gubbins 2.4.1-5 source package in Ubuntu
Changelog
gubbins (2.4.1-5) unstable; urgency=medium
* Team Upload.
[ Andreas Tille ]
* New upstream version
* Standards-Version: 4.6.0 (routine-update)
* Build-Depends: python3-scipy <!nocheck>, python3-multiprocess <!nocheck>,
python3-wheel <!nocheck>
* Remove trailing whitespace in debian/changelog (routine-update)
* Adapt test to iqtree2
Closes: #1005476
[ Étienne Mollier ]
* d/control: update uploader address
* d/watch: bump to uscan version 4 and fix broken link to github
[ Nilesh Patra ]
* Switch from nosetest -> pytest
-- Andreas Tille <email address hidden> Sun, 13 Feb 2022 15:17:59 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Lunar | release | universe | misc | |
| Jammy | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| gubbins_2.4.1-5.dsc | 2.2 KiB | 114fef8067cb0496b40038aec04da1f1e14c3722beaf4d35b96f9da618fab657 |
| gubbins_2.4.1.orig.tar.gz | 595.5 KiB | df0f6f475ef402d6f2f67abb870dcb2c59f3333bf6a00af76251bb102f63e17b |
| gubbins_2.4.1-5.debian.tar.xz | 7.6 KiB | 75930a6941347dbbff34c11efcb00d10f5afee3c7e549e5c39a6edeca4bfa45c |
Available diffs
- diff from 2.4.1-4 to 2.4.1-5 (2.1 KiB)
No changes file available.
Binary packages built by this source
- gubbins: phylogenetic analysis of genome sequences
Gubbins supports rapid phylogenetic analysis of large samples of
recombinant bacterial whole genome sequences.
.
Gubbins (Genealogies Unbiased By recomBinations In Nucleotide
Sequences) is an algorithm that iteratively identifies loci containing
elevated densities of base substitutions while concurrently constructing
a phylogeny based on the putative point mutations outside of these
regions. Simulations demonstrate the algorithm generates highly accurate
reconstructions under realistic models of short-term bacterial
evolution, and can be run in only a few hours on alignments of hundreds
of bacterial genome sequences.
- gubbins-dbgsym: No summary available for gubbins-dbgsym in ubuntu kinetic.
No description available for gubbins-dbgsym in ubuntu kinetic.
