https://launchpad.net/ubuntu/+source/ball/1.5.0+git20180813.37fc53c-11build5/+build/27972628 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-arm64-025 5.4.0-176-generic #196-Ubuntu SMP Fri Mar 22 16:46:20 UTC 2024 aarch64 Buildd toolchain package versions: launchpad-buildd_236~650~ubuntu20.04.1 python3-lpbuildd_236~650~ubuntu20.04.1 sbuild_0.79.0-1ubuntu1 git-build-recipe_0.3.6 git_1:2.25.1-1ubuntu3.11 dpkg-dev_1.19.7ubuntu3.2 python3-debian_0.1.36ubuntu1.1. Syncing the system clock with the buildd NTP service... 10 Apr 21:53:33 ntpdate[1891]: adjust time server 10.211.37.1 offset -0.006032 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-27972628 --image-type chroot /home/buildd/filecache-default/59612f0fc5bae33f6226b6e60c2e882b82c04bd0 Creating target for build PACKAGEBUILD-27972628 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-27972628 Starting target for build PACKAGEBUILD-27972628 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-27972628 'deb http://ftpmaster.internal/ubuntu noble main universe' 'deb http://ftpmaster.internal/ubuntu noble-security main universe' 'deb http://ftpmaster.internal/ubuntu noble-updates main universe' 'deb http://ftpmaster.internal/ubuntu noble-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-27972628 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-27972628 Updating target for build PACKAGEBUILD-27972628 Get:1 http://ftpmaster.internal/ubuntu noble InRelease [255 kB] Get:2 http://ftpmaster.internal/ubuntu noble-security InRelease [90.7 kB] Get:3 http://ftpmaster.internal/ubuntu noble-updates InRelease [89.7 kB] Get:4 http://ftpmaster.internal/ubuntu noble-proposed InRelease [117 kB] Get:5 http://ftpmaster.internal/ubuntu noble/main armhf Packages [1325 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main Translation-en [511 kB] Get:7 http://ftpmaster.internal/ubuntu noble/universe armhf Packages [14.9 MB] Get:8 http://ftpmaster.internal/ubuntu noble/universe Translation-en [6071 kB] Get:9 http://ftpmaster.internal/ubuntu noble-updates/universe armhf Packages [2880 B] Get:10 http://ftpmaster.internal/ubuntu noble-updates/universe Translation-en [948 B] Get:11 http://ftpmaster.internal/ubuntu noble-proposed/main armhf Packages [322 kB] Get:12 http://ftpmaster.internal/ubuntu noble-proposed/main Translation-en [139 kB] Get:13 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf Packages [664 kB] Get:14 http://ftpmaster.internal/ubuntu noble-proposed/universe Translation-en [285 kB] Fetched 24.7 MB in 17s (1444 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libnsl-dev libtirpc-dev libunistring2 perl-modules-5.36 Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libapt-pkg6.0* libdb5.3* libext2fs2* libgdbm-compat4* libgdbm6* libgnutls30* libhogweed6* libnettle8* libnpth0* libperl5.36* libpng16-16* libreadline8* libssl3* libtirpc3* usrmerge* The following NEW packages will be installed: cpp-13-arm-linux-gnueabihf cpp-arm-linux-gnueabihf g++-13-arm-linux-gnueabihf g++-arm-linux-gnueabihf gcc-13-arm-linux-gnueabihf gcc-14-base gcc-arm-linux-gnueabihf libapt-pkg6.0t64 libdb5.3t64 libext2fs2t64 libgdbm-compat4t64 libgdbm6t64 libgnutls30t64 libhogweed6t64 libnettle8t64 libnpth0t64 libperl5.38t64 libpng16-16t64 libreadline8t64 libssl3t64 libtirpc3t64 libunistring5 perl-modules-5.38 The following packages will be upgraded: advancecomp apt apt-utils base-files base-passwd bash bash-completion binutils binutils-arm-linux-gnueabihf binutils-common bsdextrautils bsdutils bzip2 ca-certificates coreutils cpp cpp-13 dash debconf debconf-i18n debianutils diffutils dpkg dpkg-dev e2fsprogs fakeroot findutils g++ g++-13 gcc gcc-13 gcc-13-base gpg gpg-agent gpgconf gpgv grep gzip hostname init init-system-helpers krb5-locales libacl1 libapparmor1 libargon2-1 libasan8 libassuan0 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdebconfclient0 libdevmapper1.02.1 libdpkg-perl libfakeroot libfdisk1 libffi8 libgcc-13-dev libgcc-s1 libgcrypt20 libgmp10 libgomp1 libgpg-error-l10n libgpg-error0 libgpm2 libgssapi-krb5-2 libidn2-0 libip4tc2 libisl23 libjansson4 libjson-c5 libk5crypto3 libkeyutils1 libkmod2 libkrb5-3 libkrb5support0 liblocale-gettext-perl liblockfile-bin liblockfile1 liblz4-1 liblzma5 libmd0 libmount1 libmpc3 libmpfr6 libncursesw6 libnsl-dev libnsl2 libnss-nisplus libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libproc2-0 libseccomp2 libselinux1 libsemanage-common libsemanage2 libsepol2 libsframe1 libsmartcols1 libsqlite3-0 libss2 libstdc++-13-dev libstdc++6 libsystemd-shared libsystemd0 libtasn1-6 libtext-charwidth-perl libtext-iconv-perl libtinfo6 libtirpc-common libtirpc-dev libubsan1 libudev1 libuuid1 libxxhash0 libzstd1 linux-libc-dev lockfile-progs login logsave lto-disabled-list make mawk mount ncurses-base ncurses-bin openssl optipng passwd patch perl perl-base pinentry-curses procps psmisc readline-common rpcsvc-proto sed sensible-utils systemd systemd-dev systemd-sysv sysvinit-utils tar tzdata ubuntu-keyring util-linux uuid-runtime xz-utils zlib1g 170 upgraded, 23 newly installed, 15 to remove and 0 not upgraded. Need to get 98.8 MB of archives. After this operation, 24.6 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu noble/main armhf libnsl-dev armhf 1.3.0-3build3 [66.2 kB] Get:2 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libcrypt-dev armhf 1:4.4.36-4build1 [120 kB] Get:3 http://ftpmaster.internal/ubuntu noble-proposed/main armhf rpcsvc-proto armhf 1.4.2-0ubuntu7 [62.2 kB] Get:4 http://ftpmaster.internal/ubuntu noble/main armhf libc6-dev armhf 2.39-0ubuntu8 [1352 kB] Get:5 http://ftpmaster.internal/ubuntu noble/main armhf libc-dev-bin armhf 2.39-0ubuntu8 [19.1 kB] Get:6 http://ftpmaster.internal/ubuntu noble/main armhf libtirpc-common all 1.3.4+ds-1.1build1 [8094 B] Get:7 http://ftpmaster.internal/ubuntu noble/main armhf libtirpc-dev armhf 1.3.4+ds-1.1build1 [184 kB] Get:8 http://ftpmaster.internal/ubuntu noble/universe armhf libnss-nisplus armhf 1.3-5build1 [20.1 kB] Get:9 http://ftpmaster.internal/ubuntu noble/main armhf libnsl2 armhf 1.3.0-3build3 [36.5 kB] Get:10 http://ftpmaster.internal/ubuntu noble/main armhf libgssapi-krb5-2 armhf 1.20.1-6ubuntu2 [119 kB] Get:11 http://ftpmaster.internal/ubuntu noble/main armhf libkrb5-3 armhf 1.20.1-6ubuntu2 [321 kB] Get:12 http://ftpmaster.internal/ubuntu noble/main armhf libk5crypto3 armhf 1.20.1-6ubuntu2 [78.6 kB] Get:13 http://ftpmaster.internal/ubuntu noble/main armhf libkrb5support0 armhf 1.20.1-6ubuntu2 [31.4 kB] Get:14 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libacl1 armhf 2.3.2-1build1 [15.1 kB] Get:15 http://ftpmaster.internal/ubuntu noble/main armhf libapparmor1 armhf 4.0.0-beta3-0ubuntu3 [45.1 kB] Get:16 http://ftpmaster.internal/ubuntu noble/main armhf libaudit-common all 1:3.1.2-2.1build1 [5736 B] Get:17 http://ftpmaster.internal/ubuntu noble/main armhf libcap-ng0 armhf 0.8.4-2build2 [13.6 kB] Get:18 http://ftpmaster.internal/ubuntu noble/main armhf libaudit1 armhf 1:3.1.2-2.1build1 [44.4 kB] Get:19 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libblkid1 armhf 2.39.3-9ubuntu5 [160 kB] Get:20 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libcap2 armhf 1:2.66-5ubuntu2 [25.8 kB] Get:21 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libcrypt1 armhf 1:4.4.36-4build1 [92.6 kB] Get:22 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgpg-error-l10n all 1.47-3build2 [8064 B] Get:23 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgpg-error0 armhf 1.47-3build2 [61.6 kB] Get:24 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgcrypt20 armhf 1.10.3-2build1 [454 kB] Get:25 http://ftpmaster.internal/ubuntu noble/main armhf liblzma5 armhf 5.6.1+really5.4.5-1 [111 kB] Get:26 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libzstd1 armhf 1.5.5+dfsg2-2build1 [265 kB] Get:27 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libkmod2 armhf 31+20240202-2ubuntu6 [45.0 kB] Get:28 http://ftpmaster.internal/ubuntu noble-proposed/main armhf liblz4-1 armhf 1.9.4-1build1 [58.0 kB] Get:29 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libpcre2-8-0 armhf 10.42-4ubuntu2 [198 kB] Get:30 http://ftpmaster.internal/ubuntu noble/main armhf libselinux1 armhf 3.5-2ubuntu2 [70.9 kB] Get:31 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libmount1 armhf 2.39.3-9ubuntu5 [171 kB] Get:32 http://ftpmaster.internal/ubuntu noble/main armhf libtext-iconv-perl armhf 1.7-8build3 [12.7 kB] Get:33 http://ftpmaster.internal/ubuntu noble/main armhf libtext-charwidth-perl armhf 0.04-11build3 [8992 B] Get:34 http://ftpmaster.internal/ubuntu noble/main armhf perl-modules-5.38 all 5.38.2-3.2build2 [3110 kB] Get:35 http://ftpmaster.internal/ubuntu noble/main armhf libdb5.3t64 armhf 5.3.28+dfsg2-6build1 [661 kB] Get:36 http://ftpmaster.internal/ubuntu noble/main armhf libgdbm6t64 armhf 1.23-5.1build1 [30.3 kB] Get:37 http://ftpmaster.internal/ubuntu noble/main armhf libgdbm-compat4t64 armhf 1.23-5.1build1 [6216 B] Get:38 http://ftpmaster.internal/ubuntu noble/main armhf libperl5.38t64 armhf 5.38.2-3.2build2 [4109 kB] Get:39 http://ftpmaster.internal/ubuntu noble/main armhf perl armhf 5.38.2-3.2build2 [231 kB] Get:40 http://ftpmaster.internal/ubuntu noble/main armhf perl-base armhf 5.38.2-3.2build2 [1671 kB] Get:41 http://ftpmaster.internal/ubuntu noble/main armhf liblocale-gettext-perl armhf 1.07-6ubuntu5 [15.1 kB] Get:42 http://ftpmaster.internal/ubuntu noble/main armhf libc6 armhf 2.39-0ubuntu8 [2828 kB] Get:43 http://ftpmaster.internal/ubuntu noble/main armhf libc-bin armhf 2.39-0ubuntu8 [530 kB] Get:44 http://ftpmaster.internal/ubuntu noble/main armhf openssl armhf 3.0.13-0ubuntu3 [974 kB] Get:45 http://ftpmaster.internal/ubuntu noble/main armhf libsystemd-shared armhf 255.4-1ubuntu7 [2010 kB] Get:46 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libcryptsetup12 armhf 2:2.7.0-1ubuntu4 [238 kB] Get:47 http://ftpmaster.internal/ubuntu noble/main armhf libssl3t64 armhf 3.0.13-0ubuntu3 [1558 kB] Get:48 http://ftpmaster.internal/ubuntu noble/main armhf systemd-dev all 255.4-1ubuntu7 [104 kB] Get:49 http://ftpmaster.internal/ubuntu noble/main armhf systemd-sysv armhf 255.4-1ubuntu7 [11.9 kB] Get:50 http://ftpmaster.internal/ubuntu noble/main armhf systemd armhf 255.4-1ubuntu7 [3502 kB] Get:51 http://ftpmaster.internal/ubuntu noble/main armhf libsystemd0 armhf 255.4-1ubuntu7 [411 kB] Get:52 http://ftpmaster.internal/ubuntu noble/main armhf libpam-modules-bin armhf 1.5.3-5ubuntu4 [47.1 kB] Get:53 http://ftpmaster.internal/ubuntu noble/main armhf libpam-modules armhf 1.5.3-5ubuntu4 [260 kB] Get:54 http://ftpmaster.internal/ubuntu noble/main armhf libapt-pkg6.0t64 armhf 2.7.14build2 [986 kB] Get:55 http://ftpmaster.internal/ubuntu noble/main armhf libnettle8t64 armhf 3.9.1-2.2build1 [187 kB] Get:56 http://ftpmaster.internal/ubuntu noble/main armhf libhogweed6t64 armhf 3.9.1-2.2build1 [187 kB] Get:57 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libp11-kit0 armhf 0.25.3-4ubuntu2 [258 kB] Get:58 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libunistring5 armhf 1.1-2build1 [513 kB] Get:59 http://ftpmaster.internal/ubuntu noble/main armhf libgnutls30t64 armhf 3.8.3-1.1ubuntu3 [947 kB] Get:60 http://ftpmaster.internal/ubuntu noble/main armhf apt armhf 2.7.14build2 [1368 kB] Get:61 http://ftpmaster.internal/ubuntu noble/main armhf apt-utils armhf 2.7.14build2 [210 kB] Get:62 http://ftpmaster.internal/ubuntu noble-proposed/main armhf bzip2 armhf 1.0.8-5.1 [33.5 kB] Get:63 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libbz2-1.0 armhf 1.0.8-5.1 [31.1 kB] Get:64 http://ftpmaster.internal/ubuntu noble/main armhf zlib1g armhf 1:1.3.dfsg-3.1ubuntu2 [49.2 kB] Get:65 http://ftpmaster.internal/ubuntu noble/main armhf debconf-i18n all 1.5.86 [205 kB] Get:66 http://ftpmaster.internal/ubuntu noble/main armhf debconf all 1.5.86 [124 kB] Get:67 http://ftpmaster.internal/ubuntu noble/main armhf libpam0g armhf 1.5.3-5ubuntu4 [62.0 kB] Get:68 http://ftpmaster.internal/ubuntu noble/main armhf libseccomp2 armhf 2.5.5-1ubuntu3 [49.5 kB] Get:69 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libargon2-1 armhf 0~20190702+dfsg-4build1 [22.6 kB] Get:70 http://ftpmaster.internal/ubuntu noble/main armhf libudev1 armhf 255.4-1ubuntu7 [166 kB] Get:71 http://ftpmaster.internal/ubuntu noble/main armhf libdevmapper1.02.1 armhf 2:1.02.185-3ubuntu3 [135 kB] Get:72 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libjson-c5 armhf 0.17-1build1 [31.3 kB] Get:73 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libuuid1 armhf 2.39.3-9ubuntu5 [34.6 kB] Get:74 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libfdisk1 armhf 2.39.3-9ubuntu5 [196 kB] Get:75 http://ftpmaster.internal/ubuntu noble-proposed/main armhf mount armhf 2.39.3-9ubuntu5 [133 kB] Get:76 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libcom-err2 armhf 1.47.0-2.4~exp1ubuntu4 [21.9 kB] Get:77 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libkeyutils1 armhf 1.6.3-3build1 [8236 B] Get:78 http://ftpmaster.internal/ubuntu noble/main armhf libtirpc3t64 armhf 1.3.4+ds-1.1build1 [73.3 kB] Get:79 http://ftpmaster.internal/ubuntu noble/main armhf linux-libc-dev armhf 6.8.0-22.22 [1555 kB] Get:80 http://ftpmaster.internal/ubuntu noble/main armhf gcc-14-base armhf 14-20240330-1ubuntu2 [47.4 kB] Get:81 http://ftpmaster.internal/ubuntu noble/main armhf libgcc-s1 armhf 14-20240330-1ubuntu2 [41.5 kB] Get:82 http://ftpmaster.internal/ubuntu noble/main armhf base-files armhf 13ubuntu9 [73.4 kB] Get:83 http://ftpmaster.internal/ubuntu noble/main armhf debianutils armhf 5.17build1 [89.0 kB] Get:84 http://ftpmaster.internal/ubuntu noble/main armhf bash armhf 5.2.21-2ubuntu4 [668 kB] Get:85 http://ftpmaster.internal/ubuntu noble-proposed/main armhf bsdutils armhf 1:2.39.3-9ubuntu5 [102 kB] Get:86 http://ftpmaster.internal/ubuntu noble/main armhf coreutils armhf 9.4-3ubuntu6 [1280 kB] Get:87 http://ftpmaster.internal/ubuntu noble/main armhf libstdc++6 armhf 14-20240330-1ubuntu2 [714 kB] Get:88 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxxhash0 armhf 0.8.2-2build1 [31.5 kB] Get:89 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgmp10 armhf 2:6.3.0+dfsg-2ubuntu5 [210 kB] Get:90 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libffi8 armhf 3.4.6-1build1 [21.2 kB] Get:91 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libidn2-0 armhf 2.3.7-2build1 [96.2 kB] Get:92 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libtasn1-6 armhf 4.19.0-3build1 [37.2 kB] Get:93 http://ftpmaster.internal/ubuntu noble/main armhf libdebconfclient0 armhf 0.271ubuntu3 [10.9 kB] Get:94 http://ftpmaster.internal/ubuntu noble-proposed/main armhf base-passwd armhf 3.6.3build1 [50.9 kB] Get:95 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libassuan0 armhf 2.5.6-1build1 [31.3 kB] Get:96 http://ftpmaster.internal/ubuntu noble/main armhf libsqlite3-0 armhf 3.45.1-1ubuntu2 [590 kB] Get:97 http://ftpmaster.internal/ubuntu noble/main armhf gpg armhf 2.4.4-2ubuntu17 [524 kB] Get:98 http://ftpmaster.internal/ubuntu noble/main armhf gpg-agent armhf 2.4.4-2ubuntu17 [235 kB] Get:99 http://ftpmaster.internal/ubuntu noble/main armhf gpgconf armhf 2.4.4-2ubuntu17 [115 kB] Get:100 http://ftpmaster.internal/ubuntu noble/main armhf readline-common all 8.2-4build1 [56.5 kB] Get:101 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libncursesw6 armhf 6.4+20240113-1ubuntu2 [119 kB] Get:102 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libtinfo6 armhf 6.4+20240113-1ubuntu2 [90.8 kB] Get:103 http://ftpmaster.internal/ubuntu noble/main armhf libreadline8t64 armhf 8.2-4build1 [129 kB] Get:104 http://ftpmaster.internal/ubuntu noble/main armhf pinentry-curses armhf 1.2.1-3ubuntu5 [36.7 kB] Get:105 http://ftpmaster.internal/ubuntu noble/main armhf init-system-helpers all 1.66ubuntu1 [39.4 kB] Get:106 http://ftpmaster.internal/ubuntu noble/main armhf libnpth0t64 armhf 1.6-3.1build1 [6998 B] Get:107 http://ftpmaster.internal/ubuntu noble/main armhf gpgv armhf 2.4.4-2ubuntu17 [224 kB] Get:108 http://ftpmaster.internal/ubuntu noble/main armhf ubuntu-keyring all 2023.11.28.1 [11.1 kB] Get:109 http://ftpmaster.internal/ubuntu noble-proposed/main armhf tar armhf 1.35+dfsg-3build1 [236 kB] Get:110 http://ftpmaster.internal/ubuntu noble/main armhf dpkg armhf 1.22.6ubuntu6 [1230 kB] Get:111 http://ftpmaster.internal/ubuntu noble/main armhf dash armhf 0.5.12-6ubuntu5 [80.8 kB] Get:112 http://ftpmaster.internal/ubuntu noble-proposed/main armhf diffutils armhf 1:3.10-1build1 [167 kB] Get:113 http://ftpmaster.internal/ubuntu noble-proposed/main armhf findutils armhf 4.9.0-5build1 [293 kB] Get:114 http://ftpmaster.internal/ubuntu noble-proposed/main armhf grep armhf 3.11-4build1 [157 kB] Get:115 http://ftpmaster.internal/ubuntu noble-proposed/main armhf gzip armhf 1.12-1ubuntu3 [95.8 kB] Get:116 http://ftpmaster.internal/ubuntu noble-proposed/main armhf hostname armhf 3.23+nmu2ubuntu2 [10.4 kB] Get:117 http://ftpmaster.internal/ubuntu noble-proposed/main armhf login armhf 1:4.13+dfsg1-4ubuntu3 [200 kB] Get:118 http://ftpmaster.internal/ubuntu noble-proposed/main armhf ncurses-bin armhf 6.4+20240113-1ubuntu2 [178 kB] Get:119 http://ftpmaster.internal/ubuntu noble-proposed/main armhf sed armhf 4.9-2build1 [190 kB] Get:120 http://ftpmaster.internal/ubuntu noble-proposed/main armhf util-linux armhf 2.39.3-9ubuntu5 [1216 kB] Get:121 http://ftpmaster.internal/ubuntu noble-proposed/main armhf ncurses-base all 6.4+20240113-1ubuntu2 [25.5 kB] Get:122 http://ftpmaster.internal/ubuntu noble-proposed/main armhf sysvinit-utils armhf 3.08-6ubuntu3 [33.8 kB] Get:123 http://ftpmaster.internal/ubuntu noble-proposed/main armhf logsave armhf 1.47.0-2.4~exp1ubuntu4 [22.0 kB] Get:124 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libext2fs2t64 armhf 1.47.0-2.4~exp1ubuntu4 [202 kB] Get:125 http://ftpmaster.internal/ubuntu noble-proposed/main armhf e2fsprogs armhf 1.47.0-2.4~exp1ubuntu4 [571 kB] Get:126 http://ftpmaster.internal/ubuntu noble/main armhf optipng armhf 0.7.8+ds-1build2 [109 kB] Get:127 http://ftpmaster.internal/ubuntu noble/main armhf libpng16-16t64 armhf 1.6.43-5build1 [166 kB] Get:128 http://ftpmaster.internal/ubuntu noble/main armhf init armhf 1.66ubuntu1 [6186 B] Get:129 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libsmartcols1 armhf 2.39.3-9ubuntu5 [117 kB] Get:130 http://ftpmaster.internal/ubuntu noble-proposed/main armhf uuid-runtime armhf 2.39.3-9ubuntu5 [41.8 kB] Get:131 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libattr1 armhf 1:2.5.2-1build1 [10.2 kB] Get:132 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libmd0 armhf 1.1.0-2build1 [23.0 kB] Get:133 http://ftpmaster.internal/ubuntu noble/main armhf libpam-runtime all 1.5.3-5ubuntu4 [40.8 kB] Get:134 http://ftpmaster.internal/ubuntu noble/main armhf libsemanage-common all 3.5-1build5 [10.1 kB] Get:135 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libsepol2 armhf 3.5-2build1 [263 kB] Get:136 http://ftpmaster.internal/ubuntu noble/main armhf libsemanage2 armhf 3.5-1build5 [84.5 kB] Get:137 http://ftpmaster.internal/ubuntu noble-proposed/main armhf passwd armhf 1:4.13+dfsg1-4ubuntu3 [817 kB] Get:138 http://ftpmaster.internal/ubuntu noble/main armhf libproc2-0 armhf 2:4.0.4-4ubuntu3 [49.0 kB] Get:139 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libss2 armhf 1.47.0-2.4~exp1ubuntu4 [14.7 kB] Get:140 http://ftpmaster.internal/ubuntu noble-proposed/main armhf mawk armhf 1.3.4.20240123-1build1 [115 kB] Get:141 http://ftpmaster.internal/ubuntu noble/main armhf procps armhf 2:4.0.4-4ubuntu3 [700 kB] Get:142 http://ftpmaster.internal/ubuntu noble/main armhf sensible-utils all 0.0.22 [22.5 kB] Get:143 http://ftpmaster.internal/ubuntu noble/main armhf ca-certificates all 20240203 [159 kB] Get:144 http://ftpmaster.internal/ubuntu noble/main armhf krb5-locales all 1.20.1-6ubuntu2 [13.8 kB] Get:145 http://ftpmaster.internal/ubuntu noble-proposed/main armhf tzdata all 2024a-2ubuntu1 [273 kB] Get:146 http://ftpmaster.internal/ubuntu noble/main armhf bash-completion all 1:2.11-8 [180 kB] Get:147 http://ftpmaster.internal/ubuntu noble-proposed/main armhf bsdextrautils armhf 2.39.3-9ubuntu5 [78.8 kB] Get:148 http://ftpmaster.internal/ubuntu noble/main armhf libgpm2 armhf 1.20.7-11 [13.6 kB] Get:149 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libip4tc2 armhf 1.8.10-3ubuntu2 [21.3 kB] Get:150 http://ftpmaster.internal/ubuntu noble/main armhf libjansson4 armhf 2.14-2build2 [28.2 kB] Get:151 http://ftpmaster.internal/ubuntu noble/main armhf psmisc armhf 23.7-1build1 [176 kB] Get:152 http://ftpmaster.internal/ubuntu noble/main armhf xz-utils armhf 5.6.1+really5.4.5-1 [267 kB] Get:153 http://ftpmaster.internal/ubuntu noble/main armhf advancecomp armhf 2.5-1build1 [198 kB] Get:154 http://ftpmaster.internal/ubuntu noble/main armhf libctf0 armhf 2.42-4ubuntu2 [87.7 kB] Get:155 http://ftpmaster.internal/ubuntu noble/main armhf libctf-nobfd0 armhf 2.42-4ubuntu2 [88.0 kB] Get:156 http://ftpmaster.internal/ubuntu noble/main armhf binutils-arm-linux-gnueabihf armhf 2.42-4ubuntu2 [2925 kB] Get:157 http://ftpmaster.internal/ubuntu noble/main armhf libbinutils armhf 2.42-4ubuntu2 [460 kB] Get:158 http://ftpmaster.internal/ubuntu noble/main armhf binutils armhf 2.42-4ubuntu2 [3072 B] Get:159 http://ftpmaster.internal/ubuntu noble/main armhf binutils-common armhf 2.42-4ubuntu2 [217 kB] Get:160 http://ftpmaster.internal/ubuntu noble/main armhf libsframe1 armhf 2.42-4ubuntu2 [13.1 kB] Get:161 http://ftpmaster.internal/ubuntu noble/main armhf libubsan1 armhf 14-20240330-1ubuntu2 [1153 kB] Get:162 http://ftpmaster.internal/ubuntu noble/main armhf libgomp1 armhf 14-20240330-1ubuntu2 [125 kB] Get:163 http://ftpmaster.internal/ubuntu noble/main armhf libatomic1 armhf 14-20240330-1ubuntu2 [7846 B] Get:164 http://ftpmaster.internal/ubuntu noble/main armhf libasan8 armhf 14-20240330-1ubuntu2 [2940 kB] Get:165 http://ftpmaster.internal/ubuntu noble/main armhf g++-13 armhf 13.2.0-23ubuntu3 [14.5 kB] Get:166 http://ftpmaster.internal/ubuntu noble/main armhf gcc-13 armhf 13.2.0-23ubuntu3 [450 kB] Get:167 http://ftpmaster.internal/ubuntu noble/main armhf libstdc++-13-dev armhf 13.2.0-23ubuntu3 [2455 kB] Get:168 http://ftpmaster.internal/ubuntu noble/main armhf libgcc-13-dev armhf 13.2.0-23ubuntu3 [899 kB] Get:169 http://ftpmaster.internal/ubuntu noble/main armhf libcc1-0 armhf 14-20240330-1ubuntu2 [39.1 kB] Get:170 http://ftpmaster.internal/ubuntu noble/main armhf cpp-13 armhf 13.2.0-23ubuntu3 [1034 B] Get:171 http://ftpmaster.internal/ubuntu noble/main armhf gcc-13-base armhf 13.2.0-23ubuntu3 [48.6 kB] Get:172 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libisl23 armhf 0.26-3build1 [544 kB] Get:173 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libmpfr6 armhf 4.2.1-1build1 [229 kB] Get:174 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libmpc3 armhf 1.3.1-1build1 [46.7 kB] Get:175 http://ftpmaster.internal/ubuntu noble/main armhf gcc-13-arm-linux-gnueabihf armhf 13.2.0-23ubuntu3 [16.8 MB] Get:176 http://ftpmaster.internal/ubuntu noble/main armhf g++-13-arm-linux-gnueabihf armhf 13.2.0-23ubuntu3 [9939 kB] Get:177 http://ftpmaster.internal/ubuntu noble/main armhf cpp-13-arm-linux-gnueabihf armhf 13.2.0-23ubuntu3 [8759 kB] Get:178 http://ftpmaster.internal/ubuntu noble-proposed/main armhf g++ armhf 4:13.2.0-7ubuntu2 [1084 B] Get:179 http://ftpmaster.internal/ubuntu noble-proposed/main armhf gcc armhf 4:13.2.0-7ubuntu2 [5018 B] Get:180 http://ftpmaster.internal/ubuntu noble-proposed/main armhf cpp armhf 4:13.2.0-7ubuntu2 [22.4 kB] Get:181 http://ftpmaster.internal/ubuntu noble-proposed/main armhf cpp-arm-linux-gnueabihf armhf 4:13.2.0-7ubuntu2 [5410 B] Get:182 http://ftpmaster.internal/ubuntu noble-proposed/main armhf gcc-arm-linux-gnueabihf armhf 4:13.2.0-7ubuntu2 [1214 B] Get:183 http://ftpmaster.internal/ubuntu noble-proposed/main armhf g++-arm-linux-gnueabihf armhf 4:13.2.0-7ubuntu2 [964 B] Get:184 http://ftpmaster.internal/ubuntu noble/main armhf dpkg-dev all 1.22.6ubuntu6 [1074 kB] Get:185 http://ftpmaster.internal/ubuntu noble/main armhf libdpkg-perl all 1.22.6ubuntu6 [268 kB] Get:186 http://ftpmaster.internal/ubuntu noble-proposed/main armhf patch armhf 2.7.6-7build3 [110 kB] Get:187 http://ftpmaster.internal/ubuntu noble-proposed/main armhf make armhf 4.3-4.1build2 [162 kB] Get:188 http://ftpmaster.internal/ubuntu noble/main armhf lto-disabled-list all 47 [12.4 kB] Get:189 http://ftpmaster.internal/ubuntu noble/main armhf libfakeroot armhf 1.33-1 [28.7 kB] Get:190 http://ftpmaster.internal/ubuntu noble/main armhf fakeroot armhf 1.33-1 [68.6 kB] Get:191 http://ftpmaster.internal/ubuntu noble-proposed/main armhf liblockfile-bin armhf 1.17-1build3 [10.5 kB] Get:192 http://ftpmaster.internal/ubuntu noble-proposed/main armhf liblockfile1 armhf 1.17-1build3 [6208 B] Get:193 http://ftpmaster.internal/ubuntu noble-proposed/main armhf lockfile-progs armhf 0.1.19build2 [8062 B] Preconfiguring packages ... 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Unpacking systemd (255.4-1ubuntu7) over (253.5-1ubuntu6) ... dpkg: warning: unable to delete old directory '/lib/systemd/system-preset': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system-generators': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/user@0.service.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/user@.service.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/user-.slice.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/timers.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/systemd-localed.service.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/sysinit.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/sockets.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/rescue.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/rc-local.service.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/multi-user.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/initrd.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/initrd-root-fs.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/initrd-root-device.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/graphical.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/system/getty.target.wants': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/network': Directory not empty dpkg: warning: unable to delete old directory '/lib/systemd/journald.conf.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/modprobe.d': Directory not empty Preparing to unpack .../libsystemd0_255.4-1ubuntu7_armhf.deb ... 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Installing new version of config file /etc/security/namespace.init ... dpkg: libnettle8:armhf: dependency problems, but removing anyway as you requested: libhogweed6:armhf depends on libnettle8. libgnutls30:armhf depends on libnettle8 (>= 3.7~). (Reading database ... 14943 files and directories currently installed.) Removing libnettle8:armhf (3.9.1-2) ... dpkg: libapt-pkg6.0:armhf: dependency problems, but removing anyway as you requested: apt-utils depends on libapt-pkg6.0 (>= 2.7.3). apt depends on libapt-pkg6.0 (>= 2.7.3). Removing libapt-pkg6.0:armhf (2.7.3) ... dpkg: libgnutls30:armhf: dependency problems, but removing anyway as you requested: apt depends on libgnutls30 (>= 3.7.5). Removing libgnutls30:armhf (3.8.1-4ubuntu1) ... Selecting previously unselected package libapt-pkg6.0t64:armhf. (Reading database ... 14877 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0t64_2.7.14build2_armhf.deb ... Unpacking libapt-pkg6.0t64:armhf (2.7.14build2) ... 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Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3 to /lib/arm-linux-gnueabihf/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0 to /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:armhf (1.3.4+ds-1.1build1) ... Preparing to unpack .../5-linux-libc-dev_6.8.0-22.22_armhf.deb ... Unpacking linux-libc-dev:armhf (6.8.0-22.22) over (6.5.0-9.9) ... Selecting previously unselected package gcc-14-base:armhf. Preparing to unpack .../6-gcc-14-base_14-20240330-1ubuntu2_armhf.deb ... Unpacking gcc-14-base:armhf (14-20240330-1ubuntu2) ... Setting up gcc-14-base:armhf (14-20240330-1ubuntu2) ... (Reading database ... 14977 files and directories currently installed.) Preparing to unpack .../libgcc-s1_14-20240330-1ubuntu2_armhf.deb ... Unpacking libgcc-s1:armhf (14-20240330-1ubuntu2) over (13.2.0-4ubuntu3) ... Setting up libgcc-s1:armhf (14-20240330-1ubuntu2) ... 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Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-4build1) ... Preparing to unpack .../pinentry-curses_1.2.1-3ubuntu5_armhf.deb ... Unpacking pinentry-curses (1.2.1-3ubuntu5) over (1.2.1-1ubuntu1) ... Preparing to unpack .../init-system-helpers_1.66ubuntu1_all.deb ... Unpacking init-system-helpers (1.66ubuntu1) over (1.65.2ubuntu1) ... Setting up init-system-helpers (1.66ubuntu1) ... 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(Reading database ... 14968 files and directories currently installed.) Preparing to unpack .../logsave_1.47.0-2.4~exp1ubuntu4_armhf.deb ... Unpacking logsave (1.47.0-2.4~exp1ubuntu4) over (1.47.0-2ubuntu1) ... dpkg: libext2fs2:armhf: dependency problems, but removing anyway as you requested: e2fsprogs depends on libext2fs2 (= 1.47.0-2ubuntu1). (Reading database ... 14968 files and directories currently installed.) Removing libext2fs2:armhf (1.47.0-2ubuntu1) ... Selecting previously unselected package libext2fs2t64:armhf. (Reading database ... 14961 files and directories currently installed.) Preparing to unpack .../libext2fs2t64_1.47.0-2.4~exp1ubuntu4_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libe2p.so.2 to /lib/arm-linux-gnueabihf/libe2p.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libe2p.so.2.3 to /lib/arm-linux-gnueabihf/libe2p.so.2.3.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libext2fs.so.2 to /lib/arm-linux-gnueabihf/libext2fs.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libext2fs.so.2.4 to /lib/arm-linux-gnueabihf/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' Unpacking libext2fs2t64:armhf (1.47.0-2.4~exp1ubuntu4) ... Setting up libcom-err2:armhf (1.47.0-2.4~exp1ubuntu4) ... Setting up libext2fs2t64:armhf (1.47.0-2.4~exp1ubuntu4) ... (Reading database ... 14977 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.47.0-2.4~exp1ubuntu4_armhf.deb ... Unpacking e2fsprogs (1.47.0-2.4~exp1ubuntu4) over (1.47.0-2ubuntu1) ... dpkg: warning: unable to delete old directory '/lib/udev/rules.d': Directory not empty dpkg: warning: unable to delete old directory '/lib/udev': Directory not empty Preparing to unpack .../optipng_0.7.8+ds-1build2_armhf.deb ... Unpacking optipng (0.7.8+ds-1build2) over (0.7.7-2build1) ... (Reading database ... 14975 files and directories currently installed.) Removing libpng16-16:armhf (1.6.40-1) ... Selecting previously unselected package libpng16-16t64:armhf. (Reading database ... 14965 files and directories currently installed.) Preparing to unpack .../libpng16-16t64_1.6.43-5build1_armhf.deb ... Unpacking libpng16-16t64:armhf (1.6.43-5build1) ... Setting up libapparmor1:armhf (4.0.0-beta3-0ubuntu3) ... Setting up libargon2-1:armhf (0~20190702+dfsg-4build1) ... Setting up libdevmapper1.02.1:armhf (2:1.02.185-3ubuntu3) ... Setting up libjson-c5:armhf (0.17-1build1) ... Setting up libcryptsetup12:armhf (2:2.7.0-1ubuntu4) ... Setting up libfdisk1:armhf (2.39.3-9ubuntu5) ... Setting up libkmod2:armhf (31+20240202-2ubuntu6) ... Setting up libsystemd-shared:armhf (255.4-1ubuntu7) ... Setting up systemd-dev (255.4-1ubuntu7) ... Setting up mount (2.39.3-9ubuntu5) ... Setting up systemd (255.4-1ubuntu7) ... Installing new version of config file /etc/systemd/journald.conf ... Installing new version of config file /etc/systemd/logind.conf ... Installing new version of config file /etc/systemd/networkd.conf ... Installing new version of config file /etc/systemd/pstore.conf ... Installing new version of config file /etc/systemd/sleep.conf ... Installing new version of config file /etc/systemd/system.conf ... Installing new version of config file /etc/systemd/user.conf ... Initializing machine ID from random generator. Setting up systemd-sysv (255.4-1ubuntu7) ... (Reading database ... 14976 files and directories currently installed.) 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Setting up libgdbm-compat4t64:armhf (1.23-5.1build1) ... Setting up psmisc (23.7-1build1) ... Setting up libtirpc-common (1.3.4+ds-1.1build1) ... Setting up libsqlite3-0:armhf (3.45.1-1ubuntu2) ... Setting up binutils-common:armhf (2.42-4ubuntu2) ... Setting up linux-libc-dev:armhf (6.8.0-22.22) ... Setting up libctf-nobfd0:armhf (2.42-4ubuntu2) ... Setting up krb5-locales (1.20.1-6ubuntu2) ... Setting up libgomp1:armhf (14-20240330-1ubuntu2) ... Setting up bzip2 (1.0.8-5.1) ... Setting up libsframe1:armhf (2.42-4ubuntu2) ... Setting up libfakeroot:armhf (1.33-1) ... Setting up libjansson4:armhf (2.14-2build2) ... Setting up libkrb5support0:armhf (1.20.1-6ubuntu2) ... Setting up tzdata (2024a-2ubuntu1) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Apr 10 21:55:01 UTC 2024. Universal Time is now: Wed Apr 10 21:55:01 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up fakeroot (1.33-1) ... Setting up rpcsvc-proto (1.4.2-0ubuntu7) ... Setting up gcc-13-base:armhf (13.2.0-23ubuntu3) ... Setting up make (4.3-4.1build2) ... Setting up libmpfr6:armhf (4.2.1-1build1) ... Setting up bash-completion (1:2.11-8) ... Setting up xz-utils (5.6.1+really5.4.5-1) ... Setting up perl-modules-5.38 (5.38.2-3.2build2) ... Setting up libproc2-0:armhf (2:4.0.4-4ubuntu3) ... Setting up libpng16-16t64:armhf (1.6.43-5build1) ... Setting up libmpc3:armhf (1.3.1-1build1) ... Setting up libatomic1:armhf (14-20240330-1ubuntu2) ... Setting up patch (2.7.6-7build3) ... Setting up libss2:armhf (1.47.0-2.4~exp1ubuntu4) ... Setting up libncursesw6:armhf (6.4+20240113-1ubuntu2) ... Setting up libk5crypto3:armhf (1.20.1-6ubuntu2) ... Setting up logsave (1.47.0-2.4~exp1ubuntu4) ... Setting up libdb5.3t64:armhf (5.3.28+dfsg2-6build1) ... Setting up libubsan1:armhf (14-20240330-1ubuntu2) ... Setting up advancecomp (2.5-1build1) ... Setting up sensible-utils (0.0.22) ... Setting up uuid-runtime (2.39.3-9ubuntu5) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of restart. Setting up libcrypt-dev:armhf (1:4.4.36-4build1) ... Setting up libasan8:armhf (14-20240330-1ubuntu2) ... Setting up procps (2:4.0.4-4ubuntu3) ... Installing new version of config file /etc/sysctl.conf ... Setting up mawk (1.3.4.20240123-1build1) ... Setting up libkrb5-3:armhf (1.20.1-6ubuntu2) ... Setting up liblockfile1:armhf (1.17-1build3) ... Setting up libperl5.38t64:armhf (5.38.2-3.2build2) ... Setting up libbinutils:armhf (2.42-4ubuntu2) ... Setting up libisl23:armhf (0.26-3build1) ... Setting up libc-dev-bin (2.39-0ubuntu8) ... Setting up openssl (3.0.13-0ubuntu3) ... Setting up libgpg-error-l10n (1.47-3build2) ... Setting up readline-common (8.2-4build1) ... Setting up libcc1-0:armhf (14-20240330-1ubuntu2) ... Setting up liblocale-gettext-perl (1.07-6ubuntu5) ... Setting up libctf0:armhf (2.42-4ubuntu2) ... Setting up pinentry-curses (1.2.1-3ubuntu5) ... Setting up apt-utils (2.7.14build2) ... Setting up cpp-13-arm-linux-gnueabihf (13.2.0-23ubuntu3) ... Setting up debconf-i18n (1.5.86) ... Setting up e2fsprogs (1.47.0-2.4~exp1ubuntu4) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... rehash: warning: skipping ca-certificates.crt,it does not contain exactly one certificate or CRL 14 added, 5 removed; done. Setting up perl (5.38.2-3.2build2) ... Setting up optipng (0.7.8+ds-1build2) ... Setting up lockfile-progs (0.1.19build2) ... Setting up libgssapi-krb5-2:armhf (1.20.1-6ubuntu2) ... Setting up libdpkg-perl (1.22.6ubuntu6) ... Setting up libreadline8t64:armhf (8.2-4build1) ... Setting up libgcc-13-dev:armhf (13.2.0-23ubuntu3) ... Setting up gpgconf (2.4.4-2ubuntu17) ... Setting up libc6-dev:armhf (2.39-0ubuntu8) ... Setting up binutils-arm-linux-gnueabihf (2.42-4ubuntu2) ... Setting up gpg (2.4.4-2ubuntu17) ... Setting up cpp-arm-linux-gnueabihf (4:13.2.0-7ubuntu2) ... Setting up libstdc++-13-dev:armhf (13.2.0-23ubuntu3) ... Setting up gpg-agent (2.4.4-2ubuntu17) ... Setting up cpp-13 (13.2.0-23ubuntu3) ... Setting up libtirpc3t64:armhf (1.3.4+ds-1.1build1) ... Setting up binutils (2.42-4ubuntu2) ... Setting up gcc-13-arm-linux-gnueabihf (13.2.0-23ubuntu3) ... Setting up dpkg-dev (1.22.6ubuntu6) ... Setting up libtirpc-dev:armhf (1.3.4+ds-1.1build1) ... Setting up gcc-13 (13.2.0-23ubuntu3) ... Setting up cpp (4:13.2.0-7ubuntu2) ... Setting up libnsl2:armhf (1.3.0-3build3) ... Setting up gcc-arm-linux-gnueabihf (4:13.2.0-7ubuntu2) ... Setting up g++-13-arm-linux-gnueabihf (13.2.0-23ubuntu3) ... Setting up g++-arm-linux-gnueabihf (4:13.2.0-7ubuntu2) ... Setting up g++-13 (13.2.0-23ubuntu3) ... Setting up libnss-nisplus:armhf (1.3-5build1) ... Setting up gcc (4:13.2.0-7ubuntu2) ... Setting up g++ (4:13.2.0-7ubuntu2) ... Setting up libnsl-dev:armhf (1.3.0-3build3) ... Processing triggers for libc-bin (2.39-0ubuntu8) ... Processing triggers for debianutils (5.17build1) ... (Reading database ... 15019 files and directories currently installed.) Purging configuration files for libssl3:armhf (3.0.10-1ubuntu2) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-27972628 armhf noble-proposed -c chroot:build-PACKAGEBUILD-27972628 --arch=armhf --dist=noble-proposed --nolog ball_1.5.0+git20180813.37fc53c-11build5.dsc Initiating build PACKAGEBUILD-27972628 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 5.4.0-176-generic #196-Ubuntu SMP Fri Mar 22 16:46:20 UTC 2024 armv7l sbuild (Debian sbuild) 0.79.0 (05 February 2020) on bos02-arm64-025.buildd +=================================================================================+ | ball 1.5.0+git20180813.37fc53c-11build5 (armhf) Wed, 10 Apr 2024 21:55:15 +0000 | +=================================================================================+ Package: ball Version: 1.5.0+git20180813.37fc53c-11build5 Source Version: 1.5.0+git20180813.37fc53c-11build5 Distribution: noble-proposed Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-27972628/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/ball-2D5fXV/resolver-oxXJ6c' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- ball_1.5.0+git20180813.37fc53c-11build5.