuntu1) ... Setting up libc6-dev:amd64 (2.31-0ubuntu10) ... Setting up binutils-x86-64-linux-gnu (2.34.90.20200706-1ubuntu1) ... Setting up binutils (2.34.90.20200706-1ubuntu1) ... Setting up dpkg-dev (1.19.7ubuntu4) ... Setting up libgcc-9-dev:amd64 (9.3.0-15ubuntu1) ... Setting up build-essential (12.8ubuntu3) ... Setting up gcc-9 (9.3.0-15ubuntu1) ... Setting up libstdc++-9-dev:amd64 (9.3.0-15ubuntu1) ... Setting up g++-9 (9.3.0-15ubuntu1) ... Processing triggers for systemd (245.6-3ubuntu2) ... Processing triggers for libc-bin (2.31-0ubuntu10) ... Processing triggers for ca-certificates (20190110ubuntu2) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-19595984 amd64 groovy-proposed -c chroot:build-PACKAGEBUILD-19595984 --arch=amd64 --dist=groovy-proposed --nolog -A macs_2.2.7.1-3.dsc Initiating build PACKAGEBUILD-19595984 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-185-generic #215-Ubuntu SMP Mon Jun 8 21:53:19 UTC 2020 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lcy01-amd64-017.buildd +==============================================================================+ | macs 2.2.7.1-3 (amd64) 16 Jul 2020 05:13 | +==============================================================================+ Package: macs Version: 2.2.7.1-3 Source Version: 2.2.7.1-3 Distribution: groovy-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/macs-KMcQcn/macs-2.2.7.1' with '<>' I: NOTICE: Log filtering will replace 'build/macs-KMcQcn' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-19595984/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- macs_2.2.7.1-3.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-UsK6x0/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-UsK6x0/apt_archive ./ InRelease Get:2 copy:/<>/resolver-UsK6x0/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-UsK6x0/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-UsK6x0/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-UsK6x0/apt_archive ./ Packages [526 B] Fetched 2859 B in 0s (223 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libhogweed5 libnettle7 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-UsK6x0/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12829 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, cython3, help2man, procps Filtered Build-Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, cython3, help2man, procps dpkg-deb: building package 'sbuild-build-depends-macs-dummy' in '/<>/resolver-ksswlj/apt_archive/sbuild-build-depends-macs-dummy.deb'. Ign:1 copy:/<>/resolver-ksswlj/apt_archive ./ InRelease Get:2 copy:/<>/resolver-ksswlj/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-ksswlj/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-ksswlj/apt_archive ./ Sources [261 B] Get:5 copy:/<>/resolver-ksswlj/apt_archive ./ Packages [583 B] Fetched 2963 B in 0s (258 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install macs build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libhogweed5 libnettle7 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libblas3 libcroco3 libdebhelper-perl libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libgfortran5 libglib2.0-0 libicu66 liblapack3 liblocale-gettext-perl libmagic-mgc libmagic1 libmpdec2 libpipeline1 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.8 libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db mime-support po-debconf python-pip-whl python3 python3-all python3-all-dev python3-atomicwrites python3-attr python3-dev python3-distutils python3-importlib-metadata python3-lib2to3 python3-minimal python3-more-itertools python3-numpy python3-packaging python3-pip python3-pkg-resources python3-pluggy python3-py python3-pyparsing python3-pytest python3-setuptools python3-six python3-wcwidth python3-wheel python3-zipp python3.8 python3.8-dev python3.8-minimal zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc cython-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python-attr-doc gfortran python-numpy-doc python3-numpy-dbg subversion python-pyparsing-doc python-setuptools-doc python3.8-venv python3.8-doc binfmt-support Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils cython3 debhelper dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libblas3 libcroco3 libdebhelper-perl libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libgfortran5 libglib2.0-0 libicu66 liblapack3 liblocale-gettext-perl libmagic-mgc libmagic1 libmpdec2 libpipeline1 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.8 libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db mime-support po-debconf python-pip-whl python3 python3-all python3-all-dev python3-atomicwrites python3-attr python3-dev python3-distutils python3-importlib-metadata python3-lib2to3 python3-minimal python3-more-itertools python3-numpy python3-packaging python3-pip python3-pkg-resources python3-pluggy python3-py python3-pyparsing python3-pytest python3-setuptools python3-six python3-wcwidth python3-wheel python3-zipp python3.8 python3.8-dev python3.8-minimal sbuild-build-depends-macs-dummy zlib1g-dev 0 upgraded, 80 newly installed, 0 to remove and 0 not upgraded. Need to get 39.3 MB of archives. After this operation, 158 MB of additional disk space will be used. Get:1 copy:/<>/resolver-ksswlj/apt_archive ./ sbuild-build-depends-macs-dummy 0.invalid.0 [912 B] Get:2 http://ftpmaster.internal/ubuntu groovy/main amd64 liblocale-gettext-perl amd64 1.07-4 [17.1 kB] Get:3 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libpython3.8-minimal amd64 3.8.4-1 [715 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/main amd64 libexpat1 amd64 2.2.9-1build1 [73.3 kB] Get:5 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 python3.8-minimal amd64 3.8.4-1 [1899 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-minimal amd64 3.8.2-0ubuntu2 [23.6 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main amd64 mime-support all 3.64ubuntu1 [30.6 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/main amd64 libmpdec2 amd64 2.4.2-3 [81.1 kB] Get:9 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libpython3.8-stdlib amd64 3.8.4-1 [1672 kB] Get:10 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 python3.8 amd64 3.8.4-1 [373 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main amd64 libpython3-stdlib amd64 3.8.2-0ubuntu2 [7068 B] Get:12 http://ftpmaster.internal/ubuntu groovy/main amd64 python3 amd64 3.8.2-0ubuntu2 [47.6 kB] Get:13 http://ftpmaster.internal/ubuntu groovy/main amd64 bsdextrautils amd64 2.35.2-7ubuntu3 [77.3 kB] Get:14 http://ftpmaster.internal/ubuntu groovy/main amd64 libuchardet0 amd64 0.0.7-1 [68.0 kB] Get:15 http://ftpmaster.internal/ubuntu groovy/main amd64 groff-base amd64 1.22.4-5 [847 kB] Get:16 http://ftpmaster.internal/ubuntu groovy/main amd64 libpipeline1 amd64 1.5.2-2build1 [27.7 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main amd64 man-db amd64 2.9.3-2 [1117 kB] Get:18 http://ftpmaster.internal/ubuntu groovy/main amd64 libmagic-mgc amd64 1:5.38-5 [218 kB] Get:19 http://ftpmaster.internal/ubuntu groovy/main amd64 libmagic1 amd64 1:5.38-5 [76.0 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main amd64 file amd64 1:5.38-5 [23.3 kB] Get:21 http://ftpmaster.internal/ubuntu groovy/main amd64 libelf1 amd64 0.176-1.1build1 [44.0 kB] Get:22 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libglib2.0-0 amd64 2.64.4-1 [1286 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main amd64 libicu66 amd64 66.1-2ubuntu3 [8515 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main amd64 libxml2 amd64 2.9.10+dfsg-5 [640 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-pkg-resources all 46.1.3-1 [127 kB] Get:26 http://ftpmaster.internal/ubuntu groovy/main amd64 gettext-base amd64 0.19.8.1-10build1 [50.2 kB] Get:27 http://ftpmaster.internal/ubuntu groovy/main amd64 libsigsegv2 amd64 2.12-2build1 [13.9 kB] Get:28 http://ftpmaster.internal/ubuntu groovy/main amd64 m4 amd64 1.4.18-4 [199 kB] Get:29 http://ftpmaster.internal/ubuntu groovy/main amd64 autoconf all 2.69-11.1 [321 kB] Get:30 http://ftpmaster.internal/ubuntu groovy/main amd64 autotools-dev all 20180224.1 [39.6 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main amd64 automake all 1:1.16.2-3ubuntu1 [548 kB] Get:32 http://ftpmaster.internal/ubuntu groovy/main amd64 autopoint all 0.19.8.1-10build1 [412 kB] Get:33 http://ftpmaster.internal/ubuntu groovy/universe amd64 cython3 amd64 0.29.14-0.1ubuntu3 [1474 kB] Get:34 http://ftpmaster.internal/ubuntu groovy/main amd64 libtool all 2.4.6-14 [161 kB] Get:35 http://ftpmaster.internal/ubuntu groovy/main amd64 dh-autoreconf all 19 [16.1 kB] Get:36 http://ftpmaster.internal/ubuntu groovy/main amd64 libdebhelper-perl all 13.2ubuntu1 [64.2 kB] Get:37 http://ftpmaster.internal/ubuntu groovy/main amd64 libarchive-zip-perl all 1.68-1 [90.2 kB] Get:38 http://ftpmaster.internal/ubuntu groovy/main amd64 libsub-override-perl all 0.09-2 [9532 B] Get:39 http://ftpmaster.internal/ubuntu groovy/main amd64 libfile-stripnondeterminism-perl all 1.9.0-1 [17.2 kB] Get:40 http://ftpmaster.internal/ubuntu groovy/main amd64 dh-strip-nondeterminism all 1.9.0-1 [5192 B] Get:41 http://ftpmaster.internal/ubuntu groovy/main amd64 dwz amd64 0.13-5 [151 kB] Get:42 http://ftpmaster.internal/ubuntu groovy/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB] Get:43 http://ftpmaster.internal/ubuntu groovy/main amd64 gettext amd64 0.19.8.1-10build1 [895 kB] Get:44 