RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: 2.6.35-22-omap #35-Ubuntu Sun Oct 17 00:23:55 UTC 2010 armv7l Buildd toolchain package versions: launchpad-buildd_110~0.IS.08.04 python-lpbuildd_110~0.IS.08.04 bzr_2.4.0-0ubuntu2~9.IS.10.04.3. Syncing the system clock with the buildd NTP service... 1 Mar 14:56:51 ntpdate[27881]: adjust time server 10.211.37.1 offset -0.004958 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', '57e50153f65ea799f1ee425ab4d34166fcc49295', '/home/buildd/filecache-default/d3698f3d25082223a5277f851661c1d981e58543'] Unpacking chroot for build 57e50153f65ea799f1ee425ab4d34166fcc49295 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', '57e50153f65ea799f1ee425ab4d34166fcc49295'] Mounting chroot for build 57e50153f65ea799f1ee425ab4d34166fcc49295 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', '57e50153f65ea799f1ee425ab4d34166fcc49295', 'deb http://ftpmaster.internal/ubuntu precise main universe'] Overriding sources.list in build-57e50153f65ea799f1ee425ab4d34166fcc49295 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', '57e50153f65ea799f1ee425ab4d34166fcc49295', 'armhf'] Updating debian chroot for build 57e50153f65ea799f1ee425ab4d34166fcc49295 Ign http://ftpmaster.internal precise InRelease Ign http://archive-team.internal precise InRelease Ign http://archive-team.internal precise Release.gpg Get:1 http://ftpmaster.internal precise Release.gpg [198 B] Get:2 http://archive-team.internal precise Release [743 B] Get:3 http://ftpmaster.internal precise Release [49.6 kB] Ign http://archive-team.internal precise/main TranslationIndex Get:4 http://archive-team.internal precise/main armhf Packages [1213 B] Ign http://archive-team.internal precise/main Translation-en Get:5 http://ftpmaster.internal precise/main armhf Packages [1268 kB] Get:6 http://ftpmaster.internal precise/universe armhf Packages [4616 kB] Get:7 http://ftpmaster.internal precise/main TranslationIndex [3570 B] Get:8 http://ftpmaster.internal precise/universe TranslationIndex [2784 B] Get:9 http://ftpmaster.internal precise/main Translation-en [722 kB] Get:10 http://ftpmaster.internal precise/universe Translation-en [3366 kB] Fetched 10.0 MB in 1min 24s (119 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libc-bin libc-dev-bin libc6 libc6-dev libdbus-1-3 libgcc1 libglib2.0-0 libgomp1 libgssapi-krb5-2 libk5crypto3 libkrb5-3 libkrb5support0 libldap-2.4-2 libstdc++6 libstdc++6-4.6-dev linux-libc-dev lsb-base multiarch-support 22 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 25.3 MB of archives. After this operation, 21.5 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libc6-dev libc-dev-bin linux-libc-dev libgomp1 gcc-4.6-base libgcc1 cpp-4.6 libstdc++6-4.6-dev g++-4.6 gcc-4.6 libstdc++6 libc-bin libc6 libdbus-1-3 libglib2.0-0 libk5crypto3 libgssapi-krb5-2 libkrb5-3 libkrb5support0 libldap-2.4-2 lsb-base multiarch-support Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ precise/main libc6-dev armhf 2.15-0ubuntu3 [2123 kB] Get:2 http://ftpmaster.internal/ubuntu/ precise/main libc-dev-bin armhf 2.15-0ubuntu3 [73.2 kB] Get:3 http://ftpmaster.internal/ubuntu/ precise/main linux-libc-dev armhf 3.2.0-17.27 [819 kB] Get:4 http://ftpmaster.internal/ubuntu/ precise/main libgomp1 armhf 4.6.2-16ubuntu1 [23.6 kB] Get:5 http://ftpmaster.internal/ubuntu/ precise/main gcc-4.6-base armhf 4.6.2-16ubuntu1 [15.5 kB] Get:6 http://ftpmaster.internal/ubuntu/ precise/main libgcc1 armhf 1:4.6.2-16ubuntu1 [22.0 kB] Get:7 http://ftpmaster.internal/ubuntu/ precise/main cpp-4.6 armhf 4.6.2-16ubuntu1 [4101 kB] Get:8 http://ftpmaster.internal/ubuntu/ precise/main libstdc++6-4.6-dev armhf 4.6.2-16ubuntu1 [1703 kB] Get:9 http://ftpmaster.internal/ubuntu/ precise/main g++-4.6 armhf 4.6.2-16ubuntu1 [4978 kB] Get:10 http://ftpmaster.internal/ubuntu/ precise/main gcc-4.6 armhf 4.6.2-16ubuntu1 [4562 kB] Get:11 http://ftpmaster.internal/ubuntu/ precise/main libstdc++6 armhf 4.6.2-16ubuntu1 [268 kB] Get:12 http://ftpmaster.internal/ubuntu/ precise/main libc-bin armhf 2.15-0ubuntu3 [1014 kB] Get:13 http://ftpmaster.internal/ubuntu/ precise/main libc6 armhf 2.15-0ubuntu3 [3825 kB] Get:14 http://ftpmaster.internal/ubuntu/ precise/main libdbus-1-3 armhf 1.4.18-1ubuntu1 [116 kB] Get:15 http://ftpmaster.internal/ubuntu/ precise/main libglib2.0-0 armhf 2.31.18-0ubuntu2 [1019 kB] Get:16 http://ftpmaster.internal/ubuntu/ precise/main libk5crypto3 armhf 1.10+dfsg~beta1-2 [79.4 kB] Get:17 http://ftpmaster.internal/ubuntu/ precise/main libgssapi-krb5-2 armhf 1.10+dfsg~beta1-2 [93.1 kB] Get:18 http://ftpmaster.internal/ubuntu/ precise/main libkrb5-3 armhf 1.10+dfsg~beta1-2 [292 kB] Get:19 http://ftpmaster.internal/ubuntu/ precise/main libkrb5support0 armhf 1.10+dfsg~beta1-2 [19.6 kB] Get:20 http://ftpmaster.internal/ubuntu/ precise/main libldap-2.4-2 armhf 2.4.28-1.1ubuntu3 [152 kB] Get:21 http://ftpmaster.internal/ubuntu/ precise/main lsb-base all 4.0-0ubuntu20 [10.2 kB] Get:22 http://ftpmaster.internal/ubuntu/ precise/main multiarch-support armhf 2.15-0ubuntu3 [4480 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 25.3 MB in 21s (1156 kB/s) (Reading database ... 12090 files and directories currently installed.) Preparing to replace libc6-dev 2.15-0ubuntu2 (using .../libc6-dev_2.15-0ubuntu3_armhf.deb) ... Unpacking replacement libc6-dev ... Preparing to replace libc-dev-bin 2.15-0ubuntu2 (using .../libc-dev-bin_2.15-0ubuntu3_armhf.deb) ... Unpacking replacement libc-dev-bin ... Preparing to replace linux-libc-dev 3.2.0-17.26 (using .../linux-libc-dev_3.2.0-17.27_armhf.deb) ... Unpacking replacement linux-libc-dev ... Preparing to replace libgomp1 4.6.2-14ubuntu2 (using .../libgomp1_4.6.2-16ubuntu1_armhf.deb) ... Unpacking replacement libgomp1 ... Preparing to replace gcc-4.6-base 4.6.2-14ubuntu2 (using .../gcc-4.6-base_4.6.2-16ubuntu1_armhf.deb) ... Unpacking replacement gcc-4.6-base ... Setting up gcc-4.6-base (4.6.2-16ubuntu1) ... (Reading database ... 12090 files and directories currently installed.) Preparing to replace libgcc1 1:4.6.2-14ubuntu2 (using .../libgcc1_1%3a4.6.2-16ubuntu1_armhf.deb) ... Unpacking replacement libgcc1 ... Setting up libgcc1 (1:4.6.2-16ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12090 files and directories currently installed.) Preparing to replace cpp-4.6 4.6.2-14ubuntu2 (using .../cpp-4.6_4.6.2-16ubuntu1_armhf.deb) ... Unpacking replacement cpp-4.6 ... Preparing to replace libstdc++6-4.6-dev 4.6.2-14ubuntu2 (using .../libstdc++6-4.6-dev_4.6.2-16ubuntu1_armhf.deb) ... Unpacking replacement libstdc++6-4.6-dev ... Preparing to replace g++-4.6 4.6.2-14ubuntu2 (using .../g++-4.6_4.6.2-16ubuntu1_armhf.deb) ... Unpacking replacement g++-4.6 ... Preparing to replace gcc-4.6 4.6.2-14ubuntu2 (using .../gcc-4.6_4.6.2-16ubuntu1_armhf.deb) ... Unpacking replacement gcc-4.6 ... Preparing to replace libstdc++6 4.6.2-14ubuntu2 (using .../libstdc++6_4.6.2-16ubuntu1_armhf.deb) ... Unpacking replacement libstdc++6 ... Setting up libstdc++6 (4.6.2-16ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12090 files and directories currently installed.) Preparing to replace libc-bin 2.15-0ubuntu2 (using .../libc-bin_2.15-0ubuntu3_armhf.