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/ball-2D5fXV/ball-1.5.0+git20180813.37fc53c' with '<>' I: NOTICE: Log filtering will replace 'build/ball-2D5fXV' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-python, qtbase5-dev, libqt5opengl5-dev, python3-sip-dev, flex, bison, cmake, qtwebengine5-dev, qttools5-dev, libeigen3-dev, python3-dev, libboost-dev, libboost-iostreams-dev, libboost-thread-dev, libglew-dev, libx11-dev, tidy, chrpath, libtirpc-dev, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), dh-python, qtbase5-dev, libqt5opengl5-dev, python3-sip-dev, flex, bison, cmake, qtwebengine5-dev, qttools5-dev, libeigen3-dev, python3-dev, libboost-dev, libboost-iostreams-dev, libboost-thread-dev, libglew-dev, libx11-dev, tidy, chrpath, libtirpc-dev, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [510 B] Get:5 copy:/<>/apt_archive ./ Packages [565 B] Fetched 2032 B in 0s (61.0 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: apt-utils bash-completion ca-certificates debconf-i18n krb5-locales libgpg-error-l10n libgpm2 libip4tc2 liblocale-gettext-perl libnsl-dev libnsl2 libnss-nis libnss-nisplus libtext-charwidth-perl libtext-iconv-perl libtext-wrapi18n-perl libunistring2 openssl perl-modules-5.36 psmisc uuid-runtime Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bison chrpath cmake cmake-data debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism dwz file flex fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono gettext gettext-base groff-base icu-devtools intltool-debian iso-codes libarchive-zip-perl libarchive13t64 libasound2-data libasound2t64 libavahi-client3 libavahi-common-data libavahi-common3 libboost-atomic1.83-dev libboost-atomic1.83.0 libboost-chrono1.83-dev libboost-chrono1.83.0t64 libboost-date-time1.83-dev libboost-date-time1.83.0 libboost-dev libboost-iostreams-dev libboost-iostreams1.83-dev libboost-iostreams1.83.0 libboost-regex1.83-dev libboost-regex1.83.0 libboost-serialization1.83-dev libboost-serialization1.83.0 libboost-system1.83-dev libboost-system1.83.0 libboost-thread-dev libboost-thread1.83-dev libboost-thread1.83.0 libboost1.83-dev libbrotli1 libbsd0 libcap2-bin libclang1-15t64 libcups2t64 libcurl4t64 libdbus-1-3 libdebhelper-perl libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libdw1t64 libedit2 libegl-dev libegl-mesa0 libegl1 libeigen3-dev libelf1t64 libevdev2 libevent-2.1-7t64 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgbm1 libgl-dev libgl1 libgl1-mesa-dri libglapi-mesa libgles-dev libgles1 libgles2 libglew-dev libglew2.2 libglib2.0-0t64 libglu1-mesa libglu1-mesa-dev libglvnd0 libglx-dev libglx-mesa0 libglx0 libgraphite2-3 libgstreamer-plugins-base1.0-0 libgstreamer1.0-0 libgudev-1.0-0 libharfbuzz-subset0 libharfbuzz0b libhyphen0 libice6 libicu-dev libicu74 libinput-bin libinput10 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-sphinxdoc libjs-underscore libjsoncpp25 liblcms2-2 libldap2 libllvm15t64 libllvm17t64 libmagic-mgc libmagic1t64 libmd4c0 libminizip1t64 libmtdev1t64 libnghttp2-14 libnspr4 libnss3 libopengl-dev libopengl0 libopenjp2-7 libopus0 liborc-0.4-0t64 libpcre2-16-0 libpipeline1 libpkgconf3 libpsl5t64 libpthread-stubs0-dev libpython3-dev libpython3-stdlib libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libqt5concurrent5t64 libqt5core5t64 libqt5dbus5t64 libqt5designer5 libqt5designercomponents5 libqt5gui5t64 libqt5help5 libqt5network5t64 libqt5opengl5-dev libqt5opengl5t64 libqt5positioning5 libqt5positioning5-plugins libqt5positioningquick5 libqt5printsupport5t64 libqt5qml5 libqt5qmlmodels5 libqt5qmlworkerscript5 libqt5quick5 libqt5quickparticles5 libqt5quickshapes5 libqt5quicktest5 libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5-sqlite libqt5sql5t64 libqt5test5t64 libqt5webchannel5 libqt5webchannel5-dev libqt5webengine-data libqt5webengine5 libqt5webenginecore5 libqt5webenginewidgets5 libqt5webkit5 libqt5widgets5t64 libqt5xml5t64 libre2-10 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsharpyuv0 libsm6 libsnappy1v5 libssh-4 libsub-override-perl libtidy5deb1 libtool libuchardet0 libunwind8 libuv1t64 libvpx9 libvulkan-dev libvulkan1 libwacom-common libwacom9 libwayland-client0 libwayland-server0 libwebp7 libwebpdemux2 libwebpmux3 libwoff1 libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxcomposite1 libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes3 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxrandr2 libxrender1 libxshmfence1 libxslt1.1 libxtst6 libxxf86vm1 m4 man-db media-types netbase pkg-config pkgconf pkgconf-bin po-debconf python3 python3-dev python3-minimal python3-pkg-resources python3-setuptools python3-sip python3-sip-dev python3.12 python3.12-dev python3.12-minimal qdoc-qt5 qhelpgenerator-qt5 qt5-assistant qt5-qmake qt5-qmake-bin qt5-qmltooling-plugins qtattributionsscanner-qt5 qtbase5-dev qtbase5-dev-tools qtchooser qtdeclarative5-dev qtdeclarative5-dev-tools qtpositioning5-dev qttools5-dev qttools5-dev-tools qtwebengine5-dev shared-mime-info sip-dev tidy x11-common x11proto-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc bison-doc cmake-doc cmake-format elpa-cmake-mode ninja-build dh-make flit python3-build python3-installer python3-wheel flex-doc gettext-doc libasprintf-dev libgettextpo-dev groff isoquery lrzip alsa-utils libasound2-plugins libboost-doc libboost1.83-doc libboost-container1.83-dev libboost-context1.83-dev libboost-contract1.83-dev libboost-coroutine1.83-dev libboost-exception1.83-dev libboost-fiber1.83-dev libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev libboost-graph1.83-dev libboost-json1.83-dev libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev libboost-numpy1.83-dev libboost-program-options1.83-dev libboost-python1.83-dev libboost-random1.83-dev libboost-stacktrace1.83-dev libboost-test1.83-dev libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev cups-common libeigen3-doc glew-utils low-memory-monitor libvisual-0.4-plugins gstreamer1.0-tools icu-doc liblcms2-utils opus-tools libthai0 qgnomeplatform-qt5 qt5-image-formats-plugins lm-sensors libtool-doc gfortran | fortran95-compiler gcj-jdk libwacom-bin libx11-doc libxcb-doc libxext-doc m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk python3-venv python-setuptools-doc python-sip-doc python3.12-venv python3.12-doc binfmt-support qt5-doc default-libmysqlclient-dev firebird-dev libpq-dev libsqlite3-dev unixodbc-dev Recommended packages: libfl-dev curl | wget | lynx alsa-ucm-conf alsa-topology-conf libpam-cap dbus libarchive-cpio-perl libgl1-amber-dri libglib2.0-data xdg-user-dirs gstreamer1.0-plugins-base javascript-common libldap-common publicsuffix qttranslations5-l10n libqt5svg5 qt5-gtk-platformtheme qtwayland5 geoclue-2.0 libcups2 libssl3 libsasl2-modules libltdl-dev mesa-vulkan-drivers | vulkan-icd libmail-sendmail-perl qtwebengine5-doc The following NEW packages will be installed: autoconf automake autopoint autotools-dev bison chrpath cmake cmake-data debhelper debugedit dh-autoreconf dh-python dh-strip-nondeterminism dwz file flex fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono gettext gettext-base groff-base icu-devtools intltool-debian iso-codes libarchive-zip-perl libarchive13t64 libasound2-data libasound2t64 libavahi-client3 libavahi-common-data libavahi-common3 libboost-atomic1.83-dev libboost-atomic1.83.0 libboost-chrono1.83-dev libboost-chrono1.83.0t64 libboost-date-time1.83-dev libboost-date-time1.83.0 libboost-dev libboost-iostreams-dev libboost-iostreams1.83-dev libboost-iostreams1.83.0 libboost-regex1.83-dev libboost-regex1.83.0 libboost-serialization1.83-dev libboost-serialization1.83.0 libboost-system1.83-dev libboost-system1.83.0 libboost-thread-dev libboost-thread1.83-dev libboost-thread1.83.0 libboost1.83-dev libbrotli1 libbsd0 libcap2-bin libclang1-15t64 libcups2t64 libcurl4t64 libdbus-1-3 libdebhelper-perl libdouble-conversion3 libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libdw1t64 libedit2 libegl-dev libegl-mesa0 libegl1 libeigen3-dev libelf1t64 libevdev2 libevent-2.1-7t64 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgbm1 libgl-dev libgl1 libgl1-mesa-dri libglapi-mesa libgles-dev libgles1 libgles2 libglew-dev libglew2.2 libglib2.0-0t64 libglu1-mesa libglu1-mesa-dev libglvnd0 libglx-dev libglx-mesa0 libglx0 libgraphite2-3 libgstreamer-plugins-base1.0-0 libgstreamer1.0-0 libgudev-1.0-0 libharfbuzz-subset0 libharfbuzz0b libhyphen0 libice6 libicu-dev libicu74 libinput-bin libinput10 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-sphinxdoc libjs-underscore libjsoncpp25 liblcms2-2 libldap2 libllvm15t64 libllvm17t64 libmagic-mgc libmagic1t64 libmd4c0 libminizip1t64 libmtdev1t64 libnghttp2-14 libnspr4 libnss3 libopengl-dev libopengl0 libopenjp2-7 libopus0 liborc-0.4-0t64 libpcre2-16-0 libpipeline1 libpkgconf3 libpsl5t64 libpthread-stubs0-dev libpython3-dev libpython3-stdlib libpython3.12-dev libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libqt5concurrent5t64 libqt5core5t64 libqt5dbus5t64 libqt5designer5 libqt5designercomponents5 libqt5gui5t64 libqt5help5 libqt5network5t64 libqt5opengl5-dev libqt5opengl5t64 libqt5positioning5 libqt5positioning5-plugins libqt5positioningquick5 libqt5printsupport5t64 libqt5qml5 libqt5qmlmodels5 libqt5qmlworkerscript5 libqt5quick5 libqt5quickparticles5 libqt5quickshapes5 libqt5quicktest5 libqt5quickwidgets5 libqt5sensors5 libqt5serialport5 libqt5sql5-sqlite libqt5sql5t64 libqt5test5t64 libqt5webchannel5 libqt5webchannel5-dev libqt5webengine-data libqt5webengine5 libqt5webenginecore5 libqt5webenginewidgets5 libqt5webkit5 libqt5widgets5t64 libqt5xml5t64 libre2-10 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsharpyuv0 libsm6 libsnappy1v5 libssh-4 libsub-override-perl libtidy5deb1 libtool libuchardet0 libunwind8 libuv1t64 libvpx9 libvulkan-dev libvulkan1 libwacom-common libwacom9 libwayland-client0 libwayland-server0 libwebp7 libwebpdemux2 libwebpmux3 libwoff1 libx11-6 libx11-data libx11-dev libx11-xcb1 libxau-dev libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-present0 libxcb-randr0 libxcb-render-util0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-util1 libxcb-xfixes0 libxcb-xinerama0 libxcb-xinput0 libxcb-xkb1 libxcb1 libxcb1-dev libxcomposite1 libxdamage1 libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes3 libxkbcommon-x11-0 libxkbcommon0 libxml2 libxrandr2 libxrender1 libxshmfence1 libxslt1.1 libxtst6 libxxf86vm1 m4 man-db media-types netbase pkg-config pkgconf pkgconf-bin po-debconf python3 python3-dev python3-minimal python3-pkg-resources python3-setuptools python3-sip python3-sip-dev python3.12 python3.12-dev python3.12-minimal qdoc-qt5 qhelpgenerator-qt5 qt5-assistant qt5-qmake qt5-qmake-bin qt5-qmltooling-plugins qtattributionsscanner-qt5 qtbase5-dev qtbase5-dev-tools qtchooser qtdeclarative5-dev qtdeclarative5-dev-tools qtpositioning5-dev qttools5-dev qttools5-dev-tools qtwebengine5-dev sbuild-build-depends-main-dummy shared-mime-info sip-dev tidy x11-common x11proto-dev xkb-data xorg-sgml-doctools xtrans-dev zlib1g-dev 0 upgraded, 294 newly installed, 0 to remove and 0 not upgraded. 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noble/main armhf libdw1t64 armhf 0.190-1.1build4 [235 kB] Get:41 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libunwind8 armhf 1.6.2-3build1 [47.6 kB] Get:42 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libcap2-bin armhf 1:2.66-5ubuntu2 [32.3 kB] Get:43 http://ftpmaster.internal/ubuntu noble/main armhf libgstreamer1.0-0 armhf 1.24.1-1build1 [1144 kB] Get:44 http://ftpmaster.internal/ubuntu noble/main armhf liborc-0.4-0t64 armhf 1:0.4.38-1build1 [183 kB] Get:45 http://ftpmaster.internal/ubuntu noble/main armhf iso-codes all 4.16.0-1 [3492 kB] Get:46 http://ftpmaster.internal/ubuntu noble/main armhf libgstreamer-plugins-base1.0-0 armhf 1.24.1-1build1 [809 kB] Get:47 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libhyphen0 armhf 2.8.8-7build3 [24.8 kB] Get:48 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libicu74 armhf 74.2-1ubuntu3 [10.5 MB] Get:49 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libjpeg-turbo8 armhf 2.1.5-2ubuntu2 [125 kB] Get:50 http://ftpmaster.internal/ubuntu noble/main armhf libjpeg8 armhf 8c-2ubuntu11 [2148 B] Get:51 http://ftpmaster.internal/ubuntu noble/main armhf libxml2 armhf 2.9.14+dfsg-1.3ubuntu3 [595 kB] Get:52 http://ftpmaster.internal/ubuntu noble/main armhf shared-mime-info armhf 2.4-4 [471 kB] Get:53 http://ftpmaster.internal/ubuntu noble/universe armhf libdouble-conversion3 armhf 3.3.0-1 [38.3 kB] Get:54 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libpcre2-16-0 armhf 10.42-4ubuntu2 [180 kB] Get:55 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5core5t64 armhf 5.15.13+dfsg-1ubuntu1 [1752 kB] Get:56 http://ftpmaster.internal/ubuntu noble/main armhf libbrotli1 armhf 1.1.0-2build2 [319 kB] Get:57 http://ftpmaster.internal/ubuntu noble/main armhf libfreetype6 armhf 2.13.2+dfsg-1build3 [331 kB] Get:58 http://ftpmaster.internal/ubuntu noble/main armhf fonts-dejavu-mono all 2.37-8 [502 kB] Get:59 http://ftpmaster.internal/ubuntu noble/main armhf fonts-dejavu-core all 2.37-8 [835 kB] Get:60 http://ftpmaster.internal/ubuntu noble/main armhf fontconfig-config armhf 2.15.0-1.1ubuntu2 [37.4 kB] Get:61 http://ftpmaster.internal/ubuntu noble/main armhf libfontconfig1 armhf 2.15.0-1.1ubuntu2 [113 kB] Get:62 http://ftpmaster.internal/ubuntu noble/main armhf fontconfig armhf 2.15.0-1.1ubuntu2 [189 kB] Get:63 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgraphite2-3 armhf 1.3.14-2build1 [64.6 kB] Get:64 http://ftpmaster.internal/ubuntu noble/main armhf libharfbuzz0b armhf 8.3.0-2build2 [446 kB] Get:65 http://ftpmaster.internal/ubuntu noble-proposed/main armhf x11-common all 1:7.7+23ubuntu3 [21.7 kB] Get:66 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libice6 armhf 2:1.0.10-1build3 [35.4 kB] Get:67 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libevdev2 armhf 1.13.1+dfsg-1build1 [29.8 kB] Get:68 http://ftpmaster.internal/ubuntu noble/main armhf libmtdev1t64 armhf 1.1.6-1.1build1 [13.1 kB] Get:69 http://ftpmaster.internal/ubuntu noble/main armhf libgudev-1.0-0 armhf 1:238-5ubuntu1 [13.8 kB] Get:70 http://ftpmaster.internal/ubuntu noble/main armhf libwacom-common all 2.10.0-2 [63.4 kB] Get:71 http://ftpmaster.internal/ubuntu noble/main armhf libwacom9 armhf 2.10.0-2 [20.9 kB] Get:72 http://ftpmaster.internal/ubuntu noble/main armhf libinput-bin armhf 1.25.0-1ubuntu2 [24.5 kB] Get:73 http://ftpmaster.internal/ubuntu noble/main armhf libinput10 armhf 1.25.0-1ubuntu2 [117 kB] Get:74 http://ftpmaster.internal/ubuntu noble/universe armhf libmd4c0 armhf 0.4.8-1 [37.9 kB] Get:75 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libdbus-1-3 armhf 1.14.10-4ubuntu4 [190 kB] Get:76 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5dbus5t64 armhf 5.15.13+dfsg-1ubuntu1 [196 kB] Get:77 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5network5t64 armhf 5.15.13+dfsg-1ubuntu1 [649 kB] Get:78 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libsm6 armhf 2:1.2.3-1build3 [14.1 kB] Get:79 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxcb-icccm4 armhf 0.4.1-1.1build3 [9450 B] Get:80 http://ftpmaster.internal/ubuntu noble/main armhf libxcb-shm0 armhf 1.15-1 [5852 B] Get:81 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxcb-util1 armhf 0.4.0-1build3 [9224 B] Get:82 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxcb-image0 armhf 0.4.0-2build1 [9680 B] Get:83 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxcb-keysyms1 armhf 0.4.0-1build4 [7260 B] Get:84 http://ftpmaster.internal/ubuntu noble/main armhf libxcb-render0 armhf 1.15-1 [15.2 kB] Get:85 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxcb-render-util0 armhf 0.3.9-1build4 [8648 B] Get:86 http://ftpmaster.internal/ubuntu noble/main armhf libxcb-shape0 armhf 1.15-1 [6024 B] Get:87 http://ftpmaster.internal/ubuntu noble/main armhf libxcb-xinerama0 armhf 1.15-1 [5200 B] Get:88 http://ftpmaster.internal/ubuntu noble/main armhf libxcb-xinput0 armhf 1.15-1 [29.6 kB] Get:89 http://ftpmaster.internal/ubuntu noble/main armhf libxcb-xkb1 armhf 1.15-1 [28.8 kB] Get:90 http://ftpmaster.internal/ubuntu noble/main armhf xkb-data all 2.41-2 [395 kB] Get:91 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxkbcommon0 armhf 1.6.0-1build1 [108 kB] Get:92 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxkbcommon-x11-0 armhf 1.6.0-1build1 [13.8 kB] Get:93 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxrender1 armhf 1:0.9.10-1.1build1 [16.0 kB] Get:94 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5gui5t64 armhf 5.15.13+dfsg-1ubuntu1 [2935 kB] Get:95 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5positioning5 armhf 5.15.13+dfsg-1 [196 kB] Get:96 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libavahi-common-data armhf 0.8-13ubuntu6 [29.7 kB] Get:97 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libavahi-common3 armhf 0.8-13ubuntu6 [20.2 kB] Get:98 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libavahi-client3 armhf 0.8-13ubuntu6 [24.2 kB] Get:99 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libcups2t64 armhf 2.4.7-1.2ubuntu5 [239 kB] Get:100 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5widgets5t64 armhf 5.15.13+dfsg-1ubuntu1 [2247 kB] Get:101 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5printsupport5t64 armhf 5.15.13+dfsg-1ubuntu1 [190 kB] Get:102 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5qml5 armhf 5.15.13+dfsg-1 [1319 kB] Get:103 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5qmlmodels5 armhf 5.15.13+dfsg-1 [173 kB] Get:104 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5quick5 armhf 5.15.13+dfsg-1 [1497 kB] Get:105 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5sensors5 armhf 5.15.13-1 [105 kB] Get:106 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5webchannel5 armhf 5.15.13-1 [53.2 kB] Get:107 http://ftpmaster.internal/ubuntu noble/main armhf libsharpyuv0 armhf 1.3.2-0.4build3 [13.6 kB] Get:108 http://ftpmaster.internal/ubuntu noble/main armhf libwebp7 armhf 1.3.2-0.4build3 [183 kB] Get:109 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libwoff1 armhf 1.0.2-2build1 [38.8 kB] Get:110 http://ftpmaster.internal/ubuntu noble/main armhf libxslt1.1 armhf 1.1.39-0exp1build1 [150 kB] Get:111 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5webkit5 armhf 5.212.0~alpha4-36 [10.4 MB] Get:112 http://ftpmaster.internal/ubuntu noble/main armhf python3-pkg-resources all 68.1.2-2ubuntu1 [168 kB] Get:113 http://ftpmaster.internal/ubuntu noble/main armhf libmagic-mgc armhf 1:5.45-3build1 [307 kB] Get:114 http://ftpmaster.internal/ubuntu noble/main armhf libmagic1t64 armhf 1:5.45-3build1 [81.4 kB] Get:115 http://ftpmaster.internal/ubuntu noble/main armhf file armhf 1:5.45-3build1 [21.1 kB] Get:116 http://ftpmaster.internal/ubuntu noble-proposed/main armhf gettext-base armhf 0.21-14ubuntu2 [38.1 kB] Get:117 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libuchardet0 armhf 0.0.8-1build1 [73.9 kB] Get:118 http://ftpmaster.internal/ubuntu noble/main armhf groff-base armhf 1.23.0-3build2 [946 kB] Get:119 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libedit2 armhf 3.1-20230828-1build1 [78.7 kB] Get:120 http://ftpmaster.internal/ubuntu noble/main armhf libnghttp2-14 armhf 1.59.0-1build2 [68.1 kB] Get:121 http://ftpmaster.internal/ubuntu noble/main armhf libpipeline1 armhf 1.5.7-2 [26.2 kB] Get:122 http://ftpmaster.internal/ubuntu noble/main armhf libpsl5t64 armhf 0.21.2-1.1build1 [55.8 kB] Get:123 http://ftpmaster.internal/ubuntu noble/main armhf libuv1t64 armhf 1.48.0-1.1build1 [83.0 kB] Get:124 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxext6 armhf 2:1.3.4-1build2 [25.3 kB] Get:125 http://ftpmaster.internal/ubuntu noble-proposed/main armhf man-db armhf 2.12.0-4build2 [1202 kB] Get:126 http://ftpmaster.internal/ubuntu noble/main armhf autoconf all 2.71-3 [339 kB] Get:127 http://ftpmaster.internal/ubuntu noble/main armhf autotools-dev all 20220109.1 [44.9 kB] Get:128 http://ftpmaster.internal/ubuntu noble/main armhf automake all 1:1.16.5-1.3ubuntu1 [558 kB] Get:129 http://ftpmaster.internal/ubuntu noble-proposed/main armhf autopoint all 0.21-14ubuntu2 [422 kB] Get:130 http://ftpmaster.internal/ubuntu noble-proposed/main armhf bison armhf 2:3.8.2+dfsg-1build2 [730 kB] Get:131 http://ftpmaster.internal/ubuntu noble/universe armhf chrpath armhf 0.16-2build1 [12.2 kB] Get:132 http://ftpmaster.internal/ubuntu noble/main armhf libarchive13t64 armhf 3.7.2-2 [330 kB] Get:133 http://ftpmaster.internal/ubuntu noble/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-5ubuntu3 [19.2 kB] Get:134 http://ftpmaster.internal/ubuntu noble/main armhf libsasl2-2 armhf 2.1.28+dfsg1-5ubuntu3 [49.7 kB] Get:135 http://ftpmaster.internal/ubuntu noble/main armhf libldap2 armhf 2.6.7+dfsg-1~exp1ubuntu8 [172 kB] Get:136 http://ftpmaster.internal/ubuntu noble/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2build7 [51.3 kB] Get:137 http://ftpmaster.internal/ubuntu noble/main armhf libssh-4 armhf 0.10.6-2build2 [169 kB] Get:138 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libcurl4t64 armhf 8.5.0-2ubuntu10 [296 kB] Get:139 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libjsoncpp25 armhf 1.9.5-6build1 [75.3 kB] Get:140 http://ftpmaster.internal/ubuntu noble-proposed/main armhf librhash0 armhf 1.4.3-3build1 [143 kB] Get:141 http://ftpmaster.internal/ubuntu noble/main armhf cmake-data all 3.28.3-1build6 [2155 kB] Get:142 http://ftpmaster.internal/ubuntu noble/main armhf cmake armhf 3.28.3-1build6 [6049 kB] Get:143 http://ftpmaster.internal/ubuntu noble/main armhf libdebhelper-perl all 13.14.1ubuntu5 [89.8 kB] Get:144 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libtool all 2.4.7-7build1 [166 kB] Get:145 http://ftpmaster.internal/ubuntu noble/main armhf dh-autoreconf all 20 [16.1 kB] Get:146 http://ftpmaster.internal/ubuntu noble/main armhf libarchive-zip-perl all 1.68-1 [90.2 kB] Get:147 http://ftpmaster.internal/ubuntu noble/main armhf libsub-override-perl all 0.10-1 [10.0 kB] Get:148 http://ftpmaster.internal/ubuntu noble/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [18.1 kB] Get:149 http://ftpmaster.internal/ubuntu noble/main armhf dh-strip-nondeterminism all 1.13.1-1 [5362 B] Get:150 http://ftpmaster.internal/ubuntu noble/main armhf debugedit armhf 1:5.0-5build2 [42.3 kB] Get:151 http://ftpmaster.internal/ubuntu noble/main armhf dwz armhf 0.15-1build6 [116 kB] Get:152 http://ftpmaster.internal/ubuntu noble-proposed/main armhf gettext armhf 0.21-14ubuntu2 [800 kB] Get:153 http://ftpmaster.internal/ubuntu noble/main armhf intltool-debian all 0.35.0+20060710.6 [23.2 kB] Get:154 http://ftpmaster.internal/ubuntu noble/main armhf po-debconf all 1.0.21+nmu1 [233 kB] Get:155 http://ftpmaster.internal/ubuntu noble/main armhf debhelper all 13.14.1ubuntu5 [869 kB] Get:156 http://ftpmaster.internal/ubuntu noble/main armhf python3-setuptools all 68.1.2-2ubuntu1 [396 kB] Get:157 http://ftpmaster.internal/ubuntu noble/universe armhf dh-python all 6.20240401 [110 kB] Get:158 http://ftpmaster.internal/ubuntu noble-proposed/main armhf icu-devtools armhf 74.2-1ubuntu3 [201 kB] Get:159 http://ftpmaster.internal/ubuntu noble/main armhf libasound2-data all 1.2.11-1build2 [21.0 kB] Get:160 http://ftpmaster.internal/ubuntu noble/main armhf libasound2t64 armhf 1.2.11-1build2 [346 kB] Get:161 http://ftpmaster.internal/ubuntu noble/main armhf libboost1.83-dev armhf 1.83.0-2.1ubuntu3 [10.7 MB] Get:162 http://ftpmaster.internal/ubuntu noble/main armhf libboost-atomic1.83.0 armhf 1.83.0-2.1ubuntu3 [239 kB] Get:163 http://ftpmaster.internal/ubuntu noble/main armhf libboost-atomic1.83-dev armhf 1.83.0-2.1ubuntu3 [234 kB] Get:164 http://ftpmaster.internal/ubuntu noble/main armhf libboost-chrono1.83.0t64 armhf 1.83.0-2.1ubuntu3 [244 kB] Get:165 http://ftpmaster.internal/ubuntu noble/main armhf libboost-chrono1.83-dev armhf 1.83.0-2.1ubuntu3 [245 kB] Get:166 http://ftpmaster.internal/ubuntu noble/main armhf libboost-date-time1.83.0 armhf 1.83.0-2.1ubuntu3 [236 kB] Get:167 http://ftpmaster.internal/ubuntu noble/main armhf libboost-serialization1.83.0 armhf 1.83.0-2.1ubuntu3 [332 kB] Get:168 http://ftpmaster.internal/ubuntu noble/main armhf libboost-serialization1.83-dev armhf 1.83.0-2.1ubuntu3 [404 kB] Get:169 http://ftpmaster.internal/ubuntu noble/main armhf libboost-date-time1.83-dev armhf 1.83.0-2.1ubuntu3 [239 kB] Get:170 http://ftpmaster.internal/ubuntu noble/main armhf libboost-dev armhf 1.83.0.1ubuntu2 [4310 B] Get:171 http://ftpmaster.internal/ubuntu noble/main armhf libboost-regex1.83.0 armhf 1.83.0-2.1ubuntu3 [320 kB] Get:172 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libicu-dev armhf 74.2-1ubuntu3 [11.6 MB] Get:173 http://ftpmaster.internal/ubuntu noble/main armhf libboost-regex1.83-dev armhf 1.83.0-2.1ubuntu3 [349 kB] Get:174 http://ftpmaster.internal/ubuntu noble/main armhf libboost-iostreams1.83.0 armhf 1.83.0-2.1ubuntu3 [257 kB] Get:175 http://ftpmaster.internal/ubuntu noble/universe armhf libboost-iostreams1.83-dev armhf 1.83.0-2.1ubuntu3 [265 kB] Get:176 http://ftpmaster.internal/ubuntu noble/universe armhf libboost-iostreams-dev armhf 1.83.0.1ubuntu2 [4046 B] Get:177 http://ftpmaster.internal/ubuntu noble/main armhf libboost-system1.83.0 armhf 1.83.0-2.1ubuntu3 [236 kB] Get:178 http://ftpmaster.internal/ubuntu noble/main armhf libboost-system1.83-dev armhf 1.83.0-2.1ubuntu3 [231 kB] Get:179 http://ftpmaster.internal/ubuntu noble/main armhf libboost-thread1.83.0 armhf 1.83.0-2.1ubuntu3 [270 kB] Get:180 http://ftpmaster.internal/ubuntu noble/main armhf libboost-thread1.83-dev armhf 1.83.0-2.1ubuntu3 [281 kB] Get:181 http://ftpmaster.internal/ubuntu noble/main armhf libboost-thread-dev armhf 1.83.0.1ubuntu2 [4088 B] Get:182 http://ftpmaster.internal/ubuntu noble/universe armhf libllvm15t64 armhf 1:15.0.7-14build3 [24.1 MB] Get:183 http://ftpmaster.internal/ubuntu noble/universe armhf libclang1-15t64 armhf 1:15.0.7-14build3 [6396 kB] Get:184 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libdrm-amdgpu1 armhf 2.4.120-2build1 [18.6 kB] Get:185 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libdrm-nouveau2 armhf 2.4.120-2build1 [15.2 kB] Get:186 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libdrm-radeon1 armhf 2.4.120-2build1 [18.2 kB] Get:187 http://ftpmaster.internal/ubuntu noble/main armhf libxcb-glx0 armhf 1.15-1 [22.6 kB] Get:188 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxfixes3 armhf 1:6.0.0-2build1 [9038 B] Get:189 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxxf86vm1 armhf 1:1.1.4-1build4 [8068 B] Get:190 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libvulkan1 armhf 1.3.275.0-1build1 [123 kB] Get:191 http://ftpmaster.internal/ubuntu noble/main armhf libllvm17t64 armhf 1:17.0.6-9build3 [25.3 MB] Get:192 http://ftpmaster.internal/ubuntu noble/main armhf libsensors-config all 1:3.6.0-9build1 [5546 B] Get:193 http://ftpmaster.internal/ubuntu noble/main armhf libsensors5 armhf 1:3.6.0-9build1 [24.6 kB] Get:194 http://ftpmaster.internal/ubuntu noble/main armhf libgl1-mesa-dri armhf 24.0.3-1ubuntu4 [7201 kB] Get:195 http://ftpmaster.internal/ubuntu noble/main armhf libglx-mesa0 armhf 24.0.3-1ubuntu4 [132 kB] Get:196 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libglx0 armhf 1.7.0-1build1 [39.3 kB] Get:197 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgl1 armhf 1.7.0-1build1 [105 kB] Get:198 http://ftpmaster.internal/ubuntu noble/main armhf xorg-sgml-doctools all 1:1.11-1.1 [10.9 kB] Get:199 http://ftpmaster.internal/ubuntu noble/main armhf x11proto-dev all 2023.2-1 [602 kB] Get:200 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxau-dev armhf 1:1.0.9-1build6 [8964 B] Get:201 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxdmcp-dev armhf 1:1.1.3-0ubuntu6 [24.9 kB] Get:202 http://ftpmaster.internal/ubuntu noble/main armhf xtrans-dev all 1.4.0-1 [68.9 kB] Get:203 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libpthread-stubs0-dev armhf 0.4-1build3 [4744 B] Get:204 http://ftpmaster.internal/ubuntu noble/main armhf libxcb1-dev armhf 1.15-1 [84.6 kB] Get:205 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libx11-dev armhf 2:1.8.7-1build1 [671 kB] Get:206 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libglx-dev armhf 1.7.0-1build1 [14.2 kB] Get:207 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgl-dev armhf 1.7.0-1build1 [102 kB] Get:208 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libegl-dev armhf 1.7.0-1build1 [18.2 kB] Get:209 http://ftpmaster.internal/ubuntu noble/main armhf libevent-2.1-7t64 armhf 2.1.12-stable-9ubuntu2 [127 kB] Get:210 http://ftpmaster.internal/ubuntu noble/main armhf libexpat1-dev armhf 2.6.1-2build1 [122 kB] Get:211 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgles1 armhf 1.7.0-1build1 [11.6 kB] Get:212 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libgles-dev armhf 1.7.0-1build1 [50.5 kB] Get:213 http://ftpmaster.internal/ubuntu noble/universe armhf libglew2.2 armhf 2.2.0-4 [214 kB] Get:214 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libopengl0 armhf 1.7.0-1build1 [36.2 kB] Get:215 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libglu1-mesa armhf 9.0.2-1.1build1 [153 kB] Get:216 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libopengl-dev armhf 1.7.0-1build1 [3448 B] Get:217 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libglu1-mesa-dev armhf 9.0.2-1.1build1 [197 kB] Get:218 http://ftpmaster.internal/ubuntu noble/universe armhf libglew-dev armhf 2.2.0-4 [327 kB] Get:219 http://ftpmaster.internal/ubuntu noble/main armhf libharfbuzz-subset0 armhf 8.3.0-2build2 [446 kB] Get:220 http://ftpmaster.internal/ubuntu noble/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [328 kB] Get:221 http://ftpmaster.internal/ubuntu noble/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [118 kB] Get:222 http://ftpmaster.internal/ubuntu noble/main armhf libjs-sphinxdoc all 7.2.6-6 [149 kB] Get:223 http://ftpmaster.internal/ubuntu noble-proposed/main armhf liblcms2-2 armhf 2.14-2build1 [132 kB] Get:224 http://ftpmaster.internal/ubuntu noble/universe armhf libminizip1t64 armhf 1:1.3.dfsg-3.1ubuntu2 [19.9 kB] Get:225 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libnspr4 armhf 2:4.35-1.1build1 [93.0 kB] Get:226 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libnss3 armhf 2:3.98-1build1 [1288 kB] Get:227 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libopus0 armhf 1.4-1build1 [187 kB] Get:228 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libpkgconf3 armhf 1.8.1-2build1 [26.3 kB] Get:229 http://ftpmaster.internal/ubuntu noble/main armhf libpython3.12t64 armhf 3.12.2-5ubuntu3 [2078 kB] Get:230 http://ftpmaster.internal/ubuntu noble/main armhf zlib1g-dev armhf 1:1.3.dfsg-3.1ubuntu2 [880 kB] Get:231 http://ftpmaster.internal/ubuntu noble/main armhf libpython3.12-dev armhf 3.12.2-5ubuntu3 [4317 kB] Get:232 http://ftpmaster.internal/ubuntu noble/main armhf libpython3-dev armhf 3.12.2-0ubuntu2 [10.1 kB] Get:233 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5concurrent5t64 armhf 5.15.13+dfsg-1ubuntu1 [34.2 kB] Get:234 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5xml5t64 armhf 5.15.13+dfsg-1ubuntu1 [108 kB] Get:235 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5designer5 armhf 5.15.13-1 [2718 kB] Get:236 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5designercomponents5 armhf 5.15.13-1 [700 kB] Get:237 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5sql5t64 armhf 5.15.13+dfsg-1ubuntu1 [107 kB] Get:238 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5help5 armhf 5.15.13-1 [142 kB] Get:239 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5opengl5t64 armhf 5.15.13+dfsg-1ubuntu1 [126 kB] Get:240 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5test5t64 armhf 5.15.13+dfsg-1ubuntu1 [134 kB] Get:241 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libvulkan-dev armhf 1.3.275.0-1build1 [1239 kB] Get:242 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxext-dev armhf 2:1.3.4-1build2 [79.4 kB] Get:243 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf qt5-qmake-bin armhf 5.15.13+dfsg-1ubuntu1 [1033 kB] Get:244 http://ftpmaster.internal/ubuntu noble/universe armhf qtchooser armhf 66-2build1 [22.3 kB] Get:245 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf qt5-qmake armhf 5.15.13+dfsg-1ubuntu1 [209 kB] Get:246 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf qtbase5-dev-tools armhf 5.15.13+dfsg-1ubuntu1 [726 kB] Get:247 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf qtbase5-dev armhf 5.15.13+dfsg-1ubuntu1 [1062 kB] Get:248 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5opengl5-dev armhf 5.15.13+dfsg-1ubuntu1 [42.3 kB] Get:249 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5serialport5 armhf 5.15.13-1 [31.4 kB] Get:250 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5positioning5-plugins armhf 5.15.13+dfsg-1 [80.3 kB] Get:251 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5positioningquick5 armhf 5.15.13+dfsg-1 [39.1 kB] Get:252 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf 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qtdeclarative5-dev armhf 5.15.13+dfsg-1 [463 kB] Get:261 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5webchannel5-dev armhf 5.15.13-1 [9164 B] Get:262 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5webengine-data all 5.15.16+dfsg-3 [7622 kB] Get:263 http://ftpmaster.internal/ubuntu noble/main armhf libopenjp2-7 armhf 2.5.0-2build3 [160 kB] Get:264 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libre2-10 armhf 20230301-3build1 [174 kB] Get:265 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libsnappy1v5 armhf 1.1.10-1build1 [26.5 kB] Get:266 http://ftpmaster.internal/ubuntu noble/main armhf libvpx9 armhf 1.14.0-1ubuntu2 [1629 kB] Get:267 http://ftpmaster.internal/ubuntu noble/main armhf libwebpdemux2 armhf 1.3.2-0.4build3 [11.8 kB] Get:268 http://ftpmaster.internal/ubuntu noble/main armhf libwebpmux3 armhf 1.3.2-0.4build3 [22.4 kB] Get:269 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxcomposite1 armhf 1:0.4.5-1build3 [5750 B] Get:270 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxdamage1 armhf 1:1.1.6-1build1 [5462 B] Get:271 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxrandr2 armhf 2:1.5.2-2build1 [15.9 kB] Get:272 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libxtst6 armhf 2:1.2.3-1.1build1 [10.7 kB] Get:273 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5webenginecore5 armhf 5.15.16+dfsg-3 [40.5 MB] Get:274 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5webengine5 armhf 5.15.16+dfsg-3 [154 kB] Get:275 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf libqt5webenginewidgets5 armhf 5.15.16+dfsg-3 [108 kB] Get:276 http://ftpmaster.internal/ubuntu noble-proposed/main armhf libtidy5deb1 armhf 2:5.6.0-11ubuntu2 [193 kB] Get:277 http://ftpmaster.internal/ubuntu noble-proposed/main armhf pkgconf-bin armhf 1.8.1-2build1 [20.7 kB] Get:278 http://ftpmaster.internal/ubuntu noble-proposed/main armhf pkgconf armhf 1.8.1-2build1 [16.8 kB] Get:279 http://ftpmaster.internal/ubuntu noble-proposed/main armhf pkg-config armhf 1.8.1-2build1 [7264 B] Get:280 http://ftpmaster.internal/ubuntu noble/main armhf python3.12-dev armhf 3.12.2-5ubuntu3 [498 kB] Get:281 http://ftpmaster.internal/ubuntu noble/main armhf python3-dev armhf 3.12.2-0ubuntu2 [26.7 kB] Get:282 http://ftpmaster.internal/ubuntu noble/universe armhf python3-sip armhf 4.19.25+dfsg-5build2 [111 kB] Get:283 http://ftpmaster.internal/ubuntu noble/universe armhf sip-dev armhf 4.19.25+dfsg-5build2 [172 kB] Get:284 http://ftpmaster.internal/ubuntu noble/universe armhf python3-sip-dev armhf 4.19.25+dfsg-5build2 [22.8 kB] Get:285 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf qdoc-qt5 armhf 5.15.13-1 [571 kB] Get:286 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf qhelpgenerator-qt5 armhf 5.15.13-1 [53.6 kB] Get:287 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf qt5-assistant armhf 5.15.13-1 [345 kB] Get:288 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf qtattributionsscanner-qt5 armhf 5.15.13-1 [31.9 kB] Get:289 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf qtpositioning5-dev armhf 5.15.13+dfsg-1 [19.2 kB] Get:290 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf qttools5-dev-tools armhf 5.15.13-1 [1023 kB] Get:291 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf qttools5-dev armhf 5.15.13-1 [195 kB] Get:292 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf qtwebengine5-dev armhf 5.15.16+dfsg-3 [63.8 kB] Get:293 http://ftpmaster.internal/ubuntu noble-proposed/universe armhf tidy armhf 2:5.6.0-11ubuntu2 [28.0 kB] Get:294 http://ftpmaster.internal/ubuntu noble/universe armhf libeigen3-dev all 3.4.0-4 [1056 kB] Preconfiguring packages ... Fetched 240 MB in 34s (7098 kB/s) Selecting previously unselected package libpython3.12-minimal:armhf. (Reading database ... 15019 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.2-5ubuntu3_armhf.deb ... Unpacking libpython3.12-minimal:armhf (3.12.2-5ubuntu3) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.6.1-2build1_armhf.deb ... Unpacking libexpat1:armhf (2.6.1-2build1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.2-5ubuntu3_armhf.deb ... Unpacking python3.12-minimal (3.12.2-5ubuntu3) ... Setting up libpython3.12-minimal:armhf (3.12.2-5ubuntu3) ... Setting up libexpat1:armhf (2.6.1-2build1) ... Setting up python3.12-minimal (3.12.2-5ubuntu3) ... Selecting previously unselected package python3-minimal. (Reading database ... 15337 files and directories currently installed.) 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Selecting previously unselected package tidy. Preparing to unpack .../282-tidy_2%3a5.6.0-11ubuntu2_armhf.deb ... Unpacking tidy (2:5.6.0-11ubuntu2) ... Selecting previously unselected package libeigen3-dev. Preparing to unpack .../283-libeigen3-dev_3.4.0-4_all.deb ... Unpacking libeigen3-dev (3.4.0-4) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../284-sbuild-build-depends-main-dummy_0.invalid.0_armhf.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:armhf (1.5.7-2) ... Setting up libgraphite2-3:armhf (1.3.14-2build1) ... Setting up liblcms2-2:armhf (2.14-2build1) ... Setting up libsharpyuv0:armhf (1.3.2-0.4build3) ... Setting up libwayland-server0:armhf (1.22.0-2.1build1) ... Setting up libxau6:armhf (1:1.0.9-1build6) ... Setting up libdouble-conversion3:armhf (3.3.0-1) ... Setting up libboost1.83-dev:armhf (1.83.0-2.1ubuntu3) ... 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Setting up automake (1:1.16.5-1.3ubuntu1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up x11proto-dev (2023.2-1) ... Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libice6:armhf (2:1.0.10-1build3) ... Setting up libxdmcp6:armhf (1:1.1.3-0ubuntu6) ... Setting up flex (2.6.4-8.2build1) ... Setting up libxcb1:armhf (1.15-1) ... Setting up gettext (0.21-14ubuntu2) ... Setting up libxcb-xfixes0:armhf (1.15-1) ... Setting up libxau-dev:armhf (1:1.0.9-1build6) ... Setting up libboost-chrono1.83-dev:armhf (1.83.0-2.1ubuntu3) ... Setting up libpython3.12-stdlib:armhf (3.12.2-5ubuntu3) ... Setting up qt5-qmake:armhf (5.15.13+dfsg-1ubuntu1) ... Setting up libxcb-xinput0:armhf (1.15-1) ... Setting up libwoff1:armhf (1.0.2-2build1) ... Setting up libcurl4t64:armhf (8.5.0-2ubuntu10) ... Setting up libtool (2.4.7-7build1) ... Setting up libxcb-render0:armhf (1.15-1) ... 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Setting up python3-setuptools (68.1.2-2ubuntu1) ... Setting up libglx0:armhf (1.7.0-1build1) ... Setting up libboost-iostreams1.83-dev:armhf (1.83.0-2.1ubuntu3) ... Setting up qdoc-qt5 (5.15.13-1) ... Setting up libxtst6:armhf (2:1.2.3-1.1build1) ... Setting up libqt5concurrent5t64:armhf (5.15.13+dfsg-1ubuntu1) ... Setting up libqt5positioning5:armhf (5.15.13+dfsg-1) ... Setting up libqt5network5t64:armhf (5.15.13+dfsg-1ubuntu1) ... Setting up libqt5xml5t64:armhf (5.15.13+dfsg-1ubuntu1) ... Setting up debhelper (13.14.1ubuntu5) ... Setting up libqt5serialport5:armhf (5.15.13-1) ... Setting up libboost-iostreams-dev:armhf (1.83.0.1ubuntu2) ... Setting up libqt5test5t64:armhf (5.15.13+dfsg-1ubuntu1) ... Setting up qtbase5-dev-tools (5.15.13+dfsg-1ubuntu1) ... Setting up libqt5gui5t64:armhf (5.15.13+dfsg-1ubuntu1) ... Setting up libgl1:armhf (1.7.0-1build1) ... Setting up libqt5qml5:armhf (5.15.13+dfsg-1) ... Setting up python3-dev (3.12.2-0ubuntu2) ... 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Setting up libqt5quickshapes5:armhf (5.15.13+dfsg-1) ... Setting up libqt5quicktest5:armhf (5.15.13+dfsg-1) ... Setting up libqt5positioningquick5:armhf (5.15.13+dfsg-1) ... Setting up libqt5designer5:armhf (5.15.13-1) ... Setting up qtdeclarative5-dev-tools (5.15.13+dfsg-1) ... Setting up qhelpgenerator-qt5 (5.15.13-1) ... Setting up libqt5webkit5:armhf (5.212.0~alpha4-36) ... Setting up libqt5designercomponents5:armhf (5.15.13-1) ... Setting up qt5-qmltooling-plugins:armhf (5.15.13+dfsg-1) ... Setting up libqt5quickwidgets5:armhf (5.15.13+dfsg-1) ... Setting up libglew-dev:armhf (2.2.0-4) ... Setting up qtbase5-dev:armhf (5.15.13+dfsg-1ubuntu1) ... Setting up qt5-assistant (5.15.13-1) ... Setting up qttools5-dev-tools (5.15.13-1) ... Setting up libqt5webenginecore5:armhf (5.15.16+dfsg-3) ... Setting up libqt5quickparticles5:armhf (5.15.13+dfsg-1) ... Setting up libqt5opengl5-dev:armhf (5.15.13+dfsg-1ubuntu1) ... Setting up libqt5webengine5:armhf (5.15.16+dfsg-3) ... Setting up qttools5-dev:armhf (5.15.13-1) ... Setting up libqt5webenginewidgets5:armhf (5.15.16+dfsg-3) ... Setting up qtdeclarative5-dev:armhf (5.15.13+dfsg-1) ... Setting up qtpositioning5-dev:armhf (5.15.13+dfsg-1) ... Setting up libqt5webchannel5-dev:armhf (5.15.13-1) ... Setting up qtwebengine5-dev:armhf (5.15.16+dfsg-3) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for systemd (255.4-1ubuntu7) ... Processing triggers for libc-bin (2.39-0ubuntu8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.4.0-176-generic #196-Ubuntu SMP Fri Mar 22 16:46:20 UTC 2024 arm64 (armv7l) Toolchain package versions: binutils_2.42-4ubuntu2 dpkg-dev_1.22.6ubuntu6 g++-13_13.2.0-23ubuntu3 gcc-13_13.2.0-23ubuntu3 libc6-dev_2.39-0ubuntu8 libstdc++-13-dev_13.2.0-23ubuntu3 libstdc++6_14-20240330-1ubuntu2 linux-libc-dev_6.8.0-22.22 Package versions: adduser_3.137ubuntu1 advancecomp_2.5-1build1 apt_2.7.14build2 apt-utils_2.7.14build2 autoconf_2.71-3 automake_1:1.16.5-1.3ubuntu1 autopoint_0.21-14ubuntu2 autotools-dev_20220109.1 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libxcb-keysyms1_0.4.0-1build4 libxcb-present0_1.15-1 libxcb-randr0_1.15-1 libxcb-render-util0_0.3.9-1build4 libxcb-render0_1.15-1 libxcb-shape0_1.15-1 libxcb-shm0_1.15-1 libxcb-sync1_1.15-1 libxcb-util1_0.4.0-1build3 libxcb-xfixes0_1.15-1 libxcb-xinerama0_1.15-1 libxcb-xinput0_1.15-1 libxcb-xkb1_1.15-1 libxcb1_1.15-1 libxcb1-dev_1.15-1 libxcomposite1_1:0.4.5-1build3 libxdamage1_1:1.1.6-1build1 libxdmcp-dev_1:1.1.3-0ubuntu6 libxdmcp6_1:1.1.3-0ubuntu6 libxext-dev_2:1.3.4-1build2 libxext6_2:1.3.4-1build2 libxfixes3_1:6.0.0-2build1 libxkbcommon-x11-0_1.6.0-1build1 libxkbcommon0_1.6.0-1build1 libxml2_2.9.14+dfsg-1.3ubuntu3 libxrandr2_2:1.5.2-2build1 libxrender1_1:0.9.10-1.1build1 libxshmfence1_1.3-1build5 libxslt1.1_1.1.39-0exp1build1 libxtst6_2:1.2.3-1.1build1 libxxf86vm1_1:1.1.4-1build4 libxxhash0_0.8.2-2build1 libzstd1_1.5.5+dfsg2-2build1 linux-libc-dev_6.8.0-22.22 lockfile-progs_0.1.19build2 login_1:4.13+dfsg1-4ubuntu3 logsave_1.47.0-2.4~exp1ubuntu4 lto-disabled-list_47 m4_1.4.19-4build1 make_4.3-4.1build2 man-db_2.12.0-4build2 mawk_1.3.4.20240123-1build1 media-types_10.1.0 mount_2.39.3-9ubuntu5 ncurses-base_6.4+20240113-1ubuntu2 ncurses-bin_6.4+20240113-1ubuntu2 netbase_6.4 openssl_3.0.13-0ubuntu3 optipng_0.7.8+ds-1build2 passwd_1:4.13+dfsg1-4ubuntu3 patch_2.7.6-7build3 perl_5.38.2-3.2build2 perl-base_5.38.2-3.2build2 perl-modules-5.36_5.36.0-9ubuntu1 perl-modules-5.38_5.38.2-3.2build2 pinentry-curses_1.2.1-3ubuntu5 pkg-config_1.8.1-2build1 pkgbinarymangler_154 pkgconf_1.8.1-2build1 pkgconf-bin_1.8.1-2build1 po-debconf_1.0.21+nmu1 policyrcd-script-zg2_0.1-3.1 procps_2:4.0.4-4ubuntu3 psmisc_23.7-1build1 python3_3.12.2-0ubuntu2 python3-dev_3.12.2-0ubuntu2 python3-minimal_3.12.2-0ubuntu2 python3-pkg-resources_68.1.2-2ubuntu1 python3-setuptools_68.1.2-2ubuntu1 python3-sip_4.19.25+dfsg-5build2 python3-sip-dev_4.19.25+dfsg-5build2 python3.12_3.12.2-5ubuntu3 python3.12-dev_3.12.2-5ubuntu3 python3.12-minimal_3.12.2-5ubuntu3 qdoc-qt5_5.15.13-1 qhelpgenerator-qt5_5.15.13-1 qt5-assistant_5.15.13-1 qt5-qmake_5.15.13+dfsg-1ubuntu1 qt5-qmake-bin_5.15.13+dfsg-1ubuntu1 qt5-qmltooling-plugins_5.15.13+dfsg-1 qtattributionsscanner-qt5_5.15.13-1 qtbase5-dev_5.15.13+dfsg-1ubuntu1 qtbase5-dev-tools_5.15.13+dfsg-1ubuntu1 qtchooser_66-2build1 qtdeclarative5-dev_5.15.13+dfsg-1 qtdeclarative5-dev-tools_5.15.13+dfsg-1 qtpositioning5-dev_5.15.13+dfsg-1 qttools5-dev_5.15.13-1 qttools5-dev-tools_5.15.13-1 qtwebengine5-dev_5.15.16+dfsg-3 readline-common_8.2-4build1 rpcsvc-proto_1.4.2-0ubuntu7 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2build1 sensible-utils_0.0.22 shared-mime-info_2.4-4 sip-dev_4.19.25+dfsg-5build2 systemd_255.4-1ubuntu7 systemd-dev_255.4-1ubuntu7 systemd-sysv_255.4-1ubuntu7 sysvinit-utils_3.08-6ubuntu3 tar_1.35+dfsg-3build1 tidy_2:5.6.0-11ubuntu2 tzdata_2024a-2ubuntu1 ubuntu-keyring_2023.11.28.1 util-linux_2.39.3-9ubuntu5 uuid-runtime_2.39.3-9ubuntu5 x11-common_1:7.7+23ubuntu3 x11proto-dev_2023.2-1 xkb-data_2.41-2 xorg-sgml-doctools_1:1.11-1.1 xtrans-dev_1.4.0-1 xz-utils_5.6.1+really5.4.5-1 zlib1g_1:1.3.dfsg-3.1ubuntu2 zlib1g-dev_1:1.3.dfsg-3.1ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: ball Binary: libball1.5-data, libball1.5, libball1.5-dev, libballview1.5, libballview1.5-dev, ballview, libball1.5-doc Architecture: any all Version: 1.5.0+git20180813.37fc53c-11build5 Maintainer: Ubuntu Developers Uploaders: Andreas Tille , Steffen Moeller Homepage: http://www.ball-project.org/ Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/ball Vcs-Git: https://salsa.debian.org/med-team/ball.git Build-Depends: debhelper-compat (= 13), dh-python, qtbase5-dev, libqt5opengl5-dev, python3-sip-dev, flex, bison, cmake, qtwebengine5-dev [amd64 arm64 armhf i386 mipsel mips64el], qttools5-dev, libeigen3-dev, python3-dev, libboost-dev, libboost-iostreams-dev, libboost-thread-dev, libglew-dev, libx11-dev, tidy, chrpath, libtirpc-dev Build-Depends-Indep: doxygen, graphviz, ghostscript, texlive-latex-base, texlive-latex-recommended, texlive-fonts-recommended, texlive-latex-extra Package-List: ballview deb science optional arch=any libball1.5 deb libs optional arch=any libball1.5-data deb science optional arch=all libball1.5-dev deb libdevel optional arch=any libball1.5-doc deb doc optional arch=all libballview1.5 deb libs optional arch=any libballview1.5-dev deb libdevel optional arch=any Checksums-Sha1: 696a5708b583fdd96051e4496c3a4d8e188f349d 21325220 ball_1.5.0+git20180813.37fc53c.orig.tar.xz f3b9c74f1be5d767ecbb8a3c3d74cd20a93e48c4 18384 ball_1.5.0+git20180813.37fc53c-11build5.debian.tar.xz Checksums-Sha256: 88e95068ced3bb8f50440dd22d3dd9aa56c6d7653a5a978ec163daafd1d90720 21325220 ball_1.5.0+git20180813.37fc53c.orig.tar.xz e33643b97ce557f806fa6d84baf102cb7fc84c808d4b1def57c157c63abbd997 18384 ball_1.5.0+git20180813.37fc53c-11build5.debian.tar.xz Files: 1a3777fbe23ce81cc89c2fa53de4af9c 21325220 ball_1.5.0+git20180813.37fc53c.orig.tar.xz 1b5e5f4abd76655c63f50d0e62675e72 18384 ball_1.5.0+git20180813.37fc53c-11build5.debian.tar.xz Original-Maintainer: Debian Med Packaging Team -----BEGIN PGP SIGNATURE----- iQJOBAEBCgA4FiEErEg/aN5yj0PyIC/KVo0w8yGyEz0FAmYIrJsaHHN0ZXZlLmxh bmdhc2VrQHVidW50dS5jb20ACgkQVo0w8yGyEz0g/xAAkX8KbCPvLdxi9Z7J+ehb yrogIUPi3Kcg9DMUN/9Qg3kjJb82NFY+XMIo2diFhrGqAduhmdWptaJOrR6b2ptX O2/p/2JZ7wu2fTBl41y1MaWNODOpR/w/r88RvqfrlR6tp/eo1qIuLHOqSIpsYW8V AwWB2SAd4G7ejRjGyj7m6A88zV7JSS8GjI8IrTiWcPvBH1WKr0UI4zBub9RaT/1S e3kdW+FsNOKQVqkzTGdx2bpCeRbLK0YPQ7jkE0Sr6hbOYhqz7SIDxisLQPPnNNOJ 1dNEVL7eN8EcG3HS7msm7EEBsAJyvH+Wu9VgVi6cD7OTMPnyAkjOzgDm2h/58FVi UIQqsT+K9WKun+92xKNjmDxf4Z0TN8ggfuEleXsrKcjv2BIBIf2gaNrsJc4tb3NG jR8DpjlOaAHw9a4JVqUjWO43AW00moji8f7xB+6eGdAs+Fjrz2o9w8WEAYhDeLi4 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applying 2to3.