http://ftpmaster.internal/ubuntu groovy/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:45 http://ftpmaster.internal/ubuntu groovy/main amd64 po-debconf all 1.0.21 [233 kB] Get:46 http://ftpmaster.internal/ubuntu groovy/main amd64 debhelper all 13.2ubuntu1 [878 kB] Get:47 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 python3-lib2to3 all 3.8.4-1 [75.6 kB] Get:48 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 python3-distutils all 3.8.4-1 [141 kB] Get:49 http://ftpmaster.internal/ubuntu groovy/universe amd64 dh-python all 4.20200315ubuntu1 [85.8 kB] Get:50 http://ftpmaster.internal/ubuntu groovy/universe amd64 help2man amd64 1.47.16 [173 kB] Get:51 http://ftpmaster.internal/ubuntu groovy/main amd64 libblas3 amd64 3.9.0-2 [141 kB] Get:52 http://ftpmaster.internal/ubuntu groovy/main amd64 libexpat1-dev amd64 2.2.9-1build1 [116 kB] Get:53 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libgfortran5 amd64 10.1.0-6ubuntu1 [736 kB] Get:54 http://ftpmaster.internal/ubuntu groovy/main amd64 liblapack3 amd64 3.9.0-2 [2156 kB] Get:55 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libpython3.8 amd64 3.8.4-1 [1625 kB] Get:56 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 libpython3.8-dev amd64 3.8.4-1 [3945 kB] Get:57 http://ftpmaster.internal/ubuntu groovy/main amd64 libpython3-dev amd64 3.8.2-0ubuntu2 [7236 B] Get:58 http://ftpmaster.internal/ubuntu groovy/main amd64 libpython3-all-dev amd64 3.8.2-0ubuntu2 [1116 B] Get:59 http://ftpmaster.internal/ubuntu groovy/universe amd64 python-pip-whl all 20.1.1-2 [1842 kB] Get:60 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-all amd64 3.8.2-0ubuntu2 [1104 B] Get:61 http://ftpmaster.internal/ubuntu groovy/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2ubuntu1 [156 kB] Get:62 http://ftpmaster.internal/ubuntu groovy-proposed/main amd64 python3.8-dev amd64 3.8.4-1 [514 kB] Get:63 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-dev amd64 3.8.2-0ubuntu2 [1212 B] Get:64 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-all-dev amd64 3.8.2-0ubuntu2 [1112 B] Get:65 http://ftpmaster.internal/ubuntu groovy/universe amd64 python3-atomicwrites all 1.4.0-1 [10.2 kB] Get:66 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-attr all 19.3.0-5 [33.8 kB] Get:67 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-six all 1.15.0-1 [12.0 kB] Get:68 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-more-itertools all 4.2.0-3 [39.8 kB] Get:69 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-zipp all 1.0.0-3 [5440 B] Get:70 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-importlib-metadata all 1.6.0-2 [10.3 kB] Get:71 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-numpy amd64 1:1.18.4-1ubuntu1 [2777 kB] Get:72 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-pyparsing all 2.4.7-1 [61.4 kB] Get:73 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-packaging all 20.3-1.2 [26.9 kB] Get:74 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-setuptools all 46.1.3-1 [325 kB] Get:75 http://ftpmaster.internal/ubuntu groovy/universe amd64 python3-wheel all 0.34.2-1 [23.8 kB] Get:76 http://ftpmaster.internal/ubuntu groovy/universe amd64 python3-pip all 20.1.1-2 [247 kB] Get:77 http://ftpmaster.internal/ubuntu groovy/universe amd64 python3-pluggy all 0.13.0-5 [18.6 kB] Get:78 http://ftpmaster.internal/ubuntu groovy/universe amd64 python3-py all 1.8.1-3 [65.4 kB] Get:79 http://ftpmaster.internal/ubuntu groovy/main amd64 python3-wcwidth all 0.1.9+dfsg1-2 [17.7 kB] Get:80 http://ftpmaster.internal/ubuntu groovy/universe amd64 python3-pytest all 4.6.11-1 [178 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 39.3 MB in 1s (50.5 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 12829 files and directories currently installed.) Preparing to unpack .../liblocale-gettext-perl_1.07-4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4) ... Selecting previously unselected package libpython3.8-minimal:amd64. Preparing to unpack .../libpython3.8-minimal_3.8.4-1_amd64.deb ... Unpacking libpython3.8-minimal:amd64 (3.8.4-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.2.9-1build1_amd64.deb ... Unpacking libexpat1:amd64 (2.2.9-1build1) ... Selecting previously unselected package python3.8-minimal. Preparing to unpack .../python3.8-minimal_3.8.4-1_amd64.deb ... Unpacking python3.8-minimal (3.8.4-1) ... Setting up libpython3.8-minimal:amd64 (3.8.4-1) ... Setting up libexpat1:amd64 (2.2.9-1build1) ... Setting up python3.8-minimal (3.8.4-1) ... Selecting previously unselected package python3-minimal. (Reading database ... 13134 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.8.2-0ubuntu2_amd64.deb ... Unpacking python3-minimal (3.8.2-0ubuntu2) ... Selecting previously unselected package mime-support. Preparing to unpack .../1-mime-support_3.64ubuntu1_all.deb ... Unpacking mime-support (3.64ubuntu1) ... Selecting previously unselected package libmpdec2:amd64. Preparing to unpack .../2-libmpdec2_2.4.2-3_amd64.deb ... Unpacking libmpdec2:amd64 (2.4.2-3) ... Selecting previously unselected package libpython3.8-stdlib:amd64. Preparing to unpack .../3-libpython3.8-stdlib_3.8.4-1_amd64.deb ... Unpacking libpython3.8-stdlib:amd64 (3.8.4-1) ... Selecting previously unselected package python3.8. Preparing to unpack .../4-python3.8_3.8.4-1_amd64.deb ... Unpacking python3.8 (3.8.4-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../5-libpython3-stdlib_3.8.2-0ubuntu2_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.8.2-0ubuntu2) ... Setting up python3-minimal (3.8.2-0ubuntu2) ... Selecting previously unselected package python3. (Reading database ... 13536 files and directories currently installed.) Preparing to unpack .../00-python3_3.8.2-0ubuntu2_amd64.deb ... Unpacking python3 (3.8.2-0ubuntu2) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../01-bsdextrautils_2.35.2-7ubuntu3_amd64.deb ... Unpacking bsdextrautils (2.35.2-7ubuntu3) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.2-2build1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2build1) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.9.3-2_amd64.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.38-5_amd64.deb ... Unpacking libmagic-mgc (1:5.38-5) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../07-libmagic1_1%3a5.38-5_amd64.deb ... Unpacking libmagic1:amd64 (1:5.38-5) ... Selecting previously unselected package file. Preparing to unpack .../08-file_1%3a5.38-5_amd64.deb ... Unpacking file (1:5.38-5) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../09-libelf1_0.176-1.1build1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1.1build1) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../10-libglib2.0-0_2.64.4-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.64.4-1) ... Selecting previously unselected package libicu66:amd64. Preparing to unpack .../11-libicu66_66.1-2ubuntu3_amd64.deb ... Unpacking libicu66:amd64 (66.1-2ubuntu3) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../12-libxml2_2.9.10+dfsg-5_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-5) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../13-python3-pkg-resources_46.1.3-1_all.deb ... Unpacking python3-pkg-resources (46.1.3-1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../14-gettext-base_0.19.8.1-10build1_amd64.deb ... Unpacking gettext-base (0.19.8.1-10build1) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../15-libsigsegv2_2.12-2build1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2build1) ... Selecting previously unselected package m4. Preparing to unpack .../16-m4_1.4.18-4_amd64.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../17-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../18-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../19-automake_1%3a1.16.2-3ubuntu1_all.deb ... Unpacking automake (1:1.16.2-3ubuntu1) ... Selecting previously unselected package autopoint. Preparing to unpack .../20-autopoint_0.19.8.1-10build1_all.deb ... Unpacking autopoint (0.19.8.1-10build1) ... Selecting previously unselected package cython3. Preparing to unpack .../21-cython3_0.29.14-0.1ubuntu3_amd64.deb ... Unpacking cython3 (0.29.14-0.1ubuntu3) ... Selecting previously unselected package libtool. Preparing to unpack .../22-libtool_2.4.6-14_all.deb ... Unpacking libtool (2.4.6-14) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../23-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../24-libdebhelper-perl_13.2ubuntu1_all.deb ... Unpacking libdebhelper-perl (13.2ubuntu1) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../25-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../26-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../27-libfile-stripnondeterminism-perl_1.9.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.9.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../28-dh-strip-nondeterminism_1.9.