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.15-0ubuntu3) ... (Reading database ... 12090 files and directories currently installed.) Preparing to replace libc6 2.15-0ubuntu2 (using .../libc6_2.15-0ubuntu3_armhf.deb) ... Unpacking replacement libc6 ... Setting up libc6 (2.15-0ubuntu3) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place (Reading database ... 12090 files and directories currently installed.) Preparing to replace libdbus-1-3 1.4.16-1ubuntu4 (using .../libdbus-1-3_1.4.18-1ubuntu1_armhf.deb) ... Unpacking replacement libdbus-1-3 ... Preparing to replace libglib2.0-0 2.31.16-0ubuntu2 (using .../libglib2.0-0_2.31.18-0ubuntu2_armhf.deb) ... Unpacking replacement libglib2.0-0 ... Preparing to replace libk5crypto3 1.10+dfsg~alpha2-1 (using .../libk5crypto3_1.10+dfsg~beta1-2_armhf.deb) ... Unpacking replacement libk5crypto3 ... Preparing to replace libgssapi-krb5-2 1.10+dfsg~alpha2-1 (using .../libgssapi-krb5-2_1.10+dfsg~beta1-2_armhf.deb) ... Unpacking replacement libgssapi-krb5-2 ... Preparing to replace libkrb5-3 1.10+dfsg~alpha2-1 (using .../libkrb5-3_1.10+dfsg~beta1-2_armhf.deb) ... Unpacking replacement libkrb5-3 ... Preparing to replace libkrb5support0 1.10+dfsg~alpha2-1 (using .../libkrb5support0_1.10+dfsg~beta1-2_armhf.deb) ... Unpacking replacement libkrb5support0 ... Preparing to replace libldap-2.4-2 2.4.28-1.1ubuntu2 (using .../libldap-2.4-2_2.4.28-1.1ubuntu3_armhf.deb) ... Unpacking replacement libldap-2.4-2 ... Preparing to replace lsb-base 4.0-0ubuntu19 (using .../lsb-base_4.0-0ubuntu20_all.deb) ... Unpacking replacement lsb-base ... Setting up lsb-base (4.0-0ubuntu20) ... (Reading database ... 12090 files and directories currently installed.) Preparing to replace multiarch-support 2.15-0ubuntu2 (using .../multiarch-support_2.15-0ubuntu3_armhf.deb) ... Unpacking replacement multiarch-support ... Setting up multiarch-support (2.15-0ubuntu3) ... Setting up libc-dev-bin (2.15-0ubuntu3) ... Setting up linux-libc-dev (3.2.0-17.27) ... Setting up libc6-dev (2.15-0ubuntu3) ... Setting up libgomp1 (4.6.2-16ubuntu1) ... Setting up cpp-4.6 (4.6.2-16ubuntu1) ... Setting up gcc-4.6 (4.6.2-16ubuntu1) ... Setting up libdbus-1-3 (1.4.18-1ubuntu1) ... Setting up libglib2.0-0 (2.31.18-0ubuntu2) ... No schema files found: doing nothing. Setting up libkrb5support0 (1.10+dfsg~beta1-2) ... Setting up libk5crypto3 (1.10+dfsg~beta1-2) ... Setting up libkrb5-3 (1.10+dfsg~beta1-2) ... Setting up libgssapi-krb5-2 (1.10+dfsg~beta1-2) ... Setting up libldap-2.4-2 (2.4.28-1.1ubuntu3) ... Setting up libstdc++6-4.6-dev (4.6.2-16ubuntu1) ... Setting up g++-4.6 (4.6.2-16ubuntu1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', '57e50153f65ea799f1ee425ab4d34166fcc49295', 'armhf', 'precise', '--nolog', '--batch', '--archive=ubuntu', '--dist=precise', '--purpose=PRIMARY', '--architecture=armhf', '--comp=universe', 'libbpp-seq_2.0.3-1.dsc'] Initiating build 57e50153f65ea799f1ee425ab4d34166fcc49295 with 0 processor cores. Automatic build of libbpp-seq_2.0.3-1 on adoxaceae by sbuild/armhf 1.170.5 Build started at 20120301-1503 ****************************************************************************** libbpp-seq_2.0.3-1.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 5), cmake (>= 2.6), libbpp-core-dev (>= 2.0.3) Checking for already installed source dependencies... debhelper: missing cmake: missing libbpp-core-dev: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper cmake libbpp-core-dev Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: bsdmainutils cmake-data emacsen-common file gettext gettext-base groff-base html2text intltool-debian libarchive1 libbpp-core2 libcroco3 libcurl3 libexpat1 libgettextpo0 libmagic1 libpipeline1 libunistring0 libxml2 libxmlrpc-core-c3 man-db po-debconf Suggested packages: wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser libmail-box-perl Recommended packages: curl wget lynx-cur xml-core libmail-sendmail-perl The following NEW packages will be installed: bsdmainutils cmake cmake-data debhelper emacsen-common file gettext gettext-base groff-base html2text intltool-debian libarchive1 libbpp-core-dev libbpp-core2 libcroco3 libcurl3 libexpat1 libgettextpo0 libmagic1 libpipeline1 libunistring0 libxml2 libxmlrpc-core-c3 man-db po-debconf 0 upgraded, 25 newly installed, 0 to remove and 0 not upgraded. Need to get 12.1 MB of archives. After this operation, 33.6 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libexpat1 libpipeline1 libxml2 libarchive1 libcroco3 libcurl3 libunistring0 libgettextpo0 libmagic1 file bsdmainutils gettext-base groff-base man-db libxmlrpc-core-c3 emacsen-common cmake-data cmake html2text gettext intltool-debian po-debconf debhelper libbpp-core2 libbpp-core-dev Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ precise/main libexpat1 armhf 2.0.1-7.2 [102 kB] Get:2 http://ftpmaster.internal/ubuntu/ precise/main libpipeline1 armhf 1.2.0-5 [20.7 kB] Get:3 http://ftpmaster.internal/ubuntu/ precise/main libxml2 armhf 2.7.8.dfsg-5.1ubuntu4 [549 kB] Get:4 http://ftpmaster.internal/ubuntu/ precise/main libarchive1 armhf 2.8.5-5 [100 kB] Get:5 http://ftpmaster.internal/ubuntu/ precise/main libcroco3 armhf 0.6.4-2 [82.0 kB] Get:6 http://ftpmaster.internal/ubuntu/ precise/main libcurl3 armhf 7.22.0-3ubuntu2 [209 kB] Get:7 http://ftpmaster.internal/ubuntu/ precise/main libunistring0 armhf 0.9.3-5 [393 kB] Get:8 http://ftpmaster.internal/ubuntu/ precise/main libgettextpo0 armhf 0.18.1.1-5ubuntu3 [99.4 kB] Get:9 http://ftpmaster.internal/ubuntu/ precise/main libmagic1 armhf 5.09-2 [213 kB] Get:10 http://ftpmaster.internal/ubuntu/ precise/main file armhf 5.09-2 [19.0 kB] Get:11 http://ftpmaster.internal/ubuntu/ precise/main bsdmainutils armhf 8.2.3 [193 kB] Get:12 http://ftpmaster.internal/ubuntu/ precise/main gettext-base armhf 0.18.1.1-5ubuntu3 [54.7 kB] Get:13 http://ftpmaster.internal/ubuntu/ precise/main groff-base armhf 1.21-6 [926 kB] Get:14 http://ftpmaster.internal/ubuntu/ precise/main man-db armhf 2.6.1-1 [699 kB] Get:15 http://ftpmaster.internal/ubuntu/ precise/main libxmlrpc-core-c3 armhf 1.16.33-3.1ubuntu5 [136 kB] Get:16 http://ftpmaster.internal/ubuntu/ precise/main