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-27972628 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-27972628 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-27972628 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -B -rfakeroot dpkg-buildpackage: info: source package ball dpkg-buildpackage: info: source version 1.5.0+git20180813.37fc53c-11build5 dpkg-buildpackage: info: source distribution noble dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --buildsystem=cmake --builddirectory=build # --with python3 debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' [ -d source ] && cd source ; \ if [ -f Makefile ] ; \ then \ make clean ; \ cd PYTHON/EXTENSIONS; \ make clean; \ rm -rf ../lib/Linux*; \ rm -rf ../doc/doxygen/latex/*; \ rm -f /<>/source/config.status 2>/dev/null; \ fi rm -f data/BALLView/translations/BALLView.de_DE.qm rm -f data/BALLView/translations/BALLView.zh_TW.qm rm -f doc/TUTORIAL/*.aux rm -rf build find . -name "*.o" | xargs -r rm find . -type l | xargs -r rm find doc/TUTORIAL/ -name "tutorial.*" | egrep -v ".(tex|bib)$" |xargs -r rm rm -f include/BALL/BALL.doc # find . -name "*.doc" -delete # Remove self-create UI header file rm -f include/BALL/VIEW/UIC/ui_assignBondOrderConfigurationDialog.h \ include/BALL/VIEW/UIC/ui_assignBondOrderResultsDialog.h \ include/BALL/VIEW/UIC/ui_atomOverview.h make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--buildsystem=cmake -O--builddirectory=build dh_clean -O--buildsystem=cmake -O--builddirectory=build rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libball1.5-data.substvars debian/libball1.5.substvars debian/libball1.5-dev.substvars debian/libballview1.5.substvars debian/libballview1.5-dev.substvars debian/ballview.substvars debian/libball1.5-doc.substvars debian/files rm -fr -- debian/libball1.5-data/ debian/tmp/ debian/libball1.5/ debian/libball1.5-dev/ debian/libballview1.5/ debian/libballview1.5-dev/ debian/ballview/ debian/libball1.5-doc/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch --buildsystem=cmake --builddirectory=build # --with python3 dh_update_autotools_config -a -O--buildsystem=cmake -O--builddirectory=build dh_autoreconf -a -O--buildsystem=cmake -O--builddirectory=build debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' mkdir -p build cd build && LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -ltirpc" CXXFLAGS="-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc" CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5" CPPFLAGS="-D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=3" \ cmake .. -DCMAKE_SOURCE_DIR=/<> -DCMAKE_INSTALL_PREFIX=./usr \ -DBALL_PATH=/usr -DBALL_DATA_PATH=/usr/share/BALL-1.5/data \ -DCMAKE_VERBOSE_MAKEFILE=ON CMake Deprecation Warning at CMakeLists.txt:8 (CMAKE_MINIMUM_REQUIRED): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at CMakeLists.txt:10 (CMAKE_POLICY): The OLD behavior for policy CMP0042 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. -- The C compiler identification is GNU 13.2.0 -- The CXX compiler identification is GNU 13.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Compiler checks for conversion: OFF -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of char -- Check size of char - done -- Check size of short -- Check size of short - done -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of size_t -- Check size of size_t - done -- Check size of void* -- Check size of void* - done -- Check size of unsigned short -- Check size of unsigned short - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of unsigned long -- Check size of unsigned long - done -- Check size of unsigned long long -- Check size of unsigned long long - done -- Check size of float -- Check size of float - done -- Check size of double -- Check size of double - done -- Check size of uint64_t -- Check size of uint64_t - done -- Check size of uint32_t -- Check size of uint32_t - done -- Check size of uint16_t -- Check size of uint16_t - done -- Looking for C++ include unistd.h -- Looking for C++ include unistd.h - found -- Looking for C++ include process.h -- Looking for C++ include process.h - not found -- Looking for C++ include time.h -- Looking for C++ include time.h - found -- Looking for C++ include dirent.h -- Looking for C++ include dirent.h - found -- Looking for C++ include direct.h -- Looking for C++ include direct.h - not found -- Looking for C++ include pwd.h -- Looking for C++ include pwd.h - found -- Looking for C++ include stdint.h -- Looking for C++ include stdint.h - found -- Looking for C++ include sys/time.h -- Looking for C++ include sys/time.h - found -- Looking for C++ include sys/stat.h -- Looking for C++ include sys/stat.h - found -- Looking for C++ include sys/times.h -- Looking for C++ include sys/times.h - found -- Looking for C++ include sys/types.h -- Looking for C++ include sys/types.h - found -- Looking for C++ include sys/param.h -- Looking for C++ include sys/param.h - found -- Looking for C++ include sys/sysinfo.h -- Looking for C++ include sys/sysinfo.h - found -- Performing Test BALL_HAS_MODE_T -- Performing Test BALL_HAS_MODE_T - Success -- Looking for C++ include ieeefp.h -- Looking for C++ include ieeefp.h - not found -- Looking for kill -- Looking for kill - found -- Looking for sysconf -- Looking for sysconf - found -- Performing Test BALL_ALLOW_LONG64_TYPE_OVERLOADS -- Performing Test BALL_ALLOW_LONG64_TYPE_OVERLOADS - Success -- Performing Test BALL_HAS_THREAD_LOCAL -- Performing Test BALL_HAS_THREAD_LOCAL - Success -- Performing Test BALL_HAS_NOEXCEPT -- Performing Test BALL_HAS_NOEXCEPT - Success -- Performing Test BALL_HAS_STD_STRING_CONST_ITERATOR_FUNCTIONS -- Performing Test BALL_HAS_STD_STRING_CONST_ITERATOR_FUNCTIONS - Success -- Performing Test BALL_HAS_STD_STRING_CONST_ITERATOR_INITLIST_INSERT -- Performing Test BALL_HAS_STD_STRING_CONST_ITERATOR_INITLIST_INSERT - Success -- Looking for vsnprintf -- Looking for vsnprintf - found -- [GCC only] STL debug mode: OFF -- Found BISON: /usr/bin/bison -- Found FLEX: /usr/bin/flex -- Checking for yylex_destroy support in flex -- Checking for yylex_destroy support in flex - Not found -- Looking for C++ include rpc/types.h -- Looking for C++ include rpc/types.h - found -- Performing Test XDR_HAS_RPC_XDR_H -- Performing Test XDR_HAS_RPC_XDR_H - Success -- Looking for xdr_int -- Looking for xdr_int - not found -- Looking for xdr_int in /usr/lib/arm-linux-gnueabihf/libnsl.so -- Looking for xdr_int in /usr/lib/arm-linux-gnueabihf/libnsl.so - not found CMake Warning at cmake/FindXDR.cmake:67 (MESSAGE): Could not locate xdr symbols in libc or libnsl. Persistence will be disabled! Call Stack (most recent call first): cmake/BALLConfigXDR.cmake:1 (FIND_PACKAGE) CMakeLists.txt:135 (INCLUDE) -- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.55") found components: chrono date_time iostreams regex serialization system thread -- Could NOT find LPSolve (missing: LPSOLVE_LIBRARIES LPSOLVE_INCLUDE_PATH LPSOLVE_LINKS) -- Looking for math.h -- Looking for math.h - found CMake Warning (dev) at /usr/share/cmake-3.28/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (LibSVM) does not match the name of the calling package (libSVM). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/FindlibSVM.cmake:165 (find_package_handle_standard_args) CMakeLists.txt:196 (FIND_PACKAGE) This warning is for project developers. Use -Wno-dev to suppress it. -- Could NOT find LibSVM (missing: LIBSVM_LIBRARY LIBSVM_INCLUDE_DIR LIBSVM_INCLUDE_DIRS LIBSVM_ROOT_DIR) -- [Warning] FindTBB.cmake: The use of TBB_ARCHITECTURE and TBB_COMPILER is deprecated and may not be supported in future versions. Please set (using tbbvars.[bat|csh|sh]). -- Looked for Threading Building Blocks in /opt/intel/tbb;/usr/local/include;/usr/include;/usr -- Intel Threading Building Blocks not found! -- Checking for module 'mpi-c' -- Package 'mpi-c', required by 'virtual:world', not found -- Could NOT find MPI_C (missing: MPI_C_LIB_NAMES MPI_C_HEADER_DIR MPI_C_WORKS) -- Checking for module 'mpi-cxx' -- Package 'mpi-cxx', required by 'virtual:world', not found -- Could NOT find MPI_CXX (missing: MPI_CXX_LIB_NAMES MPI_CXX_HEADER_DIR MPI_CXX_WORKS) -- Could NOT find MPI (missing: MPI_C_FOUND MPI_CXX_FOUND) -- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") CMake Warning (dev) at /usr/share/cmake-3.28/Modules/FindOpenGL.cmake:381 (message): Policy CMP0072 is not set: FindOpenGL prefers GLVND by default when available. Run "cmake --help-policy CMP0072" for policy details. Use the cmake_policy command to set the policy and suppress this warning. FindOpenGL found both a legacy GL library: OPENGL_gl_LIBRARY: /usr/lib/arm-linux-gnueabihf/libGL.so and GLVND libraries for OpenGL and GLX: OPENGL_opengl_LIBRARY: /usr/lib/arm-linux-gnueabihf/libOpenGL.so OPENGL_glx_LIBRARY: /usr/lib/arm-linux-gnueabihf/libGLX.so OpenGL_GL_PREFERENCE has not been set to "GLVND" or "LEGACY", so for compatibility with CMake 3.10 and below the legacy GL library will be used. Call Stack (most recent call first): CMakeLists.txt:355 (FIND_PACKAGE) This warning is for project developers. Use -Wno-dev to suppress it. -- Found OpenGL: /usr/lib/arm-linux-gnueabihf/libOpenGL.so -- Found GLEW: /usr/include (found version "2.2.0") -- Could not find RTfact header file (RTpie/IRayTracer.hpp)! Real time ray tracing will be disabled! CMake Warning (dev) at CMakeLists.txt:403 (FIND_PACKAGE): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.12.2", minimum required is "3") CMake Warning (dev) at CMakeLists.txt:405 (FIND_PACKAGE): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonLibs: /usr/lib/arm-linux-gnueabihf/libpython3.12.so (found suitable version "3.12.2", minimum required is "3") -- Found SIP version: 4.19.25 -- Could NOT find SIP (missing: SIP_LIBRARIES) (Required is at least version "4.8") -- Disabling python support. -- Setting CTDSchema version to its default value (v1.7) -- Setting CTDConverter version to its default value (v2.0) -- Could not find SpaceNavigator libraries. Disabling the SpaceNavigator plugin -- Could not find VRPN libraries. Disabling the VRPN plugin -- Could not find VRPN libraries. Disabling the VRPNHD plugin -- Python support has not been enabled. Disabling the Jupyter plugin. -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Could NOT find LATEX (missing: LATEX_COMPILER) -- Doxygen not found. Disabling all documentation targets! -- Doxygen or Latex missing. Disabling 'tutorial' target! CMake Warning (dev) at CMakeLists.txt:775 (INCLUDE): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at /usr/share/cmake-3.28/Modules/Dart.cmake:47 (message): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:775 (INCLUDE) This warning is for project developers. Use -Wno-dev to suppress it. -- -- ----------------------------------------------------------------- -- -- You have successfully configured BALL. -- -- For a full list of make targets execute: -- 'make targets' -- -- ----------------------------------------------------------------- -- -- Configuring done (20.3s) -- Generating done (8.6s) -- Build files have been written to: /<>/build make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/<>' ## Fix upstream issue of missing UI files ## ... ## Uhmmm, seems we need to do this for all UI files mentioned in ## source/VIEW/DIALOGS/sources.cmake ## but I really hope some cmake expert might be able to find a clue ## how to trigger cmake to do it as intended by upstream. ## Somehow the code ## ADD_BALL_UIFILES("VIEW/DIALOGS" "") ## needs to be called before the build code below can be started make -C build BALL VIEW BALLView build_tests install make[2]: Entering directory '/<>/build' /usr/bin/cmake -S/<> -B/<>/build --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 BALL make[3]: Entering directory '/<>/build' /usr/bin/cmake -S/<> -B/<>/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles 16 make -f CMakeFiles/Makefile2 CMakeFiles/BALL.dir/all make[4]: Entering directory '/<>/build' make -f CMakeFiles/BALL_autogen_timestamp_deps.dir/build.make CMakeFiles/BALL_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/BALL_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/build' make -f CMakeFiles/BALL_autogen_timestamp_deps.dir/build.make CMakeFiles/BALL_autogen_timestamp_deps.dir/build make[5]: Entering directory '/<>/build' [ 0%] [FLEX][CIFParserLexer] Building scanner with flex 2.6.4 cd /<> && /usr/bin/flex -PCIFParser -o/<>/build/source/FORMAT/CIFParserLexer.C source/FORMAT/CIFParserLexer.l [ 0%] [BISON][CIFParserParser] Building parser with bison 3.8.2 cd /<> && /usr/bin/bison --defines=/<>/build/source/FORMAT/CIFParserParser.h -pCIFParser -d -o /<>/build/source/FORMAT/CIFParserParser.C source/FORMAT/CIFParserParser.y source/FORMAT/CIFParserParser.y: warning: 5 shift/reduce conflicts [-Wconflicts-sr] source/FORMAT/CIFParserParser.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples [ 0%] [FLEX][GAMESSDatParserLexer] Building scanner with flex 2.6.4 cd /<> && /usr/bin/flex -PGAMESSDatParser -o/<>/build/source/FORMAT/GAMESSDatParserLexer.C source/FORMAT/GAMESSDatParserLexer.l [ 0%] [BISON][GAMESSDatParserParser] Building parser with bison 3.8.2 cd /<> && /usr/bin/bison --defines=/<>/build/source/FORMAT/GAMESSDatParserParser.h -pGAMESSDatParser -d -o /<>/build/source/FORMAT/GAMESSDatParserParser.C source/FORMAT/GAMESSDatParserParser.y source/FORMAT/GAMESSDatParserParser.y: warning: 3 shift/reduce conflicts [-Wconflicts-sr] source/FORMAT/GAMESSDatParserParser.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples [ 0%] [FLEX][expressionParserLexer] Building scanner with flex 2.6.4 cd /<> && /usr/bin/flex -PExpressionParser -o/<>/build/source/KERNEL/expressionParserLexer.C source/KERNEL/expressionParserLexer.l [ 0%] [BISON][expressionParserParser] Building parser with bison 3.8.2 cd /<> && /usr/bin/bison --defines=/<>/build/source/KERNEL/expressionParserParser.h -pExpressionParser -d -o /<>/build/source/KERNEL/expressionParserParser.C source/KERNEL/expressionParserParser.y [ 0%] [FLEX][parsedFunctionLexer] Building scanner with flex 2.6.4 cd /<> && /usr/bin/flex -PParsedFunction -o/<>/build/source/MATHS/parsedFunctionLexer.C source/MATHS/parsedFunctionLexer.l [ 0%] [BISON][parsedFunctionParser] Building parser with bison 3.8.2 cd /<> && /usr/bin/bison --defines=/<>/build/source/MATHS/parsedFunctionParser.h -pParsedFunction -d -o /<>/build/source/MATHS/parsedFunctionParser.C source/MATHS/parsedFunctionParser.y [ 0%] [FLEX][GAFFCESParserLexer] Building scanner with flex 2.6.4 cd /<> && /usr/bin/flex -PGAFFCESParser -o/<>/build/source/MOLMEC/AMBER/GAFFCESParserLexer.C source/MOLMEC/AMBER/GAFFCESParserLexer.l [ 0%] [BISON][GAFFCESParserParser] Building parser with bison 3.8.2 cd /<> && /usr/bin/bison --defines=/<>/build/source/MOLMEC/AMBER/GAFFCESParserParser.h -pGAFFCESParser -d -o /<>/build/source/MOLMEC/AMBER/GAFFCESParserParser.C source/MOLMEC/AMBER/GAFFCESParserParser.y [ 0%] [FLEX][smartsParserLexer] Building scanner with flex 2.6.4 cd /<> && /usr/bin/flex -PSmartsParser -o/<>/build/source/STRUCTURE/smartsParserLexer.C source/STRUCTURE/smartsParserLexer.l [ 0%] [BISON][smartsParserParser] Building parser with bison 3.8.2 cd /<> && /usr/bin/bison --defines=/<>/build/source/STRUCTURE/smartsParserParser.h -pSmartsParser -d -o /<>/build/source/STRUCTURE/smartsParserParser.C source/STRUCTURE/smartsParserParser.y source/STRUCTURE/smartsParserParser.y: warning: 26 shift/reduce conflicts [-Wconflicts-sr] source/STRUCTURE/smartsParserParser.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples [ 0%] [FLEX][smilesParserLexer] Building scanner with flex 2.6.4 cd /<> && /usr/bin/flex -PSmilesParser -o/<>/build/source/STRUCTURE/smilesParserLexer.C source/STRUCTURE/smilesParserLexer.l [ 0%] [BISON][smilesParserParser] Building parser with bison 3.8.2 cd /<> && /usr/bin/bison --defines=/<>/build/source/STRUCTURE/smilesParserParser.h -pSmilesParser -d -o /<>/build/source/STRUCTURE/smilesParserParser.C source/STRUCTURE/smilesParserParser.y make[5]: Leaving directory '/<>/build' [ 0%] Built target BALL_autogen_timestamp_deps make -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/BALL_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/build' make -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/build make[5]: Entering directory '/<>/build' [ 0%] Automatic MOC for target BALL /usr/bin/cmake -E cmake_autogen /<>/build/CMakeFiles/BALL_autogen.dir/AutogenInfo.json Release /usr/bin/cmake -E touch /<>/build/BALL_autogen/timestamp make[5]: Leaving directory '/<>/build' [ 0%] Built target BALL_autogen make -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/BALL.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/build' make -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/build make[5]: Entering directory '/<>/build' [ 0%] Building CXX object CMakeFiles/BALL.dir/BALL_autogen/mocs_compilation.cpp.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/BALL_autogen/mocs_compilation.cpp.o -MF CMakeFiles/BALL.dir/BALL_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/BALL.dir/BALL_autogen/mocs_compilation.cpp.o -c /<>/build/BALL_autogen/mocs_compilation.cpp [ 0%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/autoDeletable.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/autoDeletable.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/autoDeletable.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/autoDeletable.C.o -c /<>/source/CONCEPT/autoDeletable.C [ 0%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/client.C.o /usr/bin/c++ -DBALL_EXPORTS 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-fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/client.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/client.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/client.C.o -c /<>/source/CONCEPT/client.C [ 0%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/composite.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/composite.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/composite.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/composite.C.o -c /<>/source/CONCEPT/composite.C [ 0%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/embeddable.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK 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/usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/enumerator.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/enumerator.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/enumerator.C.o -c /<>/source/CONCEPT/enumerator.C [ 0%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/factory.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/factory.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/factory.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/factory.C.o -c /<>/source/CONCEPT/factory.C [ 0%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/object.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/object.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/object.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/object.C.o -c /<>/source/CONCEPT/object.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/objectCreator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/objectCreator.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/objectCreator.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/objectCreator.C.o -c /<>/source/CONCEPT/objectCreator.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/moleculeObjectCreator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/moleculeObjectCreator.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/moleculeObjectCreator.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/moleculeObjectCreator.C.o -c /<>/source/CONCEPT/moleculeObjectCreator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/CONCEPT/moleculeObjectCreator.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/objectCreator.h:9, from /<>/include/BALL/CONCEPT/moleculeObjectCreator.h:9, from /<>/source/CONCEPT/moleculeObjectCreator.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/CONCEPT/moleculeObjectCreator.C:10: /<>/source/CONCEPT/moleculeObjectCreator.C: In member function ‘virtual BALL::Composite* BALL::MoleculeObjectCreator::convertObject(BALL::PersistentObject&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/CONCEPT/moleculeObjectCreator.C:89:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 89 | BALL_FOREACH_BOND(*p, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/CONCEPT/moleculeObjectCreator.C: In member function ‘virtual BALL::Composite* BALL::MoleculeObjectCreator::convertObject(BALL::PersistentObject&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/CONCEPT/moleculeObjectCreator.C:89:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 89 | BALL_FOREACH_BOND(*p, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/CONCEPT/moleculeObjectCreator.C:89:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 89 | BALL_FOREACH_BOND(*p, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/source/CONCEPT/moleculeObjectCreator.C:8: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/CONCEPT/moleculeObjectCreator.C: In member function ‘virtual BALL::Composite* BALL::MoleculeObjectCreator::convertObject(BALL::PersistentObject&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/CONCEPT/moleculeObjectCreator.C:89:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 89 | BALL_FOREACH_BOND(*p, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/CONCEPT/moleculeObjectCreator.C:108:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 108 | BALL_FOREACH_BOND(*s, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/CONCEPT/moleculeObjectCreator.C:108:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 108 | BALL_FOREACH_BOND(*s, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/persistenceManager.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/persistenceManager.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/persistenceManager.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/persistenceManager.C.o -c /<>/source/CONCEPT/persistenceManager.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/CONCEPT/persistenceManager.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/source/CONCEPT/persistenceManager.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/preferencesObject.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/preferencesObject.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/preferencesObject.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/preferencesObject.C.o -c /<>/source/CONCEPT/preferencesObject.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/processor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/processor.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/processor.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/processor.C.o -c /<>/source/CONCEPT/processor.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/property.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/property.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/property.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/property.C.o -c /<>/source/CONCEPT/property.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/selectable.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/selectable.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/selectable.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/selectable.C.o -c /<>/source/CONCEPT/selectable.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/textPersistenceManager.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/textPersistenceManager.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/textPersistenceManager.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/textPersistenceManager.C.o -c /<>/source/CONCEPT/textPersistenceManager.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/timeStamp.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/timeStamp.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/timeStamp.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/timeStamp.C.o -c /<>/source/CONCEPT/timeStamp.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/visitor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/visitor.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/visitor.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/visitor.C.o -c /<>/source/CONCEPT/visitor.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/CONCEPT/molecularInformation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/CONCEPT/molecularInformation.C.o -MF CMakeFiles/BALL.dir/source/CONCEPT/molecularInformation.C.o.d -o CMakeFiles/BALL.dir/source/CONCEPT/molecularInformation.C.o -c /<>/source/CONCEPT/molecularInformation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/CONCEPT/molecularInformation.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/CONCEPT/molecularInformation.h:9, from /<>/source/CONCEPT/molecularInformation.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/constants.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/COMMON/constants.C.o -MF CMakeFiles/BALL.dir/source/COMMON/constants.C.o.d -o CMakeFiles/BALL.dir/source/COMMON/constants.C.o -c /<>/source/COMMON/constants.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/exception.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/COMMON/exception.C.o -MF CMakeFiles/BALL.dir/source/COMMON/exception.C.o.d -o CMakeFiles/BALL.dir/source/COMMON/exception.C.o -c /<>/source/COMMON/exception.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/hash.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK 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-I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/COMMON/hash.C.o -MF CMakeFiles/BALL.dir/source/COMMON/hash.C.o.d -o CMakeFiles/BALL.dir/source/COMMON/hash.C.o -c /<>/source/COMMON/hash.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/init.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/COMMON/init.C.o -MF CMakeFiles/BALL.dir/source/COMMON/init.C.o.d -o CMakeFiles/BALL.dir/source/COMMON/init.C.o -c /<>/source/COMMON/init.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/logStream.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/COMMON/logStream.C.o -MF CMakeFiles/BALL.dir/source/COMMON/logStream.C.o.d -o CMakeFiles/BALL.dir/source/COMMON/logStream.C.o -c /<>/source/COMMON/logStream.C In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/source/COMMON/logStream.C:13: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const BALL::LogStreamBuf::LoglineStruct&}; _Tp = BALL::LogStreamBuf::LoglineStruct; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::LogStreamBuf::LoglineStruct; _Alloc = std::allocator]’, inlined from ‘int BALL::LogStreamBuf::sync(bool)’ at /<>/source/COMMON/logStream.C:140:25: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/rtti.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/COMMON/rtti.C.o -MF CMakeFiles/BALL.dir/source/COMMON/rtti.C.o.d -o CMakeFiles/BALL.dir/source/COMMON/rtti.C.o -c /<>/source/COMMON/rtti.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/COMMON/version.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/COMMON/version.C.o -MF CMakeFiles/BALL.dir/source/COMMON/version.C.o.d -o CMakeFiles/BALL.dir/source/COMMON/version.C.o -c /<>/source/COMMON/version.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/graphAlgorithms.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/graphAlgorithms.C.o -MF CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/graphAlgorithms.C.o.d -o CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/graphAlgorithms.C.o -c /<>/source/DATATYPE/GRAPH/graphAlgorithms.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/molecularGraph.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/molecularGraph.C.o -MF CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/molecularGraph.C.o.d -o CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/molecularGraph.C.o -c /<>/source/DATATYPE/GRAPH/molecularGraph.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/DATATYPE/GRAPH/molecularGraph.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/DATATYPE/GRAPH/molecularGraph.C:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/treeWidth.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/treeWidth.C.o -MF CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/treeWidth.C.o.d -o CMakeFiles/BALL.dir/source/DATATYPE/GRAPH/treeWidth.C.o -c /<>/source/DATATYPE/GRAPH/treeWidth.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/bitVector.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB 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/usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DATATYPE/contourSurface.C.o -MF CMakeFiles/BALL.dir/source/DATATYPE/contourSurface.C.o.d -o CMakeFiles/BALL.dir/source/DATATYPE/contourSurface.C.o -c /<>/source/DATATYPE/contourSurface.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/hashGrid.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK 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CMakeFiles/BALL.dir/source/DATATYPE/hashGrid.C.o -c /<>/source/DATATYPE/hashGrid.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/options.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DATATYPE/options.C.o -MF CMakeFiles/BALL.dir/source/DATATYPE/options.C.o.d -o CMakeFiles/BALL.dir/source/DATATYPE/options.C.o -c /<>/source/DATATYPE/options.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularExpression.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB 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/<>/source/DATATYPE/regularExpression.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularData1D.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DATATYPE/regularData1D.C.o -MF CMakeFiles/BALL.dir/source/DATATYPE/regularData1D.C.o.d -o CMakeFiles/BALL.dir/source/DATATYPE/regularData1D.C.o -c /<>/source/DATATYPE/regularData1D.C [ 6%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularData2D.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DATATYPE/regularData2D.C.o -MF CMakeFiles/BALL.dir/source/DATATYPE/regularData2D.C.o.d -o CMakeFiles/BALL.dir/source/DATATYPE/regularData2D.C.o -c /<>/source/DATATYPE/regularData2D.C [ 12%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/regularData3D.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DATATYPE/regularData3D.C.o -MF CMakeFiles/BALL.dir/source/DATATYPE/regularData3D.C.o.d -o CMakeFiles/BALL.dir/source/DATATYPE/regularData3D.C.o -c /<>/source/DATATYPE/regularData3D.C [ 12%] Building CXX object CMakeFiles/BALL.dir/source/DATATYPE/string.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DATATYPE/string.C.o -MF CMakeFiles/BALL.dir/source/DATATYPE/string.C.o.d -o CMakeFiles/BALL.dir/source/DATATYPE/string.C.o -c /<>/source/DATATYPE/string.C [ 12%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/atomicContactEnergy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/ENERGY/atomicContactEnergy.C.o -MF CMakeFiles/BALL.dir/source/ENERGY/atomicContactEnergy.C.o.d -o CMakeFiles/BALL.dir/source/ENERGY/atomicContactEnergy.C.o -c /<>/source/ENERGY/atomicContactEnergy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/ENERGY/atomicContactEnergy.C:16: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/hashGrid.h:25, from /<>/source/ENERGY/atomicContactEnergy.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/DATATYPE/hashSet.h:17, from /<>/include/BALL/SYSTEM/file.h:16, from /<>/source/ENERGY/atomicContactEnergy.C:10: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:237:76: required from ‘BALL::ForwardIterator& BALL::ForwardIterator::operator=(const BALL::ForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/source/ENERGY/atomicContactEnergy.C:250:37: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared ‘BALL::HashGridBox3::BoxIteratorTraits& BALL::HashGridBox3::BoxIteratorTraits::operator=(const BALL::HashGridBox3::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ /<>/include/BALL/DATATYPE/hashGrid.h:209:25: note: because ‘BALL::HashGridBox3::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = BALL::ACEFastAtomType*]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = BALL::ACEFastAtomType*; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::ACEFastAtomType*; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:563:21: required from ‘void BALL::HashGridBox3::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::ACEFastAtomType*; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:206:13: required from ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3&) [with Item = BALL::ACEFastAtomType*]’ /<>/include/BALL/CONCEPT/baseIterator.h:190:6: required from ‘BALL::BaseIterator::BaseIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:128:67: required from ‘BALL::ConstForwardIterator::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:298:20: required from ‘BALL::ForwardIterator::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:309:19: required from ‘static BALL::ForwardIterator BALL::ForwardIterator::begin(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/DATATYPE/hashGrid.h:332:29: required from ‘BALL::HashGridBox3::BoxIterator BALL::HashGridBox3::beginBox() [with Item = BALL::ACEFastAtomType*; BoxIterator = BALL::ForwardIterator, BALL::HashGridBox3, unsigned int, BALL::HashGridBox3::BoxIteratorTraits>]’ /<>/source/ENERGY/atomicContactEnergy.C:250:36: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ [ 12%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/composedEnergyProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/ENERGY/composedEnergyProcessor.C.o -MF CMakeFiles/BALL.dir/source/ENERGY/composedEnergyProcessor.C.o.d -o CMakeFiles/BALL.dir/source/ENERGY/composedEnergyProcessor.C.o -c /<>/source/ENERGY/composedEnergyProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/ENERGY/composedEnergyProcessor.h:15, from /<>/source/ENERGY/composedEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/coulomb.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/ENERGY/coulomb.C.o -MF CMakeFiles/BALL.dir/source/ENERGY/coulomb.C.o.d -o CMakeFiles/BALL.dir/source/ENERGY/coulomb.C.o -c /<>/source/ENERGY/coulomb.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/ENERGY/coulomb.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/ENERGY/coulomb.C:7: /<>/source/ENERGY/coulomb.C: In function ‘double BALL::calculateCoulomb(const AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:90:55: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 90 | for (first_atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/ENERGY/coulomb.C:23:17: note: in expansion of macro ‘BALL_FOREACH_ATOM_PAIR’ 23 | BALL_FOREACH_ATOM_PAIR(atoms, atom_it1, atom_it2) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:92:58: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 92 | for (second_atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/ENERGY/coulomb.C:23:17: note: in expansion of macro ‘BALL_FOREACH_ATOM_PAIR’ 23 | BALL_FOREACH_ATOM_PAIR(atoms, atom_it1, atom_it2) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/distanceCoulomb.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/ENERGY/distanceCoulomb.C.o -MF CMakeFiles/BALL.dir/source/ENERGY/distanceCoulomb.C.o.d -o CMakeFiles/BALL.dir/source/ENERGY/distanceCoulomb.C.o -c /<>/source/ENERGY/distanceCoulomb.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/ENERGY/distanceCoulomb.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/ENERGY/distanceCoulomb.C:8: /<>/source/ENERGY/distanceCoulomb.C: In function ‘double BALL::calculateDistanceCoulomb(const AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:90:55: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 90 | for (first_atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/ENERGY/distanceCoulomb.C:30:17: note: in expansion of macro ‘BALL_FOREACH_ATOM_PAIR’ 30 | BALL_FOREACH_ATOM_PAIR(atoms, atom_iterator1, atom_iterator2) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:92:58: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 92 | for (second_atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/ENERGY/distanceCoulomb.C:30:17: note: in expansion of macro ‘BALL_FOREACH_ATOM_PAIR’ 30 | BALL_FOREACH_ATOM_PAIR(atoms, atom_iterator1, atom_iterator2) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object CMakeFiles/BALL.dir/source/ENERGY/energyProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/ENERGY/energyProcessor.C.o -MF CMakeFiles/BALL.dir/source/ENERGY/energyProcessor.C.o.d -o CMakeFiles/BALL.dir/source/ENERGY/energyProcessor.C.o -c /<>/source/ENERGY/energyProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/source/ENERGY/energyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/amiraMeshFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/amiraMeshFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/amiraMeshFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/amiraMeshFile.C.o -c /<>/source/FORMAT/amiraMeshFile.C [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/antechamberFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/antechamberFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/antechamberFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/antechamberFile.C.o -c /<>/source/FORMAT/antechamberFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/antechamberFile.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/FORMAT/antechamberFile.C:8: /<>/source/FORMAT/antechamberFile.C: In member function ‘virtual bool BALL::AntechamberFile::write(const BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/antechamberFile.C:133:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 133 | BALL_FOREACH_BOND(ac, at_it, bit) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/antechamberFile.C:133:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 133 | BALL_FOREACH_BOND(ac, at_it, bit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/antechamberFile.C: In member function ‘virtual bool BALL::AntechamberFile::write(const BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/antechamberFile.C:133:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 133 | BALL_FOREACH_BOND(ac, at_it, bit) | ^~~~~~~~~~~~~~~~~ [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/bruker1DFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/bruker1DFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/bruker1DFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/bruker1DFile.C.o -c /<>/source/FORMAT/bruker1DFile.C [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/bruker2DFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/bruker2DFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/bruker2DFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/bruker2DFile.C.o -c /<>/source/FORMAT/bruker2DFile.C [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/commandlineParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/commandlineParser.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/commandlineParser.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/commandlineParser.C.o -c /<>/source/FORMAT/commandlineParser.C In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/DATATYPE/options.h:11, from /<>/include/BALL/FORMAT/commandlineParser.h:4, from /<>/source/FORMAT/commandlineParser.C:5: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘void BALL::CommandlineParser::registerAdvancedParameters(BALL::Options&)’ at /<>/source/FORMAT/commandlineParser.C:406:30: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/dockResultFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/dockResultFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/dockResultFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/dockResultFile.C.o -c /<>/source/FORMAT/dockResultFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/FORMAT/dockResultFile.