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.9.0-1) ... Selecting previously unselected package dwz. Preparing to unpack .../29-dwz_0.13-5_amd64.deb ... Unpacking dwz (0.13-5) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../30-libcroco3_0.6.13-1_amd64.deb ... Unpacking libcroco3:amd64 (0.6.13-1) ... Selecting previously unselected package gettext. Preparing to unpack .../31-gettext_0.19.8.1-10build1_amd64.deb ... Unpacking gettext (0.19.8.1-10build1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../32-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../33-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../34-debhelper_13.2ubuntu1_all.deb ... Unpacking debhelper (13.2ubuntu1) ... Selecting previously unselected package python3-lib2to3. Preparing to unpack .../35-python3-lib2to3_3.8.4-1_all.deb ... Unpacking python3-lib2to3 (3.8.4-1) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../36-python3-distutils_3.8.4-1_all.deb ... Unpacking python3-distutils (3.8.4-1) ... Selecting previously unselected package dh-python. Preparing to unpack .../37-dh-python_4.20200315ubuntu1_all.deb ... Unpacking dh-python (4.20200315ubuntu1) ... Selecting previously unselected package help2man. Preparing to unpack .../38-help2man_1.47.16_amd64.deb ... Unpacking help2man (1.47.16) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../39-libblas3_3.9.0-2_amd64.deb ... Unpacking libblas3:amd64 (3.9.0-2) ... Selecting previously unselected package libexpat1-dev:amd64. Preparing to unpack .../40-libexpat1-dev_2.2.9-1build1_amd64.deb ... Unpacking libexpat1-dev:amd64 (2.2.9-1build1) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../41-libgfortran5_10.1.0-6ubuntu1_amd64.deb ... Unpacking libgfortran5:amd64 (10.1.0-6ubuntu1) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../42-liblapack3_3.9.0-2_amd64.deb ... Unpacking liblapack3:amd64 (3.9.0-2) ... Selecting previously unselected package libpython3.8:amd64. Preparing to unpack .../43-libpython3.8_3.8.4-1_amd64.deb ... Unpacking libpython3.8:amd64 (3.8.4-1) ... Selecting previously unselected package libpython3.8-dev:amd64. Preparing to unpack .../44-libpython3.8-dev_3.8.4-1_amd64.deb ... Unpacking libpython3.8-dev:amd64 (3.8.4-1) ... Selecting previously unselected package libpython3-dev:amd64. Preparing to unpack .../45-libpython3-dev_3.8.2-0ubuntu2_amd64.deb ... Unpacking libpython3-dev:amd64 (3.8.2-0ubuntu2) ... Selecting previously unselected package libpython3-all-dev:amd64. Preparing to unpack .../46-libpython3-all-dev_3.8.2-0ubuntu2_amd64.deb ... Unpacking libpython3-all-dev:amd64 (3.8.2-0ubuntu2) ... Selecting previously unselected package python-pip-whl. Preparing to unpack .../47-python-pip-whl_20.1.1-2_all.deb ... Unpacking python-pip-whl (20.1.1-2) ... Selecting previously unselected package python3-all. Preparing to unpack .../48-python3-all_3.8.2-0ubuntu2_amd64.deb ... Unpacking python3-all (3.8.2-0ubuntu2) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../49-zlib1g-dev_1%3a1.2.11.dfsg-2ubuntu1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.2.11.dfsg-2ubuntu1) ... Selecting previously unselected package python3.8-dev. Preparing to unpack .../50-python3.8-dev_3.8.4-1_amd64.deb ... Unpacking python3.8-dev (3.8.4-1) ... Selecting previously unselected package python3-dev. Preparing to unpack .../51-python3-dev_3.8.2-0ubuntu2_amd64.deb ... Unpacking python3-dev (3.8.2-0ubuntu2) ... Selecting previously unselected package python3-all-dev. Preparing to unpack .../52-python3-all-dev_3.8.2-0ubuntu2_amd64.deb ... Unpacking python3-all-dev (3.8.2-0ubuntu2) ... Selecting previously unselected package python3-atomicwrites. Preparing to unpack .../53-python3-atomicwrites_1.4.0-1_all.deb ... Unpacking python3-atomicwrites (1.4.0-1) ... Selecting previously unselected package python3-attr. Preparing to unpack .../54-python3-attr_19.3.0-5_all.deb ... Unpacking python3-attr (19.3.0-5) ... Selecting previously unselected package python3-six. Preparing to unpack .../55-python3-six_1.15.0-1_all.deb ... Unpacking python3-six (1.15.0-1) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../56-python3-more-itertools_4.2.0-3_all.deb ... Unpacking python3-more-itertools (4.2.0-3) ... Selecting previously unselected package python3-zipp. Preparing to unpack .../57-python3-zipp_1.0.0-3_all.deb ... Unpacking python3-zipp (1.0.0-3) ... Selecting previously unselected package python3-importlib-metadata. Preparing to unpack .../58-python3-importlib-metadata_1.6.0-2_all.deb ... Unpacking python3-importlib-metadata (1.6.0-2) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../59-python3-numpy_1%3a1.18.4-1ubuntu1_amd64.deb ... Unpacking python3-numpy (1:1.18.4-1ubuntu1) ... Selecting previously unselected package python3-pyparsing. Preparing to unpack .../60-python3-pyparsing_2.4.7-1_all.deb ... Unpacking python3-pyparsing (2.4.7-1) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../61-python3-packaging_20.3-1.2_all.deb ... Unpacking python3-packaging (20.3-1.2) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../62-python3-setuptools_46.1.3-1_all.deb ... Unpacking python3-setuptools (46.1.3-1) ... Selecting previously unselected package python3-wheel. Preparing to unpack .../63-python3-wheel_0.34.2-1_all.deb ... Unpacking python3-wheel (0.34.2-1) ... Selecting previously unselected package python3-pip. Preparing to unpack .../64-python3-pip_20.1.1-2_all.deb ... Unpacking python3-pip (20.1.1-2) ... Selecting previously unselected package python3-pluggy. Preparing to unpack .../65-python3-pluggy_0.13.0-5_all.deb ... Unpacking python3-pluggy (0.13.0-5) ... Selecting previously unselected package python3-py. Preparing to unpack .../66-python3-py_1.8.1-3_all.deb ... Unpacking python3-py (1.8.1-3) ... Selecting previously unselected package python3-wcwidth. Preparing to unpack .../67-python3-wcwidth_0.1.9+dfsg1-2_all.deb ... Unpacking python3-wcwidth (0.1.9+dfsg1-2) ... Selecting previously unselected package python3-pytest. Preparing to unpack .../68-python3-pytest_4.6.11-1_all.deb ... Unpacking python3-pytest (4.6.11-1) ... Selecting previously unselected package sbuild-build-depends-macs-dummy. Preparing to unpack .../69-sbuild-build-depends-macs-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-macs-dummy (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.2-2build1) ... Setting up mime-support (3.64ubuntu1) ... Setting up bsdextrautils (2.35.2-7ubuntu3) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libmagic-mgc (1:5.38-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:amd64 (2.64.4-1) ... No schema files found: doing nothing. Setting up libicu66:amd64 (66.1-2ubuntu3) ... Setting up libdebhelper-perl (13.2ubuntu1) ... Setting up libmagic1:amd64 (1:5.38-5) ... Setting up gettext-base (0.19.8.1-10build1) ... Setting up file (1:5.38-5) ... Setting up autotools-dev (20180224.1) ... Setting up libblas3:amd64 (3.9.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libexpat1-dev:amd64 (2.2.9-1build1) ... Setting up libsigsegv2:amd64 (2.12-2build1) ... Setting up autopoint (0.19.8.1-10build1) ... Setting up libgfortran5:amd64 (10.1.0-6ubuntu1) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-2ubuntu1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up python-pip-whl (20.1.1-2) ... Setting up libmpdec2:amd64 (2.4.2-3) ... Setting up libpython3.8-stdlib:amd64 (3.8.4-1) ... Setting up python3.8 (3.8.4-1) ... Setting up libelf1:amd64 (0.176-1.1build1) ... Setting up libxml2:amd64 (2.9.10+dfsg-5) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up libpython3-stdlib:amd64 (3.8.2-0ubuntu2) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up liblapack3:amd64 (3.9.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libtool (2.4.6-14) ... Setting up m4 (1.4.18-4) ... Setting up python3 (3.8.2-0ubuntu2) ... Setting up python3-wheel (0.34.2-1) ... Setting up python3-atomicwrites (1.4.0-1) ... Setting up help2man (1.47.16) ... Setting up python3-six (1.15.0-1) ... Setting up python3-wcwidth (0.1.9+dfsg1-2) ... Setting up python3-pyparsing (2.4.7-1) ... Setting up libpython3.8:amd64 (3.8.4-1) ... Setting up cython3 (0.29.14-0.1ubuntu3) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up python3-lib2to3 (3.8.4-1) ... Setting up python3-pkg-resources (46.1.3-1) ... Setting up automake (1:1.16.2-3ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3-distutils (3.8.4-1) ... Setting up dh-python (4.20200315ubuntu1) ... Setting up python3-more-itertools (4.2.0-3) ... Setting up python3-attr (19.3.0-5) ... Setting up gettext (0.19.8.1-10build1) ... Setting up python3-setuptools (46.1.3-1) ... Setting up python3-py (1.8.1-3) ... Setting up python3-all (3.8.2-0ubuntu2) ... Setting up python3-zipp (1.0.0-3) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up python3-packaging (20.3-1.2) ... Setting up libpython3.8-dev:amd64 (3.8.4-1) ... Setting up python3-pip (20.1.1-2) ... Setting up python3-numpy (1:1.18.4-1ubuntu1) ... Setting up python3.8-dev (3.8.4-1) ... Setting up libpython3-dev:amd64 (3.8.2-0ubuntu2) ... Setting up python3-importlib-metadata (1.6.0-2) ... Setting up po-debconf (1.0.21) ... Setting up libpython3-all-dev:amd64 (3.8.2-0ubuntu2) ... Setting up python3-dev (3.8.2-0ubuntu2) ... Setting up python3-pluggy (0.13.0-5) ... Setting up python3-all-dev (3.8.2-0ubuntu2) ... Setting up python3-pytest (4.6.11-1) ... Setting up dh-autoreconf (19) ... Setting up debhelper (13.2ubuntu1) ... Setting up sbuild-build-depends-macs-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.31-0ubuntu10) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-185-generic amd64 (x86_64) Toolchain package versions: binutils_2.34.90.20200706-1ubuntu1 dpkg-dev_1.19.7ubuntu4 g++-9_9.3.0-15ubuntu1 gcc-9_9.3.0-15ubuntu1 libc6-dev_2.31-0ubuntu10 libstdc++-9-dev_9.3.0-15ubuntu1 libstdc++6_10.1.0-6ubuntu1 linux-libc-dev_5.4.0-40.44 Package versions: adduser_3.118ubuntu2 advancecomp_2.1-2.1build1 apt_2.1.7 autoconf_2.69-11.1 automake_1:1.16.2-3ubuntu1 