emacsen-common all 1.4.22ubuntu1 [16.9 kB] Get:17 http://ftpmaster.internal/ubuntu/ precise/main cmake-data all 2.8.7-0ubuntu3 [751 kB] Get:18 http://ftpmaster.internal/ubuntu/ precise/main cmake armhf 2.8.7-0ubuntu3 [3655 kB] Get:19 http://ftpmaster.internal/ubuntu/ precise/main html2text armhf 1.3.2a-15 [85.8 kB] Get:20 http://ftpmaster.internal/ubuntu/ precise/main gettext armhf 0.18.1.1-5ubuntu3 [1050 kB] Get:21 http://ftpmaster.internal/ubuntu/ precise/main intltool-debian all 0.35.0+20060710.1 [31.6 kB] Get:22 http://ftpmaster.internal/ubuntu/ precise/main po-debconf all 1.0.16+nmu2ubuntu1 [210 kB] Get:23 http://ftpmaster.internal/ubuntu/ precise/main debhelper all 9.20120115ubuntu2 [618 kB] Get:24 http://ftpmaster.internal/ubuntu/ precise/universe libbpp-core2 armhf 2.0.3-1 [498 kB] Get:25 http://ftpmaster.internal/ubuntu/ precise/universe libbpp-core-dev armhf 2.0.3-1 [1404 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 12.1 MB in 5s (2103 kB/s) Selecting previously unselected package libexpat1. (Reading database ... 12090 files and directories currently installed.) Unpacking libexpat1 (from .../libexpat1_2.0.1-7.2_armhf.deb) ... Selecting previously unselected package libpipeline1. Unpacking libpipeline1 (from .../libpipeline1_1.2.0-5_armhf.deb) ... Selecting previously unselected package libxml2. Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-5.1ubuntu4_armhf.deb) ... Selecting previously unselected package libarchive1. Unpacking libarchive1 (from .../libarchive1_2.8.5-5_armhf.deb) ... Selecting previously unselected package libcroco3. Unpacking libcroco3 (from .../libcroco3_0.6.4-2_armhf.deb) ... Selecting previously unselected package libcurl3. Unpacking libcurl3 (from .../libcurl3_7.22.0-3ubuntu2_armhf.deb) ... Selecting previously unselected package libunistring0. Unpacking libunistring0 (from .../libunistring0_0.9.3-5_armhf.deb) ... Selecting previously unselected package libgettextpo0. Unpacking libgettextpo0 (from .../libgettextpo0_0.18.1.1-5ubuntu3_armhf.deb) ... Selecting previously unselected package libmagic1. Unpacking libmagic1 (from .../libmagic1_5.09-2_armhf.deb) ... Selecting previously unselected package file. Unpacking file (from .../archives/file_5.09-2_armhf.deb) ... Selecting previously unselected package bsdmainutils. Unpacking bsdmainutils (from .../bsdmainutils_8.2.3_armhf.deb) ... Selecting previously unselected package gettext-base. Unpacking gettext-base (from .../gettext-base_0.18.1.1-5ubuntu3_armhf.deb) ... Selecting previously unselected package groff-base. Unpacking groff-base (from .../groff-base_1.21-6_armhf.deb) ... Selecting previously unselected package man-db. Unpacking man-db (from .../man-db_2.6.1-1_armhf.deb) ... Selecting previously unselected package libxmlrpc-core-c3. Unpacking libxmlrpc-core-c3 (from .../libxmlrpc-core-c3_1.16.33-3.1ubuntu5_armhf.deb) ... Selecting previously unselected package emacsen-common. Unpacking emacsen-common (from .../emacsen-common_1.4.22ubuntu1_all.deb) ... Selecting previously unselected package cmake-data. Unpacking cmake-data (from .../cmake-data_2.8.7-0ubuntu3_all.deb) ... Selecting previously unselected package cmake. Unpacking cmake (from .../cmake_2.8.7-0ubuntu3_armhf.deb) ... Selecting previously unselected package html2text. Unpacking html2text (from .../html2text_1.3.2a-15_armhf.deb) ... Selecting previously unselected package gettext. Unpacking gettext (from .../gettext_0.18.1.1-5ubuntu3_armhf.deb) ... Selecting previously unselected package intltool-debian. Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ... Selecting previously unselected package po-debconf. Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2ubuntu1_all.deb) ... Selecting previously unselected package debhelper. Unpacking debhelper (from .../debhelper_9.20120115ubuntu2_all.deb) ... Selecting previously unselected package libbpp-core2. Unpacking libbpp-core2 (from .../libbpp-core2_2.0.3-1_armhf.deb) ... Selecting previously unselected package libbpp-core-dev. Unpacking libbpp-core-dev (from .../libbpp-core-dev_2.0.3-1_armhf.deb) ... Setting up libexpat1 (2.0.1-7.2) ... Setting up libpipeline1 (1.2.0-5) ... Setting up libxml2 (2.7.8.dfsg-5.1ubuntu4) ... Setting up libarchive1 (2.8.5-5) ... Setting up libcroco3 (0.6.4-2) ... Setting up libcurl3 (7.22.0-3ubuntu2) ... Setting up libunistring0 (0.9.3-5) ... Setting up libgettextpo0 (0.18.1.1-5ubuntu3) ... Setting up libmagic1 (5.09-2) ... Setting up file (5.09-2) ... Setting up bsdmainutils (8.2.3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode. update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode. Setting up gettext-base (0.18.1.1-5ubuntu3) ... Setting up groff-base (1.21-6) ... Setting up man-db (2.6.1-1) ... Building database of manual pages ... Setting up libxmlrpc-core-c3 (1.16.33-3.1ubuntu5) ... Setting up emacsen-common (1.4.22ubuntu1) ... emacsen-common: Handling install of emacsen flavor emacs Setting up cmake-data (2.8.7-0ubuntu3) ... emacsen-common: Handling install of emacsen flavor emacs Setting up cmake (2.8.7-0ubuntu3) ... Setting up html2text (1.3.2a-15) ... Setting up gettext (0.18.1.1-5ubuntu3) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up debhelper (9.20120115ubuntu2) ... Setting up libbpp-core2 (2.0.3-1) ... Setting up libbpp-core-dev (2.0.3-1) ... Processing triggers for libc-bin ... ldconfig deferred processing now taking place Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.15-0ubuntu3 make_3.81-8.1ubuntu1 dpkg-dev_1.16.1.2ubuntu5 gcc-4.6_4.6.2-16ubuntu1 g++-4.6_4.6.2-16ubuntu1 binutils_2.22-5ubuntu1 libstdc++6-4.6-dev_4.6.2-16ubuntu1 libstdc++6_4.6.2-16ubuntu1 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::quilt gpgv: Signature made Thu Feb 16 17:56:19 2012 UTC using DSA key ID 497A176D gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./libbpp-seq_2.0.3-1.dsc dpkg-source: info: extracting libbpp-seq in libbpp-seq-2.0.3 dpkg-source: info: unpacking libbpp-seq_2.0.3.orig.tar.gz dpkg-source: info: unpacking libbpp-seq_2.0.3-1.debian.tar.gz dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor): -D_FORTIFY_SOURCE=2 dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Wformat-security dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2 dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor): -Wl,-Bsymbolic-functions -Wl,-z,relro dpkg-buildpackage: source package libbpp-seq dpkg-buildpackage: source version 2.0.3-1 dpkg-source --before-build libbpp-seq-2.0.3 dpkg-buildpackage: host architecture armhf /usr/bin/fakeroot debian/rules clean dh_testdir dh_testroot # Add here commands to clean up after the build process. [ ! -f Makefile ] || /usr/bin/make clean; [ ! -f Makefile ] || rm Makefile; [ ! -f Makefile ] || rm src/Makefile; rm -f config.sub config.guess rm -f build-stamp rm -f CMakeCache.txt rm -f *.cmake rm -f src/*.cmake rm -f test/*.cmake rm -rf CMakeFiles rm -rf src/CMakeFiles rm -rf test/CMakeFiles rm -rf _CPack_Packages rm -rf Testing rm -f DartConfiguration.tcl dh_clean debian/rules build cmake -DCMAKE_INSTALL_PREFIX=/usr -DBUILD_TESTING=OFF . -- The CXX compiler identification is GNU -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Library bpp-core found here: includes : /usr/include libraries: /usr/lib/libbpp-core.so -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Configuring done -- Generating done -- Build files have been written to: /build/buildd/libbpp-seq-2.0.3 dh_testdir dh_testdir # Add here commands to compile the package. /usr/bin/make make[1]: Entering directory `/build/buildd/libbpp-seq-2.0.3' make[2]: Entering directory `/build/buildd/libbpp-seq-2.0.3' make[3]: Entering directory `/build/buildd/libbpp-seq-2.0.3' Scanning dependencies of target bppseq-shared make[3]: Leaving directory `/build/buildd/libbpp-seq-2.0.3' make[3]: Entering directory `/build/buildd/libbpp-seq-2.0.3' [ 0%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/DNAToRNA.cpp.o [ 1%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/NucleicAcidsReplication.cpp.o [ 1%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Sequence.cpp.o [ 2%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/SequenceWithAnnotation.cpp.o [ 3%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/SequenceWithAnnotationTools.cpp.o [ 3%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/SequenceWithQuality.cpp.o [ 4%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/SequenceExceptions.cpp.o [ 5%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/SequencePositionIterators.cpp.o [ 5%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/SequenceTools.cpp.o [ 6%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/SequenceWithQualityTools.cpp.o [ 6%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/SequenceWalker.cpp.o [ 7%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Site.cpp.o [ 8%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/SiteExceptions.cpp.o [ 8%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/SiteTools.cpp.o [ 9%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/StringSequenceTools.cpp.o [ 10%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/SymbolList.cpp.o [ 10%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/SymbolListTools.cpp.o [ 11%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Transliterator.cpp.o [ 12%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/DistanceMatrix.cpp.o [ 12%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/CodonSiteTools.cpp.o [ 13%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/AbstractAlphabet.cpp.o [ 13%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/AlphabetExceptions.cpp.o [ 14%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/AlphabetTools.cpp.o [ 15%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/CodonAlphabet.cpp.o [ 15%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/DefaultAlphabet.cpp.o [ 16%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/CaseMaskedAlphabet.cpp.o [ 17%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/DNA.cpp.o [ 17%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/ProteicAlphabet.cpp.o [ 18%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/RNA.cpp.o [ 18%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/StandardCodonAlphabet.cpp.o [ 19%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/VertebrateMitochondrialCodonAlphabet.cpp.o [ 20%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/InvertebrateMitochondrialCodonAlphabet.cpp.o [ 20%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/EchinodermMitochondrialCodonAlphabet.cpp.o [ 21%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/YeastMitochondrialCodonAlphabet.cpp.o [ 22%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/WordAlphabet.cpp.o [ 22%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/RNY.cpp.o [ 23%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Alphabet/BinaryAlphabet.cpp.o [ 24%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/GeneticCode/GeneticCode.cpp.o [ 24%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/GeneticCode/StandardGeneticCode.cpp.o [ 25%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/GeneticCode/VertebrateMitochondrialGeneticCode.cpp.o [ 25%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/GeneticCode/InvertebrateMitochondrialGeneticCode.cpp.o [ 26%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/GeneticCode/EchinodermMitochondrialGeneticCode.cpp.o [ 27%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/GeneticCode/YeastMitochondrialGeneticCode.cpp.o [ 27%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/StateProperties/GranthamAAChemicalDistance.cpp.o [ 28%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/StateProperties/MiyataAAChemicalDistance.cpp.o [ 29%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/StateProperties/BLOSUM50.cpp.o [ 29%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/StateProperties/DefaultNucleotideScore.cpp.o [ 30%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/StateProperties/AAIndex1Entry.cpp.o [ 31%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/StateProperties/AAIndex2Entry.cpp.o [ 31%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/StateProperties/SimpleScore.cpp.o [ 32%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/AbstractSequenceContainer.cpp.o [ 32%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/AlignedSequenceContainer.cpp.o [ 33%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/MapSequenceContainer.cpp.o [ 34%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/SequenceContainerTools.cpp.o [ 34%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/SiteContainerExceptions.cpp.o [ 35%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/SiteContainerTools.cpp.o [ 36%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/VectorSequenceContainer.cpp.o [ 36%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/VectorSiteContainer.cpp.o [ 37%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/CompressedVectorSiteContainer.cpp.o [ 37%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Container/SiteIterator.cpp.o [ 38%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/Clustal.cpp.o [ 39%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/Dcse.cpp.o [ 39%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/Fasta.cpp.o [ 40%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/Fastq.cpp.o [ 41%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/Mase.cpp.o [ 41%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/MaseTools.cpp.o [ 42%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/Phylip.cpp.o [ 43%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/IoSequenceFactory.cpp.o [ 43%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/GenBank.cpp.o [ 44%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/PhredPhd.cpp.o [ 44%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/PhredPoly.cpp.o [ 45%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/NexusIoSequence.cpp.o [ 46%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/NexusTools.cpp.o [ 46%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/Stockholm.cpp.o [ 47%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/MafAlignmentParser.cpp.o [ 48%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Io/MafIterator.cpp.o [ 48%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Feature/SequenceFeature.cpp.o [ 49%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp.o [ 50%] Building CXX object src/CMakeFiles/bppseq-shared.dir/Bpp/Seq/App/SequenceApplicationTools.cpp.o Linking CXX shared library libbpp-seq.so make[3]: Leaving directory `/build/buildd/libbpp-seq-2.0.3' [ 50%] Built target bppseq-shared make[3]: Entering directory `/build/buildd/libbpp-seq-2.0.3' Scanning dependencies of target bppseq-static make[3]: Leaving directory `/build/buildd/libbpp-seq-2.0.3' make[3]: Entering directory `/build/buildd/libbpp-seq-2.0.3' [ 50%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/DNAToRNA.cpp.o [ 51%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/NucleicAcidsReplication.cpp.o [ 51%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Sequence.cpp.o [ 52%] 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src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/Clustal.cpp.o [ 89%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/Dcse.cpp.o [ 89%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/Fasta.cpp.o [ 90%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/Fastq.cpp.o [ 91%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/Mase.cpp.o [ 91%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/MaseTools.cpp.o [ 92%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/Phylip.cpp.o [ 93%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/IoSequenceFactory.cpp.o [ 93%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/GenBank.cpp.o [ 94%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/PhredPhd.cpp.o [ 94%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/PhredPoly.cpp.o [ 95%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/NexusIoSequence.cpp.o [ 96%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/NexusTools.cpp.o [ 96%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/Stockholm.cpp.o [ 97%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/MafAlignmentParser.cpp.o [ 98%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Io/MafIterator.cpp.o [ 98%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Feature/SequenceFeature.cpp.o [ 99%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/Feature/Gff/GffFeatureReader.cpp.o [100%] Building CXX object src/CMakeFiles/bppseq-static.dir/Bpp/Seq/App/SequenceApplicationTools.cpp.o Linking CXX static library libbpp-seq.a make[3]: Leaving directory `/build/buildd/libbpp-seq-2.0.3' [100%] Built target bppseq-static make[2]: Leaving directory `/build/buildd/libbpp-seq-2.0.3' make[1]: Leaving directory `/build/buildd/libbpp-seq-2.0.3' touch build-stamp /usr/bin/fakeroot debian/rules binary-arch cmake -DCMAKE_INSTALL_PREFIX=/usr -DBUILD_TESTING=OFF . -- Library bpp-core found here: includes : /usr/include libraries: /usr/lib/libbpp-core.so -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Configuring done -- Generating done -- Build files have been written to: /build/buildd/libbpp-seq-2.0.3 dh_testdir dh_testdir # Add here commands to compile the package. /usr/bin/make make[1]: Entering directory `/build/buildd/libbpp-seq-2.0.3' make[2]: Entering directory `/build/buildd/libbpp-seq-2.0.3' make[3]: Entering directory `/build/buildd/libbpp-seq-2.0.3' make[3]: Leaving directory `/build/buildd/libbpp-seq-2.0.3' [ 50%] Built target bppseq-shared make[3]: Entering directory `/build/buildd/libbpp-seq-2.0.3' make[3]: Leaving directory `/build/buildd/libbpp-seq-2.0.3' [100%] Built target bppseq-static make[2]: Leaving directory `/build/buildd/libbpp-seq-2.0.3' make[1]: Leaving directory `/build/buildd/libbpp-seq-2.0.3' touch build-stamp dh_testdir dh_testroot dh_prep dh_installdirs # Add here commands to install the package into debian/tmp /usr/bin/make DESTDIR=/build/buildd/libbpp-seq-2.0.3/debian/tmp install make[1]: Entering directory `/build/buildd/libbpp-seq-2.0.3' make[2]: Entering directory `/build/buildd/libbpp-seq-2.0.3' make[3]: Entering directory `/build/buildd/libbpp-seq-2.0.3' make[3]: Leaving directory `/build/buildd/libbpp-seq-2.0.3' [ 50%] Built target bppseq-shared make[3]: Entering directory `/build/buildd/libbpp-seq-2.0.3' make[3]: Leaving directory `/build/buildd/libbpp-seq-2.0.3' [100%] Built target bppseq-static make[2]: Leaving directory `/build/buildd/libbpp-seq-2.0.3' Install the project... -- Install configuration: "RelWithDebInfo" -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/lib/libbpp-seq.a -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/lib/libbpp-seq.so.9.1.2 -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/lib/libbpp-seq.so.9 -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/lib/libbpp-seq.so -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/SequenceWithQualityTools.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/SymbolList.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/CodonSiteTools.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Sequence.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/GeneticCode -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/GeneticCode/StandardGeneticCode.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/GeneticCode/EchinodermMitochondrialGeneticCode.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/GeneticCode/InvertebrateMitochondrialGeneticCode.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/GeneticCode/VertebrateMitochondrialGeneticCode.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/GeneticCode/GeneticCode.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/GeneticCode/YeastMitochondrialGeneticCode.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/MafAlignmentParser.