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:10, from /<>/include/BALL/DOCKING/COMMON/receptor.h:14, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/include/BALL/FORMAT/dockResultFile.h:11: /<>/source/FORMAT/dockResultFile.C: In member function ‘void BALL::DockResultFile::writeProtein(BALL::Protein*, QXmlStreamWriter&)’: /<>/include/BALL/KERNEL/forEach.h:187:58: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 187 | for (residue_iterator = (residue_container).beginResidue(); \ | ^ /<>/source/FORMAT/dockResultFile.C:806:25: note: in expansion of macro ‘BALL_FOREACH_RESIDUE’ 806 | BALL_FOREACH_RESIDUE(*prot,ri) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/dockResultFile.C: In member function ‘void BALL::DockResultFile::writeProtein(BALL::Protein*, QXmlStreamWriter&)’: /<>/include/BALL/KERNEL/forEach.h:187:58: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ first required here 187 | for (residue_iterator = (residue_container).beginResidue(); \ | ^ /<>/source/FORMAT/dockResultFile.C:806:25: note: in expansion of macro ‘BALL_FOREACH_RESIDUE’ 806 | BALL_FOREACH_RESIDUE(*prot,ri) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/dockResultFile.C: In member function ‘void BALL::DockResultFile::writeResidue(BALL::Residue*, QXmlStreamWriter&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/dockResultFile.C:820:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 820 | BALL_FOREACH_ATOM(*res, pai) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/dockResultFile.C: In member function ‘void BALL::DockResultFile::writeResidue(BALL::Residue*, QXmlStreamWriter&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/dockResultFile.C:820:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 820 | BALL_FOREACH_ATOM(*res, pai) | ^~~~~~~~~~~~~~~~~ /<>/source/FORMAT/dockResultFile.C: In member function ‘void BALL::DockResultFile::writeMolecule(BALL::Molecule*, QXmlStreamWriter&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/dockResultFile.C:982:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 982 | BALL_FOREACH_ATOM(*molecule, a_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/dockResultFile.C:990:52: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 990 | a_it = molecule->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/dockResultFile.C:991:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 991 | BALL_FOREACH_ATOM(*molecule, a_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/dockResultFile.C:1001:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1001 | BALL_FOREACH_BOND(*molecule, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/dockResultFile.C:1001:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1001 | BALL_FOREACH_BOND(*molecule, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/FORMAT/PDBdefs.h:13: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/dockResultFile.C: In member function ‘void BALL::DockResultFile::writeMolecule(BALL::Molecule*, QXmlStreamWriter&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/dockResultFile.C:1001:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1001 | BALL_FOREACH_BOND(*molecule, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/source/FORMAT/dockResultFile.C:1007:52: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 1007 | a_it = molecule->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/dockResultFile.C:1008:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 1008 | BALL_FOREACH_ATOM(*molecule, a_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/CCP4File.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/CCP4File.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/CCP4File.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/CCP4File.C.o -c /<>/source/FORMAT/CCP4File.C [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/CIFFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/CIFFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/CIFFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/CIFFile.C.o -c /<>/source/FORMAT/CIFFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from /<>/source/FORMAT/CIFFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/FORMAT/CIFFile.h: In member function ‘BALL::CIFFile::SaveFrame& BALL::CIFFile::SaveFrame::operator=(const BALL::CIFFile::SaveFrame&)’: /<>/include/BALL/FORMAT/CIFFile.h:76:31: warning: implicitly-declared ‘BALL::CIFFile::Item& BALL::CIFFile::Item::operator=(const BALL::CIFFile::Item&)’ is deprecated [-Wdeprecated-copy] 76 | class SaveFrame | ^~~~~~~~~ /<>/source/FORMAT/CIFFile.C:134:9: note: because ‘BALL::CIFFile::Item’ has user-provided ‘BALL::CIFFile::Item::Item(const BALL::CIFFile::Item&)’ 134 | CIFFile::Item::Item(const Item& item) | ^~~~~~~ /<>/source/FORMAT/CIFFile.C: In constructor ‘BALL::CIFFile::Datacontent::Datacontent(BALL::CIFFile::SaveFrame)’: /<>/source/FORMAT/CIFFile.C:379:29: note: synthesized method ‘BALL::CIFFile::SaveFrame& BALL::CIFFile::SaveFrame::operator=(const BALL::CIFFile::SaveFrame&)’ first required here 379 | saveframe = new_saveframe; | ^~~~~~~~~~~~~ /<>/source/FORMAT/CIFFile.C: In constructor ‘BALL::CIFFile::Datacontent::Datacontent(BALL::CIFFile::Item)’: /<>/source/FORMAT/CIFFile.C:385:28: warning: implicitly-declared ‘BALL::CIFFile::Item& BALL::CIFFile::Item::operator=(const BALL::CIFFile::Item&)’ is deprecated [-Wdeprecated-copy] 385 | dataitem = new_item; | ^~~~~~~~ /<>/source/FORMAT/CIFFile.C:134:9: note: because ‘BALL::CIFFile::Item’ has user-provided ‘BALL::CIFFile::Item::Item(const BALL::CIFFile::Item&)’ 134 | CIFFile::Item::Item(const Item& item) | ^~~~~~~ [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/DCDFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/DCDFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/DCDFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/DCDFile.C.o -c /<>/source/FORMAT/DCDFile.C [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/DSN6File.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/DSN6File.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/DSN6File.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/DSN6File.C.o -c /<>/source/FORMAT/DSN6File.C [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatFile.C.o -c /<>/source/FORMAT/GAMESSDatFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/GAMESSDatFile.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/GAMESSDatFile.C: In member function ‘virtual bool BALL::GAMESSDatFile::write(const BALL::System&)’: /<>/source/FORMAT/GAMESSDatFile.C:88:46: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 88 | for (atIt = system.beginAtom(); +atIt; ++atIt) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/genericMolFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/genericMolFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/genericMolFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/genericMolFile.C.o -c /<>/source/FORMAT/genericMolFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/genericMolFile.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/HINFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/HINFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/HINFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/HINFile.C.o -c /<>/source/FORMAT/HINFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/FORMAT/HINFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/FORMAT/HINFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/HINFile.C: In member function ‘virtual bool BALL::HINFile::write(const BALL::System&)’: /<>/source/FORMAT/HINFile.C:153:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 153 | for (atom_it = system.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/HINFile.C:377:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 377 | for (atom_it = system.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/HMOFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/HMOFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/HMOFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/HMOFile.C.o -c /<>/source/FORMAT/HMOFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/HMOFile.h:11, from /<>/source/FORMAT/HMOFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/INIFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/INIFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/INIFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/INIFile.C.o -c /<>/source/FORMAT/INIFile.C [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/JCAMPFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/JCAMPFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/JCAMPFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/JCAMPFile.C.o -c /<>/source/FORMAT/JCAMPFile.C In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/lineBasedFile.h:9, from /<>/include/BALL/FORMAT/JCAMPFile.h:9, from /<>/source/FORMAT/JCAMPFile.C:6: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘void BALL::JCAMPFile::read()’ at /<>/source/FORMAT/JCAMPFile.C:93:39: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘void BALL::JCAMPFile::read()’ at /<>/source/FORMAT/JCAMPFile.C:115:39: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘void BALL::JCAMPFile::read()’ at /<>/source/FORMAT/JCAMPFile.C:143:37: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/KCFFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/KCFFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/KCFFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/KCFFile.C.o -c /<>/source/FORMAT/KCFFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/FORMAT/KCFFile.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/KCFFile.h:13, from /<>/source/FORMAT/KCFFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/KCFFile.C: In member function ‘virtual bool BALL::KCFFile::write(const BALL::Molecule&)’: /<>/source/FORMAT/KCFFile.C:91:46: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 91 | for (ai = molecule.beginAtom(); +ai; ++ai) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/lineBasedFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/lineBasedFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/lineBasedFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/lineBasedFile.C.o -c /<>/source/FORMAT/lineBasedFile.C [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOLFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/MOLFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/MOLFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/MOLFile.C.o -c /<>/source/FORMAT/MOLFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/FORMAT/MOLFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/source/FORMAT/MOLFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/FORMAT/MOLFile.C:11: /<>/source/FORMAT/MOLFile.C: In member function ‘virtual bool BALL::MOLFile::write(const BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/MOLFile.C:164:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 164 | BALL_FOREACH_BOND(molecule, it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/MOLFile.C:164:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 164 | BALL_FOREACH_BOND(molecule, it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/source/FORMAT/MOLFile.C:6: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/MOLFile.C: In member function ‘virtual bool BALL::MOLFile::write(const BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/MOLFile.C:164:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 164 | BALL_FOREACH_BOND(molecule, it, bond_it) | ^~~~~~~~~~~~~~~~~ [ 12%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/molFileFactory.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/molFileFactory.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/molFileFactory.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/molFileFactory.C.o -c /<>/source/FORMAT/molFileFactory.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/FORMAT/molFileFactory.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOPACInputFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/MOPACInputFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/MOPACInputFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/MOPACInputFile.C.o -c /<>/source/FORMAT/MOPACInputFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOPACInputFile.h:17, from /<>/source/FORMAT/MOPACInputFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOPACOutputFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/MOPACOutputFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/MOPACOutputFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/MOPACOutputFile.C.o -c /<>/source/FORMAT/MOPACOutputFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOPACOutputFile.h:17, from /<>/source/FORMAT/MOPACOutputFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/SDFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/SDFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/SDFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/SDFile.C.o -c /<>/source/FORMAT/SDFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/FORMAT/SDFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOLFile.h:13, from /<>/include/BALL/FORMAT/SDFile.h:9, from /<>/source/FORMAT/SDFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/MOL2File.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/MOL2File.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/MOL2File.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/MOL2File.C.o -c /<>/source/FORMAT/MOL2File.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/FORMAT/MOL2File.h:17, from /<>/source/FORMAT/MOL2File.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/FORMAT/MOL2File.h:13: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/FORMAT/MOL2File.C:15: /<>/source/FORMAT/MOL2File.C: In member function ‘virtual bool BALL::MOL2File::write(const BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/MOL2File.C:127:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 127 | BALL_FOREACH_BOND(new_molecule, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/MOL2File.C:127:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 127 | BALL_FOREACH_BOND(new_molecule, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/MOL2File.C: In member function ‘virtual bool BALL::MOL2File::write(const BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/MOL2File.C:127:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 127 | BALL_FOREACH_BOND(new_molecule, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/source/FORMAT/MOL2File.C:162:50: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 162 | atom_it = new_molecule.beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/FORMAT/MOL2File.C:212:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 212 | BALL_FOREACH_BOND(new_molecule, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/FORMAT/MOL2File.C:212:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 212 | BALL_FOREACH_BOND(new_molecule, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/MOL2File.C: In member function ‘bool BALL::MOL2File::containsAtomChilds_(BALL::AtomContainerConstIterator&)’: /<>/source/FORMAT/MOL2File.C:993:65: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 993 | for (children_it = frag_it->beginChildComposite(); +children_it; ++children_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::ChildCompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/NMRStarFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/NMRStarFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/NMRStarFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/NMRStarFile.C.o -c /<>/source/FORMAT/NMRStarFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from /<>/include/BALL/FORMAT/NMRStarFile.h:9, from /<>/source/FORMAT/NMRStarFile.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/NMRStarFile.C: In member function ‘bool BALL::NMRStarFile::assignShifts_(BALLToBMRBMapper&)’: /<>/source/FORMAT/NMRStarFile.C:1204:98: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 1204 | r_it = const_cast(ball_to_bmrb_mapping.getChain())->beginResidue(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/NMRStarFile.C: In member function ‘bool BALL::NMRStarFile::assignShifts_(BALLToBMRBMapper&)’: /<>/source/FORMAT/NMRStarFile.C:1204:98: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ first required here 1204 | r_it = const_cast(ball_to_bmrb_mapping.getChain())->beginResidue(); | ^ /<>/source/FORMAT/NMRStarFile.C: In member function ‘int BALL::NMRStarFile::valueToInt_(BALL::String)’: /<>/source/FORMAT/NMRStarFile.C:2277:45: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 2277 | } catch (Exception::InvalidFormat) { | ^~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/paramFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/paramFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/paramFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/paramFile.C.o -c /<>/source/FORMAT/paramFile.C [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/parameters.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/parameters.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/parameters.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/parameters.C.o -c /<>/source/FORMAT/parameters.C /<>/source/FORMAT/parameters.C: In copy constructor ‘BALL::Parameters::Parameters(const BALL::Parameters&)’: /<>/source/FORMAT/parameters.C:19:25: warning: implicitly-declared ‘BALL::INIFile::INIFile(const BALL::INIFile&)’ is deprecated [-Wdeprecated-copy] 19 | INI_file_(parameters.INI_file_) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/FORMAT/parameters.h:12, from /<>/source/FORMAT/parameters.C:7: /<>/include/BALL/FORMAT/INIFile.h:378:32: note: because ‘BALL::INIFile’ has user-provided ‘const BALL::INIFile& BALL::INIFile::operator=(const BALL::INIFile&)’ 378 | const INIFile& operator = (const INIFile& file) | ^~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/parameterSection.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/parameterSection.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/parameterSection.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/parameterSection.C.o -c /<>/source/FORMAT/parameterSection.C [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBdefs.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/PDBdefs.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/PDBdefs.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/PDBdefs.C.o -c /<>/source/FORMAT/PDBdefs.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/source/FORMAT/PDBdefs.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:13: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBFileGeneral.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/PDBFileGeneral.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/PDBFileGeneral.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/PDBFileGeneral.C.o -c /<>/source/FORMAT/PDBFileGeneral.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/FORMAT/PDBFileGeneral.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/PDBFileGeneral.C: In member function ‘bool BALL::PDBFile::parseLine(const char*, BALL::Size, const char*, ...)’: /<>/source/FORMAT/PDBFileGeneral.C:381:24: warning: ‘char* __builtin_strncpy(char*, const char*, unsigned int)’ output truncated before terminating nul copying 4 bytes from a string of the same length [-Wstringop-truncation] 381 | strncpy(formats, "%.6s", 4); | ^ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBFileDetails.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/PDBFileDetails.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/PDBFileDetails.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/PDBFileDetails.C.o -c /<>/source/FORMAT/PDBFileDetails.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/FORMAT/PDBFileDetails.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/PDBFileDetails.C: In member function ‘void BALL::PDBFile::postprocessSheetsTurns_(QuadrupleList&, SecStructList&)’: /<>/source/FORMAT/PDBFileDetails.C:195:86: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 195 | for (protein_res_it = current_protein_->beginResidue(); !protein_res_it.isEnd(); ++protein_res_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/PDBFileDetails.C: In member function ‘void BALL::PDBFile::postprocessSheetsTurns_(QuadrupleList&, SecStructList&)’: /<>/source/FORMAT/PDBFileDetails.C:195:86: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ first required here 195 | for (protein_res_it = current_protein_->beginResidue(); !protein_res_it.isEnd(); ++protein_res_it) | ^ /<>/source/FORMAT/PDBFileDetails.C: In member function ‘void BALL::PDBFile::postprocessRandomCoils_()’: /<>/source/FORMAT/PDBFileDetails.C:287:70: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 287 | for (protein_res_it = chain_it->beginResidue(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/PDBFileDetails.C: In static member function ‘static void BALL::PDBFile::updateAdditionalAtomInfo_(const BALL::PDB::Structure::AtomEntry&, BALL::PDB::AdditionalAtomInfo&)’: /<>/source/FORMAT/PDBFileDetails.C:1460:40: warning: ‘char* __builtin_strncpy(char*, const char*, unsigned int)’ specified bound 4 equals destination size [-Wstringop-truncation] 1460 | strncpy(aai.residue_name, atom.residue->getName().c_str(), 4); | ^ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/property.h:11: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {BALL::PDB::Structure::NCSMatrix}; _Tp = BALL::PDB::Structure::NCSMatrix; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /<>/source/FORMAT/PDBFileDetails.C: In member function ‘void BALL::PDBFile::writeSEQRESSection_(const std::vector >&)’: /<>/source/FORMAT/PDBFileDetails.C:1785:32: warning: ‘char* __builtin___strncpy_chk(char*, const char*, unsigned int, unsigned int)’ output may be truncated copying 3 bytes from a string of length 3 [-Wstringop-truncation] 1785 | strncpy(sr.residue_name[res_counter++], seq, 3); | ^ /<>/source/FORMAT/PDBFileDetails.C: In member function ‘void BALL::PDBFile::writeCoordinateSection_(const BALL::PDB::Structure&, const BALL::PDBInfo&)’: /<>/source/FORMAT/PDBFileDetails.C:1553:40: warning: ‘char* __builtin_strncpy(char*, const char*, unsigned int)’ specified bound 4 equals destination size [-Wstringop-truncation] 1553 | strncpy(atom_info.residue_name, atom_info.current_residue->getName().c_str(), 4); | ^ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {BALL::PDB::Structure::NCSMatrix}; _Tp = BALL::PDB::Structure::NCSMatrix; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = BALL::PDB::Structure::NCSMatrix; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘static void BALL::PDBFile::extractStructure_(const BALL::AtomContainer&, BALL::PDB::Structure&)’ at /<>/source/FORMAT/PDBFileDetails.C:1309:40: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBInfo.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/PDBInfo.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/PDBInfo.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/PDBInfo.C.o -c /<>/source/FORMAT/PDBInfo.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBInfo.h:16, from /<>/source/FORMAT/PDBInfo.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/FORMAT/PDBRecords.h:16, from /<>/include/BALL/FORMAT/PDBInfo.h:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/PDBRecords.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/PDBRecords.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/PDBRecords.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/PDBRecords.C.o -c /<>/source/FORMAT/PDBRecords.C [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/pubchemDownloader.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/pubchemDownloader.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/pubchemDownloader.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/pubchemDownloader.C.o -c /<>/source/FORMAT/pubchemDownloader.C [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/resourceFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/resourceFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/resourceFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/resourceFile.C.o -c /<>/source/FORMAT/resourceFile.C [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/SCWRLRotamerFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/SCWRLRotamerFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/SCWRLRotamerFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/SCWRLRotamerFile.C.o -c /<>/source/FORMAT/SCWRLRotamerFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/source/FORMAT/SCWRLRotamerFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/trajectoryFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/trajectoryFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/trajectoryFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/trajectoryFile.C.o -c /<>/source/FORMAT/trajectoryFile.C [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/trajectoryFileFactory.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/trajectoryFileFactory.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/trajectoryFileFactory.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/trajectoryFileFactory.C.o -c /<>/source/FORMAT/trajectoryFileFactory.C /<>/source/FORMAT/trajectoryFileFactory.C: In static member function ‘static BALL::TrajectoryFile* BALL::TrajectoryFileFactory::detectFormat(const BALL::String&)’: /<>/source/FORMAT/trajectoryFileFactory.C:103:75: warning: unused parameter ‘name’ [-Wunused-parameter] 103 | TrajectoryFile* TrajectoryFileFactory::detectFormat(const String& name) | ~~~~~~~~~~~~~~^~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/TRRFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/TRRFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/TRRFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/TRRFile.C.o -c /<>/source/FORMAT/TRRFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/FORMAT/TRRFile.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/FORMAT/trajectoryFile.h:13, from /<>/include/BALL/FORMAT/TRRFile.h:9, from /<>/source/FORMAT/TRRFile.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/XYZFile.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/XYZFile.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/XYZFile.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/XYZFile.C.o -c /<>/source/FORMAT/XYZFile.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/FORMAT/XYZFile.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/CIFParserParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/CIFParserParser.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/CIFParserParser.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/CIFParserParser.C.o -c /<>/build/source/FORMAT/CIFParserParser.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from source/FORMAT/CIFParserParser.y:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/build/source/FORMAT/CIFParserParser.C: In function ‘int CIFParserparse()’: /<>/build/source/FORMAT/CIFParserParser.C:1662:20: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 1662 | yyerror (YY_("syntax error")); | ^~~~~~~~~~~~~~ /<>/build/source/FORMAT/CIFParserParser.C:309:22: note: in definition of macro ‘YY_’ 309 | # define YY_(Msgid) Msgid | ^~~~~ /<>/build/source/FORMAT/CIFParserParser.C:1773:16: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 1773 | yyerror (YY_("memory exhausted")); | ^~~~~~~~~~~~~~~~~~ /<>/build/source/FORMAT/CIFParserParser.C:309:22: note: in definition of macro ‘YY_’ 309 | # define YY_(Msgid) Msgid | ^~~~~ source/FORMAT/CIFParserParser.y:239:33: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] In file included from /usr/include/stdio.h:980, from /usr/include/c++/13/cstdio:42, from /usr/include/c++/13/ext/string_conversions.h:45, from /usr/include/c++/13/bits/basic_string.h:4109, from /usr/include/c++/13/string:54, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:9: In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:239:18: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 2 and 2551 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:236:33: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:236:18: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 2 and 2551 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:233:33: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:233:18: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 1 and 5099 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:230:33: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 0 and 2549 [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:230:18: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 2 and 5100 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:227:33: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:227:18: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 1 and 5099 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:219:89: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:219:74: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 2 and 2551 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:218:71: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:218:56: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 2 and 2551 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:217:33: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 0 and 2549 [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:217:18: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 2 and 5100 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:214:95: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:214:80: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 1 and 5099 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:213:95: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:213:80: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 1 and 5099 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:209:111: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:209:96: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 2 and 2551 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:205:159: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 0 and 2549 [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:205:144: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 2 and 5100 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:204:139: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:204:124: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 1 and 5099 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:203:139: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:203:124: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 1 and 7648 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:198:139: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:198:124: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 2 and 2551 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:197:139: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:197:124: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 2 and 2551 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:196:159: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 0 and 2549 [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:196:144: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 2 and 5100 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:195:139: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:195:124: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 1 and 5099 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ source/FORMAT/CIFParserParser.y: In function ‘int CIFParserparse()’: source/FORMAT/CIFParserParser.y:194:139: warning: ‘%s’ directive writing up to 2549 bytes into a region of size between 1 and 2550 [-Wformat-overflow=] In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘int CIFParserparse()’ at source/FORMAT/CIFParserParser.y:194:124: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 1 and 7648 bytes into a destination of size 2550 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/CIFParserLexer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/CIFParserLexer.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/CIFParserLexer.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/CIFParserLexer.C.o -c /<>/build/source/FORMAT/CIFParserLexer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/FORMAT/CIFFile.h:17, from source/FORMAT/CIFParserLexer.l:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/build/source/FORMAT/CIFParserLexer.C: At global scope: /<>/build/source/FORMAT/CIFParserLexer.C:2176:17: warning: ‘void yyunput(int, char*)’ defined but not used [-Wunused-function] 2176 | static void yyunput (int c, char * yy_bp ) | ^~~~~~~ source/FORMAT/CIFParserLexer.l: In function ‘int CIFParserlex()’: source/FORMAT/CIFParserLexer.l:223:10: warning: ‘char* __builtin_strncpy(char*, const char*, unsigned int)’ output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation] source/FORMAT/CIFParserLexer.l:207:10: warning: ‘char* __builtin_strncpy(char*, const char*, unsigned int)’ output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation] source/FORMAT/CIFParserLexer.l:200:10: warning: ‘char* __builtin_strncpy(char*, const char*, unsigned int)’ output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation] source/FORMAT/CIFParserLexer.l:135:10: warning: ‘char* __builtin_strncpy(char*, const char*, unsigned int)’ output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation] source/FORMAT/CIFParserLexer.l:117:10: warning: ‘char* __builtin_strncpy(char*, const char*, unsigned int)’ output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation] source/FORMAT/CIFParserLexer.l:90:15: warning: ‘char* __builtin_strncpy(char*, const char*, unsigned int)’ output may be truncated copying 2550 bytes from a string of length 8191 [-Wstringop-truncation] [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserParser.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserParser.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserParser.C.o -c /<>/build/source/FORMAT/GAMESSDatParserParser.C [ 18%] Building CXX object CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserLexer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserLexer.C.o -MF CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserLexer.C.o.d -o CMakeFiles/BALL.dir/source/FORMAT/GAMESSDatParserLexer.C.o -c /<>/build/source/FORMAT/GAMESSDatParserLexer.C /<>/build/source/FORMAT/GAMESSDatParserLexer.C:2637:24: warning: ‘void yy_fatal_error(const char*)’ defined but not used [-Wunused-function] 2637 | static void yynoreturn yy_fatal_error (const char* msg ) | ^~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/atom.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/atom.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/atom.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/atom.C.o -c /<>/source/KERNEL/atom.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/KERNEL/atom.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/KERNEL/atom.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/atomContainer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/atomContainer.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/atomContainer.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/atomContainer.C.o -c /<>/source/KERNEL/atomContainer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/atomContainer.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/KERNEL/atomContainer.C:6: /<>/source/KERNEL/atomContainer.C: In member function ‘BALL::Size BALL::AtomContainer::countBonds() const’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/KERNEL/atomContainer.C:230:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 230 | BALL_FOREACH_BOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/KERNEL/atomContainer.C:230:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 230 | BALL_FOREACH_BOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/atomContainer.C: In member function ‘BALL::Size BALL::AtomContainer::countBonds() const’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/KERNEL/atomContainer.C:230:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 230 | BALL_FOREACH_BOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/source/KERNEL/atomContainer.C: In member function ‘BALL::Size BALL::AtomContainer::countInterBonds() const’: /<>/include/BALL/KERNEL/forEach.h:124:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 124 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/KERNEL/atomContainer.C:244:17: note: in expansion of macro ‘BALL_FOREACH_INTERBOND’ 244 | BALL_FOREACH_INTERBOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:126:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 126 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/KERNEL/atomContainer.C:244:17: note: in expansion of macro ‘BALL_FOREACH_INTERBOND’ 244 | BALL_FOREACH_INTERBOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/atomContainer.C: In member function ‘BALL::Size BALL::AtomContainer::countIntraBonds() const’: /<>/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 141 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/KERNEL/atomContainer.C:258:17: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 258 | BALL_FOREACH_INTRABOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 143 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/KERNEL/atomContainer.C:258:17: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 258 | BALL_FOREACH_INTRABOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/atomContainer.C: In member function ‘bool BALL::AtomContainer::applyInterBond(BALL::UnaryProcessor&)’: /<>/include/BALL/KERNEL/forEach.h:124:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 124 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/KERNEL/atomContainer.C:460:17: note: in expansion of macro ‘BALL_FOREACH_INTERBOND’ 460 | BALL_FOREACH_INTERBOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/atomContainer.C: In member function ‘bool BALL::AtomContainer::applyInterBond(BALL::UnaryProcessor&)’: /<>/include/BALL/KERNEL/forEach.h:124:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 124 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/KERNEL/atomContainer.C:460:17: note: in expansion of macro ‘BALL_FOREACH_INTERBOND’ 460 | BALL_FOREACH_INTERBOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:126:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 126 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/KERNEL/atomContainer.C:460:17: note: in expansion of macro ‘BALL_FOREACH_INTERBOND’ 460 | BALL_FOREACH_INTERBOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/atomContainer.C: In member function ‘bool BALL::AtomContainer::applyInterBond(BALL::UnaryProcessor&)’: /<>/include/BALL/KERNEL/forEach.h:126:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 126 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/KERNEL/atomContainer.C:460:17: note: in expansion of macro ‘BALL_FOREACH_INTERBOND’ 460 | BALL_FOREACH_INTERBOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/atomContainer.C: In member function ‘bool BALL::AtomContainer::applyIntraBond(BALL::UnaryProcessor&)’: /<>/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 141 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/KERNEL/atomContainer.C:484:17: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 484 | BALL_FOREACH_INTRABOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 143 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/KERNEL/atomContainer.C:484:17: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 484 | BALL_FOREACH_INTRABOND(*this, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/KERNEL/atomContainer.C:7: /<>/include/BALL/KERNEL/global.h: In instantiation of ‘void BALL::cloneBonds(const AtomContainerType&, AtomContainerType&) [with AtomContainerType = AtomContainer]’: /<>/source/KERNEL/atomContainer.C:91:20: required from here /<>/include/BALL/KERNEL/global.h:79:40: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 79 | for (bond_iter = atom_iter_a->beginBond(); bond_iter != atom_iter_a->endBond(); ++bond_iter) | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/bond.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/bond.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/bond.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/bond.C.o -c /<>/source/KERNEL/bond.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/KERNEL/bond.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/chain.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/chain.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/chain.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/chain.C.o -c /<>/source/KERNEL/chain.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/source/KERNEL/chain.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expression.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/expression.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/expression.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/expression.C.o -c /<>/source/KERNEL/expression.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/source/KERNEL/expression.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/source/KERNEL/expression.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionPredicate.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/expressionPredicate.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/expressionPredicate.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/expressionPredicate.C.o -c /<>/source/KERNEL/expressionPredicate.C [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionTree.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/expressionTree.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/expressionTree.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/expressionTree.C.o -c /<>/source/KERNEL/expressionTree.C [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/expressionParser.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/expressionParser.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/expressionParser.C.o -c /<>/source/KERNEL/expressionParser.C [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/extractors.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/extractors.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/extractors.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/extractors.C.o -c /<>/source/KERNEL/extractors.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/KERNEL/extractors.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/source/KERNEL/extractors.C:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/fragment.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/fragment.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/fragment.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/fragment.C.o -c /<>/source/KERNEL/fragment.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/KERNEL/fragment.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/global.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/global.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/global.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/global.C.o -c /<>/source/KERNEL/global.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/global.h:15, from /<>/source/KERNEL/global.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/global.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/molecularInteractions.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/molecularInteractions.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/molecularInteractions.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/molecularInteractions.C.o -c /<>/source/KERNEL/molecularInteractions.C [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/molecule.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/molecule.