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu9 base-passwd_3.5.47 bash_5.0-6ubuntu2 binutils_2.34.90.20200706-1ubuntu1 binutils-common_2.34.90.20200706-1ubuntu1 binutils-x86-64-linux-gnu_2.34.90.20200706-1ubuntu1 bsdextrautils_2.35.2-7ubuntu3 bsdutils_1:2.35.2-7ubuntu3 build-essential_12.8ubuntu3 bzip2_1.0.8-3ubuntu1 ca-certificates_20190110ubuntu2 coreutils_8.30-3ubuntu3 cpp_4:9.3.0-1ubuntu2 cpp-9_9.3.0-15ubuntu1 cython3_0.29.14-0.1ubuntu3 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2ubuntu1 debianutils_4.11 dh-autoreconf_19 dh-python_4.20200315ubuntu1 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3build1 dpkg_1.19.7ubuntu4 dpkg-dev_1.19.7ubuntu4 dwz_0.13-5 e2fsprogs_1.45.6-1ubuntu1 fakeroot_1.24-1 fdisk_2.35.2-7ubuntu3 file_1:5.38-5 findutils_4.7.0-1ubuntu1 g++_4:9.3.0-1ubuntu2 g++-9_9.3.0-15ubuntu1 gcc_4:9.3.0-1ubuntu2 gcc-10-base_10.1.0-6ubuntu1 gcc-9_9.3.0-15ubuntu1 gcc-9-base_9.3.0-15ubuntu1 gettext_0.19.8.1-10build1 gettext-base_0.19.8.1-10build1 gpg_2.2.20-1ubuntu1 gpg-agent_2.2.20-1ubuntu1 gpgconf_2.2.20-1ubuntu1 gpgv_2.2.20-1ubuntu1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2ubuntu1 help2man_1.47.16 hostname_3.23 init_1.58 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapparmor1_2.13.3-7ubuntu6 libapt-pkg6.0_2.1.7 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2build20.10.0 libasan5_9.3.0-15ubuntu1 libassuan0_2.5.3-7.1 libatomic1_10.1.0-6ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2ubuntu6 libaudit1_1:2.8.5-2ubuntu6 libbinutils_2.34.90.20200706-1ubuntu1 libblas3_3.9.0-2 libblkid1_2.35.2-7ubuntu3 libbz2-1.0_1.0.8-3ubuntu1 libc-bin_2.31-0ubuntu10 libc-dev-bin_2.31-0ubuntu10 libc6_2.31-0ubuntu10 libc6-dev_2.31-0ubuntu10 libcap-ng0_0.7.9-2.2 libcap2_1:2.36-1 libcc1-0_10.1.0-6ubuntu1 libcom-err2_1.45.6-1ubuntu1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1ubuntu1 libcrypt1_1:4.4.16-1ubuntu1 libcryptsetup12_2:2.3.3-1ubuntu3 libctf-nobfd0_2.34.90.20200706-1ubuntu1 libctf0_2.34.90.20200706-1ubuntu1 libdb5.3_5.3.28+dfsg1-0.6ubuntu2 libdebconfclient0_0.252ubuntu1 libdebhelper-perl_13.2ubuntu1 libdevmapper1.02.1_2:1.02.167-1ubuntu3 libdpkg-perl_1.19.7ubuntu4 libelf1_0.176-1.1build1 libexpat1_2.2.9-1build1 libexpat1-dev_2.2.9-1build1 libext2fs2_1.45.6-1ubuntu1 libfakeroot_1.24-1 libfdisk1_2.35.2-7ubuntu3 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-9-dev_9.3.0-15ubuntu1 libgcc-s1_10.1.0-6ubuntu1 libgcrypt20_1.8.5-5ubuntu2 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran5_10.1.0-6ubuntu1 libglib2.0-0_2.64.4-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.13-4ubuntu4 libgomp1_10.1.0-6ubuntu1 libgpg-error0_1.38-2 libhogweed5_3.5.1+really3.5.1-2 libhogweed6_3.6-2 libicu66_66.1-2ubuntu3 libidn2-0_2.3.0-1 libip4tc2_1.8.4-3ubuntu2 libisl22_0.22.1-1 libitm1_10.1.0-6ubuntu1 libjson-c4_0.13.1+dfsg-9 libkmod2_27+20200310-2ubuntu1 liblapack3_3.9.0-2 liblocale-gettext-perl_1.07-4 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblsan0_10.1.0-6ubuntu1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1ubuntu1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.35.2-7ubuntu3 libmpc3_1.1.0-1 libmpdec2_2.4.2-3 libmpfr6_4.1.0-3 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle7_3.5.1+really3.5.1-2 libnettle8_3.6-2 libnpth0_1.6-2 libp11-kit0_0.23.20-1build1 libpam-modules_1.3.1-5ubuntu5 libpam-modules-bin_1.3.1-5ubuntu5 libpam-runtime_1.3.1-5ubuntu5 libpam0g_1.3.1-5ubuntu5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libpipeline1_1.5.2-2build1 libpng16-16_1.6.37-2 libprocps8_2:3.3.16-5ubuntu1 libpython3-all-dev_3.8.2-0ubuntu2 libpython3-dev_3.8.2-0ubuntu2 libpython3-stdlib_3.8.2-0ubuntu2 libpython3.8_3.8.4-1 libpython3.8-dev_3.8.4-1 libpython3.8-minimal_3.8.4-1 libpython3.8-stdlib_3.8.4-1 libquadmath0_10.1.0-6ubuntu1 libreadline8_8.0-4 libseccomp2_2.4.3-1ubuntu4 libselinux1_3.1-1 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigsegv2_2.12-2build1 libsmartcols1_2.35.2-7ubuntu3 libsqlite3-0_3.32.3-1 libss2_1.45.6-1ubuntu1 libssl1.1_1.1.1f-1ubuntu3 libstdc++-9-dev_9.3.0-15ubuntu1 libstdc++6_10.1.0-6ubuntu1 libsub-override-perl_0.09-2 libsystemd0_245.6-3ubuntu2 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10.1.0-6ubuntu1 libubsan1_10.1.0-6ubuntu1 libuchardet0_0.0.7-1 libudev1_245.6-3ubuntu2 libunistring2_0.9.10-4 libuuid1_2.35.2-7ubuntu3 libxml2_2.9.10+dfsg-5 libzstd1_1.4.5+dfsg-3 linux-libc-dev_5.4.0-40.44 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu6 logsave_1.45.6-1ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.3-4ubuntu1 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mime-support_3.64ubuntu1 mount_2.35.2-7ubuntu3 ncurses-base_6.2-1 ncurses-bin_6.2-1 openssl_1.1.1f-1ubuntu3 optipng_0.7.7-1 passwd_1:4.8.1-1ubuntu6 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.30_5.30.3-4 pinentry-curses_1.1.0-4build1 pkgbinarymangler_146 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-5ubuntu1 python-pip-whl_20.1.1-2 python3_3.8.2-0ubuntu2 python3-all_3.8.2-0ubuntu2 python3-all-dev_3.8.2-0ubuntu2 python3-atomicwrites_1.4.0-1 python3-attr_19.3.0-5 python3-dev_3.8.2-0ubuntu2 python3-distutils_3.8.4-1 python3-importlib-metadata_1.6.0-2 python3-lib2to3_3.8.4-1 python3-minimal_3.8.2-0ubuntu2 python3-more-itertools_4.2.0-3 python3-numpy_1:1.18.4-1ubuntu1 python3-packaging_20.3-1.2 python3-pip_20.1.1-2 python3-pkg-resources_46.1.3-1 python3-pluggy_0.13.0-5 python3-py_1.8.1-3 python3-pyparsing_2.4.7-1 python3-pytest_4.6.11-1 python3-setuptools_46.1.3-1 python3-six_1.15.0-1 python3-wcwidth_0.1.9+dfsg1-2 python3-wheel_0.34.2-1 python3-zipp_1.0.0-3 python3.8_3.8.4-1 python3.8-dev_3.8.4-1 python3.8-minimal_3.8.4-1 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-macs-dummy_0.invalid.0 sed_4.7-1build1 sensible-utils_0.0.12+nmu1 systemd_245.6-3ubuntu2 systemd-sysv_245.6-3ubuntu2 systemd-timesyncd_245.6-3ubuntu2 sysvinit-utils_2.96-3ubuntu1 tar_1.30+dfsg-7 tzdata_2020a-0ubuntu1 ubuntu-keyring_2020.06.17.1 util-linux_2.35.2-7ubuntu3 xz-utils_5.2.4-1ubuntu1 zlib1g_1:1.2.11.dfsg-2ubuntu1 zlib1g-dev_1:1.2.11.dfsg-2ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Wed Jul 15 21:48:48 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./macs_2.2.7.1-3.dsc dpkg-source: info: extracting macs in macs-2.2.7.1 dpkg-source: info: unpacking macs_2.2.7.1.orig.tar.gz dpkg-source: info: unpacking macs_2.2.7.1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling dpkg-source: info: applying keep_debug dpkg-source: info: applying link-libm.patch dpkg-source: info: applying no-pip.patch Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-19595984 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-19595984 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-19595984 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package macs dpkg-buildpackage: info: source version 2.2.7.1-3 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from macs-2.2.7.1/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/ debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean || true I: pybuild base:217: python3.8 setup.py clean running clean removing '/<>/.pybuild/cpython3_3.8_MACS2/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.8' does not exist -- can't clean it rm -Rf test/macs2.2.7.1-3* test/speedtest* rm -f debian/*.1 debian/*-man-include make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:217: python3.8 setup.py config running config debian/rules override_dh_auto_build make[1]: Entering directory '/<>' for pyx in $(find MACS2/ -name "*.pyx"); do \ rm -f ${pyx%%.pyx}.{h,c}; touch ${pyx}; done dh_auto_build I: pybuild base:217: /usr/bin/python3 setup.py build running build running build_py creating /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/randsample_cmd.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/pileup_cmd.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/bdgbroadcall_cmd.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/OutputWriter.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/OptValidator.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/__init__.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/bdgcmp_cmd.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/diffpeak_cmd.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/bdgpeakcall_cmd.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/callpeak_cmd.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/cmbreps_cmd.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/refinepeak_cmd.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/bdgdiff_cmd.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/predictd_cmd.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/bdgopt_cmd.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/Constants.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/filterdup_cmd.