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/AbstractISequence.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/MaseTools.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/NexusIoSequence.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/NexusTools.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/ISequence.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/Phylip.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/Mase.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/IoSequenceStream.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/ISequenceStream.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/OSequence.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/Dcse.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/Clustal.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/PhredPoly.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/Stockholm.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/Fastq.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/MafIterator.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/Fasta.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/IoSequence.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/GenBank.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/IoSequenceFactory.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/PhredPhd.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/OSequenceStream.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/AbstractOSequence.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/AbstractISequence2.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io/SequenceFileIndex.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Transliterator.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/DNAToRNA.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/App.all -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Container -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Container/MapSequenceContainer.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Container/AbstractSequenceContainer.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Container/AlignedSequenceContainer.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Container/SiteContainerTools.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Container/SiteContainer.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Container/OrderedSequenceContainer.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Container/VectorSiteContainer.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Container/SiteIterator.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Container/VectorSequenceContainer.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Container/SequenceContainerTools.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Container/SiteContainerExceptions.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Container/SequenceContainerExceptions.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Container/CompressedVectorSiteContainer.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Container/SequenceContainer.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/SequenceWithAnnotationTools.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/SequenceTools.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/SequenceWithQuality.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StringSequenceTools.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/SiteTools.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/SiteExceptions.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/SequencePositionIterators.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/GeneticCode.all -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties.all -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/SymbolListTools.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Site.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Container.all -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/BinaryAlphabet.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/RNA.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/AlphabetExceptions.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/CodonAlphabet.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/AbstractAlphabet.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/VertebrateMitochondrialCodonAlphabet.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/StandardCodonAlphabet.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/Alphabet.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/EchinodermMitochondrialCodonAlphabet.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/ProteicAlphabetState.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/NucleicAlphabetState.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/DefaultAlphabet.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/ProteicAlphabet.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/AlphabetState.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/InvertebrateMitochondrialCodonAlphabet.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/NucleicAlphabet.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/WordAlphabet.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/CaseMaskedAlphabet.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/YeastMitochondrialCodonAlphabet.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/RNY.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/LetterAlphabet.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/DNA.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet/AlphabetTools.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/SequenceWalker.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/DistanceMatrix.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/App -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/App/SequenceApplicationTools.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/SequenceExceptions.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/NucleicAcidsReplication.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Alphabet.all -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/SequenceWithAnnotation.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Io.all -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/GranthamAAPolarityIndex.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/AlphabetIndex1.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/AAMassIndex.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/AAChenGuHuangHydrophobicityIndex.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/MiyataAAChemicalDistance.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/SimpleIndexDistance.