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libseqlib package

libseqlib 1.2.0+dfsg-11build2 source package in Ubuntu

Changelog

libseqlib (1.2.0+dfsg-11build2) noble; urgency=medium

  * No-change rebuild for CVE-2024-3094

 -- Steve Langasek <email address hidden>  Sun, 31 Mar 2024 19:36:26 +0000

Upload details

Uploaded by:
Steve Langasek
Uploaded to:
Noble
Original maintainer:
Ubuntu Developers
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Oracular release universe misc
Noble release universe misc

Downloads

File Size SHA-256 Checksum
libseqlib_1.2.0+dfsg.orig.tar.xz 145.5 KiB 408ee92e5041ff45d9d259d1507ef783e74c565d02e0c623ef0a67a7c387b953
libseqlib_1.2.0+dfsg-11build2.debian.tar.xz 15.3 KiB a1100752ca654f8d1d1c615d4991d1da6243697959f08c0aa31c38cf80dd185d
libseqlib_1.2.0+dfsg-11build2.dsc 2.3 KiB 789c06b88310451275cbf82bdc7564c8c98df85fc9d7d0406f8f63acfa41106b

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Binary packages built by this source

libseqlib-dev: C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev)

 C++ API and command line tool that provides a rapid and user-friendly
 interface to BAM/SAM/CRAM files, global sequence alignment operations
 and sequence assembly. Four C libraries perform core operations in
 SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment
 and Fermi for error correction and sequence assembly. Benchmarking
 indicates that SeqLib has lower CPU and memory requirements than leading
 C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct
 and assemble reads from a CRAM file and then align with BWA-MEM.
 SeqLib also provides additional capabilities, including chromosome-aware
 interval queries and read plotting. Command line tools are available for
 performing integrated error correction, micro-assemblies and alignment.
 .
 This package contains the header files and static library.

libseqlib2: C++ htslib/bwa-mem/fermi interface for interrogating sequence data

 C++ API and command line tool that provides a rapid and user-friendly
 interface to BAM/SAM/CRAM files, global sequence alignment operations
 and sequence assembly. Four C libraries perform core operations in
 SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment
 and Fermi for error correction and sequence assembly. Benchmarking
 indicates that SeqLib has lower CPU and memory requirements than leading
 C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct
 and assemble reads from a CRAM file and then align with BWA-MEM.
 SeqLib also provides additional capabilities, including chromosome-aware
 interval queries and read plotting. Command line tools are available for
 performing integrated error correction, micro-assemblies and alignment.

libseqlib2-dbgsym: debug symbols for libseqlib2