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 creating /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO copying MACS2/IO/__init__.py -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO copying MACS2/khash.pxd -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 copying MACS2/cPosValCalculation.pxd -> /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2 running build_ext cythoning MACS2/Prob.pyx to MACS2/Prob.c cythoning MACS2/IO/Parser.pyx to MACS2/IO/Parser.c cythoning MACS2/Pileup.pyx to MACS2/Pileup.c cythoning MACS2/PeakModel.pyx to MACS2/PeakModel.c cythoning MACS2/PeakDetect.pyx to MACS2/PeakDetect.c cythoning MACS2/Signal.pyx to MACS2/Signal.c cythoning MACS2/IO/PeakIO.pyx to MACS2/IO/PeakIO.c cythoning MACS2/IO/BedGraphIO.pyx to MACS2/IO/BedGraphIO.c cythoning MACS2/IO/FixWidthTrack.pyx to MACS2/IO/FixWidthTrack.c cythoning MACS2/IO/PairedEndTrack.pyx to MACS2/IO/PairedEndTrack.c cythoning MACS2/IO/BedGraph.pyx to MACS2/IO/BedGraph.c cythoning MACS2/IO/ScoreTrack.pyx to MACS2/IO/ScoreTrack.c cythoning MACS2/IO/CallPeakUnit.pyx to MACS2/IO/CallPeakUnit.c building 'MACS2.Prob' extension creating build creating build/temp.linux-x86_64-3.8 creating build/temp.linux-x86_64-3.8/MACS2 x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c MACS2/Prob.c -o build/temp.linux-x86_64-3.8/MACS2/Prob.o -w -O3 -ffast-math x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/MACS2/Prob.o -lm -o /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/Prob.cpython-38-x86_64-linux-gnu.so building 'MACS2.IO.Parser' extension creating build/temp.linux-x86_64-3.8/MACS2/IO x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c MACS2/IO/Parser.c -o build/temp.linux-x86_64-3.8/MACS2/IO/Parser.o -w -O3 -ffast-math x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/MACS2/IO/Parser.o -o /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/Parser.cpython-38-x86_64-linux-gnu.so building 'MACS2.Pileup' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c MACS2/Pileup.c -o build/temp.linux-x86_64-3.8/MACS2/Pileup.o -w -O3 -ffast-math x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c MACS2/cPosValCalculation.c -o build/temp.linux-x86_64-3.8/MACS2/cPosValCalculation.o -w -O3 -ffast-math x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/MACS2/Pileup.o build/temp.linux-x86_64-3.8/MACS2/cPosValCalculation.o -o /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/Pileup.cpython-38-x86_64-linux-gnu.so building 'MACS2.PeakModel' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c MACS2/PeakModel.c -o build/temp.linux-x86_64-3.8/MACS2/PeakModel.o -w -O3 -ffast-math x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/MACS2/PeakModel.o -o /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/PeakModel.cpython-38-x86_64-linux-gnu.so building 'MACS2.PeakDetect' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.8 -c MACS2/PeakDetect.c -o build/temp.linux-x86_64-3.8/MACS2/PeakDetect.o -w -O3 -ffast-math x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/MACS2/PeakDetect.o -o /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/PeakDetect.cpython-38-x86_64-linux-gnu.so building 'MACS2.Signal' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c MACS2/Signal.c -o build/temp.linux-x86_64-3.8/MACS2/Signal.o -w -O3 -ffast-math x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/MACS2/Signal.o -o /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/Signal.cpython-38-x86_64-linux-gnu.so building 'MACS2.IO.PeakIO' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.8 -c MACS2/IO/PeakIO.c -o build/temp.linux-x86_64-3.8/MACS2/IO/PeakIO.o -w -O3 -ffast-math x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/MACS2/IO/PeakIO.o -o /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/PeakIO.cpython-38-x86_64-linux-gnu.so building 'MACS2.IO.BedGraphIO' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.8 -c MACS2/IO/BedGraphIO.c -o build/temp.linux-x86_64-3.8/MACS2/IO/BedGraphIO.o -w -O3 -ffast-math x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/MACS2/IO/BedGraphIO.o -o /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/BedGraphIO.cpython-38-x86_64-linux-gnu.so building 'MACS2.IO.FixWidthTrack' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c MACS2/IO/FixWidthTrack.c -o build/temp.linux-x86_64-3.8/MACS2/IO/FixWidthTrack.o -w -O3 -ffast-math x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/MACS2/IO/FixWidthTrack.o -o /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/FixWidthTrack.cpython-38-x86_64-linux-gnu.so building 'MACS2.IO.PairedEndTrack' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c MACS2/IO/PairedEndTrack.c -o build/temp.linux-x86_64-3.8/MACS2/IO/PairedEndTrack.o -w -O3 -ffast-math x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/MACS2/IO/PairedEndTrack.o -o /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/PairedEndTrack.cpython-38-x86_64-linux-gnu.so building 'MACS2.IO.BedGraph' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.8 -c MACS2/IO/BedGraph.c -o build/temp.linux-x86_64-3.8/MACS2/IO/BedGraph.o -w -O3 -ffast-math x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/MACS2/IO/BedGraph.o -lm -o /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/BedGraph.cpython-38-x86_64-linux-gnu.so building 'MACS2.IO.ScoreTrack' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c MACS2/IO/ScoreTrack.c -o build/temp.linux-x86_64-3.8/MACS2/IO/ScoreTrack.o -w -O3 -ffast-math x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/MACS2/IO/ScoreTrack.o -lm -o /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/ScoreTrack.cpython-38-x86_64-linux-gnu.so building 'MACS2.IO.CallPeakUnit' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.8 -c MACS2/IO/CallPeakUnit.c -o build/temp.linux-x86_64-3.8/MACS2/IO/CallPeakUnit.o -w -O3 -ffast-math x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/MACS2/IO/CallPeakUnit.o -lm -o /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/CallPeakUnit.cpython-38-x86_64-linux-gnu.so running build_scripts creating build/scripts-3.8 copying and adjusting bin/macs2 -> build/scripts-3.8 changing mode of build/scripts-3.8/macs2 from 644 to 755 PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS2/build/ help2man \ --no-discard-stderr --no-info \ --name "macs2 \- Model\-based Analysis for ChIP\-Sequencing" "python3 bin/macs2" > debian/macs2.1 for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do printf \ "[NAME]\nmacs2_${subcommand} \- Model\-based Analysis for ChIP\-Sequencing\n" \ > debian/macs2_${subcommand}-man-include; done for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do \ PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS2/build/ help2man \ --no-discard-stderr --no-info --version-string="2.2.7.1" \ --include debian/macs2_${subcommand}-man-include \ "python3 bin/macs2 ${subcommand}" > \ debian/macs2_${subcommand}.1; done make[1]: Leaving directory '/<>' debian/rules override_dh_auto_test make[1]: Entering directory '/<>' dh_auto_test I: pybuild base:217: cd /<>/.pybuild/cpython3_3.8_MACS2/build; python3.8 -m pytest test ============================= test session starts ============================== platform linux -- Python 3.8.4, pytest-4.6.11, py-1.8.1, pluggy-0.13.0 rootdir: /<> collected 42 items test/test_BedGraph.py .... [ 9%] test/test_FixWidthTrack.py .... [ 19%] test/test_PairedEndTrack.py .... [ 28%] test/test_Parser.py ... [ 35%] test/test_PeakIO.py ... [ 42%] test/test_Pileup.py .. [ 47%] test/test_Prob.py ................ [ 85%] test/test_ScoreTrack.py .... [ 95%] test/test_Signal.py s. [100%] ===================== 41 passed, 1 skipped in 0.32 seconds ===================== cd test && for PY3VER in 3.8; do \ export PATH=/<>/build/scripts-${PY3VER}:$PATH \ && export PYTHONPATH=/<>/.pybuild/cpython3_${PY3VER}_MACS2/build \ && ./cmdlinetest macs2.2.7.1-3-${PY3VER} ; done 1. callpeak 1.1 callpeak narrow 1.2 callpeak broad 1.3 callpeak on PE narrow/broad 2. pileup 3. filterdup 4. predictd 5. randsample 6. refinepeak 7. bdgcmp 8. bdgpeakcall 9. bdgbroadcall 10. bdgdiff 11. cmbreps 12. bdgopt 13. 50k contigs with buffersize 13.1 callpeak 13.2 filterdup 13.3 pileup 13.4 randsample 14. search for errors or warnings in log files checking macs2.2.7.1-3-3.8_run_50kcontigs/run_callpeak_50kcontigs.log... ... clear! checking macs2.2.7.1-3-3.8_run_50kcontigs/run_filterdup_50kcontigs.log... ... clear! checking macs2.2.7.1-3-3.8_run_50kcontigs/run_pileup_ChIP.bed.log... ... clear! checking macs2.2.7.1-3-3.8_run_50kcontigs/run_randsample.log... ... clear! checking macs2.2.7.1-3-3.8_run_bdgbroadcall/run_bdgbroadcall_w_prefix.log... ... clear! checking macs2.2.7.1-3-3.8_run_bdgcmp/run_bdgcmp.log... ... clear! checking macs2.2.7.1-3-3.8_run_bdgdiff/run_bdgdiff_w_o_file.log... ... clear! checking macs2.2.7.1-3-3.8_run_bdgdiff/run_bdgdiff_w_prefix.log... ... clear! checking macs2.2.7.1-3-3.8_run_bdgopt/run_bdgopt_max.log... ... clear! checking macs2.2.7.1-3-3.8_run_bdgopt/run_bdgopt_min.log... ... clear! checking macs2.2.7.1-3-3.8_run_bdgpeakcall/run_bdgpeakcall_cutoff.log... ... clear! checking macs2.2.7.1-3-3.8_run_bdgpeakcall/run_bdgpeakcall_w_prefix.log... ... clear! checking macs2.2.7.1-3-3.8_run_callpeak_broad/run_callpeak_broad.log... ... clear! checking macs2.2.7.1-3-3.8_run_callpeak_narrow/run_callpeak_narrow0.log... ... clear! checking macs2.2.7.1-3-3.8_run_callpeak_narrow/run_callpeak_narrow1.log... ... clear! checking macs2.2.7.1-3-3.8_run_callpeak_narrow/run_callpeak_narrow2.log... ... clear! checking macs2.2.7.1-3-3.8_run_callpeak_narrow/run_callpeak_narrow3.log... ... clear! checking macs2.2.7.1-3-3.8_run_callpeak_narrow/run_callpeak_narrow4.log... ... clear! checking macs2.2.7.1-3-3.8_run_callpeak_narrow/run_callpeak_narrow5.log... ... clear! checking macs2.2.7.1-3-3.8_run_callpeak_narrow_revert/run_callpeak_narrow_revert.log... ... clear! checking macs2.2.7.1-3-3.8_run_callpeak_pe_broad/run_callpeak_bampe_broad.log... ... clear! checking macs2.2.7.1-3-3.8_run_callpeak_pe_broad/run_callpeak_bedpe_broad.log... ... clear! checking