gmap 2023-10-10+ds-1 source package in Ubuntu
Changelog
gmap (2023-10-10+ds-1) unstable; urgency=medium * New upstream version -- Étienne Mollier <email address hidden> Sat, 14 Oct 2023 20:21:01 +0200
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- amd64 arm64 armel armhf i386 mips64el mipsel ppc64el riscv64
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| gmap_2023-10-10+ds-1.dsc | 2.2 KiB | de595b3c911c5f5a7574d11d8110a2fc68a7919634c11aaa8986155941aa0e9e |
| gmap_2023-10-10+ds.orig.tar.xz | 2.3 MiB | 02368b1ffa6ce30173ba8d24e5e14b125affe1cdb8014a0cfc651180537a85c5 |
| gmap_2023-10-10+ds-1.debian.tar.xz | 13.4 KiB | 5dfec81d1cdf3e39a750ddf7992c46e8ddd1d054817afcc35aeab1d3503e8a1b |
Available diffs
- diff from 2021-12-17+ds-3 to 2023-10-10+ds-1 (1.1 MiB)
- diff from 2023-07-20+ds-1 to 2023-10-10+ds-1 (159.4 KiB)
No changes file available.
Binary packages built by this source
- gmap: spliced and SNP-tolerant alignment for mRNA and short reads
This package contains the programs GMAP and GSNAP as well as
utilities to manage genome databases in GMAP/GSNAP format.
GMAP (Genomic Mapping and Alignment Program) is a tool for aligning
EST, mRNA and cDNA sequences.
GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for
aligning single-end and paired-end transcriptome reads.
Both tools can use a database of
* known splice sites and identify novel splice sites.
* known single-nucleotide polymorphisms (SNPs).
GSNAP can align bisulfite-treated DNA.
- gmap-dbgsym: debug symbols for gmap