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/molecule.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/molecule.C.o -c /<>/source/KERNEL/molecule.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/KERNEL/molecule.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/nucleicAcid.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/nucleicAcid.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/nucleicAcid.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/nucleicAcid.C.o -c /<>/source/KERNEL/nucleicAcid.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/KERNEL/nucleicAcid.h:9, from /<>/source/KERNEL/nucleicAcid.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/nucleotide.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/nucleotide.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/nucleotide.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/nucleotide.C.o -c /<>/source/KERNEL/nucleotide.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/nucleotide.h:9, from /<>/source/KERNEL/nucleotide.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/PDBAtom.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/PDBAtom.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/PDBAtom.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/PDBAtom.C.o -c /<>/source/KERNEL/PDBAtom.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/source/KERNEL/PDBAtom.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/PDBAtom.h:9, from /<>/source/KERNEL/PDBAtom.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/predicate.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/predicate.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/predicate.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/predicate.C.o -c /<>/source/KERNEL/predicate.C [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/protein.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/protein.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/protein.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/protein.C.o -c /<>/source/KERNEL/protein.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/source/KERNEL/protein.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/PTE.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/PTE.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/PTE.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/PTE.C.o -c /<>/source/KERNEL/PTE.C [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/residue.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/residue.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/residue.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/residue.C.o -c /<>/source/KERNEL/residue.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/KERNEL/residue.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/residue.C: In member function ‘BALL::Angle BALL::Residue::getTorsionPsi() const’: /<>/source/KERNEL/residue.C:135:53: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 135 | for (it = beginAtom(); +it; ++it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/residue.C:143:59: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 143 | for (it = next->beginAtom(); +it; ++it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/residue.C: In member function ‘BALL::Angle BALL::Residue::getTorsionPhi() const’: /<>/source/KERNEL/residue.C:199:53: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 199 | for (it = beginAtom(); +it; ++it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/residue.C:207:63: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 207 | for (it = previous->beginAtom(); +it; ++it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/residue.C: In member function ‘BALL::Angle BALL::Residue::getTorsionOmega() const’: /<>/source/KERNEL/residue.C:262:53: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 262 | for (it = beginAtom(); +it; ++it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/KERNEL/residue.C:270:59: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 270 | for (it = next->beginAtom(); +it; ++it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/secondaryStructure.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/secondaryStructure.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/secondaryStructure.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/secondaryStructure.C.o -c /<>/source/KERNEL/secondaryStructure.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/source/KERNEL/secondaryStructure.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/selector.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/selector.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/selector.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/selector.C.o -c /<>/source/KERNEL/selector.C [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/standardPredicates.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/standardPredicates.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/standardPredicates.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/standardPredicates.C.o -c /<>/source/KERNEL/standardPredicates.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/KERNEL/standardPredicates.h:19, from /<>/source/KERNEL/standardPredicates.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/system.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/system.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/system.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/system.C.o -c /<>/source/KERNEL/system.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/KERNEL/system.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionParserParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/expressionParserParser.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/expressionParserParser.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/expressionParserParser.C.o -c /<>/build/source/KERNEL/expressionParserParser.C source/KERNEL/expressionParserParser.y:11:2: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] source/KERNEL/expressionParserParser.y:126:2: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] [ 25%] Building CXX object CMakeFiles/BALL.dir/source/KERNEL/expressionParserLexer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/KERNEL/expressionParserLexer.C.o -MF CMakeFiles/BALL.dir/source/KERNEL/expressionParserLexer.C.o.d -o CMakeFiles/BALL.dir/source/KERNEL/expressionParserLexer.C.o -c /<>/build/source/KERNEL/expressionParserLexer.C /<>/build/source/KERNEL/expressionParserLexer.C:1845:24: warning: ‘void yy_fatal_error(const char*)’ defined but not used [-Wunused-function] 1845 | static void yynoreturn yy_fatal_error (const char* msg ) | ^~~~~~~~~~~~~~ [ 25%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/analyticalGeometry.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MATHS/analyticalGeometry.C.o -MF CMakeFiles/BALL.dir/source/MATHS/analyticalGeometry.C.o.d -o CMakeFiles/BALL.dir/source/MATHS/analyticalGeometry.C.o -c /<>/source/MATHS/analyticalGeometry.C [ 25%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/angle.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MATHS/angle.C.o -MF CMakeFiles/BALL.dir/source/MATHS/angle.C.o.d -o CMakeFiles/BALL.dir/source/MATHS/angle.C.o -c /<>/source/MATHS/angle.C [ 25%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/box3.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MATHS/box3.C.o -MF CMakeFiles/BALL.dir/source/MATHS/box3.C.o.d -o CMakeFiles/BALL.dir/source/MATHS/box3.C.o -c /<>/source/MATHS/box3.C [ 25%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/circle3.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB 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-O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MATHS/surface.C.o -MF CMakeFiles/BALL.dir/source/MATHS/surface.C.o.d -o CMakeFiles/BALL.dir/source/MATHS/surface.C.o -c /<>/source/MATHS/surface.C [ 31%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/vector2.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MATHS/vector2.C.o -MF CMakeFiles/BALL.dir/source/MATHS/vector2.C.o.d -o CMakeFiles/BALL.dir/source/MATHS/vector2.C.o -c /<>/source/MATHS/vector2.C [ 31%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/vector3.C.o /usr/bin/c++ -DBALL_EXPORTS 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-fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MATHS/vector3.C.o -MF CMakeFiles/BALL.dir/source/MATHS/vector3.C.o.d -o CMakeFiles/BALL.dir/source/MATHS/vector3.C.o -c /<>/source/MATHS/vector3.C [ 31%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/vector4.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MATHS/vector4.C.o -MF CMakeFiles/BALL.dir/source/MATHS/vector4.C.o.d -o CMakeFiles/BALL.dir/source/MATHS/vector4.C.o -c /<>/source/MATHS/vector4.C [ 31%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/parsedFunctionParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MATHS/parsedFunctionParser.C.o -MF CMakeFiles/BALL.dir/source/MATHS/parsedFunctionParser.C.o.d -o CMakeFiles/BALL.dir/source/MATHS/parsedFunctionParser.C.o -c /<>/build/source/MATHS/parsedFunctionParser.C [ 31%] Building CXX object CMakeFiles/BALL.dir/source/MATHS/parsedFunctionLexer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MATHS/parsedFunctionLexer.C.o -MF CMakeFiles/BALL.dir/source/MATHS/parsedFunctionLexer.C.o.d -o CMakeFiles/BALL.dir/source/MATHS/parsedFunctionLexer.C.o -c /<>/build/source/MATHS/parsedFunctionLexer.C /<>/build/source/MATHS/parsedFunctionLexer.C:1869:24: warning: ‘void yy_fatal_error(const char*)’ defined but not used [-Wunused-function] 1869 | static void yynoreturn yy_fatal_error (const char* msg ) | ^~~~~~~~~~~~~~ [ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amber.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amber.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amber.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amber.C.o -c /<>/source/MOLMEC/AMBER/amber.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/AMBER/amber.h:14, from /<>/source/MOLMEC/AMBER/amber.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amber.C:11: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function ‘void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)’: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:63: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 105 | values[i] = v.values[i]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:25: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ [ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberBend.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberBend.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberBend.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberBend.C.o -c /<>/source/MOLMEC/AMBER/amberBend.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberBend.h:14, from /<>/source/MOLMEC/AMBER/amberBend.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberBend.C: In member function ‘virtual bool BALL::AmberBend::setup()’: /<>/source/MOLMEC/AMBER/amberBend.C:84:58: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 84 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberBend.C: In member function ‘virtual bool BALL::AmberBend::setup()’: /<>/source/MOLMEC/AMBER/amberBend.C:84:58: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 84 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ /<>/source/MOLMEC/AMBER/amberBend.C:87:44: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 87 | for (it1 = it2, ++it1; +it1 ; ++it1) | ^~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberNonBonded.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberNonBonded.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberNonBonded.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberNonBonded.C.o -c /<>/source/MOLMEC/AMBER/amberNonBonded.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/source/MOLMEC/AMBER/amberNonBonded.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberNonBonded.C: In member function ‘const BALL::AmberNonBonded& BALL::AmberNonBonded::operator=(const BALL::AmberNonBonded&)’: /<>/source/MOLMEC/AMBER/amberNonBonded.C:127:49: warning: implicitly-declared ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ is deprecated [-Wdeprecated-copy] 127 | ForceFieldComponent::operator = (anb); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:17: note: because ‘BALL::ForceFieldComponent’ has user-provided ‘BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)’ 61 | ForceFieldComponent(const ForceFieldComponent& force_field_component); | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h: In member function ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’: /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:34:27: warning: implicitly-declared ‘BALL::ScoringComponent& BALL::ScoringComponent::operator=(const BALL::ScoringComponent&)’ is deprecated [-Wdeprecated-copy] 34 | class BALL_EXPORT ForceFieldComponent : public ScoringComponent | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/SCORING/COMMON/scoringComponent.h:26:25: note: because ‘BALL::ScoringComponent’ has user-provided ‘BALL::ScoringComponent::ScoringComponent(const BALL::ScoringComponent&)’ 26 | ScoringComponent(const ScoringComponent& sc); | ^~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberNonBonded.C: In member function ‘const BALL::AmberNonBonded& BALL::AmberNonBonded::operator=(const BALL::AmberNonBonded&)’: /<>/source/MOLMEC/AMBER/amberNonBonded.C:127:49: note: synthesized method ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ first required here 127 | ForceFieldComponent::operator = (anb); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ [ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberStretch.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberStretch.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberStretch.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberStretch.C.o -c /<>/source/MOLMEC/AMBER/amberStretch.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/AMBER/amberStretch.h:14, from /<>/source/MOLMEC/AMBER/amberStretch.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberTorsion.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberTorsion.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberTorsion.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/amberTorsion.C.o -c /<>/source/MOLMEC/AMBER/amberTorsion.C In file included from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:15, from /<>/source/MOLMEC/AMBER/amberTorsion.C:5: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function ‘void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)’: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:63: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 105 | values[i] = v.values[i]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:25: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberTorsion.h:19: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberTorsion.C: In member function ‘virtual bool BALL::AmberTorsion::setup()’: /<>/source/MOLMEC/AMBER/amberTorsion.C:115:58: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 115 | for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberTorsion.C: In member function ‘virtual bool BALL::AmberTorsion::setup()’: /<>/source/MOLMEC/AMBER/amberTorsion.C:115:58: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 115 | for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1) | ^ /<>/source/MOLMEC/AMBER/amberTorsion.C:124:74: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 124 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberTorsion.C:139:119: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 139 | for (it3 = const_cast(it1->getSecondAtom())->beginBond(); +it3 ; ++it3) | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberTorsion.C:186:125: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 186 | tmp.values = values.values[j]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:25: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberTorsion.C:296:74: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 296 | for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1) | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberTorsion.C:301:60: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 301 | for (it2 = it1, ++it2; +it2 ; it2++) | ^~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberTorsion.C:305:68: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 305 | for (it3 = it2, ++it3; +it3 ; it3++) | ^~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/amberTorsion.C:362:117: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 362 | tmp.values = values.values[j]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:25: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ [ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFTypeProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFTypeProcessor.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFTypeProcessor.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFTypeProcessor.C.o -c /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:29, from /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:6: /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C: In member function ‘void BALL::GAFFTypeProcessor::annotateBondTypes_()’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:289:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 289 | BALL_FOREACH_BOND(*current_molecule_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C: In member function ‘void BALL::GAFFTypeProcessor::annotateBondTypes_()’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:289:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 289 | BALL_FOREACH_BOND(*current_molecule_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:289:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 289 | BALL_FOREACH_BOND(*current_molecule_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8, from /<>/include/BALL/MOLMEC/AMBER/GAFFTypeProcessor.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C: In member function ‘void BALL::GAFFTypeProcessor::annotateBondTypes_()’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/MOLMEC/AMBER/GAFFTypeProcessor.C:289:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 289 | BALL_FOREACH_BOND(*current_molecule_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParser.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParser.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParser.C.o -c /<>/source/MOLMEC/AMBER/GAFFCESParser.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/MOLMEC/AMBER/GAFFCESParser.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/AMBER/GAFFCESParser.h:8, from /<>/source/MOLMEC/AMBER/GAFFCESParser.C:1: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/GAFFCESParser.C: In member function ‘bool BALL::GAFFCESParser::APSMatcher::hasBond_(BALL::Atom*, BALL::Atom*, int, int)’: /<>/source/MOLMEC/AMBER/GAFFCESParser.C:89:48: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 89 | for (bond_it = atom->beginBond(); +bond_it; ++bond_it) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/AMBER/GAFFCESParser.C: In member function ‘bool BALL::GAFFCESParser::APSMatcher::hasBond_(BALL::Atom*, BALL::Atom*, int, int)’: /<>/source/MOLMEC/AMBER/GAFFCESParser.C:89:48: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 89 | for (bond_it = atom->beginBond(); +bond_it; ++bond_it) | ^ [ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserParser.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserParser.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserParser.C.o -c /<>/build/source/MOLMEC/AMBER/GAFFCESParserParser.C [ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserLexer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserLexer.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserLexer.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/AMBER/GAFFCESParserLexer.C.o -c /<>/build/source/MOLMEC/AMBER/GAFFCESParserLexer.C /<>/build/source/MOLMEC/AMBER/GAFFCESParserLexer.C:1996:24: warning: ‘void yy_fatal_error(const char*)’ defined but not used [-Wunused-function] 1996 | static void yynoreturn yy_fatal_error (const char* msg ) | ^~~~~~~~~~~~~~ [ 31%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmm.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmm.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmm.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmm.C.o -c /<>/source/MOLMEC/CHARMM/charmm.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/CHARMM/charmm.h:15, from /<>/source/MOLMEC/CHARMM/charmm.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmm.C:10: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function ‘void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)’: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:63: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 105 | values[i] = v.values[i]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:25: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmBend.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmBend.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmBend.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmBend.C.o -c /<>/source/MOLMEC/CHARMM/charmmBend.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmBend.h:14, from /<>/source/MOLMEC/CHARMM/charmmBend.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmBend.C: In member function ‘virtual bool BALL::CharmmBend::setup()’: /<>/source/MOLMEC/CHARMM/charmmBend.C:83:58: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 83 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmBend.C: In member function ‘virtual bool BALL::CharmmBend::setup()’: /<>/source/MOLMEC/CHARMM/charmmBend.C:83:58: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 83 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ /<>/source/MOLMEC/CHARMM/charmmBend.C:86:44: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 86 | for (it1 = it2, ++it1; +it1 ; ++it1 ) | ^~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmImproperTorsion.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmImproperTorsion.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmImproperTorsion.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmImproperTorsion.C.o -c /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:23, from /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/quadraticImproperTorsion.h:12, from /<>/include/BALL/MOLMEC/CHARMM/charmmImproperTorsion.h:15: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C: In member function ‘virtual bool BALL::CharmmImproperTorsion::setup()’: /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:173:75: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 173 | for (atom_it = next_it->beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C: In member function ‘virtual bool BALL::CharmmImproperTorsion::setup()’: /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:173:75: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 173 | for (atom_it = next_it->beginAtom(); +atom_it; ++atom_it) | ^ /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:202:80: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 202 | for (atom_it = last_residue->beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:229:74: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 229 | for (atom_it = res_it->beginAtom(); (cys_res != 0) && +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmImproperTorsion.C:258:88: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | for (atom_it = last_residue->beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmNonBonded.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmNonBonded.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmNonBonded.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmNonBonded.C.o -c /<>/source/MOLMEC/CHARMM/charmmNonBonded.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:29, from /<>/source/MOLMEC/CHARMM/charmmNonBonded.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/CHARMM/charmmNonBonded.h:17: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmNonBonded.C: In member function ‘const BALL::CharmmNonBonded& BALL::CharmmNonBonded::operator=(const BALL::CharmmNonBonded&)’: /<>/source/MOLMEC/CHARMM/charmmNonBonded.C:137:49: warning: implicitly-declared ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ is deprecated [-Wdeprecated-copy] 137 | ForceFieldComponent::operator = (charmm_non_bonded); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:17: note: because ‘BALL::ForceFieldComponent’ has user-provided ‘BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)’ 61 | ForceFieldComponent(const ForceFieldComponent& force_field_component); | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h: In member function ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’: /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:34:27: warning: implicitly-declared ‘BALL::ScoringComponent& BALL::ScoringComponent::operator=(const BALL::ScoringComponent&)’ is deprecated [-Wdeprecated-copy] 34 | class BALL_EXPORT ForceFieldComponent : public ScoringComponent | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/SCORING/COMMON/scoringComponent.h:26:25: note: because ‘BALL::ScoringComponent’ has user-provided ‘BALL::ScoringComponent::ScoringComponent(const BALL::ScoringComponent&)’ 26 | ScoringComponent(const ScoringComponent& sc); | ^~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmNonBonded.C: In member function ‘const BALL::CharmmNonBonded& BALL::CharmmNonBonded::operator=(const BALL::CharmmNonBonded&)’: /<>/source/MOLMEC/CHARMM/charmmNonBonded.C:137:49: note: synthesized method ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ first required here 137 | ForceFieldComponent::operator = (charmm_non_bonded); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmStretch.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmStretch.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmStretch.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmStretch.C.o -c /<>/source/MOLMEC/CHARMM/charmmStretch.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/include/BALL/MOLMEC/CHARMM/charmmStretch.h:14, from /<>/source/MOLMEC/CHARMM/charmmStretch.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmStretch.C: In member function ‘virtual bool BALL::CharmmStretch::setup()’: /<>/source/MOLMEC/CHARMM/charmmStretch.C:71:68: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 71 | for (bond_iterator = (*atom_it)->beginBond(); +bond_iterator; ++bond_iterator) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmStretch.C: In member function ‘virtual bool BALL::CharmmStretch::setup()’: /<>/source/MOLMEC/CHARMM/charmmStretch.C:71:68: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 71 | for (bond_iterator = (*atom_it)->beginBond(); +bond_iterator; ++bond_iterator) | ^ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmTorsion.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmTorsion.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmTorsion.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/CHARMM/charmmTorsion.C.o -c /<>/source/MOLMEC/CHARMM/charmmTorsion.C In file included from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:15, from /<>/source/MOLMEC/CHARMM/charmmTorsion.C:5: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function ‘void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)’: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:63: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 105 | values[i] = v.values[i]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:25: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/CHARMM/charmmTorsion.h:23: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmTorsion.C: In member function ‘virtual bool BALL::CharmmTorsion::setup()’: /<>/source/MOLMEC/CHARMM/charmmTorsion.C:131:58: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 131 | for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:13: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmTorsion.C: In member function ‘virtual bool BALL::CharmmTorsion::setup()’: /<>/source/MOLMEC/CHARMM/charmmTorsion.C:131:58: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 131 | for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1) | ^ /<>/source/MOLMEC/CHARMM/charmmTorsion.C:140:74: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 140 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmTorsion.C:155:119: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 155 | for (it3 = const_cast(it1->getSecondAtom())->beginBond(); +it3 ; ++it3) | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmTorsion.C:198:139: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 198 | for (res_it = chain->beginResidue(); +res_it; last_res = &*res_it, ++res_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/CHARMM/charmmTorsion.C: In member function ‘virtual bool BALL::CharmmTorsion::setup()’: /<>/source/MOLMEC/CHARMM/charmmTorsion.C:198:139: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ first required here 198 | for (res_it = chain->beginResidue(); +res_it; last_res = &*res_it, ++res_it) | ^ /<>/source/MOLMEC/CHARMM/charmmTorsion.C:304:125: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 304 | tmp.values = values.values[j]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:25: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/assignTypes.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/assignTypes.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/assignTypes.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/assignTypes.C.o -c /<>/source/MOLMEC/COMMON/assignTypes.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/MOLMEC/COMMON/assignTypes.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/atomTypes.h:9, from /<>/include/BALL/MOLMEC/COMMON/assignTypes.h:17, from /<>/source/MOLMEC/COMMON/assignTypes.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/atomVector.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/atomVector.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/atomVector.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/atomVector.C.o -c /<>/source/MOLMEC/COMMON/atomVector.C [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/bendComponent.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/bendComponent.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/bendComponent.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/bendComponent.C.o -c /<>/source/MOLMEC/COMMON/bendComponent.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/bendComponent.h:14, from /<>/source/MOLMEC/COMMON/bendComponent.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/chargeRuleProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/chargeRuleProcessor.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/chargeRuleProcessor.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/chargeRuleProcessor.C.o -c /<>/source/MOLMEC/COMMON/chargeRuleProcessor.C [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceField.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceField.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceField.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceField.C.o -c /<>/source/MOLMEC/COMMON/forceField.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/COMMON/forceField.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/COMMON/forceField.C: In member function ‘void BALL::ForceField::collectAtoms_(const BALL::System&)’: /<>/source/MOLMEC/COMMON/forceField.C:326:57: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 326 | for (atom_it = system.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceFieldComponent.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceFieldComponent.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceFieldComponent.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/forceFieldComponent.C.o -c /<>/source/MOLMEC/COMMON/forceFieldComponent.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/source/MOLMEC/COMMON/forceFieldComponent.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/COMMON/forceFieldComponent.C: In copy constructor ‘BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)’: /<>/source/MOLMEC/COMMON/forceFieldComponent.C:34:9: warning: base class ‘class BALL::ScoringComponent’ should be explicitly initialized in the copy constructor [-Wextra] 34 | ForceFieldComponent::ForceFieldComponent(const ForceFieldComponent& force_field_component) | ^~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/gradient.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/gradient.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/gradient.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/gradient.C.o -c /<>/source/MOLMEC/COMMON/gradient.C [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/periodicBoundary.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/periodicBoundary.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/periodicBoundary.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/periodicBoundary.C.o -c /<>/source/MOLMEC/COMMON/periodicBoundary.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/COMMON/periodicBoundary.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/COMMON/periodicBoundary.h:15, from /<>/source/MOLMEC/COMMON/periodicBoundary.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/COMMON/support.h:28, from /<>/source/MOLMEC/COMMON/periodicBoundary.C:7: /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = const BALL::Atom*; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1667:20: required from ‘void BALL::HashGrid3::dump(std::ostream&, BALL::Size) const [with Item = const BALL::Atom*; std::ostream = std::basic_ostream; BALL::Size = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:1625:7: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/radiusRuleProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/radiusRuleProcessor.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/radiusRuleProcessor.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/radiusRuleProcessor.C.o -c /<>/source/MOLMEC/COMMON/radiusRuleProcessor.C [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleEvaluator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleEvaluator.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleEvaluator.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleEvaluator.C.o -c /<>/source/MOLMEC/COMMON/ruleEvaluator.C [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleProcessor.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleProcessor.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/ruleProcessor.C.o -c /<>/source/MOLMEC/COMMON/ruleProcessor.C [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShot.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShot.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShot.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShot.C.o -c /<>/source/MOLMEC/COMMON/snapShot.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/source/MOLMEC/COMMON/snapShot.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/source/MOLMEC/COMMON/snapShot.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShotManager.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShotManager.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShotManager.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/snapShotManager.C.o -c /<>/source/MOLMEC/COMMON/snapShotManager.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/COMMON/snapShotManager.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MOLMEC/COMMON/snapShot.h:16, from /<>/include/BALL/MOLMEC/COMMON/snapShotManager.h:11, from /<>/source/MOLMEC/COMMON/snapShotManager.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/KERNEL/PTE.h:15, from /<>/source/MOLMEC/COMMON/snapShotManager.C:7: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const BALL::SnapShot&}; _Tp = BALL::SnapShot; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {BALL::SnapShot}; _Tp = BALL::SnapShot; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::SnapShot; _Alloc = std::allocator]’, inlined from ‘bool BALL::SnapShotManager::readFromFile()’ at /<>/source/MOLMEC/COMMON/snapShotManager.C:613:30: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {BALL::SnapShot}; _Tp = BALL::SnapShot; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = BALL::SnapShot; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘virtual void BALL::SnapShotManager::takeSnapShot()’ at /<>/source/MOLMEC/COMMON/snapShotManager.C:396:29: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/support.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/support.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/support.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/support.C.o -c /<>/source/MOLMEC/COMMON/support.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:20, from /<>/source/MOLMEC/COMMON/support.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/COMMON/support.C: In function ‘BALL::Size BALL::MolmecSupport::addNonOverlappingMolecules(BALL::System&, const BALL::HashGrid3&, const BALL::System&, const BALL::SimpleBox3&, double)’: /<>/source/MOLMEC/COMMON/support.C:496:66: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 496 | for (atom_it = mol_it->beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/COMMON/support.C: In function ‘void BALL::MolmecSupport::adaptWaterBox(BALL::System&, const BALL::SimpleBox3&)’: /<>/source/MOLMEC/COMMON/support.C:652:61: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 652 | atom_it = mol_it->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/COMMON/support.C: In function ‘void BALL::MolmecSupport::adaptWaterBox(BALL::System&, const BALL::SimpleBox3&)’: /<>/source/MOLMEC/COMMON/support.C:652:61: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 652 | atom_it = mol_it->beginAtom(); | ^ /<>/source/MOLMEC/COMMON/support.C:701:74: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 701 | for (atom_it = mol_it->beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/COMMON/support.h:28: /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = BALL::Atom*; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::Atom*; BALL::Position = unsigned int]’ /<>/source/MOLMEC/COMMON/support.C:234:22: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/DATATYPE/hashSet.h:17, from /<>/include/BALL/CONCEPT/persistenceManager.h:21: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/source/MOLMEC/COMMON/support.C:450:36: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared ‘BALL::HashGridBox3::BoxIteratorTraits& BALL::HashGridBox3::BoxIteratorTraits::operator=(const BALL::HashGridBox3::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ /<>/include/BALL/DATATYPE/hashGrid.h:209:25: note: because ‘BALL::HashGridBox3::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = const BALL::Atom*]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = const BALL::Atom*; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = const BALL::Atom*; BALL::Position = unsigned int]’ /<>/source/MOLMEC/COMMON/support.C:503:29: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/stretchComponent.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/stretchComponent.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/stretchComponent.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/stretchComponent.C.o -c /<>/source/MOLMEC/COMMON/stretchComponent.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/COMMON/stretchComponent.h:14, from /<>/source/MOLMEC/COMMON/stretchComponent.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typenameRuleProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typenameRuleProcessor.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typenameRuleProcessor.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typenameRuleProcessor.C.o -c /<>/source/MOLMEC/COMMON/typenameRuleProcessor.C [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typeRuleProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typeRuleProcessor.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typeRuleProcessor.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/COMMON/typeRuleProcessor.C.o -c /<>/source/MOLMEC/COMMON/typeRuleProcessor.C [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/energyMinimizer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/energyMinimizer.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/energyMinimizer.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/energyMinimizer.C.o -c /<>/source/MOLMEC/MINIMIZATION/energyMinimizer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/energyMinimizer.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/source/MOLMEC/MINIMIZATION/energyMinimizer.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/lineSearch.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/lineSearch.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/lineSearch.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/lineSearch.C.o -c /<>/source/MOLMEC/MINIMIZATION/lineSearch.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/lineSearch.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/source/MOLMEC/MINIMIZATION/lineSearch.C:8: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/steepestDescent.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/steepestDescent.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/steepestDescent.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/steepestDescent.C.o -c /<>/source/MOLMEC/MINIMIZATION/steepestDescent.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/steepestDescent.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/steepestDescent.h:11, from /<>/source/MOLMEC/MINIMIZATION/steepestDescent.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/strangLBFGS.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/strangLBFGS.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/strangLBFGS.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/strangLBFGS.C.o -c /<>/source/MOLMEC/MINIMIZATION/strangLBFGS.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/strangLBFGS.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/strangLBFGS.h:11, from /<>/source/MOLMEC/MINIMIZATION/strangLBFGS.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/shiftedLVMM.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/shiftedLVMM.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/shiftedLVMM.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/shiftedLVMM.C.o -c /<>/source/MOLMEC/MINIMIZATION/shiftedLVMM.