macs2.2.7.1-3-3.8_run_callpeak_pe_narrow/run_callpeak_bampe_narrow.log... ... clear! checking macs2.2.7.1-3-3.8_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow.log... ... clear! checking macs2.2.7.1-3-3.8_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip.log... ... clear! checking macs2.2.7.1-3-3.8_run_cmbreps/run_cmbreps_fisher.log... ... clear! checking macs2.2.7.1-3-3.8_run_cmbreps/run_cmbreps_max.log... ... clear! checking macs2.2.7.1-3-3.8_run_cmbreps/run_cmbreps_mean.log... ... clear! checking macs2.2.7.1-3-3.8_run_filterdup/run_filterdup.log... ... clear! checking macs2.2.7.1-3-3.8_run_filterdup/run_filterdup_d.log... ... clear! checking macs2.2.7.1-3-3.8_run_filterdup/run_filterdup_pe.log... ... clear! checking macs2.2.7.1-3-3.8_run_filterdup/run_filterdup_pe_d.log... ... clear! checking macs2.2.7.1-3-3.8_run_pileup/run_pileup_CTRL.bed.log... ... clear! checking macs2.2.7.1-3-3.8_run_pileup/run_pileup_CTRLPE.bampe.log... ... clear! checking macs2.2.7.1-3-3.8_run_pileup/run_pileup_CTRLPE.bedpe.log... ... clear! checking macs2.2.7.1-3-3.8_run_pileup/run_pileup_ChIP.bed.log... ... clear! checking macs2.2.7.1-3-3.8_run_pileup/run_pileup_ChIPPE.bampe.log... ... clear! checking macs2.2.7.1-3-3.8_run_pileup/run_pileup_ChIPPE.bedpe.log... ... clear! checking macs2.2.7.1-3-3.8_run_predictd/run_predictd.log... ... clear! checking macs2.2.7.1-3-3.8_run_randsample/run_randsample.log... ... clear! checking macs2.2.7.1-3-3.8_run_randsample/run_randsample_bampe.log... ... clear! checking macs2.2.7.1-3-3.8_run_randsample/run_randsample_bedpe.log... ... clear! checking macs2.2.7.1-3-3.8_run_refinepeak/run_refinepeak_w_ofile.log... ... clear! checking macs2.2.7.1-3-3.8_run_refinepeak/run_refinepeak_w_prefix.log... ... clear! 15. compare with standard outputs 14.1.1 checking 50kcontigs run_callpeak_50kcontigs_peaks.narrowPeak ... ... success! 14.1.2 checking 50kcontigs run_callpeak_50kcontigs_summits.bed ... ... success! 14.1.3 checking 50kcontigs run_filterdup_result.bed ... ... success! 14.1.4 checking 50kcontigs run_pileup_ChIP.bed.bdg ... ... success! 14.2.1 checking bdgbroadcall run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ... ... success! 14.3.1 checking bdgcmp run_bdgcmp_FE.bdg ... ... success! 14.3.2 checking bdgcmp run_bdgcmp_ppois.bdg ... ... success! 14.4.1 checking bdgdiff common.bed ... ... success! 14.4.2 checking bdgdiff cond1.bed ... ... success! 14.4.3 checking bdgdiff cond2.bed ... ... success! 14.4.4 checking bdgdiff run_bdgdiff_prefix_c3.0_common.bed ... ... success! 14.4.5 checking bdgdiff run_bdgdiff_prefix_c3.0_cond1.bed ... ... success! 14.4.6 checking bdgdiff run_bdgdiff_prefix_c3.0_cond2.bed ... ... success! 14.5.1 checking bdgpeakcall run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ... ... success! 14.6.1 checking callpeak_broad run_callpeak_broad_control_lambda.bdg ... ... success! 14.6.2 checking callpeak_broad run_callpeak_broad_peaks.broadPeak ... ... success! 14.6.3 checking callpeak_broad run_callpeak_broad_peaks.gappedPeak ... ... success! 14.6.4 checking callpeak_broad run_callpeak_broad_treat_pileup.bdg ... ... success! 14.7.1 checking callpeak_narrow run_callpeak_narrow0_control_lambda.bdg ... ... success! 14.7.2 checking callpeak_narrow run_callpeak_narrow0_peaks.narrowPeak ... ... success! 14.7.3 checking callpeak_narrow run_callpeak_narrow0_summits.bed ... ... success! 14.7.4 checking callpeak_narrow run_callpeak_narrow0_treat_pileup.bdg ... ... success! 14.7.5 checking callpeak_narrow run_callpeak_narrow1_control_lambda.bdg ... ... success! 14.7.6 checking callpeak_narrow run_callpeak_narrow1_peaks.narrowPeak ... ... success! 14.7.7 checking callpeak_narrow run_callpeak_narrow1_summits.bed ... ... success! 14.7.8 checking callpeak_narrow run_callpeak_narrow1_treat_pileup.bdg ... ... success! 14.7.9 checking callpeak_narrow run_callpeak_narrow2_control_lambda.bdg ... ... success! 14.7.10 checking callpeak_narrow run_callpeak_narrow2_peaks.narrowPeak ... ... success! 14.7.11 checking callpeak_narrow run_callpeak_narrow2_summits.bed ... ... success! 14.7.12 checking callpeak_narrow run_callpeak_narrow2_treat_pileup.bdg ... ... success! 14.7.13 checking callpeak_narrow run_callpeak_narrow3_control_lambda.bdg ... ... success! 14.7.14 checking callpeak_narrow run_callpeak_narrow3_peaks.narrowPeak ... ... success! 14.7.15 checking callpeak_narrow run_callpeak_narrow3_summits.bed ... ... success! 14.7.16 checking callpeak_narrow run_callpeak_narrow3_treat_pileup.bdg ... ... success! 14.7.17 checking callpeak_narrow run_callpeak_narrow4_control_lambda.bdg ... ... success! 14.7.18 checking callpeak_narrow run_callpeak_narrow4_peaks.narrowPeak ... ... success! 14.7.19 checking callpeak_narrow run_callpeak_narrow4_summits.bed ... ... success! 14.7.20 checking callpeak_narrow run_callpeak_narrow4_treat_pileup.bdg ... ... success! 14.7.21 checking callpeak_narrow run_callpeak_narrow5_control_lambda.bdg ... ... success! 14.7.22 checking callpeak_narrow run_callpeak_narrow5_peaks.narrowPeak ... ... success! 14.7.23 checking callpeak_narrow run_callpeak_narrow5_summits.bed ... ... success! 14.7.24 checking callpeak_narrow run_callpeak_narrow5_treat_pileup.bdg ... ... success! 14.8.1 checking callpeak_narrow_revert run_callpeak_narrow_revert_control_lambda.bdg ... ... success! 14.8.2 checking callpeak_narrow_revert run_callpeak_narrow_revert_peaks.narrowPeak ... ... success! 14.8.3 checking callpeak_narrow_revert run_callpeak_narrow_revert_summits.bed ... ... success! 14.8.4 checking callpeak_narrow_revert run_callpeak_narrow_revert_treat_pileup.bdg ... ... success! 14.9.1 checking callpeak_pe_broad run_callpeak_bampe_broad_control_lambda.bdg ... ... success! 14.9.2 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.broadPeak ... ... success! 14.9.3 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.gappedPeak ... ... success! 14.9.4 checking callpeak_pe_broad run_callpeak_bampe_broad_treat_pileup.bdg ... ... success! 14.9.5 checking callpeak_pe_broad run_callpeak_bedpe_broad_control_lambda.bdg ... ... success! 14.9.6 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.broadPeak ... ... success! 14.9.7 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.gappedPeak ... ... success! 14.9.8 checking callpeak_pe_broad run_callpeak_bedpe_broad_treat_pileup.bdg ... ... success! 14.10.1 checking callpeak_pe_narrow run_callpeak_bampe_narrow_control_lambda.bdg ... ... success! 14.10.2 checking callpeak_pe_narrow run_callpeak_bampe_narrow_peaks.narrowPeak ... ... success! 14.10.3 checking callpeak_pe_narrow run_callpeak_bampe_narrow_summits.bed ... ... success! 14.10.4 checking callpeak_pe_narrow run_callpeak_bampe_narrow_treat_pileup.bdg ... ... success! 14.10.5 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_control_lambda.bdg ... ... success! 14.10.6 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_peaks.narrowPeak ... ... success! 14.10.7 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_summits.bed ... ... success! 14.10.8 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_treat_pileup.bdg ... ... success! 14.10.9 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_control_lambda.bdg ... ... success! 14.10.10 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ... ... success! 14.10.11 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_summits.bed ... ... success! 14.10.12 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ... ... success! 14.11.1 checking cmbreps run_cmbreps_fisher.bdg ... ... success! 14.11.2 checking cmbreps run_cmbreps_max.bdg ... ... success! 14.11.3 checking cmbreps run_cmbreps_mean.bdg ... ... success! 14.12.1 checking filterdup run_filterdup_result.bed ... ... success! 14.12.2 checking filterdup run_filterdup_result_pe.bedpe ... ... success! 14.13.1 checking pileup run_pileup_CTRL.bed.bdg ... ... success! 14.13.2 checking pileup run_pileup_CTRLPE.bampe.bdg ... ... success! 14.13.3 checking pileup run_pileup_CTRLPE.bedpe.bdg ... ... success! 14.13.4 checking pileup run_pileup_ChIP.bed.bdg ... ... success! 14.13.5 checking pileup run_pileup_ChIPPE.bampe.bdg ... ... success! 14.13.6 checking pileup run_pileup_ChIPPE.bedpe.bdg ... ... success! 14.14.1 checking refinepeak run_refinepeak_w_ofile.bed ... ... success! 14.14.2 checking refinepeak run_refinepeak_w_prefix_refinepeak.bed ... ... success! 14.15.1 checking bdgopt run_bdgopt_max.bdg ... ... success! 14.15.2 checking bdgopt run_bdgopt_min.bdg ... ... success! 16. brief speed test CPU time (mm:ss): 00:01:25 Max mem (KB): 268908 make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:217: /usr/bin/python3 setup.py install --root /<>/debian/macs running install running build running build_py running build_ext skipping 'MACS2/Prob.c' Cython extension (up-to-date) skipping 'MACS2/IO/Parser.c' Cython extension (up-to-date) skipping 'MACS2/Pileup.c' Cython extension (up-to-date) skipping 'MACS2/PeakModel.c' Cython extension (up-to-date) skipping 'MACS2/PeakDetect.c' Cython extension (up-to-date) skipping 'MACS2/Signal.c' Cython extension (up-to-date) skipping 'MACS2/IO/PeakIO.c' Cython extension (up-to-date) skipping 'MACS2/IO/BedGraphIO.c' Cython extension (up-to-date) skipping 'MACS2/IO/FixWidthTrack.c' Cython extension (up-to-date) skipping 'MACS2/IO/PairedEndTrack.c' Cython extension (up-to-date) skipping 'MACS2/IO/BedGraph.c' Cython extension (up-to-date) skipping 'MACS2/IO/ScoreTrack.c' Cython extension (up-to-date) skipping 'MACS2/IO/CallPeakUnit.c' Cython extension (up-to-date) running build_scripts running install_lib creating /<>/debian/macs/usr creating /<>/debian/macs/usr/lib creating /<>/debian/macs/usr/lib/python3.8 creating /<>/debian/macs/usr/lib/python3.8/dist-packages creating /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/randsample_cmd.