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/AAIndex1Entry.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/AASEASup30Index.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/AAIndex2Entry.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/AAVolumeIndex.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/BLOSUM50.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/DefaultNucleotideScore.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/AAChargeIndex.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/AAChouFasmanTurnIndex.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/AAChouFasmanAHelixIndex.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/GranthamAAChemicalDistance.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/AASurfaceIndex.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/AASEA1030Index.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/SimpleScore.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/ChenGuHuangAAHydrophobicityIndex.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/GranthamAAVolumeIndex.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/AASEAInf10Index.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/AAChouFasmanBSheetIndex.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/KleinAANetChargeIndex.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/StateProperties/AlphabetIndex2.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Feature -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Feature/Gff -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Feature/Gff/GffFeatureReader.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq/Feature/SequenceFeature.h -- Installing: /build/buildd/libbpp-seq-2.0.3/debian/tmp/usr/include/Bpp/Seq.all make[1]: Leaving directory `/build/buildd/libbpp-seq-2.0.3' dh_testdir dh_testroot dh_installchangelogs ChangeLog dh_installdocs dh_installexamples dh_install dh_installman dh_link dh_strip dh_strip debug symbol extraction: all non-arch-all packages for this build platform armhf: libbpp-seq-dev libbpp-seq9 dh_strip debug symbol extraction: packages to act on: libbpp-seq-dev libbpp-seq9 dh_strip debug symbol extraction: ignored packages: libbpp-seq-dev is already stripped, ignoring dpkg-deb: building package `libbpp-seq9-dbgsym' in `../libbpp-seq9-dbgsym_2.0.3-1_armhf.ddeb'. dh_compress dh_fixperms dh_makeshlibs dh_installdeb dh_shlibdeps dpkg-shlibdeps: warning: symbol __aeabi_unwind_cpp_pr1@GCC_3.5 used by debian/libbpp-seq9/usr/lib/libbpp-seq.so.9.1.2 found in none of the libraries. dh_gencontrol dh_md5sums dh_builddeb INFO: pkgstriptranslations version 115 pkgstriptranslations: processing libbpp-seq-dev (in debian/libbpp-seq-dev); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libbpp-seq-dev/DEBIAN/control, package libbpp-seq-dev, directory debian/libbpp-seq-dev .. removing usr/share/doc/libbpp-seq-dev/changelog.gz Searching for duplicated docs in dependency libbpp-seq9... symlinking changelog.Debian.gz in libbpp-seq-dev to file in libbpp-seq9 pkgstripfiles: PNG optimization for package libbpp-seq-dev took 0 s dpkg-deb: warning: 'debian/libbpp-seq-dev/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `libbpp-seq-dev' in `../libbpp-seq-dev_2.0.3-1_armhf.deb'. INFO: pkgstriptranslations version 115 pkgstriptranslations: processing libbpp-seq9 (in debian/libbpp-seq9); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/libbpp-seq9/DEBIAN/control, package libbpp-seq9, directory debian/libbpp-seq9 .. removing usr/share/doc/libbpp-seq9/changelog.gz pkgstripfiles: PNG optimization for package libbpp-seq9 took 0 s dpkg-deb: warning: 'debian/libbpp-seq9/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `libbpp-seq9' in `../libbpp-seq9_2.0.3-1_armhf.deb'. dpkg-genchanges -B -mUbuntu/armel Build Daemon >../libbpp-seq_2.0.3-1_armhf.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build libbpp-seq-2.0.3 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20120301-1636 Publishing debug debs. chroot-autobuild/build/buildd/libbpp-seq-dev_2.0.3-1_armhf.deb: new debian package, version 2.0. size 1331192 bytes: control archive= 4105 bytes. 428 bytes, 12 lines control 10143 bytes, 126 lines md5sums Package: libbpp-seq-dev Source: libbpp-seq Version: 2.0.3-1 Architecture: armhf Maintainer: Ubuntu Developers Original-Maintainer: Loic Dachary Installed-Size: 5418 Depends: libbpp-seq9 (= 2.0.3-1), libbpp-core-dev (>= 2.0.3) Section: libdevel Priority: optional Description: Bio++ Sequence library development files. Contains the Bio++ classes for sequence analysis. chroot-autobuild/build/buildd/libbpp-seq9_2.0.3-1_armhf.deb: new debian package, version 2.0. size 458536 bytes: control archive= 747 bytes. 434 bytes, 12 lines control 212 bytes, 3 lines md5sums 135 bytes, 7 lines * postinst #!/bin/sh 132 bytes, 7 lines * postrm #!/bin/sh 25 bytes, 1 lines shlibs Package: libbpp-seq9 Source: libbpp-seq Version: 2.0.3-1 Architecture: armhf Maintainer: Ubuntu Developers Original-Maintainer: Loic Dachary Installed-Size: 1048 Depends: libbpp-core2 (>= 2.0.3), libc6 (>= 2.4), libgcc1 (>= 1:4.4.0), libstdc++6 (>= 4.6) Section: libs Priority: optional Description: Bio++ Sequence library. Contains the Bio++ classes for sequence analysis. chroot-autobuild/build/buildd/libbpp-seq-dev_2.0.3-1_armhf.deb: drwxr-xr-x root/root 0 2012-03-01 16:35 ./ drwxr-xr-x root/root 0 2012-03-01 16:34 ./usr/ drwxr-xr-x root/root 0 2012-03-01 16:34 ./usr/include/ drwxr-xr-x root/root 0 2012-03-01 16:34 ./usr/include/Bpp/ drwxr-xr-x root/root 0 2012-03-01 16:34 ./usr/include/Bpp/Seq/ -rw-r--r-- root/root 6313 2012-02-15 21:59 ./usr/include/Bpp/Seq/SequenceWithQualityTools.h -rw-r--r-- root/root 22732 2012-02-15 21:59 ./usr/include/Bpp/Seq/SymbolList.h -rw-r--r-- root/root 13204 2012-02-15 21:59 ./usr/include/Bpp/Seq/CodonSiteTools.h -rw-r--r-- root/root 15009 2012-02-15 21:59 ./usr/include/Bpp/Seq/Sequence.h drwxr-xr-x root/root 0 2012-03-01 16:34 ./usr/include/Bpp/Seq/GeneticCode/ -rw-r--r-- root/root 2484 2012-02-15 21:59 ./usr/include/Bpp/Seq/GeneticCode/StandardGeneticCode.h -rw-r--r-- root/root 2605 2012-02-15 21:59 ./usr/include/Bpp/Seq/GeneticCode/EchinodermMitochondrialGeneticCode.h 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21:59 ./usr/include/Bpp/Seq/StateProperties/MiyataAAChemicalDistance.h -rw-r--r-- root/root 4498 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/SimpleIndexDistance.h -rw-r--r-- root/root 3258 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/AAIndex1Entry.h -rw-r--r-- root/root 3573 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/AASEASup30Index.h -rw-r--r-- root/root 