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/shiftedLVMM.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/shiftedLVMM.h:11, from /<>/source/MOLMEC/MINIMIZATION/shiftedLVMM.C:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/conjugateGradient.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/conjugateGradient.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/conjugateGradient.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MINIMIZATION/conjugateGradient.C.o -c /<>/source/MOLMEC/MINIMIZATION/conjugateGradient.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MINIMIZATION/conjugateGradient.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MINIMIZATION/energyMinimizer.h:13, from /<>/include/BALL/MOLMEC/MINIMIZATION/conjugateGradient.h:11, from /<>/source/MOLMEC/MINIMIZATION/conjugateGradient.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/molecularDynamics.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/molecularDynamics.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/molecularDynamics.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/molecularDynamics.C.o -c /<>/source/MOLMEC/MDSIMULATION/molecularDynamics.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MDSIMULATION/molecularDynamics.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18, from /<>/source/MOLMEC/MDSIMULATION/molecularDynamics.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/microCanonicalMD.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/microCanonicalMD.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/microCanonicalMD.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/microCanonicalMD.C.o -c /<>/source/MOLMEC/MDSIMULATION/microCanonicalMD.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18, from /<>/include/BALL/MOLMEC/MDSIMULATION/microCanonicalMD.h:11, from /<>/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:14: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const BALL::MicroCanonicalMD::AuxFactors&}; _Tp = BALL::MicroCanonicalMD::AuxFactors; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::MicroCanonicalMD::AuxFactors; _Alloc = std::allocator]’, inlined from ‘void BALL::MicroCanonicalMD::calculateFactors()’ at /<>/source/MOLMEC/MDSIMULATION/microCanonicalMD.C:119:26: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/canonicalMD.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/canonicalMD.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/canonicalMD.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MDSIMULATION/canonicalMD.C.o -c /<>/source/MOLMEC/MDSIMULATION/canonicalMD.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/source/MOLMEC/MDSIMULATION/canonicalMD.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/MOLMEC/MDSIMULATION/molecularDynamics.h:18, from /<>/include/BALL/MOLMEC/MDSIMULATION/canonicalMD.h:11, from /<>/source/MOLMEC/MDSIMULATION/canonicalMD.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94.C.o -c /<>/source/MOLMEC/MMFF94/MMFF94.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/MOLMEC/MMFF94/MMFF94.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/path.h:22, from /<>/source/MOLMEC/MMFF94/MMFF94.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94StretchBend.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94StretchBend.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94StretchBend.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94StretchBend.C.o -c /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94StretchBend.h:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C: In member function ‘bool BALL::MMFF94StretchBend::setupBends_()’: /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:189:58: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 189 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C: In member function ‘bool BALL::MMFF94StretchBend::setupBends_()’: /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:189:58: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 189 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:193:44: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 193 | for (it1 = it2, ++it1; +it1 ; ++it1) | ^~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const BALL::MMFF94StretchBend::Bend&}; _Tp = BALL::MMFF94StretchBend::Bend; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const BALL::MMFF94StretchBend::Stretch&}; _Tp = BALL::MMFF94StretchBend::Stretch; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const BALL::MMFF94StretchBend::StretchBend&}; _Tp = BALL::MMFF94StretchBend::StretchBend; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::MMFF94StretchBend::Bend; _Alloc = std::allocator]’, inlined from ‘bool BALL::MMFF94StretchBend::setupBends_()’ at /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:256:23: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::MMFF94StretchBend::Bend; _Alloc = std::allocator]’, inlined from ‘bool BALL::MMFF94StretchBend::setupBends_()’ at /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:244:24: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::MMFF94StretchBend::Bend; _Alloc = std::allocator]’, inlined from ‘bool BALL::MMFF94StretchBend::setupBends_()’ at /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:256:23: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::MMFF94StretchBend::Stretch; _Alloc = std::allocator]’, inlined from ‘bool BALL::MMFF94StretchBend::setupStretches_()’ at /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:316:25: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::MMFF94StretchBend::Stretch; _Alloc = std::allocator]’, inlined from ‘bool BALL::MMFF94StretchBend::setupStretches_()’ at /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:331:25: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::MMFF94StretchBend::StretchBend; _Alloc = std::allocator]’, inlined from ‘bool BALL::MMFF94StretchBend::setupStretchBends_()’ at /<>/source/MOLMEC/MMFF94/MMFF94StretchBend.C:419:28: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Torsion.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Torsion.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Torsion.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Torsion.C.o -c /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Torsion.h:19: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C: In member function ‘virtual bool BALL::MMFF94Torsion::setup()’: /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:144:58: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 144 | for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C: In member function ‘virtual bool BALL::MMFF94Torsion::setup()’: /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:144:58: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 144 | for (it1 = (*atom_it)->beginBond(); +it1 ; ++ it1) | ^ /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:153:66: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 153 | for (it2 = (*atom_it)->beginBond(); +it2 ; ++it2) | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:163:69: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 163 | for (it3 = atom3->beginBond(); +it3 ; ++it3) | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const BALL::MMFF94Torsion::Torsion&}; _Tp = BALL::MMFF94Torsion::Torsion; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::MMFF94Torsion::Torsion; _Alloc = std::allocator]’, inlined from ‘virtual bool BALL::MMFF94Torsion::setup()’ at /<>/source/MOLMEC/MMFF94/MMFF94Torsion.C:268:26: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Parameters.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Parameters.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Parameters.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Parameters.C.o -c /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:17, from /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘virtual bool BALL::MMFF94TorsionParameters::setup_(const std::vector >&)’ at /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:812:32: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘virtual bool BALL::MMFF94TorsionParameters::setup_(const std::vector >&)’ at /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:813:32: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘virtual bool BALL::MMFF94TorsionParameters::setup_(const std::vector >&)’ at /<>/source/MOLMEC/MMFF94/MMFF94Parameters.C:814:32: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C.o -c /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.h:19: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C: In member function ‘virtual bool BALL::MMFF94OutOfPlaneBend::setup()’: /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:130:62: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 130 | for (bond_it = (*atom_it)->beginBond(); +bond_it; ++bond_it) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C: In member function ‘virtual bool BALL::MMFF94OutOfPlaneBend::setup()’: /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:130:62: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 130 | for (bond_it = (*atom_it)->beginBond(); +bond_it; ++bond_it) | ^ /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:140:63: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 140 | for (bond_it = central_atom.beginBond(); +bond_it; ++bond_it) | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const BALL::MMFF94OutOfPlaneBend::OutOfPlaneBend&}; _Tp = BALL::MMFF94OutOfPlaneBend::OutOfPlaneBend; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::MMFF94OutOfPlaneBend::OutOfPlaneBend; _Alloc = std::allocator]’, inlined from ‘virtual bool BALL::MMFF94OutOfPlaneBend::setup()’ at /<>/source/MOLMEC/MMFF94/MMFF94OutOfPlaneBend.C:187:48: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Processors.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Processors.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Processors.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94Processors.C.o -c /<>/source/MOLMEC/MMFF94/MMFF94Processors.C In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:13, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:7: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94Processors.h:23: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94Processors.C: In member function ‘virtual void BALL::MMFF94AtomTyper::assignTo(BALL::System&)’: /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:439:27: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 439 | ait = s.beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94Processors.C: In member function ‘virtual void BALL::MMFF94AtomTyper::assignTo(BALL::System&)’: /<>/source/MOLMEC/MMFF94/MMFF94Processors.C:439:27: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 439 | ait = s.beginAtom(); | ^ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94NonBonded.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94NonBonded.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94NonBonded.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/MMFF94/MMFF94NonBonded.C.o -c /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:11, from /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94NonBonded.h:19: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C: In member function ‘const BALL::MMFF94NonBonded& BALL::MMFF94NonBonded::operator=(const BALL::MMFF94NonBonded&)’: /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:103:49: warning: implicitly-declared ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ is deprecated [-Wdeprecated-copy] 103 | ForceFieldComponent::operator = (anb); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:17: note: because ‘BALL::ForceFieldComponent’ has user-provided ‘BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)’ 61 | ForceFieldComponent(const ForceFieldComponent& force_field_component); | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h: In member function ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’: /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:34:27: warning: implicitly-declared ‘BALL::ScoringComponent& BALL::ScoringComponent::operator=(const BALL::ScoringComponent&)’ is deprecated [-Wdeprecated-copy] 34 | class BALL_EXPORT ForceFieldComponent : public ScoringComponent | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/SCORING/COMMON/scoringComponent.h:26:25: note: because ‘BALL::ScoringComponent’ has user-provided ‘BALL::ScoringComponent::ScoringComponent(const BALL::ScoringComponent&)’ 26 | ScoringComponent(const ScoringComponent& sc); | ^~~~~~~~~~~~~~~~ /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C: In member function ‘const BALL::MMFF94NonBonded& BALL::MMFF94NonBonded::operator=(const BALL::MMFF94NonBonded&)’: /<>/source/MOLMEC/MMFF94/MMFF94NonBonded.C:103:49: note: synthesized method ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ first required here 103 | ForceFieldComponent::operator = (anb); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/atomTypes.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/atomTypes.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/atomTypes.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/atomTypes.C.o -c /<>/source/MOLMEC/PARAMETER/atomTypes.C [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/charmmEEF1.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/charmmEEF1.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/charmmEEF1.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/charmmEEF1.C.o -c /<>/source/MOLMEC/PARAMETER/charmmEEF1.C [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/cosineTorsion.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/cosineTorsion.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/cosineTorsion.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/cosineTorsion.C.o -c /<>/source/MOLMEC/PARAMETER/cosineTorsion.C In file included from /<>/source/MOLMEC/PARAMETER/cosineTorsion.C:5: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h: In member function ‘void BALL::CosineTorsion::Values::set(const BALL::CosineTorsion::Values&)’: /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:105:63: warning: implicitly-declared ‘BALL::CosineTorsion::SingleValues& BALL::CosineTorsion::SingleValues::operator=(const BALL::CosineTorsion::SingleValues&)’ is deprecated [-Wdeprecated-copy] 105 | values[i] = v.values[i]; | ^ /<>/include/BALL/MOLMEC/PARAMETER/cosineTorsion.h:42:25: note: because ‘BALL::CosineTorsion::SingleValues’ has user-provided ‘BALL::CosineTorsion::SingleValues::SingleValues(const BALL::CosineTorsion::SingleValues&)’ 42 | SingleValues(const SingleValues& v) | ^~~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/forceFieldParameters.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/forceFieldParameters.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/forceFieldParameters.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/forceFieldParameters.C.o -c /<>/source/MOLMEC/PARAMETER/forceFieldParameters.C [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/lennardJones.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/lennardJones.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/lennardJones.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/lennardJones.C.o -c /<>/source/MOLMEC/PARAMETER/lennardJones.C [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/potential1210.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/potential1210.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/potential1210.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/potential1210.C.o -c /<>/source/MOLMEC/PARAMETER/potential1210.C [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticAngleBend.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticAngleBend.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticAngleBend.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticAngleBend.C.o -c /<>/source/MOLMEC/PARAMETER/quadraticAngleBend.C [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticBondStretch.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticBondStretch.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticBondStretch.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticBondStretch.C.o -c /<>/source/MOLMEC/PARAMETER/quadraticBondStretch.C [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticImproperTorsion.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticImproperTorsion.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticImproperTorsion.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/quadraticImproperTorsion.C.o -c /<>/source/MOLMEC/PARAMETER/quadraticImproperTorsion.C [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/residueTorsions.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/residueTorsions.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/residueTorsions.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/residueTorsions.C.o -c /<>/source/MOLMEC/PARAMETER/residueTorsions.C [ 43%] Building CXX object CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/templates.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/templates.C.o -MF CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/templates.C.o.d -o CMakeFiles/BALL.dir/source/MOLMEC/PARAMETER/templates.C.o -c /<>/source/MOLMEC/PARAMETER/templates.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/PARAMETER/templates.h:15, from /<>/source/MOLMEC/PARAMETER/templates.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/templates.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/NMR/anisotropyShiftProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/anisotropyShiftProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/anisotropyShiftProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/anisotropyShiftProcessor.C.o -c /<>/source/NMR/anisotropyShiftProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/NMR/anisotropyShiftProcessor.h:11, from /<>/source/NMR/anisotropyShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/NMR/clearShiftProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/clearShiftProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/clearShiftProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/clearShiftProcessor.C.o -c /<>/source/NMR/clearShiftProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/clearShiftProcessor.h:11, from /<>/source/NMR/clearShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/NMR/EFShiftProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/EFShiftProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/EFShiftProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/EFShiftProcessor.C.o -c /<>/source/NMR/EFShiftProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/EFShiftProcessor.h:11, from /<>/source/NMR/EFShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/NMR/empiricalHSShiftProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/empiricalHSShiftProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/empiricalHSShiftProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/empiricalHSShiftProcessor.C.o -c /<>/source/NMR/empiricalHSShiftProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/NMR/empiricalHSShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/NMR/empiricalHSShiftProcessor.C:6: /<>/include/BALL/NMR/empiricalHSShiftProcessor.h: In member function ‘BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_& BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_::operator=(const BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_&)’: /<>/include/BALL/NMR/empiricalHSShiftProcessor.h:282:23: warning: implicitly-declared ‘BALL::CubicSpline2D& BALL::CubicSpline2D::operator=(const BALL::CubicSpline2D&)’ is deprecated [-Wdeprecated-copy] 282 | class ShiftHyperSurface_ | ^~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/NMR/empiricalHSShiftProcessor.h:5: /<>/include/BALL/MATHS/cubicSpline2D.h:163:25: note: because ‘BALL::CubicSpline2D’ has user-provided ‘BALL::CubicSpline2D::CubicSpline2D(const BALL::CubicSpline2D&)’ 163 | CubicSpline2D(const CubicSpline2D& cs2D); | ^~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C: In member function ‘virtual void BALL::EmpiricalHSShiftProcessor::init()’: /<>/source/NMR/empiricalHSShiftProcessor.C:205:75: note: synthesized method ‘BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_& BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_::operator=(const BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_&)’ first required here 205 | hypersurfaces_[atom_type][tuple]= shs; | ^~~ /<>/source/NMR/empiricalHSShiftProcessor.C: In member function ‘float BALL::EmpiricalHSShiftProcessor::PropertiesForShift_::getChiAngle_(BALL::Residue*)’: /<>/source/NMR/empiricalHSShiftProcessor.C:475:51: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 475 | r_it = residue->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C: In member function ‘float BALL::EmpiricalHSShiftProcessor::PropertiesForShift_::getChiAngle_(BALL::Residue*)’: /<>/source/NMR/empiricalHSShiftProcessor.C:475:51: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 475 | r_it = residue->beginAtom(); | ^ /<>/source/NMR/empiricalHSShiftProcessor.C:488:51: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 488 | r_it = residue->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:506:51: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 506 | r_it = residue->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:519:51: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 519 | r_it = residue->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:532:51: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 532 | r_it = residue->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:545:51: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 545 | r_it = residue->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C: In member function ‘float BALL::EmpiricalHSShiftProcessor::PropertiesForShift_::getChi2Angle_(BALL::Residue*)’: /<>/source/NMR/empiricalHSShiftProcessor.C:654:51: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 654 | r_it = residue->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:667:51: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 667 | r_it = residue->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:681:51: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 681 | r_it = residue->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:694:51: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 694 | r_it = residue->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:707:51: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 707 | r_it = residue->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:721:51: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 721 | r_it = residue->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:738:51: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 738 | r_it = residue->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:755:51: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 755 | r_it = residue->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C: In constructor ‘BALL::EmpiricalHSShiftProcessor::ShiftHyperSurface_::ShiftHyperSurface_(BALL::String, BALL::String, BALL::String, BALL::String, int)’: /<>/source/NMR/empiricalHSShiftProcessor.C:1641:49: warning: implicitly-declared ‘BALL::CubicSpline1D& BALL::CubicSpline1D::operator=(const BALL::CubicSpline1D&)’ is deprecated [-Wdeprecated-copy] 1641 | s1d_[first_property_] = s; | ^ In file included from /<>/include/BALL/MATHS/cubicSpline2D.h:8: /<>/include/BALL/MATHS/cubicSpline1D.h:124:25: note: because ‘BALL::CubicSpline1D’ has user-provided ‘BALL::CubicSpline1D::CubicSpline1D(const BALL::CubicSpline1D&)’ 124 | CubicSpline1D(const CubicSpline1D& cs1D); | ^~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:1679:84: warning: implicitly-declared ‘BALL::CubicSpline2D& BALL::CubicSpline2D::operator=(const BALL::CubicSpline2D&)’ is deprecated [-Wdeprecated-copy] 1679 | s2d_ = CubicSpline2D(x_axis, y_axis, sample_values_); | ^ /<>/include/BALL/MATHS/cubicSpline2D.h:163:25: note: because ‘BALL::CubicSpline2D’ has user-provided ‘BALL::CubicSpline2D::CubicSpline2D(const BALL::CubicSpline2D&)’ 163 | CubicSpline2D(const CubicSpline2D& cs2D); | ^~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:1732:67: warning: implicitly-declared ‘BALL::CubicSpline1D& BALL::CubicSpline1D::operator=(const BALL::CubicSpline1D&)’ is deprecated [-Wdeprecated-copy] 1732 | s1d_[y_axis_values_[i]] = s; | ^ /<>/include/BALL/MATHS/cubicSpline1D.h:124:25: note: because ‘BALL::CubicSpline1D’ has user-provided ‘BALL::CubicSpline1D::CubicSpline1D(const BALL::CubicSpline1D&)’ 124 | CubicSpline1D(const CubicSpline1D& cs1D); | ^~~~~~~~~~~~~ /<>/source/NMR/empiricalHSShiftProcessor.C:1760:67: warning: implicitly-declared ‘BALL::CubicSpline1D& BALL::CubicSpline1D::operator=(const BALL::CubicSpline1D&)’ is deprecated [-Wdeprecated-copy] 1760 | s1d_[y_axis_values_[i]] = s; | ^ /<>/include/BALL/MATHS/cubicSpline1D.h:124:25: note: because ‘BALL::CubicSpline1D’ has user-provided ‘BALL::CubicSpline1D::CubicSpline1D(const BALL::CubicSpline1D&)’ 124 | CubicSpline1D(const CubicSpline1D& cs1D); | ^~~~~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/BALL.dir/source/NMR/experiment.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/experiment.C.o -MF CMakeFiles/BALL.dir/source/NMR/experiment.C.o.d -o CMakeFiles/BALL.dir/source/NMR/experiment.C.o -c /<>/source/NMR/experiment.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/experiment.h:15, from /<>/source/NMR/experiment.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/NMR/peak.h:11, from /<>/include/BALL/NMR/peakList.h:11, from /<>/include/BALL/NMR/experiment.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/HBondShiftProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/HBondShiftProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/HBondShiftProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/HBondShiftProcessor.C.o -c /<>/source/NMR/HBondShiftProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/NMR/HBondShiftProcessor.h:15, from /<>/source/NMR/HBondShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/HBondShiftProcessor.C: In member function ‘virtual bool BALL::HBondShiftProcessor::finish()’: /<>/source/NMR/HBondShiftProcessor.C:234:84: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 234 | for (bi = acceptors_[a]->beginBond(); +bi; ++bi) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/NMR/HBondShiftProcessor.C: In member function ‘virtual bool BALL::HBondShiftProcessor::finish()’: /<>/source/NMR/HBondShiftProcessor.C:234:84: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 234 | for (bi = acceptors_[a]->beginBond(); +bi; ++bi) | ^ /<>/source/NMR/HBondShiftProcessor.C:242:81: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 242 | for (bi = donors_[d]->beginBond(); +bi; ++bi) | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/haighMallionShiftProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/haighMallionShiftProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/haighMallionShiftProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/haighMallionShiftProcessor.C.o -c /<>/source/NMR/haighMallionShiftProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/haighMallionShiftProcessor.h:16, from /<>/source/NMR/haighMallionShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/createSpectrumProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/createSpectrumProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/createSpectrumProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/createSpectrumProcessor.C.o -c /<>/source/NMR/createSpectrumProcessor.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/createSpectrumProcessor.h:35, from /<>/source/NMR/createSpectrumProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/NMR/peak.h:11, from /<>/include/BALL/NMR/createSpectrumProcessor.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/peak.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/peak.C.o -MF CMakeFiles/BALL.dir/source/NMR/peak.C.o.d -o CMakeFiles/BALL.dir/source/NMR/peak.C.o -c /<>/source/NMR/peak.C [ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/peakList.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/peakList.C.o -MF CMakeFiles/BALL.dir/source/NMR/peakList.C.o.d -o CMakeFiles/BALL.dir/source/NMR/peakList.C.o -c /<>/source/NMR/peakList.C [ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/shiftModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/shiftModel.C.o -MF CMakeFiles/BALL.dir/source/NMR/shiftModel.C.o.d -o CMakeFiles/BALL.dir/source/NMR/shiftModel.C.o -c /<>/source/NMR/shiftModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/shiftModel.h:11, from /<>/source/NMR/shiftModel.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/shiftModule.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/shiftModule.C.o -MF CMakeFiles/BALL.dir/source/NMR/shiftModule.C.o.d -o CMakeFiles/BALL.dir/source/NMR/shiftModule.C.o -c /<>/source/NMR/shiftModule.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/source/NMR/shiftModule.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/spectrum.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/spectrum.C.o -MF CMakeFiles/BALL.dir/source/NMR/spectrum.C.o.d -o CMakeFiles/BALL.dir/source/NMR/spectrum.C.o -c /<>/source/NMR/spectrum.C In file included from /<>/include/BALL/NMR/spectrum.h:335, from /<>/source/NMR/spectrum.C:5: /<>/include/BALL/NMR/spectrum.iC: In constructor ‘BALL::Spectrum::Spectrum(const std::vector&, const PositionType&, const PositionType&, const PositionType&) [with DataT = BALL::TRegularData1D; PeakT = BALL::Peak; PositionT = float; PositionType = float]’: /<>/include/BALL/NMR/spectrum.iC:20:45: warning: catching polymorphic type ‘class BALL::Exception::OutOfGrid’ by value [-Wcatch-value=] 20 | catch (Exception::OutOfGrid e) | ^ /<>/include/BALL/NMR/spectrum.iC: In constructor ‘BALL::Spectrum::Spectrum(const std::vector&, const PositionType&, const PositionType&, const PositionType&) [with DataT = BALL::TRegularData2D; PeakT = BALL::Peak >; PositionT = BALL::TVector2; PositionType = BALL::TVector2]’: /<>/include/BALL/NMR/spectrum.iC:46:45: warning: catching polymorphic type ‘class BALL::Exception::OutOfGrid’ by value [-Wcatch-value=] 46 | catch (Exception::OutOfGrid e) | ^ /<>/include/BALL/NMR/spectrum.iC: In member function ‘double BALL::Spectrum::difference(const BALL::Spectrum&) const [with DataT = BALL::TRegularData1D; PeakT = BALL::Peak; PositionT = float]’: /<>/include/BALL/NMR/spectrum.iC:135:53: warning: catching polymorphic type ‘class BALL::Exception::OutOfGrid’ by value [-Wcatch-value=] 135 | catch (Exception::OutOfGrid e) | ^ /<>/include/BALL/NMR/spectrum.iC: In member function ‘double BALL::Spectrum::difference(const BALL::Spectrum&) const [with DataT = BALL::TRegularData2D; PeakT = BALL::Peak >; PositionT = BALL::TVector2]’: /<>/include/BALL/NMR/spectrum.iC:177:53: warning: catching polymorphic type ‘class BALL::Exception::OutOfGrid’ by value [-Wcatch-value=] 177 | catch (Exception::OutOfGrid e) | ^ /<>/include/BALL/NMR/spectrum.iC: In member function ‘double BALL::Spectrum::getFourierDifference(const BALL::Spectrum&, float, float) [with DataT = BALL::TRegularData1D; PeakT = BALL::Peak; PositionT = float]’: /<>/include/BALL/NMR/spectrum.iC:752:101: warning: unused parameter ‘other_spectrum’ [-Wunused-parameter] 752 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/include/BALL/NMR/spectrum.iC:752:123: warning: unused parameter ‘min_freq’ [-Wunused-parameter] 752 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~^~~~~~~~ /<>/include/BALL/NMR/spectrum.iC:752:139: warning: unused parameter ‘max_freq’ [-Wunused-parameter] 752 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~^~~~~~~~ /<>/include/BALL/NMR/spectrum.iC: In member function ‘double BALL::Spectrum::getFourierDifference(const BALL::Spectrum&, float, float) [with DataT = BALL::TRegularData2D; PeakT = BALL::Peak >; PositionT = BALL::TVector2]’: /<>/include/BALL/NMR/spectrum.iC:827:101: warning: unused parameter ‘other_spectrum’ [-Wunused-parameter] 827 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /<>/include/BALL/NMR/spectrum.iC:827:123: warning: unused parameter ‘min_freq’ [-Wunused-parameter] 827 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~^~~~~~~~ /<>/include/BALL/NMR/spectrum.iC:827:139: warning: unused parameter ‘max_freq’ [-Wunused-parameter] 827 | double Spectrum::getFourierDifference(const Spectrum& other_spectrum, float min_freq, float max_freq) | ~~~~~~^~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/johnsonBoveyShiftProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/johnsonBoveyShiftProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/johnsonBoveyShiftProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/johnsonBoveyShiftProcessor.C.o -c /<>/source/NMR/johnsonBoveyShiftProcessor.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/johnsonBoveyShiftProcessor.h:16, from /<>/source/NMR/johnsonBoveyShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/NMR/johnsonBoveyShiftProcessor.h:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/NMR/randomCoilShiftProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/NMR/randomCoilShiftProcessor.C.o -MF CMakeFiles/BALL.dir/source/NMR/randomCoilShiftProcessor.C.o.d -o CMakeFiles/BALL.dir/source/NMR/randomCoilShiftProcessor.C.o -c /<>/source/NMR/randomCoilShiftProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/NMR/shiftModule.h:11, from /<>/include/BALL/NMR/randomCoilShiftProcessor.h:8, from /<>/source/NMR/randomCoilShiftProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/PLUGIN/BALLPlugin.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/PLUGIN/BALLPlugin.C.o -MF CMakeFiles/BALL.dir/source/PLUGIN/BALLPlugin.C.o.d -o CMakeFiles/BALL.dir/source/PLUGIN/BALLPlugin.C.o -c /<>/source/PLUGIN/BALLPlugin.C [ 50%] Building CXX object CMakeFiles/BALL.dir/source/PLUGIN/pluginManager.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/PLUGIN/pluginManager.C.o -MF CMakeFiles/BALL.dir/source/PLUGIN/pluginManager.C.o.d -o CMakeFiles/BALL.dir/source/PLUGIN/pluginManager.C.o -c /<>/source/PLUGIN/pluginManager.C [ 50%] Building CXX object CMakeFiles/BALL.dir/source/PLUGIN/pluginHandler.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/PLUGIN/pluginHandler.C.o -MF CMakeFiles/BALL.dir/source/PLUGIN/pluginHandler.C.o.d -o CMakeFiles/BALL.dir/source/PLUGIN/pluginHandler.C.o -c /<>/source/PLUGIN/pluginHandler.C [ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/aromaticityProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/aromaticityProcessor.C.o -MF CMakeFiles/BALL.dir/source/QSAR/aromaticityProcessor.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/aromaticityProcessor.C.o -c /<>/source/QSAR/aromaticityProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/source/QSAR/aromaticityProcessor.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/aromaticityProcessor.C:10: /<>/source/QSAR/aromaticityProcessor.C: In member function ‘void BALL::AromaticityProcessor::aromatize(const std::vector >&, BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/aromaticityProcessor.C:660:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 660 | BALL_FOREACH_BOND(ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/aromaticityProcessor.C: In member function ‘void BALL::AromaticityProcessor::aromatize(const std::vector >&, BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/aromaticityProcessor.C:660:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 660 | BALL_FOREACH_BOND(ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/aromaticityProcessor.C:660:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 660 | BALL_FOREACH_BOND(ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/aromaticityProcessor.C: In member function ‘void BALL::AromaticityProcessor::aromatize(const std::vector >&, BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/aromaticityProcessor.C:660:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 660 | BALL_FOREACH_BOND(ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/source/QSAR/aromaticityProcessor.C: In member function ‘bool BALL::AromaticityProcessor::hasConjugatedDoubleBonds_(BALL::HashSet)’: /<>/source/QSAR/aromaticityProcessor.C:956:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 956 | bond_it = it; | ^~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/aromaticityProcessor.C: In member function ‘BALL::Size BALL::AromaticityProcessor::countPiElectrons_(BALL::HashSet&)’: /<>/source/QSAR/aromaticityProcessor.C:1008:64: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 1008 | for (j=(*i)->beginBond();j!=(*i)->endBond();++j) | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/aromaticityProcessor.C:1051:64: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 1051 | for (j=(*i)->beginBond();j!=(*i)->endBond();++j) | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/automaticModelCreator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/automaticModelCreator.C.o -MF CMakeFiles/BALL.dir/source/QSAR/automaticModelCreator.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/automaticModelCreator.C.o -c /<>/source/QSAR/automaticModelCreator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/automaticModelCreator.h:2, from /<>/source/QSAR/automaticModelCreator.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/featureSelection.h:13, from /<>/source/QSAR/automaticModelCreator.C:3: /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/nonlinearModel.h:19:35: note: by ‘BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)’ 19 | class BALL_EXPORT NonLinearModel : public RegressionModel | ^~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/kernelModel.h:14: /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:27:35: note: by ‘BALL::QSAR::KernelModel::operator=’ 27 | class BALL_EXPORT KernelModel : public NonLinearModel | ^~~~~~~~~~~ /<>/source/QSAR/automaticModelCreator.C: In member function ‘void BALL::QSAR::AutomaticModelCreator::optimizeParameters(BALL::QSAR::Model*)’: /<>/source/QSAR/automaticModelCreator.C:35:46: warning: catching polymorphic type ‘class BALL::QSAR::Exception::SingularMatrixError’ by value [-Wcatch-value=] 35 | catch(Exception::SingularMatrixError e) | ^ /<>/source/QSAR/automaticModelCreator.C: In member function ‘BALL::QSAR::Model* BALL::QSAR::AutomaticModelCreator::generateModel()’: /<>/source/QSAR/automaticModelCreator.C:80:57: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 80 | catch(BALL::Exception::GeneralException e) | ^ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/composite.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Model* BALL::QSAR::AutomaticModelCreator::generateModel()’ at /<>/source/QSAR/automaticModelCreator.C:134:24: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/bayesModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/bayesModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/bayesModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/bayesModel.C.o -c /<>/source/QSAR/bayesModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/source/QSAR/bayesModel.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: note: by ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: warning: ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ was hidden [-Woverloaded-virtual=] /<>/include/BALL/QSAR/bayesModel.h:18:35: note: by ‘BALL::QSAR::BayesModel::operator=’ 18 | class BALL_EXPORT BayesModel : public ClassificationModel | ^~~~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/classificationModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/classificationModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/classificationModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/classificationModel.C.o -c /<>/source/QSAR/classificationModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/source/QSAR/classificationModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: note: by ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/classificationValidation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/classificationValidation.C.o -MF CMakeFiles/BALL.dir/source/QSAR/classificationValidation.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/classificationValidation.C.o -c /<>/source/QSAR/classificationValidation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/classificationValidation.h:10, from /<>/source/QSAR/classificationValidation.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/source/QSAR/classificationValidation.C:7: /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: note: by ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/configIO.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/configIO.C.o -MF CMakeFiles/BALL.dir/source/QSAR/configIO.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/configIO.C.o -c /<>/source/QSAR/configIO.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/QSAR/configIO.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/QSAR/configIO.h:9, from /<>/source/QSAR/configIO.C:1: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘static BALL::QSAR::ModelConfiguration BALL::QSAR::ConfigIO::readModelConfiguration(std::istream*)’ at /<>/source/QSAR/configIO.C:337:38: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/connectivityBase.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/connectivityBase.C.o -MF CMakeFiles/BALL.dir/source/QSAR/connectivityBase.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/connectivityBase.C.o -c /<>/source/QSAR/connectivityBase.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/source/QSAR/connectivityBase.