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/pileup_cmd.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/khash.pxd -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/bdgbroadcall_cmd.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/OutputWriter.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/PeakModel.cpython-38-x86_64-linux-gnu.so -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/OptValidator.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/PeakDetect.cpython-38-x86_64-linux-gnu.so -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__init__.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/Pileup.cpython-38-x86_64-linux-gnu.so -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/bdgcmp_cmd.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 creating /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__pycache__/bdgbroadcall_cmd.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__pycache__/OptValidator.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__pycache__/bdgcmp_cmd.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__pycache__/pileup_cmd.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__pycache__/bdgopt_cmd.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__pycache__/cmbreps_cmd.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__pycache__/predictd_cmd.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__pycache__/filterdup_cmd.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__pycache__/callpeak_cmd.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__pycache__/OutputWriter.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__pycache__/bdgdiff_cmd.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__pycache__/__init__.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__pycache__/Constants.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__pycache__/randsample_cmd.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__pycache__/bdgpeakcall_cmd.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/__pycache__/refinepeak_cmd.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/cPosValCalculation.pxd -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/diffpeak_cmd.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/bdgpeakcall_cmd.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/callpeak_cmd.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/cmbreps_cmd.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/Signal.cpython-38-x86_64-linux-gnu.so -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/Prob.cpython-38-x86_64-linux-gnu.so -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/refinepeak_cmd.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/bdgdiff_cmd.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/predictd_cmd.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/bdgopt_cmd.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 creating /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/IO copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/ScoreTrack.cpython-38-x86_64-linux-gnu.so -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/IO copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/Parser.cpython-38-x86_64-linux-gnu.so -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/IO copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/__init__.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/IO creating /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/IO/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/__pycache__/__init__.cpython-38.pyc -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/IO/__pycache__ copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/PeakIO.cpython-38-x86_64-linux-gnu.so -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/IO copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/PairedEndTrack.cpython-38-x86_64-linux-gnu.so -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/IO copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/BedGraphIO.cpython-38-x86_64-linux-gnu.so -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/IO copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/FixWidthTrack.cpython-38-x86_64-linux-gnu.so -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/IO copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/BedGraph.cpython-38-x86_64-linux-gnu.so -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/IO copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/IO/CallPeakUnit.cpython-38-x86_64-linux-gnu.so -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/IO copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/Constants.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 copying /<>/.pybuild/cpython3_3.8_MACS2/build/MACS2/filterdup_cmd.py -> /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2 byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/randsample_cmd.py to randsample_cmd.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/pileup_cmd.py to pileup_cmd.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/bdgbroadcall_cmd.py to bdgbroadcall_cmd.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/OutputWriter.py to OutputWriter.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/OptValidator.py to OptValidator.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/__init__.py to __init__.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/bdgcmp_cmd.py to bdgcmp_cmd.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/diffpeak_cmd.py to diffpeak_cmd.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/bdgpeakcall_cmd.py to bdgpeakcall_cmd.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/callpeak_cmd.py to callpeak_cmd.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/cmbreps_cmd.py to cmbreps_cmd.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/refinepeak_cmd.py to refinepeak_cmd.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/bdgdiff_cmd.py to bdgdiff_cmd.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/predictd_cmd.py to predictd_cmd.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/bdgopt_cmd.py to bdgopt_cmd.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/IO/__init__.py to __init__.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/Constants.py to Constants.cpython-38.pyc byte-compiling /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2/filterdup_cmd.py to filterdup_cmd.cpython-38.pyc running install_egg_info running egg_info creating MACS2.egg-info writing MACS2.egg-info/PKG-INFO writing dependency_links to MACS2.egg-info/dependency_links.txt writing requirements to MACS2.egg-info/requires.txt writing top-level names to MACS2.egg-info/top_level.txt writing manifest file 'MACS2.egg-info/SOURCES.txt' reading manifest file 'MACS2.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files found matching '.gitignore' warning: no previously-included files found matching '.travis.yml' no previously-included directories found matching '.github' no previously-included directories found matching 'DOCKER' writing manifest file 'MACS2.egg-info/SOURCES.txt' Copying MACS2.egg-info to /<>/debian/macs/usr/lib/python3.8/dist-packages/MACS2-2.2.7.1.egg-info Skipping SOURCES.txt running install_scripts creating /<>/debian/macs/usr/bin copying build/scripts-3.8/macs2 -> /<>/debian/macs/usr/bin changing mode of /<>/debian/macs/usr/bin/macs2 to 755 dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installexamples -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: package macs: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package macs: substitution variable ${python3:Versions} unused, but is defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild INFO: pkgstriptranslations version 146 INFO: pkgstriptranslations version 146 pkgstriptranslations: processing macs (in debian/macs); do_strip: , oemstrip: pkgstriptranslations: processing macs-dbgsym (in debian/.debhelper/macs/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/macs/DEBIAN/control, package macs, directory debian/macs pkgstripfiles: processing control file: debian/.debhelper/macs/dbgsym-root/DEBIAN/control, package macs-dbgsym, directory debian/.debhelper/macs/dbgsym-root dpkg-deb: building package 'macs-dbgsym' in 'debian/.debhelper/scratch-space/build-macs/macs-dbgsym_2.2.7.1-3_amd64.deb'. pkgstripfiles: Truncating usr/share/doc/macs/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package macs ... pkgstripfiles: No PNG files. dpkg-deb: building package 'macs' in '../macs_2.2.7.1-3_amd64.deb'. Renaming macs-dbgsym_2.2.7.1-3_amd64.deb to macs-dbgsym_2.2.7.1-3_amd64.ddeb dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../macs_2.2.7.1-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from macs-2.2.7.1/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20200716-0523 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ macs_2.2.7.1-3_amd64.changes: ----------------------------- Format: 1.8 Date: Wed, 15 Jul 2020 23:27:39 +0200 Source: macs Binary: macs Architecture: amd64 Version: 2.2.7.1-3 Distribution: groovy-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: macs - Model-based Analysis of ChIP-Seq on short reads sequencers Closes: 965073 Changes: macs (2.2.7.1-3) unstable; urgency=medium . * Link properly with libm Closes: #965073 * debhelper-compat 13 (routine-update) Checksums-Sha1: c8db38976c799833ea9f86fa459110758361ea4f 7839940 macs-dbgsym_2.2.7.1-3_amd64.ddeb 33146bdab0edc94e1b7ab9752c413d17c22dfb27 6936 macs_2.2.7.1-3_amd64.buildinfo 2d332db96a0a6945f1d57cb6271e42602341570e 2681464 macs_2.2.7.1-3_amd64.deb Checksums-Sha256: aa57fca9a4929c5be017a591212f6b6aae354e37597e4260a28a361b7c07e030 7839940 macs-dbgsym_2.2.7.1-3_amd64.ddeb a8f5269de7fec9525b3e5ea60ce5938e0a79762b00fa2a1eaea9e4a665037f52 6936 macs_2.2.7.1-3_amd64.buildinfo 54a3c2cb3418c64c80245209cc47fa9e48130ba4ac4a5d48f753d2e30f57b8ad 2681464 macs_2.2.7.1-3_amd64.deb Files: 318650853c1ac9a2a600e9438b6c8bd9 7839940 debug optional macs-dbgsym_2.2.7.1-3_amd64.ddeb cf0e23734b427c4ce14a3959bd04d169 6936 science optional macs_2.2.7.1-3_amd64.buildinfo dbc8bef59635e25b762029bbe7c5c3d1 2681464 science optional macs_2.2.7.1-3_amd64.