3811 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/AAIndex2Entry.h -rw-r--r-- root/root 3405 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/AAVolumeIndex.h -rw-r--r-- root/root 3169 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/BLOSUM50.h -rw-r--r-- root/root 3566 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/DefaultNucleotideScore.h -rw-r--r-- root/root 5026 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/AAChargeIndex.h -rw-r--r-- root/root 3463 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/AAChouFasmanTurnIndex.h -rw-r--r-- root/root 3542 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/AAChouFasmanAHelixIndex.h -rw-r--r-- root/root 5579 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/GranthamAAChemicalDistance.h -rw-r--r-- root/root 3442 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/AASurfaceIndex.h -rw-r--r-- root/root 3548 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/AASEA1030Index.h -rw-r--r-- root/root 3258 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/SimpleScore.h -rw-r--r-- root/root 4216 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/ChenGuHuangAAHydrophobicityIndex.h -rw-r--r-- root/root 4046 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/GranthamAAVolumeIndex.h -rw-r--r-- root/root 3575 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/AASEAInf10Index.h -rw-r--r-- root/root 3540 2012-02-15 21:59 ./usr/include/Bpp/Seq/StateProperties/AAChouFasmanBSheetIndex.h -rw-r--r-- root/root 4086 2012-02-15 21:59 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./usr/lib/libbpp-seq.so -> libbpp-seq.so.9 lrwxrwxrwx root/root 0 2012-03-01 16:35 ./usr/share/doc/libbpp-seq-dev/changelog.Debian.gz -> ../libbpp-seq9/changelog.Debian.gz chroot-autobuild/build/buildd/libbpp-seq9_2.0.3-1_armhf.deb: drwxr-xr-x root/root 0 2012-03-01 16:35 ./ drwxr-xr-x root/root 0 2012-03-01 16:34 ./usr/ drwxr-xr-x root/root 0 2012-03-01 16:35 ./usr/lib/ -rw-r--r-- root/root 1035668 2012-03-01 16:35 ./usr/lib/libbpp-seq.so.9.1.2 drwxr-xr-x root/root 0 2012-03-01 16:34 ./usr/share/ drwxr-xr-x root/root 0 2012-03-01 16:34 ./usr/share/doc/ drwxr-xr-x root/root 0 2012-03-01 16:36 ./usr/share/doc/libbpp-seq9/ -rw-r--r-- root/root 2980 2012-02-15 21:59 ./usr/share/doc/libbpp-seq9/copyright -rw-r--r-- root/root 660 2012-02-15 21:59 ./usr/share/doc/libbpp-seq9/changelog.Debian.gz lrwxrwxrwx root/root 0 2012-03-01 16:34 ./usr/lib/libbpp-seq.so.9 -> libbpp-seq.so.9.1.2 libbpp-seq_2.0.3-1_armhf.changes: Format: 1.8 Date: Thu, 09 Feb 2012 14:00:00 +0100 Source: libbpp-seq Binary: libbpp-seq-dev libbpp-seq9 Architecture: armhf Version: 2.0.3-1 Distribution: precise Urgency: low Maintainer: Ubuntu/armel Build Daemon Changed-By: Julien Dutheil Description: libbpp-seq-dev - Bio++ Sequence library development files. libbpp-seq9 - Bio++ Sequence library. Changes: libbpp-seq (2.0.3-1) unstable; urgency=low . * Bugs fixed in maf parser + new iterators * Added support for GFF * Added support for FastQ * Several bugs fixed Checksums-Sha1: 0ccde77fe1fc24e3839f9da9ef9ff0c2205b8480 1331192 libbpp-seq-dev_2.0.3-1_armhf.deb faa0548d77374556a3aa8a1bf745b5147ea8f1d4 458536 libbpp-seq9_2.0.3-1_armhf.deb Checksums-Sha256: 7ff2c89de5397454ce35f4bd82ddcca58cb402e3dab24fb3c6f5c02b159b68f3 1331192 libbpp-seq-dev_2.0.3-1_armhf.deb 39d119b05f1cba0f7de003925a44432fb72c77cda111af75829a294cfe5a6cc4 458536 libbpp-seq9_2.0.3-1_armhf.deb Files: 04f3bc4e7754a9a86eca21e744effe60 1331192 libdevel optional libbpp-seq-dev_2.0.3-1_armhf.deb 88ac53ba040089c9dd27b5286ec5f7b1 458536 libs optional libbpp-seq9_2.0.3-1_armhf.deb ****************************************************************************** Built successfully Purging chroot-autobuild/build/buildd/libbpp-seq-2.0.3 ------------------------------------------------------------------------------ /usr/bin/sudo dpkg --purge intltool-debian groff-base libcurl3 gettext file libxmlrpc-core-c3 html2text gettext-base debhelper po-debconf libunistring0 libarchive1 emacsen-common libcroco3 libmagic1 libbpp-core-dev libpipeline1 libxml2 libexpat1 cmake-data bsdmainutils libgettextpo0 man-db cmake libbpp-core2 (Reading database ... 14164 files and directories currently installed.) Removing debhelper ... Removing po-debconf ... Removing libbpp-core-dev ... Removing man-db ... Purging configuration files for man-db ... Removing catpages as well as /var/cache/man hierarchy. Removing cmake ... Removing libbpp-core2 ... Purging configuration files for libbpp-core2 ... Removing intltool-debian ... Removing groff-base ... Purging configuration files for groff-base ... Removing gettext ... Removing file ... Removing libxmlrpc-core-c3 ... Purging configuration files for libxmlrpc-core-c3 ... Removing html2text ... Purging configuration files for html2text ... Removing gettext-base ... Removing libarchive1 ... Purging configuration files for libarchive1 ... Removing libmagic1 ... Purging configuration files for libmagic1 ... Removing libpipeline1 ... Purging configuration files for libpipeline1 ... Removing libexpat1 ... Purging configuration files for libexpat1 ... Removing cmake-data ... Purging configuration files for cmake-data ... Removing libgettextpo0 ... 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Processing triggers for libc-bin ... ldconfig deferred processing now taking place ****************************************************************************** Finished at 20120301-1636 Build needed 01:32:12, 226448k disk space Can't open average time db /var/debbuild/avg-build-times Can't open average space db /var/debbuild/avg-build-space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['/usr/share/launchpad-buildd/slavebin/scan-for-processes', '57e50153f65ea799f1ee425ab4d34166fcc49295'] Scanning for processes to kill in build /home/buildd/build-57e50153f65ea799f1ee425ab4d34166fcc49295/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', '57e50153f65ea799f1ee425ab4d34166fcc49295'] Unmounting chroot for build 57e50153f65ea799f1ee425ab4d34166fcc49295... none /home/buildd/build-57e50153f65ea799f1ee425ab4d34166fcc49295/chroot-autobuild/proc proc rw,relatime 0 0 none /home/buildd/build-57e50153f65ea799f1ee425ab4d34166fcc49295/chroot-autobuild/dev/pts devpts rw,relatime,mode=600,ptmxmode=000 0 0 none /home/buildd/build-57e50153f65ea799f1ee425ab4d34166fcc49295/chroot-autobuild/sys sysfs rw,relatime 0 0 none /home/buildd/build-57e50153f65ea799f1ee425ab4d34166fcc49295/chroot-autobuild/dev/shm tmpfs rw,relatime 0 0 RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', '57e50153f65ea799f1ee425ab4d34166fcc49295'] Removing build 57e50153f65ea799f1ee425ab4d34166fcc49295