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/source/QSAR/connectivityBase.C:7: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ /<>/source/QSAR/connectivityBase.C: In member function ‘virtual void BALL::ConnectivityBase::calculate_(BALL::AtomContainer&)’: /<>/source/QSAR/connectivityBase.C:109:45: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 109 | for (atom_it = ac.beginAtom(); atom_it != ac.endAtom(); ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/connectivityBase.C:121:45: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 121 | for (atom_it = ac.beginAtom(); atom_it != ac.endAtom(); ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/connectivityBase.C:135:40: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 135 | atom_it = ac.beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/connectivityBase.C:136:46: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 136 | bond_it = atom_it->beginBond(); | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/connectivityBase.C: In member function ‘virtual void BALL::ConnectivityBase::calculate_(BALL::AtomContainer&)’: /<>/source/QSAR/connectivityBase.C:136:46: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 136 | bond_it = atom_it->beginBond(); | ^ In file included from /<>/source/QSAR/connectivityBase.C:9: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/connectivityBase.C:138:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 138 | BALL_FOREACH_BOND (ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/connectivityBase.C:138:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 138 | BALL_FOREACH_BOND (ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/connectivityBase.C: In member function ‘void BALL::ConnectivityBase::recursion_(std::vector&, const BALL::Atom*, BALL::HashMap&)’: /<>/source/QSAR/connectivityBase.C:195:60: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 195 | for (bond_it = min_atom->beginBond(); bond_it != min_atom->endBond(); ++bond_it) | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/processor.h:9, from /<>/include/BALL/QSAR/descriptor.h:10: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector, std::allocator > >::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::pair; _Alloc = std::allocator >]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(value_type&&) [with _Tp = std::pair; _Sequence = std::vector, std::allocator > >; _Compare = std::less >]’ at /usr/include/c++/13/bits/stl_queue.h:748:13, inlined from ‘void BALL::ConnectivityBase::recursion_(std::vector&, const BALL::Atom*, BALL::HashMap&)’ at /<>/source/QSAR/connectivityBase.C:180:17: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair}; _Tp = std::pair; _Alloc = std::allocator >]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::pair; _Alloc = std::allocator >]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘void std::priority_queue<_Tp, _Sequence, _Compare>::push(value_type&&) [with _Tp = std::pair; _Sequence = std::vector, std::allocator > >; _Compare = std::less >]’ at /usr/include/c++/13/bits/stl_queue.h:748:13, inlined from ‘void BALL::ConnectivityBase::recursion_(std::vector&, const BALL::Atom*, BALL::HashMap&)’ at /<>/source/QSAR/connectivityBase.C:205:19: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/connectivityDescriptors.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/connectivityDescriptors.C.o -MF CMakeFiles/BALL.dir/source/QSAR/connectivityDescriptors.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/connectivityDescriptors.C.o -c /<>/source/QSAR/connectivityDescriptors.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/connectivityBase.h:14, from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/source/QSAR/connectivityDescriptors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h: At global scope: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ In file included from /<>/source/QSAR/connectivityDescriptors.C:8: /<>/source/QSAR/connectivityDescriptors.C: In member function ‘virtual double BALL::ZagrebIndex::compute(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/connectivityDescriptors.C:50:17: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 50 | BALL_FOREACH_ATOM (ac, atom_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/connectivityDescriptors.C:56:67: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 56 | for (bond_it = atom_it->beginBond(); bond_it != atom_it->endBond(); bond_it++) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/connectivityDescriptors.C: In member function ‘virtual double BALL::ZagrebIndex::compute(BALL::AtomContainer&)’: /<>/source/QSAR/connectivityDescriptors.C:56:67: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 56 | for (bond_it = atom_it->beginBond(); bond_it != atom_it->endBond(); bond_it++) | ^ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/descriptor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/descriptor.C.o -MF CMakeFiles/BALL.dir/source/QSAR/descriptor.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/descriptor.C.o -c /<>/source/QSAR/descriptor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/source/QSAR/descriptor.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/exception.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/exception.C.o -MF CMakeFiles/BALL.dir/source/QSAR/exception.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/exception.C.o -c /<>/source/QSAR/exception.C [ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/kernel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/kernel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/kernel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/kernel.C.o -c /<>/source/QSAR/kernel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/kernel.h:10, from /<>/source/QSAR/kernel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/kernelModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/kernelModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/kernelModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/kernelModel.C.o -c /<>/source/QSAR/kernelModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/source/QSAR/kernelModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/nonlinearModel.h:19:35: note: by ‘BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)’ 19 | class BALL_EXPORT NonLinearModel : public RegressionModel | ^~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/kernelModel.h:14: /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:27:35: note: by ‘BALL::QSAR::KernelModel::operator=’ 27 | class BALL_EXPORT KernelModel : public NonLinearModel | ^~~~~~~~~~~ /<>/source/QSAR/kernelModel.C: In member function ‘virtual void BALL::QSAR::KernelModel::calculateOffsets()’: /<>/source/QSAR/kernelModel.C:60:29: warning: unused variable ‘no_act’ [-Wunused-variable] 60 | int no_act = training_result_.cols(); | ^~~~~~ /<>/source/QSAR/kernelModel.C: In member function ‘virtual void BALL::QSAR::KernelModel::saveToFile(std::string)’: /<>/source/QSAR/kernelModel.C:99:30: warning: variable ‘sterr’ set but not used [-Wunused-but-set-variable] 99 | bool sterr = 0; | ^~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/latentVariableModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/latentVariableModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/latentVariableModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/latentVariableModel.C.o -c /<>/source/QSAR/latentVariableModel.C [ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/linearModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/linearModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/linearModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/linearModel.C.o -c /<>/source/QSAR/linearModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/source/QSAR/linearModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ [ 50%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/logitModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/logitModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/logitModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/logitModel.C.o -c /<>/source/QSAR/logitModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/logitModel.h:10, from /<>/source/QSAR/logitModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: note: by ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: warning: ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ was hidden [-Woverloaded-virtual=] /<>/include/BALL/QSAR/logitModel.h:19:35: note: by ‘BALL::QSAR::LogitModel& BALL::QSAR::LogitModel::operator=(BALL::QSAR::LogitModel&)’ 19 | class BALL_EXPORT LogitModel : public ClassificationModel | ^~~~~~~~~~ /<>/source/QSAR/logitModel.C: In member function ‘virtual Eigen::VectorXd BALL::QSAR::LogitModel::predict(const std::vector&, bool)’: /<>/source/QSAR/logitModel.C:90:52: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘Eigen::Index’ {aka ‘int’} [-Wsign-compare] 90 | for (unsigned int i = 0; i < res.rows(); i++) | ~~^~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/composite.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘virtual void BALL::QSAR::LogitModel::readFromFile(std::string)’ at /<>/source/QSAR/logitModel.C:243:16: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/Model.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/Model.C.o -MF CMakeFiles/BALL.dir/source/QSAR/Model.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/Model.C.o -c /<>/source/QSAR/Model.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/source/QSAR/Model.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/source/QSAR/Model.C:7: /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/nonlinearModel.h:19:35: note: by ‘BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)’ 19 | class BALL_EXPORT NonLinearModel : public RegressionModel | ^~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/kernelModel.h:14: /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:27:35: note: by ‘BALL::QSAR::KernelModel::operator=’ 27 | class BALL_EXPORT KernelModel : public NonLinearModel | ^~~~~~~~~~~ /<>/source/QSAR/Model.C: In member function ‘void BALL::QSAR::Model::readDescriptorInformation()’: /<>/source/QSAR/Model.C:182:50: warning: variable ‘y_transform’ set but not used [-Wunused-but-set-variable] 182 | bool transform = 0; bool y_transform = 0; | ^~~~~~~~~~~ /<>/source/QSAR/Model.C: In member function ‘Eigen::VectorXd BALL::QSAR::Model::getSubstanceVector(const Eigen::VectorXd&, bool)’: /<>/source/QSAR/Model.C:316:72: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘Eigen::Index’ {aka ‘int’} [-Wsign-compare] 316 | if ( (data != NULL && data->getNoDescriptors() != substance.rows()) || (data == NULL && substance.rows() <= *(descriptor_IDs_.end()--)) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/Model.C:316:130: warning: comparison of integer expressions of different signedness: ‘Eigen::Index’ {aka ‘int’} and ‘const unsigned int’ [-Wsign-compare] 316 | if ( (data != NULL && data->getNoDescriptors() != substance.rows()) || (data == NULL && substance.rows() <= *(descriptor_IDs_.end()--)) ) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/Model.C: In member function ‘void BALL::QSAR::Model::readVector(Eigen::RowVectorXd&, std::ifstream&, unsigned int, bool)’: /<>/source/QSAR/Model.C:486:108: warning: unused parameter ‘column_vector’ [-Wunused-parameter] 486 | void Model::readVector(Eigen::RowVectorXd & vec, ifstream& in, unsigned int no_cells, bool column_vector) | ~~~~~^~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/composite.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘void BALL::QSAR::Model::readModelParametersFromFile(std::ifstream&)’ at /<>/source/QSAR/Model.C:509:16: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/modelFactory.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/modelFactory.C.o -MF CMakeFiles/BALL.dir/source/QSAR/modelFactory.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/modelFactory.C.o -c /<>/source/QSAR/modelFactory.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/source/QSAR/modelFactory.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/nBModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/nBModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/nBModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/nBModel.C.o -c /<>/source/QSAR/nBModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/include/BALL/QSAR/nBModel.h:14, from /<>/source/QSAR/nBModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: note: by ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: warning: ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ was hidden [-Woverloaded-virtual=] /<>/include/BALL/QSAR/bayesModel.h:18:35: note: by ‘BALL::QSAR::BayesModel::operator=’ 18 | class BALL_EXPORT BayesModel : public ClassificationModel | ^~~~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: warning: ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ was hidden [-Woverloaded-virtual=] 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/nBModel.h:27:35: note: by ‘BALL::QSAR::NBModel& BALL::QSAR::NBModel::operator=(BALL::QSAR::NBModel&)’ 27 | class BALL_EXPORT NBModel : public BayesModel | ^~~~~~~ /<>/source/QSAR/nBModel.C: In member function ‘virtual void BALL::QSAR::NBModel::saveToFile(std::string)’: /<>/source/QSAR/nBModel.C:240:30: warning: variable ‘centered_y’ set but not used [-Wunused-but-set-variable] 240 | bool centered_y = 0; | ^~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/QSAR/common.h:4, from /<>/include/BALL/QSAR/nBModel.h:10: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual std::vector BALL::QSAR::NBModel::getParameters() const’ at /<>/source/QSAR/nBModel.C:161:15: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual std::vector BALL::QSAR::NBModel::getParameters() const’ at /<>/source/QSAR/nBModel.C:162:15: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/nonlinearModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/nonlinearModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/nonlinearModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/nonlinearModel.C.o -c /<>/source/QSAR/nonlinearModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/source/QSAR/nonlinearModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/nonlinearModel.h:19:35: note: by ‘BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)’ 19 | class BALL_EXPORT NonLinearModel : public RegressionModel | ^~~~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/partialChargeBase.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/partialChargeBase.C.o -MF CMakeFiles/BALL.dir/source/QSAR/partialChargeBase.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/partialChargeBase.C.o -c /<>/source/QSAR/partialChargeBase.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/source/QSAR/partialChargeBase.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/partialChargeBase.C: In member function ‘virtual void BALL::PartialChargeBase::calculate_(BALL::AtomContainer&)’: /<>/source/QSAR/partialChargeBase.C:108:40: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (it = ac.beginAtom(); it != ac.endAtom(); ++it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/partialChargeBase.C: In member function ‘virtual void BALL::PartialChargeBase::calculate_(BALL::AtomContainer&)’: /<>/source/QSAR/partialChargeBase.C:108:40: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (it = ac.beginAtom(); it != ac.endAtom(); ++it) | ^ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/partialChargeDescriptors.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/partialChargeDescriptors.C.o -MF CMakeFiles/BALL.dir/source/QSAR/partialChargeDescriptors.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/partialChargeDescriptors.C.o -c /<>/source/QSAR/partialChargeDescriptors.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/partialChargeBase.h:10, from /<>/include/BALL/QSAR/partialChargeDescriptors.h:11, from /<>/source/QSAR/partialChargeDescriptors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/partialChargeProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/partialChargeProcessor.C.o -MF CMakeFiles/BALL.dir/source/QSAR/partialChargeProcessor.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/partialChargeProcessor.C.o -c /<>/source/QSAR/partialChargeProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/QSAR/partialChargeProcessor.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/partialChargeProcessor.C: In member function ‘void BALL::PartialChargeProcessor::calculatePEOE(BALL::AtomContainer&)’: /<>/source/QSAR/partialChargeProcessor.C:85:48: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 85 | atom_it = ac.beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/partialChargeProcessor.C: In member function ‘void BALL::PartialChargeProcessor::calculatePEOE(BALL::AtomContainer&)’: /<>/source/QSAR/partialChargeProcessor.C:85:48: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 85 | atom_it = ac.beginAtom(); | ^ In file included from /<>/source/QSAR/partialChargeProcessor.C:12: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/partialChargeProcessor.C:88:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 88 | BALL_FOREACH_BOND (ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/partialChargeProcessor.C:88:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 88 | BALL_FOREACH_BOND (ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/partialChargeProcessor.C: In member function ‘void BALL::PartialChargeProcessor::calculatePEOE(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/partialChargeProcessor.C:88:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 88 | BALL_FOREACH_BOND (ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/QSARData.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/QSARData.C.o -MF CMakeFiles/BALL.dir/source/QSAR/QSARData.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/QSARData.C.o -c /<>/source/QSAR/QSARData.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/source/QSAR/QSARData.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/source/QSAR/QSARData.C: In member function ‘void BALL::QSAR::QSARData::readSDFile(const char*)’: /<>/source/QSAR/QSARData.C:77:67: warning: catching polymorphic type ‘class BALL::Exception::ParseError’ by value [-Wcatch-value=] 77 | catch(BALL::Exception::ParseError e) | ^ /<>/source/QSAR/QSARData.C: In member function ‘void BALL::QSAR::QSARData::readSDFile(const char*, std::set&, bool, bool, bool, bool, bool)’: /<>/source/QSAR/QSARData.C:201:67: warning: catching polymorphic type ‘class BALL::Exception::ParseError’ by value [-Wcatch-value=] 201 | catch(BALL::Exception::ParseError e) | ^ /<>/source/QSAR/QSARData.C:292:86: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 292 | catch(BALL::Exception::InvalidFormat g) | ^ /<>/source/QSAR/QSARData.C:313:94: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 313 | catch(BALL::Exception::InvalidFormat g) | ^ /<>/source/QSAR/QSARData.C:330:69: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 330 | for(int p=no_internal_descriptors; p>/source/QSAR/QSARData.C:332:72: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 332 | if(descriptor_matrix_[p].size()>/source/QSAR/QSARData.C:343:51: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 343 | for(int act=0; act>/source/QSAR/QSARData.C:345:58: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 345 | if(Y_[act].size()>/source/QSAR/QSARData.C: In member function ‘void BALL::QSAR::QSARData::readSDFile(const char*, std::multiset&, bool, bool, bool)’: /<>/source/QSAR/QSARData.C:399:67: warning: catching polymorphic type ‘class BALL::Exception::ParseError’ by value [-Wcatch-value=] 399 | catch(BALL::Exception::ParseError e) | ^ /<>/source/QSAR/QSARData.C:460:94: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 460 | catch(BALL::Exception::InvalidFormat g) | ^ /<>/source/QSAR/QSARData.C:488:94: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 488 | catch(BALL::Exception::InvalidFormat g) | ^ /<>/source/QSAR/QSARData.C: In member function ‘void BALL::QSAR::QSARData::readCSVFile(const char*, int, bool, bool, const char*, bool, bool)’: /<>/source/QSAR/QSARData.C:1097:86: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 1097 | catch(BALL::Exception::InvalidFormat g) | ^ /<>/source/QSAR/QSARData.C:1119:94: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 1119 | catch(BALL::Exception::InvalidFormat g) | ^ /<>/source/QSAR/QSARData.C: In member function ‘std::vector BALL::QSAR::QSARData::evenSplit(int, int, int) const’: /<>/source/QSAR/QSARData.C:1354:54: warning: comparison of integer expressions of different signedness: ‘BALL::Size’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 1354 | if (i%no_test_splits == current_test_split_id) | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/bits/stl_algo.h:61, from /usr/include/c++/13/algorithm:61, from /usr/include/boost/move/algorithm.hpp:31, from /usr/include/boost/move/move.hpp:32, from /usr/include/boost/unordered/unordered_map.hpp:21, from /usr/include/boost/unordered_map.hpp:17, from /<>/include/BALL/DATATYPE/hashMap.h:24, from /<>/include/BALL/CONCEPT/persistenceManager.h:13, from /<>/include/BALL/CONCEPT/timeStamp.h:21, from /<>/include/BALL/CONCEPT/composite.h:41: /usr/include/c++/13/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1812 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/13/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1918 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 /usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/composite.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void BALL::QSAR::QSARData::insertSubstance(const BALL::QSAR::QSARData*, int, bool)’ at /<>/source/QSAR/QSARData.C:1453:36: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void BALL::QSAR::QSARData::insertSubstance(const BALL::QSAR::QSARData*, int, bool)’ at /<>/source/QSAR/QSARData.C:1464:20: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/include/c++/13/bits/stl_algo.h:4861:18, inlined from ‘void BALL::QSAR::QSARData::discretizeY(std::vector)’ at /<>/source/QSAR/QSARData.C:1192:8: /usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1947 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1948 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1949 | __comp); | ~~~~~~~ In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/13/bits/stl_algo.h:1950:31, inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]’ at /usr/include/c++/13/bits/stl_algo.h:4861:18, inlined from ‘void BALL::QSAR::QSARData::discretizeY(std::vector)’ at /<>/source/QSAR/QSARData.C:1192:8: /usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1864 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘void BALL::QSAR::QSARData::calculateTopologicalDescriptors(BALL::Molecule&, BALL::MolecularSimilarity&, const std::map&)’ at /<>/source/QSAR/QSARData.C:744:40: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘void BALL::QSAR::QSARData::readSDFile(const char*)’ at /<>/source/QSAR/QSARData.C:104:40: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void BALL::QSAR::QSARData::readSDFile(const char*, std::set&, bool, bool, bool, bool, bool)’ at /<>/source/QSAR/QSARData.C:290:32: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘void BALL::QSAR::QSARData::readSDFile(const char*, std::set&, bool, bool, bool, bool, bool)’ at /<>/source/QSAR/QSARData.C:334:38: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘void BALL::QSAR::QSARData::readSDFile(const char*, std::set&, bool, bool, bool, bool, bool)’ at /<>/source/QSAR/QSARData.C:347:24: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘void BALL::QSAR::QSARData::readSDFile(const char*, std::multiset&, bool, bool, bool)’ at /<>/source/QSAR/QSARData.C:457:42: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/registry.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/registry.C.o -MF CMakeFiles/BALL.dir/source/QSAR/registry.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/registry.C.o -c /<>/source/QSAR/registry.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/modelFactory.h:13, from /<>/include/BALL/QSAR/registry.h:5, from /<>/source/QSAR/registry.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/svmModel.h:10, from /<>/source/QSAR/registry.C:4: /<>/include/BALL/QSAR/classificationModel.h:39:46: note: by ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/svmModel.h:14: /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/nonlinearModel.h:19:35: note: by ‘BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)’ 19 | class BALL_EXPORT NonLinearModel : public RegressionModel | ^~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/kernelModel.h:14: /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:27:35: note: by ‘BALL::QSAR::KernelModel::operator=’ 27 | class BALL_EXPORT KernelModel : public NonLinearModel | ^~~~~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: warning: ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ was hidden [-Woverloaded-virtual=] 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/svmModel.h:25:35: note: by ‘BALL::QSAR::SVMModel& BALL::QSAR::SVMModel::operator=(BALL::QSAR::SVMModel&)’ 25 | class BALL_EXPORT SVMModel : public ClassificationModel | ^~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: warning: ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ was hidden [-Woverloaded-virtual=] 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ In file included from /<>/source/QSAR/registry.C:5: /<>/include/BALL/QSAR/logitModel.h:19:35: note: by ‘BALL::QSAR::LogitModel& BALL::QSAR::LogitModel::operator=(BALL::QSAR::LogitModel&)’ 19 | class BALL_EXPORT LogitModel : public ClassificationModel | ^~~~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: warning: ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ was hidden [-Woverloaded-virtual=] 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/snBModel.h:18, from /<>/source/QSAR/registry.C:6: /<>/include/BALL/QSAR/bayesModel.h:18:35: note: by ‘BALL::QSAR::BayesModel::operator=’ 18 | class BALL_EXPORT BayesModel : public ClassificationModel | ^~~~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: warning: ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ was hidden [-Woverloaded-virtual=] 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/snBModel.h:26:35: note: by ‘BALL::QSAR::SNBModel& BALL::QSAR::SNBModel::operator=(BALL::QSAR::SNBModel&)’ 26 | class BALL_EXPORT SNBModel : public BayesModel | ^~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: warning: ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ was hidden [-Woverloaded-virtual=] 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ In file included from /<>/source/QSAR/registry.C:7: /<>/include/BALL/QSAR/nBModel.h:27:35: note: by ‘BALL::QSAR::NBModel& BALL::QSAR::NBModel::operator=(BALL::QSAR::NBModel&)’ 27 | class BALL_EXPORT NBModel : public BayesModel | ^~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ In file included from /<>/source/QSAR/registry.C:9: /<>/include/BALL/QSAR/allModel.h:20:35: note: by ‘BALL::QSAR::ALLModel& BALL::QSAR::ALLModel::operator=(const BALL::QSAR::ALLModel&)’ 20 | class BALL_EXPORT ALLModel : public NonLinearModel | ^~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:49:38: warning: ‘virtual void BALL::QSAR::KernelModel::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 49 | void operator=(const Model& m); | ^~~~~~~~ In file included from /<>/source/QSAR/registry.C:10: /<>/include/BALL/QSAR/gpModel.h:21:35: note: by ‘BALL::QSAR::GPModel& BALL::QSAR::GPModel::operator=(const BALL::QSAR::GPModel&)’ 21 | class BALL_EXPORT GPModel : public KernelModel | ^~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ In file included from /<>/source/QSAR/registry.C:11: /<>/include/BALL/QSAR/knnModel.h:19:35: note: by ‘BALL::QSAR::KNNModel::operator=’ 19 | class BALL_EXPORT KNNModel : public ALLModel | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/rrModel.h:10, from /<>/include/BALL/QSAR/pcrModel.h:17, from /<>/include/BALL/QSAR/kpcrModel.h:14, from /<>/source/QSAR/registry.C:12: /<>/include/BALL/QSAR/mlrModel.h:22:35: note: by ‘BALL::QSAR::MLRModel& BALL::QSAR::MLRModel::operator=(const BALL::QSAR::MLRModel&)’ 22 | class BALL_EXPORT MLRModel : public LinearModel | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/rrModel.h:23:35: note: by ‘BALL::QSAR::RRModel& BALL::QSAR::RRModel::operator=(const BALL::QSAR::RRModel&)’ 23 | class BALL_EXPORT RRModel : public MLRModel | ^~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/pcrModel.h:26:35: note: by ‘BALL::QSAR::PCRModel& BALL::QSAR::PCRModel::operator=(const BALL::QSAR::PCRModel&)’ 26 | class BALL_EXPORT PCRModel : public LinearModel, public LatentVariableModel | ^~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:49:38: warning: ‘virtual void BALL::QSAR::KernelModel::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 49 | void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/kpcrModel.h:26:35: note: by ‘BALL::QSAR::KPCRModel& BALL::QSAR::KPCRModel::operator=(const BALL::QSAR::KPCRModel&)’ 26 | class BALL_EXPORT KPCRModel : public KernelModel, public LatentVariableModel | ^~~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:49:38: warning: ‘virtual void BALL::QSAR::KernelModel::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 49 | void operator=(const Model& m); | ^~~~~~~~ In file included from /<>/source/QSAR/registry.C:13: /<>/include/BALL/QSAR/kplsModel.h:26:35: note: by ‘BALL::QSAR::KPLSModel& BALL::QSAR::KPLSModel::operator=(const BALL::QSAR::KPLSModel&)’ 26 | class BALL_EXPORT KPLSModel : public KernelModel, public LatentVariableModel | ^~~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: warning: ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ was hidden [-Woverloaded-virtual=] 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ In file included from /<>/source/QSAR/registry.C:14: /<>/include/BALL/QSAR/ldaModel.h:21:35: note: by ‘BALL::QSAR::LDAModel& BALL::QSAR::LDAModel::operator=(BALL::QSAR::LDAModel&)’ 21 | class BALL_EXPORT LDAModel : public ClassificationModel | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/oplsModel.h:10, from /<>/source/QSAR/registry.C:16: /<>/include/BALL/QSAR/plsModel.h:28:35: note: by ‘BALL::QSAR::PLSModel& BALL::QSAR::PLSModel::operator=(const BALL::QSAR::PLSModel&)’ 28 | class BALL_EXPORT PLSModel : public LinearModel, public LatentVariableModel | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/oplsModel.h:19:35: note: by ‘BALL::QSAR::OPLSModel& BALL::QSAR::OPLSModel::operator=(const BALL::QSAR::OPLSModel&)’ 19 | class BALL_EXPORT OPLSModel : public PLSModel | ^~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/factory.h:9, from /<>/include/BALL/QSAR/modelFactory.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:52:35: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:57:35: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:63:34: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:71:34: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:72:34: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:81:34: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:82:34: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:89:35: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:90:35: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:96:34: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:103:34: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:109:34: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:130:34: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:138:35: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:139:35: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:146:35: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:147:35: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘BALL::QSAR::Registry::Registry()’ at /<>/source/QSAR/registry.C:148:35: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/regressionModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/regressionModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/regressionModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/regressionModel.C.o -c /<>/source/QSAR/regressionModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/source/QSAR/regressionModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/regressionModel.C: In member function ‘void BALL::QSAR::RegressionModel::show()’: /<>/source/QSAR/regressionModel.C:48:30: warning: variable ‘sterr’ set but not used [-Wunused-but-set-variable] 48 | bool sterr = 0; | ^~~~~ /<>/source/QSAR/regressionModel.C: In member function ‘virtual void BALL::QSAR::RegressionModel::saveToFile(std::string)’: /<>/source/QSAR/regressionModel.C:129:30: warning: variable ‘sterr’ set but not used [-Wunused-but-set-variable] 129 | bool sterr = 0; | ^~~~~ /<>/source/QSAR/regressionModel.C: In member function ‘virtual void BALL::QSAR::RegressionModel::saveDescriptorInformationToFile(std::ofstream&)’: /<>/source/QSAR/regressionModel.C:259:73: warning: comparison of integer expressions of different signedness: ‘Eigen::Index’ {aka ‘int’} and ‘std::multiset::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 259 | bool trained = (training_result_.rows() == descriptor_IDs_.size()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/regressionModel.C:285:73: warning: comparison of integer expressions of different signedness: ‘Eigen::Index’ {aka ‘int’} and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 285 | bool trained = (training_result_.rows() == descriptor_names_.size()); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/regressionValidation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/regressionValidation.C.o -MF CMakeFiles/BALL.dir/source/QSAR/regressionValidation.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/regressionValidation.C.o -c /<>/source/QSAR/regressionValidation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/regressionValidation.h:11, from /<>/source/QSAR/regressionValidation.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/source/QSAR/regressionValidation.C:7: /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/source/QSAR/regressionValidation.C:8: /<>/include/BALL/QSAR/nonlinearModel.h:19:35: note: by ‘BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)’ 19 | class BALL_EXPORT NonLinearModel : public RegressionModel | ^~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/kernelModel.h:14: /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:27:35: note: by ‘BALL::QSAR::KernelModel::operator=’ 27 | class BALL_EXPORT KernelModel : public NonLinearModel | ^~~~~~~~~~~ /<>/source/QSAR/regressionValidation.C: In member function ‘virtual void BALL::QSAR::RegressionValidation::testInputData(bool)’: /<>/source/QSAR/regressionValidation.C:252:29: warning: variable ‘col’ set but not used [-Wunused-but-set-variable] 252 | int col = model_->data->descriptor_matrix_.size(); | ^~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/ringPerceptionProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/ringPerceptionProcessor.C.o -MF CMakeFiles/BALL.dir/source/QSAR/ringPerceptionProcessor.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/ringPerceptionProcessor.C.o -c /<>/source/QSAR/ringPerceptionProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/QSAR/ringPerceptionProcessor.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/ringPerceptionProcessor.C:8: /<>/source/QSAR/ringPerceptionProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::RingPerceptionProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/ringPerceptionProcessor.C:59:9: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 59 | BALL_FOREACH_ATOM(ac, a_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/ringPerceptionProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::RingPerceptionProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/ringPerceptionProcessor.C:59:9: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 59 | BALL_FOREACH_ATOM(ac, a_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/ringPerceptionProcessor.C:68:9: note: in expansion of macro ‘BALL_FOREACH_BOND’ 68 | BALL_FOREACH_BOND(ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/ringPerceptionProcessor.C:68:9: note: in expansion of macro ‘BALL_FOREACH_BOND’ 68 | BALL_FOREACH_BOND(ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/ringPerceptionProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::RingPerceptionProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/ringPerceptionProcessor.C:68:9: note: in expansion of macro ‘BALL_FOREACH_BOND’ 68 | BALL_FOREACH_BOND(ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:15: /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h: In instantiation of ‘BALL::TSimpleMolecularGraph::TSimpleMolecularGraph(const BALL::Molecule&) [with Node = int; Edge = int]’: /<>/source/QSAR/ringPerceptionProcessor.C:89:37: required from here /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h:228:25: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 228 | for (ai = molecule.beginAtom(); +ai; ++ai) | ~~~^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/STRUCTURE/simpleMolecularGraph.h:230:33: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 230 | for (bi = ai->beginBond(); +bi; ++bi) | ~~~^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/simpleBase.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/simpleBase.C.o -MF CMakeFiles/BALL.dir/source/QSAR/simpleBase.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/simpleBase.C.o -c /<>/source/QSAR/simpleBase.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/source/QSAR/simpleBase.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/QSAR/simpleBase.C:8: /<>/source/QSAR/simpleBase.C: In member function ‘virtual void BALL::SimpleBase::calculate_(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/simpleBase.C:269:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 269 | BALL_FOREACH_BOND (ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/simpleBase.C:269:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 269 | BALL_FOREACH_BOND (ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/simpleBase.C: In member function ‘virtual void BALL::SimpleBase::calculate_(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/QSAR/simpleBase.C:269:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 269 | BALL_FOREACH_BOND (ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/simpleDescriptors.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/simpleDescriptors.C.o -MF CMakeFiles/BALL.dir/source/QSAR/simpleDescriptors.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/simpleDescriptors.C.o -c /<>/source/QSAR/simpleDescriptors.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/simpleBase.h:10, from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/source/QSAR/simpleDescriptors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/source/QSAR/simpleDescriptors.C:9: /<>/source/QSAR/simpleDescriptors.C: In member function ‘virtual double BALL::NumberOfHydrophobicAtoms::compute(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/simpleDescriptors.C:677:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 677 | BALL_FOREACH_ATOM (ac, a_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/simpleDescriptors.C: In member function ‘virtual double BALL::NumberOfHydrophobicAtoms::compute(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/simpleDescriptors.C:677:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 677 | BALL_FOREACH_ATOM (ac, a_it) | ^~~~~~~~~~~~~~~~~ /<>/source/QSAR/simpleDescriptors.C: In member function ‘virtual double BALL::NumberOfHydrogenBondDonors::compute(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/simpleDescriptors.C:746:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 746 | BALL_FOREACH_ATOM (ac, a_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/simpleDescriptors.C: In member function ‘virtual double BALL::NumberOfHydrogenBondAcceptors::compute(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/QSAR/simpleDescriptors.C:815:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 815 | BALL_FOREACH_ATOM (ac, a_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/snBModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/snBModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/snBModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/snBModel.C.o -c /<>/source/QSAR/snBModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/bayesModel.h:10, from /<>/include/BALL/QSAR/snBModel.h:18, from /<>/source/QSAR/snBModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: note: by ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: warning: ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ was hidden [-Woverloaded-virtual=] /<>/include/BALL/QSAR/bayesModel.h:18:35: note: by ‘BALL::QSAR::BayesModel::operator=’ 18 | class BALL_EXPORT BayesModel : public ClassificationModel | ^~~~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: warning: ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ was hidden [-Woverloaded-virtual=] 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/snBModel.h:26:35: note: by ‘BALL::QSAR::SNBModel& BALL::QSAR::SNBModel::operator=(BALL::QSAR::SNBModel&)’ 26 | class BALL_EXPORT SNBModel : public BayesModel | ^~~~~~~~ /<>/source/QSAR/snBModel.C: In member function ‘virtual void BALL::QSAR::SNBModel::saveToFile(std::string)’: /<>/source/QSAR/snBModel.C:234:30: warning: variable ‘centered_y’ set but not used [-Wunused-but-set-variable] 234 | bool centered_y = 0; | ^~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/QSAR/common.h:4, from /<>/include/BALL/QSAR/snBModel.h:10: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual std::vector BALL::QSAR::SNBModel::getParameters() const’ at /<>/source/QSAR/snBModel.C:205:15: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual std::vector BALL::QSAR::SNBModel::getParameters() const’ at /<>/source/QSAR/snBModel.C:206:15: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual void BALL::QSAR::SNBModel::train()’ at /<>/source/QSAR/snBModel.C:67:36: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/statistics.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/statistics.C.o -MF CMakeFiles/BALL.dir/source/QSAR/statistics.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/statistics.C.o -c /<>/source/QSAR/statistics.C /<>/source/QSAR/statistics.C: In static member function ‘static double BALL::QSAR::Statistics::calculateRankCorrelation(std::vector&, std::vector&)’: /<>/source/QSAR/statistics.C:169:63: warning: comparison of integer expressions of different signedness: ‘BALL::Size’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 169 | for(Size i=position; i>/source/QSAR/statistics.C:189:63: warning: comparison of integer expressions of different signedness: ‘BALL::Size’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 189 | for(Size i=position; i>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/surfaceBase.C.o -MF CMakeFiles/BALL.dir/source/QSAR/surfaceBase.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/surfaceBase.C.o -c /<>/source/QSAR/surfaceBase.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/source/QSAR/surfaceBase.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/source/QSAR/surfaceBase.C:9: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/surfaceDescriptors.