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ macs_2.2.7.1-3_amd64.deb ------------------------ new debian package, version 2.0. size 2681464 bytes: control archive=2932 bytes. 1034 bytes, 19 lines control 5137 bytes, 59 lines md5sums 233 bytes, 12 lines * postinst #!/bin/sh 382 bytes, 12 lines * prerm #!/bin/sh Package: macs Version: 2.2.7.1-3 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 5994 Depends: python3 (<< 3.9), python3 (>= 3.8~), python3-numpy, python3:any, libc6 (>= 2.29) Section: science Priority: optional Homepage: https://github.com/taoliu/MACS/ Description: Model-based Analysis of ChIP-Seq on short reads sequencers MACS empirically models the length of the sequenced ChIP fragments, which tends to be shorter than sonication or library construction size estimates, and uses it to improve the spatial resolution of predicted binding sites. MACS also uses a dynamic Poisson distribution to effectively capture local biases in the genome sequence, allowing for more sensitive and robust prediction. MACS compares favorably to existing ChIP-Seq peak-finding algorithms, is publicly available open source, and can be used for ChIP-Seq with or without control samples. drwxr-xr-x root/root 0 2020-07-15 21:27 ./ drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/ drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/bin/ -rwxr-xr-x root/root 67796 2020-07-15 21:27 ./usr/bin/macs2 drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/ drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/python3/ drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/ -rw-r--r-- root/root 30146 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/PKG-INFO -rw-r--r-- root/root 1 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/dependency_links.txt -rw-r--r-- root/root 0 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/requires.txt -rw-r--r-- root/root 6 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2-2.2.7.1.egg-info/top_level.txt drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/ -rw-r--r-- root/root 845 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/Constants.py drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/ -rw-r--r-- root/root 459760 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/BedGraph.cpython-38-x86_64-linux-gnu.so -rw-r--r-- root/root 96784 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/BedGraphIO.cpython-38-x86_64-linux-gnu.so -rw-r--r-- root/root 504016 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/CallPeakUnit.cpython-38-x86_64-linux-gnu.so -rw-r--r-- root/root 416672 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/FixWidthTrack.cpython-38-x86_64-linux-gnu.so -rw-r--r-- root/root 287792 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/PairedEndTrack.cpython-38-x86_64-linux-gnu.so -rw-r--r-- root/root 537840 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/Parser.cpython-38-x86_64-linux-gnu.so -rw-r--r-- root/root 596752 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/PeakIO.cpython-38-x86_64-linux-gnu.so -rw-r--r-- root/root 702784 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/IO/ScoreTrack.cpython-38-x86_64-linux-gnu.so -rw-r--r-- root/root 0 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/IO/__init__.py -rw-r--r-- root/root 28454 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/OptValidator.py -rw-r--r-- root/root 10842 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/OutputWriter.py -rw-r--r-- root/root 150056 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/PeakDetect.cpython-38-x86_64-linux-gnu.so -rw-r--r-- root/root 270832 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/PeakModel.cpython-38-x86_64-linux-gnu.so -rw-r--r-- root/root 251616 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/Pileup.cpython-38-x86_64-linux-gnu.so -rw-r--r-- root/root 130736 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/Prob.cpython-38-x86_64-linux-gnu.so -rw-r--r-- root/root 174160 2020-07-15 21:27 ./usr/lib/python3/dist-packages/MACS2/Signal.cpython-38-x86_64-linux-gnu.so -rw-r--r-- root/root 24 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/__init__.py -rw-r--r-- root/root 2141 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgbroadcall_cmd.py -rw-r--r-- root/root 3712 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgcmp_cmd.py -rw-r--r-- root/root 4318 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgdiff_cmd.py -rw-r--r-- root/root 2388 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgopt_cmd.py -rw-r--r-- root/root 2696 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/bdgpeakcall_cmd.py -rw-r--r-- root/root 1157 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/cPosValCalculation.pxd -rw-r--r-- root/root 19674 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/callpeak_cmd.py -rw-r--r-- root/root 1944 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/cmbreps_cmd.py -rw-r--r-- root/root 9715 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/diffpeak_cmd.py -rw-r--r-- root/root 4583 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/filterdup_cmd.py -rw-r--r-- root/root 3199 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/khash.pxd -rw-r--r-- root/root 3964 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/pileup_cmd.py -rw-r--r-- root/root 3178 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/predictd_cmd.py -rw-r--r-- root/root 3888 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/randsample_cmd.py -rw-r--r-- root/root 6845 2020-04-12 00:00 ./usr/lib/python3/dist-packages/MACS2/refinepeak_cmd.py drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/ drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/doc/macs/ -rw-r--r-- root/root 9676 2020-04-12 00:00 ./usr/share/doc/macs/README.md.gz -rw-r--r-- root/root 671 2020-07-15 21:27 ./usr/share/doc/macs/README.test -rw-r--r-- root/root 1052 2020-07-15 21:27 ./usr/share/doc/macs/changelog.Debian.gz -rw-r--r-- root/root 3361 2020-07-15 21:27 ./usr/share/doc/macs/copyright drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/doc/macs/examples/ -rw-r--r-- root/root 129766 2020-07-15 21:27 ./usr/share/doc/macs/examples/aluY.chr1.bed.gz -rw-r--r-- root/root 1128077 2020-07-15 21:27 ./usr/share/doc/macs/examples/gerp.chr1.bed.gz -rw-r--r-- root/root 427 2020-07-15 21:27 ./usr/share/doc/macs/run-unit-test drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/lintian/ drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 107 2020-07-15 21:27 ./usr/share/lintian/overrides/macs drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/man/ drwxr-xr-x root/root 0 2020-07-15 21:27 ./usr/share/man/man1/ -rw-r--r-- root/root 1124 2020-07-15 21:27 ./usr/share/man/man1/macs2.1.gz -rw-r--r-- root/root 934 2020-07-15 21:27 ./usr/share/man/man1/macs2_bdgbroadcall.1.gz -rw-r--r-- root/root 1399 2020-07-15 21:27 ./usr/share/man/man1/macs2_bdgcmp.1.gz -rw-r--r-- root/root 1198 2020-07-15 21:27 ./usr/share/man/man1/macs2_bdgdiff.1.gz -rw-r--r-- root/root 913 2020-07-15 21:27 ./usr/share/man/man1/macs2_bdgopt.1.gz -rw-r--r-- root/root 923 2020-07-15 21:27 ./usr/share/man/man1/macs2_bdgpeakcall.1.gz -rw-r--r-- root/root 5697 2020-07-15 21:27 ./usr/share/man/man1/macs2_callpeak.1.gz -rw-r--r-- root/root 783 2020-07-15 21:27 ./usr/share/man/man1/macs2_cmbreps.1.gz -rw-r--r-- root/root 1950 2020-07-15 21:27 ./usr/share/man/man1/macs2_filterdup.1.gz -rw-r--r-- root/root 1762 2020-07-15 21:27 ./usr/share/man/man1/macs2_pileup.1.gz -rw-r--r-- root/root 1672 2020-07-15 21:27 ./usr/share/man/man1/macs2_predictd.1.gz -rw-r--r-- root/root 1552 2020-07-15 21:27 ./usr/share/man/man1/macs2_randsample.1.gz -rw-r--r-- root/root 1340 2020-07-15 21:27 ./usr/share/man/man1/macs2_refinepeak.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 1557704 Build-Time: 487 Distribution: groovy-proposed Host Architecture: amd64 Install-Time: 63 Job: macs_2.2.7.1-3.dsc Machine Architecture: amd64 Package: macs Package-Time: 562 Source-Version: 2.2.7.1-3 Space: 1557704 Status: successful Version: 2.2.7.1-3 -------------------------------------------------------------------------------- Finished at 20200716-0523 Build needed 00:09:22, 1557704k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=groovy --arch=amd64 PACKAGEBUILD-19595984 Scanning for processes to kill in build PACKAGEBUILD-19595984