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/surfaceDescriptors.C.o -MF CMakeFiles/BALL.dir/source/QSAR/surfaceDescriptors.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/surfaceDescriptors.C.o -c /<>/source/QSAR/surfaceDescriptors.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/descriptor.h:14, from /<>/include/BALL/QSAR/surfaceBase.h:10, from /<>/include/BALL/QSAR/surfaceDescriptors.h:10, from /<>/source/QSAR/surfaceDescriptors.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/svmModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/svmModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/svmModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/svmModel.C.o -c /<>/source/QSAR/svmModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/svmModel.h:10, from /<>/source/QSAR/svmModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: note: by ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/svmModel.h:14: /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/nonlinearModel.h:19:35: note: by ‘BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)’ 19 | class BALL_EXPORT NonLinearModel : public RegressionModel | ^~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/kernelModel.h:14: /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:27:35: note: by ‘BALL::QSAR::KernelModel::operator=’ 27 | class BALL_EXPORT KernelModel : public NonLinearModel | ^~~~~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: warning: ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ was hidden [-Woverloaded-virtual=] 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/svmModel.h:25:35: note: by ‘BALL::QSAR::SVMModel& BALL::QSAR::SVMModel::operator=(BALL::QSAR::SVMModel&)’ 25 | class BALL_EXPORT SVMModel : public ClassificationModel | ^~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/svrModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/svrModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/svrModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/svrModel.C.o -c /<>/source/QSAR/svrModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/svrModel.h:10, from /<>/source/QSAR/svrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/nonlinearModel.h:19:35: note: by ‘BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)’ 19 | class BALL_EXPORT NonLinearModel : public RegressionModel | ^~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/kernelModel.h:14: /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:27:35: note: by ‘BALL::QSAR::KernelModel::operator=’ 27 | class BALL_EXPORT KernelModel : public NonLinearModel | ^~~~~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:49:38: warning: ‘virtual void BALL::QSAR::KernelModel::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 49 | void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/svrModel.h:22:35: note: by ‘BALL::QSAR::SVRModel& BALL::QSAR::SVRModel::operator=(const BALL::QSAR::SVRModel&)’ 22 | class BALL_EXPORT SVRModel : public KernelModel | ^~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/validation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/validation.C.o -MF CMakeFiles/BALL.dir/source/QSAR/validation.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/validation.C.o -c /<>/source/QSAR/validation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/source/QSAR/validation.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/composite.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void BALL::QSAR::Validation::setTestLine(int, int, bool)’ at /<>/source/QSAR/validation.C:85:42: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/allModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/allModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/allModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/allModel.C.o -c /<>/source/QSAR/allModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/allModel.h:10, from /<>/source/QSAR/allModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/nonlinearModel.h:19:35: note: by ‘BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)’ 19 | class BALL_EXPORT NonLinearModel : public RegressionModel | ^~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/allModel.h:20:35: note: by ‘BALL::QSAR::ALLModel& BALL::QSAR::ALLModel::operator=(const BALL::QSAR::ALLModel&)’ 20 | class BALL_EXPORT ALLModel : public NonLinearModel | ^~~~~~~~ /<>/source/QSAR/allModel.C: In member function ‘virtual void BALL::QSAR::ALLModel::saveToFile(std::string)’: /<>/source/QSAR/allModel.C:202:30: warning: variable ‘sterr’ set but not used [-Wunused-but-set-variable] 202 | bool sterr = 0; | ^~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/composite.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual std::vector BALL::QSAR::ALLModel::getParameters() const’ at /<>/source/QSAR/allModel.C:191:15: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual std::vector BALL::QSAR::ALLModel::getParameters() const’ at /<>/source/QSAR/allModel.C:192:15: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/featureSelection.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/featureSelection.C.o -MF CMakeFiles/BALL.dir/source/QSAR/featureSelection.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/featureSelection.C.o -c /<>/source/QSAR/featureSelection.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/featureSelection.h:9, from /<>/source/QSAR/featureSelection.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/featureSelection.h:13: /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/nonlinearModel.h:19:35: note: by ‘BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)’ 19 | class BALL_EXPORT NonLinearModel : public RegressionModel | ^~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/kernelModel.h:14: /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:27:35: note: by ‘BALL::QSAR::KernelModel::operator=’ 27 | class BALL_EXPORT KernelModel : public NonLinearModel | ^~~~~~~~~~~ /<>/source/QSAR/featureSelection.C: In member function ‘void BALL::QSAR::FeatureSelection::forward(bool, int, bool)’: /<>/source/QSAR/featureSelection.C:134:72: warning: catching polymorphic type ‘class BALL::QSAR::Exception::NoPCAVariance’ by value [-Wcatch-value=] 134 | catch(Exception::NoPCAVariance e) | ^ /<>/source/QSAR/featureSelection.C: In member function ‘void BALL::QSAR::FeatureSelection::backwardSelection(int, bool)’: /<>/source/QSAR/featureSelection.C:288:72: warning: catching polymorphic type ‘class BALL::QSAR::Exception::NoPCAVariance’ by value [-Wcatch-value=] 288 | catch(Exception::NoPCAVariance e) | ^ /<>/source/QSAR/featureSelection.C: In member function ‘void BALL::QSAR::FeatureSelection::twinScan(int, bool)’: /<>/source/QSAR/featureSelection.C:449:64: warning: catching polymorphic type ‘class BALL::QSAR::Exception::NoPCAVariance’ by value [-Wcatch-value=] 449 | catch(Exception::NoPCAVariance e) | ^ /<>/source/QSAR/featureSelection.C:456:87: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 456 | std::multiset< pair >::iterator it = potential_descriptors.insert(make_pair(1-model_->model_val->getCVRes(), i)); | ^~ /<>/source/QSAR/featureSelection.C:485:64: warning: catching polymorphic type ‘class BALL::QSAR::Exception::NoPCAVariance’ by value [-Wcatch-value=] 485 | catch(Exception::NoPCAVariance e) | ^ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/gpModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/gpModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/gpModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/gpModel.C.o -c /<>/source/QSAR/gpModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/gpModel.h:10, from /<>/source/QSAR/gpModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/nonlinearModel.h:19:35: note: by ‘BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)’ 19 | class BALL_EXPORT NonLinearModel : public RegressionModel | ^~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/kernelModel.h:14: /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:27:35: note: by ‘BALL::QSAR::KernelModel::operator=’ 27 | class BALL_EXPORT KernelModel : public NonLinearModel | ^~~~~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:49:38: warning: ‘virtual void BALL::QSAR::KernelModel::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 49 | void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/gpModel.h:21:35: note: by ‘BALL::QSAR::GPModel& BALL::QSAR::GPModel::operator=(const BALL::QSAR::GPModel&)’ 21 | class BALL_EXPORT GPModel : public KernelModel | ^~~~~~~ /<>/source/QSAR/gpModel.C: In member function ‘virtual double BALL::QSAR::GPModel::calculateStdErr()’: /<>/source/QSAR/gpModel.C:88:52: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘Eigen::Index’ {aka ‘int’} [-Wsign-compare] 88 | for (unsigned int i = 1; i <= K_t_.cols(); i++) | ~~^~~~~~~~~~~~~~ /<>/source/QSAR/gpModel.C:90:60: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘Eigen::Index’ {aka ‘int’} [-Wsign-compare] 90 | for (unsigned int j = 1; j <= K_t_.cols(); j++) | ~~^~~~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/knnModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/knnModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/knnModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/knnModel.C.o -c /<>/source/QSAR/knnModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/allModel.h:10, from /<>/include/BALL/QSAR/knnModel.h:10, from /<>/source/QSAR/knnModel.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/nonlinearModel.h:19:35: note: by ‘BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)’ 19 | class BALL_EXPORT NonLinearModel : public RegressionModel | ^~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/allModel.h:20:35: note: by ‘BALL::QSAR::ALLModel& BALL::QSAR::ALLModel::operator=(const BALL::QSAR::ALLModel&)’ 20 | class BALL_EXPORT ALLModel : public NonLinearModel | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/knnModel.h:19:35: note: by ‘BALL::QSAR::KNNModel::operator=’ 19 | class BALL_EXPORT KNNModel : public ALLModel | ^~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/composite.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual std::vector BALL::QSAR::KNNModel::getParameters() const’ at /<>/source/QSAR/knnModel.C:62:15: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/kpcrModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/kpcrModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/kpcrModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/kpcrModel.C.o -c /<>/source/QSAR/kpcrModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/kpcrModel.h:10, from /<>/source/QSAR/kpcrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/nonlinearModel.h:19:35: note: by ‘BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)’ 19 | class BALL_EXPORT NonLinearModel : public RegressionModel | ^~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/kernelModel.h:14: /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:27:35: note: by ‘BALL::QSAR::KernelModel::operator=’ 27 | class BALL_EXPORT KernelModel : public NonLinearModel | ^~~~~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/rrModel.h:10, from /<>/include/BALL/QSAR/pcrModel.h:17, from /<>/include/BALL/QSAR/kpcrModel.h:14: /<>/include/BALL/QSAR/mlrModel.h:22:35: note: by ‘BALL::QSAR::MLRModel& BALL::QSAR::MLRModel::operator=(const BALL::QSAR::MLRModel&)’ 22 | class BALL_EXPORT MLRModel : public LinearModel | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/rrModel.h:23:35: note: by ‘BALL::QSAR::RRModel& BALL::QSAR::RRModel::operator=(const BALL::QSAR::RRModel&)’ 23 | class BALL_EXPORT RRModel : public MLRModel | ^~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/pcrModel.h:26:35: note: by ‘BALL::QSAR::PCRModel& BALL::QSAR::PCRModel::operator=(const BALL::QSAR::PCRModel&)’ 26 | class BALL_EXPORT PCRModel : public LinearModel, public LatentVariableModel | ^~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:49:38: warning: ‘virtual void BALL::QSAR::KernelModel::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 49 | void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/kpcrModel.h:26:35: note: by ‘BALL::QSAR::KPCRModel& BALL::QSAR::KPCRModel::operator=(const BALL::QSAR::KPCRModel&)’ 26 | class BALL_EXPORT KPCRModel : public KernelModel, public LatentVariableModel | ^~~~~~~~~ [ 56%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/kplsModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/kplsModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/kplsModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/kplsModel.C.o -c /<>/source/QSAR/kplsModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/nonlinearModel.h:10, from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/kplsModel.h:10, from /<>/source/QSAR/kplsModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/nonlinearModel.h:19:35: note: by ‘BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)’ 19 | class BALL_EXPORT NonLinearModel : public RegressionModel | ^~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/kernelModel.h:14: /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:27:35: note: by ‘BALL::QSAR::KernelModel::operator=’ 27 | class BALL_EXPORT KernelModel : public NonLinearModel | ^~~~~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:49:38: warning: ‘virtual void BALL::QSAR::KernelModel::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 49 | void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/kplsModel.h:26:35: note: by ‘BALL::QSAR::KPLSModel& BALL::QSAR::KPLSModel::operator=(const BALL::QSAR::KPLSModel&)’ 26 | class BALL_EXPORT KPLSModel : public KernelModel, public LatentVariableModel | ^~~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ In file included from /<>/source/QSAR/kplsModel.C:7: /<>/include/BALL/QSAR/mlrModel.h:22:35: note: by ‘BALL::QSAR::MLRModel& BALL::QSAR::MLRModel::operator=(const BALL::QSAR::MLRModel&)’ 22 | class BALL_EXPORT MLRModel : public LinearModel | ^~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/ldaModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/ldaModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/ldaModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/ldaModel.C.o -c /<>/source/QSAR/ldaModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/classificationModel.h:10, from /<>/include/BALL/QSAR/ldaModel.h:10, from /<>/source/QSAR/ldaModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: note: by ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ 39 | virtual void operator=(ClassificationModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/classificationModel.h:39:46: warning: ‘virtual void BALL::QSAR::ClassificationModel::operator=(BALL::QSAR::ClassificationModel&)’ was hidden [-Woverloaded-virtual=] /<>/include/BALL/QSAR/ldaModel.h:21:35: note: by ‘BALL::QSAR::LDAModel& BALL::QSAR::LDAModel::operator=(BALL::QSAR::LDAModel&)’ 21 | class BALL_EXPORT LDAModel : public ClassificationModel | ^~~~~~~~ /<>/source/QSAR/ldaModel.C: In member function ‘virtual Eigen::VectorXd BALL::QSAR::LDAModel::predict(const std::vector&, bool)’: /<>/source/QSAR/ldaModel.C:123:68: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘Eigen::Index’ {aka ‘int’} [-Wsign-compare] 123 | for (unsigned int i = 0; i < s.rows(); i++) | ~~^~~~~~~~~~ /<>/source/QSAR/ldaModel.C: In member function ‘virtual void BALL::QSAR::LDAModel::saveToFile(std::string)’: /<>/source/QSAR/ldaModel.C:169:30: warning: variable ‘centered_y’ set but not used [-Wunused-but-set-variable] 169 | bool centered_y = 0; | ^~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/mlrModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/mlrModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/mlrModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/mlrModel.C.o -c /<>/source/QSAR/mlrModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/mlrModel.h:10, from /<>/source/QSAR/mlrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] /<>/include/BALL/QSAR/mlrModel.h:22:35: note: by ‘BALL::QSAR::MLRModel& BALL::QSAR::MLRModel::operator=(const BALL::QSAR::MLRModel&)’ 22 | class BALL_EXPORT MLRModel : public LinearModel | ^~~~~~~~ /<>/source/QSAR/mlrModel.C: In member function ‘virtual void BALL::QSAR::MLRModel::train()’: /<>/source/QSAR/mlrModel.C:48:65: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 48 | catch(BALL::Exception::GeneralException e) | ^ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/oplsModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/oplsModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/oplsModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/oplsModel.C.o -c /<>/source/QSAR/oplsModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/plsModel.h:10, from /<>/include/BALL/QSAR/oplsModel.h:10, from /<>/source/QSAR/oplsModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] /<>/include/BALL/QSAR/plsModel.h:28:35: note: by ‘BALL::QSAR::PLSModel& BALL::QSAR::PLSModel::operator=(const BALL::QSAR::PLSModel&)’ 28 | class BALL_EXPORT PLSModel : public LinearModel, public LatentVariableModel | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/oplsModel.h:19:35: note: by ‘BALL::QSAR::OPLSModel& BALL::QSAR::OPLSModel::operator=(const BALL::QSAR::OPLSModel&)’ 19 | class BALL_EXPORT OPLSModel : public PLSModel | ^~~~~~~~~ /<>/source/QSAR/oplsModel.C: In member function ‘virtual void BALL::QSAR::OPLSModel::train()’: /<>/source/QSAR/oplsModel.C:43:52: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘Eigen::Index’ {aka ‘int’} [-Wsign-compare] 43 | for (unsigned int i = 1; i <= u.rows(); i++) | ~~^~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/composite.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘virtual std::vector BALL::QSAR::OPLSModel::getParameters() const’ at /<>/source/QSAR/oplsModel.C:216:15: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘virtual std::vector BALL::QSAR::OPLSModel::getParameters() const’ at /<>/source/QSAR/oplsModel.C:217:15: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/pcrModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/pcrModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/pcrModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/pcrModel.C.o -c /<>/source/QSAR/pcrModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/pcrModel.h:10, from /<>/source/QSAR/pcrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] In file included from /<>/include/BALL/QSAR/rrModel.h:10, from /<>/include/BALL/QSAR/pcrModel.h:17: /<>/include/BALL/QSAR/mlrModel.h:22:35: note: by ‘BALL::QSAR::MLRModel& BALL::QSAR::MLRModel::operator=(const BALL::QSAR::MLRModel&)’ 22 | class BALL_EXPORT MLRModel : public LinearModel | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/rrModel.h:23:35: note: by ‘BALL::QSAR::RRModel& BALL::QSAR::RRModel::operator=(const BALL::QSAR::RRModel&)’ 23 | class BALL_EXPORT RRModel : public MLRModel | ^~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/pcrModel.h:26:35: note: by ‘BALL::QSAR::PCRModel& BALL::QSAR::PCRModel::operator=(const BALL::QSAR::PCRModel&)’ 26 | class BALL_EXPORT PCRModel : public LinearModel, public LatentVariableModel | ^~~~~~~~ /<>/source/QSAR/pcrModel.C: In static member function ‘static void BALL::QSAR::PCRModel::calculateEigenvectors(const Eigen::MatrixXd&, double, Eigen::MatrixXd&)’: /<>/source/QSAR/pcrModel.C:46:44: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘Eigen::Index’ {aka ‘int’} [-Wsign-compare] 46 | for (; last_vector < svd.singularValues().rows() && cols < data.rows() && explained_var/complete_var < frac_var ; last_vector++) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/QSAR/pcrModel.C:46:82: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘Eigen::Index’ {aka ‘int’} [-Wsign-compare] 46 | for (; last_vector < svd.singularValues().rows() && cols < data.rows() && explained_var/complete_var < frac_var ; last_vector++) | ~~~~~^~~~~~~~~~~~~ /<>/source/QSAR/pcrModel.C:55:52: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘Eigen::Index’ {aka ‘int’} [-Wsign-compare] 55 | for (unsigned int i = 0; i < data.rows(); i++) | ~~^~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/plsModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/plsModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/plsModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/plsModel.C.o -c /<>/source/QSAR/plsModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/plsModel.h:10, from /<>/source/QSAR/plsModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] /<>/include/BALL/QSAR/plsModel.h:28:35: note: by ‘BALL::QSAR::PLSModel& BALL::QSAR::PLSModel::operator=(const BALL::QSAR::PLSModel&)’ 28 | class BALL_EXPORT PLSModel : public LinearModel, public LatentVariableModel | ^~~~~~~~ In file included from /usr/include/eigen3/Eigen/SVD:36, from /usr/include/eigen3/Eigen/Dense:5, from /<>/source/QSAR/plsModel.C:8: /usr/include/eigen3/Eigen/src/SVD/SVDBase.h: In function ‘void Eigen::SVDBase::_solve_impl(const RhsType&, DstType&) const [with RhsType = Eigen::Transpose >; DstType = Eigen::Matrix; Derived = Eigen::JacobiSVD, 2>]’: /usr/include/eigen3/Eigen/src/SVD/SVDBase.h:308:6: note: parameter passing for argument of type ‘const Eigen::Transpose >’ changed in GCC 7.1 308 | void SVDBase::_solve_impl(const RhsType &rhs, DstType &dst) const | ^~~~~~~~~~~~~~~~ In file included from /usr/include/eigen3/Eigen/Core:323, from /<>/include/BALL/QSAR/statistics.h:15, from /<>/include/BALL/QSAR/QSARData.h:32: /usr/include/eigen3/Eigen/src/Core/Solve.h: In constructor ‘Eigen::internal::evaluator >::evaluator(const SolveType&) [with Decomposition = Eigen::SVDBase, 2> >; RhsType = Eigen::Transpose >]’: /usr/include/eigen3/Eigen/src/Core/Solve.h:127:28: note: parameter passing for argument of type ‘const Eigen::Transpose >’ changed in GCC 7.1 127 | solve.dec()._solve_impl(solve.rhs(), m_result); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ In constructor ‘Eigen::internal::evaluator >::evaluator(const SolveType&) [with Decomposition = Eigen::SVDBase, 2> >; RhsType = Eigen::Transpose >]’, inlined from ‘Eigen::internal::evaluator::evaluator(const T&) [with T = Eigen::Solve, 2> >, Eigen::Transpose > >]’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:104:54, inlined from ‘Eigen::internal::unary_evaluator, Eigen::internal::IndexBased>::unary_evaluator(const XprType&) [with ArgType = const Eigen::Solve, 2> >, Eigen::Transpose > >; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = false]’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:1106:7, inlined from ‘Eigen::internal::block_evaluator::block_evaluator(const XprType&) [with ArgType = const Eigen::Solve, 2> >, Eigen::Transpose > >; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = false]’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:1094:37, inlined from ‘Eigen::internal::evaluator >::evaluator(const XprType&) [with ArgType = const Eigen::Solve, 2> >, Eigen::Transpose > >; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = false]’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:1079:72, inlined from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::Block, 2> >, Eigen::Transpose > >, -1, 1, false>; Functor = assign_op]’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:774:20, inlined from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::Block, 2> >, Eigen::Transpose > >, -1, 1, false>; Functor = Eigen::internal::assign_op; Weak = void]’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:954:31, inlined from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Block, 2> >, Eigen::Transpose > >, -1, 1, false>; Func = assign_op]’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49, inlined from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, 2> >, Eigen::Transpose > >, -1, 1, false>; Derived = Eigen::Matrix]’ at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:797:41, inlined from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Block, 2> >, Eigen::Transpose > >, -1, 1, false>; OtherDerived = Eigen::Block, 2> >, Eigen::Transpose > >, -1, 1, false>; Derived = Eigen::Matrix]’ at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:883:25, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Block, 2> >, Eigen::Transpose > >, -1, 1, false>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:332:31, inlined from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block, -1, 1, true>; Lhs = Eigen::Matrix; Rhs = const Eigen::Block, 2> >, Eigen::Transpose > >, -1, 1, false>]’ at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:384:15, inlined from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Solve, 2> >, Eigen::Transpose > >]’ at /usr/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:479:24: /usr/include/eigen3/Eigen/src/Core/Solve.h:127:28: note: parameter passing for argument of type ‘const Eigen::Transpose >’ changed in GCC 7.1 127 | solve.dec()._solve_impl(solve.rhs(), m_result); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ In static member function ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::SVDBase, 2> >; RhsType = Eigen::Transpose >; Scalar = double]’, inlined from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 2> >, Eigen::Transpose > >; Func = assign_op]’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49, inlined from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 2> >, Eigen::Transpose > >; Derived = Eigen::Matrix]’ at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:797:41, inlined from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Solve, 2> >, Eigen::Transpose > >; OtherDerived = Eigen::Solve, 2> >, Eigen::Transpose > >; Derived = Eigen::Matrix]’ at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:883:25, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve, 2> >, Eigen::Transpose > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:332:31, inlined from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Block, 1, -1, false>; Lhs = const Eigen::Block, 1, -1, false>; Rhs = Eigen::Solve, 2> >, Eigen::Transpose > >]’ at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:384:15, inlined from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Solve, 2> >, Eigen::Transpose > >]’ at /usr/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:486:24: /usr/include/eigen3/Eigen/src/Core/Solve.h:147:26: note: parameter passing for argument of type ‘const Eigen::Transpose >’ changed in GCC 7.1 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ In static member function ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::SVDBase, 2> >; RhsType = Eigen::Transpose >; Scalar = double]’, inlined from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 2> >, Eigen::Transpose > >; Func = assign_op]’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49, inlined from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 2> >, Eigen::Transpose > >; Derived = Eigen::Matrix]’ at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:797:41, inlined from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 2> >, Eigen::Transpose > >; Derived = Eigen::Matrix]’ at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:594:19, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Solve, 2> >, Eigen::Transpose > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:423:29, inlined from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Solve, 2> >, Eigen::Transpose > >]’ at /usr/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:490:69: /usr/include/eigen3/Eigen/src/Core/Solve.h:147:26: note: parameter passing for argument of type ‘const Eigen::Transpose >’ changed in GCC 7.1 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ In static member function ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; DecType = Eigen::SVDBase, 2> >; RhsType = Eigen::Transpose >; Scalar = double]’, inlined from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Solve, 2> >, Eigen::Transpose > >; Func = assign_op]’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49, inlined from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Solve, 2> >, Eigen::Transpose > >; Derived = Eigen::Matrix]’ at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:797:41, inlined from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Solve, 2> >, Eigen::Transpose > >; OtherDerived = Eigen::Solve, 2> >, Eigen::Transpose > >; Derived = Eigen::Matrix]’ at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:883:25, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve, 2> >, Eigen::Transpose > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:332:31, inlined from ‘Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::product_evaluator(const XprType&) [with Lhs = Eigen::Matrix; Rhs = Eigen::Solve, 2> >, Eigen::Transpose > >; int ProductTag = 8]’ at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:501:7, inlined from ‘Eigen::internal::evaluator >::evaluator(const XprType&) [with Lhs = Eigen::Matrix; Rhs = Eigen::Solve, 2> >, Eigen::Transpose > >; int Options = 1]’ at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:35:90, inlined from ‘void Eigen::internal::call_restricted_packet_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 2> >, Eigen::Transpose > >, 1>; Func = assign_op]’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:904:22, inlined from ‘static void Eigen::internal::generic_product_impl::eval_dynamic_impl(Dst&, const LhsT&, const RhsT&, const Func&, const Scalar&, Eigen::internal::false_type) [with Dst = Eigen::Matrix; LhsT = Eigen::Matrix; RhsT = Eigen::Solve, 2> >, Eigen::Transpose > >; Func = Eigen::internal::assign_op; Scalar = double; Lhs = Eigen::Matrix; Rhs = Eigen::Solve, 2> >, Eigen::Transpose > >]’ at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:462:47, inlined from ‘static void Eigen::internal::generic_product_impl::eval_dynamic(Dst&, const Lhs&, const Rhs&, const Func&) [with Dst = Eigen::Matrix; Func = Eigen::internal::assign_op; Lhs = Eigen::Matrix; Rhs = Eigen::Solve, 2> >, Eigen::Transpose > >]’ at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:446:22, inlined from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Solve, 2> >, Eigen::Transpose > >]’ at /usr/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:441:32, inlined from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Solve, 2> >, Eigen::Transpose > >]’ at /usr/include/eigen3/Eigen/src/Core/products/GeneralMatrixMatrix.h:432:15, inlined from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Solve, 2> >, Eigen::Transpose > >; int Options = 0; Scalar = double]’ at /usr/include/eigen3/Eigen/src/Core/ProductEvaluators.h:148:43, inlined from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 2> >, Eigen::Transpose > >, 0>; Func = assign_op]’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49, inlined from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 2> >, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:797:41, inlined from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::Solve, 2> >, Eigen::Transpose > >, 0>; OtherDerived = Eigen::Product, Eigen::Solve, 2> >, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:883:25, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Solve, 2> >, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:332:31, inlined from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if::value, void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 2> >, Eigen::Transpose > >, 0>; Func = assign_op]’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:850:41, inlined from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Solve, 2> >, Eigen::Transpose > >, 0>]’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:836:18, inlined from ‘Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 2> >, Eigen::Transpose > >, 0>; Derived = Eigen::Matrix]’ at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:779:32, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Solve, 2> >, Eigen::Transpose > >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:225:24, inlined from ‘virtual void BALL::QSAR::PLSModel::train()’ at /<>/source/QSAR/plsModel.C:107:138: /usr/include/eigen3/Eigen/src/Core/Solve.h:147:26: note: parameter passing for argument of type ‘Eigen::Transpose >’ changed in GCC 7.1 147 | src.dec()._solve_impl(src.rhs(), dst); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/QSAR/rrModel.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/QSAR/rrModel.C.o -MF CMakeFiles/BALL.dir/source/QSAR/rrModel.C.o.d -o CMakeFiles/BALL.dir/source/QSAR/rrModel.C.o -c /<>/source/QSAR/rrModel.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/QSAR/QSARData.h:10, from /<>/include/BALL/QSAR/validation.h:10, from /<>/include/BALL/QSAR/Model.h:10, from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/QSAR/linearModel.h:10, from /<>/include/BALL/QSAR/mlrModel.h:10, from /<>/include/BALL/QSAR/rrModel.h:10, from /<>/source/QSAR/rrModel.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] /<>/include/BALL/QSAR/mlrModel.h:22:35: note: by ‘BALL::QSAR::MLRModel& BALL::QSAR::MLRModel::operator=(const BALL::QSAR::MLRModel&)’ 22 | class BALL_EXPORT MLRModel : public LinearModel | ^~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/rrModel.h:23:35: note: by ‘BALL::QSAR::RRModel& BALL::QSAR::RRModel::operator=(const BALL::QSAR::RRModel&)’ 23 | class BALL_EXPORT RRModel : public MLRModel | ^~~~~~~ /<>/source/QSAR/rrModel.C: In member function ‘virtual void BALL::QSAR::RRModel::train()’: /<>/source/QSAR/rrModel.C:70:65: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 70 | catch(BALL::Exception::GeneralException e) | ^ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/baseFunction.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/baseFunction.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/baseFunction.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/baseFunction.C.o -c /<>/source/SCORING/COMMON/baseFunction.C [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/diffScoringFunction.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/diffScoringFunction.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/diffScoringFunction.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/diffScoringFunction.C.o -c /<>/source/SCORING/COMMON/diffScoringFunction.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/diffScoringFunction.h:9, from /<>/source/SCORING/COMMON/diffScoringFunction.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/diffGridBasedScoring.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/diffGridBasedScoring.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/diffGridBasedScoring.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/diffGridBasedScoring.C.o -c /<>/source/SCORING/COMMON/diffGridBasedScoring.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/source/SCORING/COMMON/diffGridBasedScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/gridBasedScoring.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/gridBasedScoring.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/gridBasedScoring.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/gridBasedScoring.C.o -c /<>/source/SCORING/COMMON/gridBasedScoring.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/source/SCORING/COMMON/gridBasedScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/composite.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:529:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 529 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void BALL::GridBasedScoring::GridSetsResult::setup(BALL::Size)’ at /<>/source/SCORING/COMMON/gridBasedScoring.C:874:23: /usr/include/c++/13/bits/stl_vector.h:1034:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void BALL::GridBasedScoring::GridSetsResult::setup(BALL::Size)’ at /<>/source/SCORING/COMMON/gridBasedScoring.C:875:21: /usr/include/c++/13/bits/stl_vector.h:1034:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/linearBaseFunction.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/linearBaseFunction.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/linearBaseFunction.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/linearBaseFunction.C.o -c /<>/source/SCORING/COMMON/linearBaseFunction.C [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/fermiBaseFunction.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/fermiBaseFunction.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/fermiBaseFunction.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/fermiBaseFunction.C.o -c /<>/source/SCORING/COMMON/fermiBaseFunction.C [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/rescorer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/rescorer.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/rescorer.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/rescorer.C.o -c /<>/source/SCORING/COMMON/rescorer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/include/BALL/FORMAT/dockResultFile.h:9, from /<>/source/SCORING/COMMON/rescorer.C:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:11, from /<>/include/BALL/SCORING/COMMON/rescorer.h:15, from /<>/source/SCORING/COMMON/rescorer.C:3: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:12: /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/include/BALL/SYSTEM/file.h:9, from /<>/include/BALL/FORMAT/molFileFactory.h:9, from /<>/source/SCORING/COMMON/rescorer.C:1: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/SCORING/COMMON/rescorer.C:8: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h: At global scope: /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:61:46: warning: ‘virtual void BALL::Rescoring::generateScoreContributions_(BALL::Molecule*, std::vector >*, std::vector*)’ was hidden [-Woverloaded-virtual=] 61 | virtual void generateScoreContributions_(Molecule* /*mol*/, vector >* /*matrix*/, vector* /*v*/) {}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/SCORING/COMMON/rescorer.C:12: /<>/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:21:30: note: by ‘void BALL::Rescoring1D::generateScoreContributions_(std::vector >*, std::vector*)’ 21 | void generateScoreContributions_(vector >* matrix, vector* v); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMMON/rescorer.C: In static member function ‘static void BALL::Rescorer::processMultiMoleculeFile(BALL::ScoringFunction*, BALL::StructurePreparer*, BALL::String, BALL::Rescoring*, bool, double, BALL::String, BALL::GenericMolFile*, BALL::GenericMolFile*, double, bool)’: /<>/source/SCORING/COMMON/rescorer.C:390:66: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 390 | catch (BALL::Exception::GeneralException e) | ^ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoreGridSet.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/scoreGridSet.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/scoreGridSet.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/scoreGridSet.C.o -c /<>/source/SCORING/COMMON/scoreGridSet.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/scoreGridSet.h:10, from /<>/source/SCORING/COMMON/scoreGridSet.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/SCORING/COMMON/scoreGridSet.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:13: /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = BALL::Atom*; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1667:20: required from ‘void BALL::HashGrid3::dump(std::ostream&, BALL::Size) const [with Item = BALL::Atom*; std::ostream = std::basic_ostream; BALL::Size = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:1625:7: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringComponent.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringComponent.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringComponent.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringComponent.C.o -c /<>/source/SCORING/COMMON/scoringComponent.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/source/SCORING/COMMON/scoringComponent.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringFunction.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringFunction.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringFunction.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringFunction.C.o -c /<>/source/SCORING/COMMON/scoringFunction.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/source/SCORING/COMMON/scoringFunction.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:13: /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = BALL::Atom*; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1667:20: required from ‘void BALL::HashGrid3::dump(std::ostream&, BALL::Size) const [with Item = BALL::Atom*; std::ostream = std::basic_ostream; BALL::Size = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:1625:7: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringOptimizer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringOptimizer.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringOptimizer.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMMON/scoringOptimizer.C.o -c /<>/source/SCORING/COMMON/scoringOptimizer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringOptimizer.h:9, from /<>/source/SCORING/COMMON/scoringOptimizer.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10, from /<>/source/SCORING/COMMON/scoringOptimizer.C:14: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/SCORING/COMMON/scoringOptimizer.C: In member function ‘void BALL::ScoringOptimizer::evaluate(double*, double*, double*, BALL::Size*)’: /<>/source/SCORING/COMMON/scoringOptimizer.C:187:57: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 187 | catch(BALL::Exception::GeneralException e) | ^ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/aromaticRingStacking.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/aromaticRingStacking.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/aromaticRingStacking.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/aromaticRingStacking.C.o -c /<>/source/SCORING/COMPONENTS/aromaticRingStacking.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/aromaticityProcessor.h:10, from /<>/include/BALL/SCORING/COMPONENTS/aromaticRingStacking.h:9, from /<>/source/SCORING/COMPONENTS/aromaticRingStacking.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/advElectrostatic.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/advElectrostatic.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/advElectrostatic.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/advElectrostatic.C.o -c /<>/source/SCORING/COMPONENTS/advElectrostatic.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/include/BALL/SCORING/COMPONENTS/electrostatic.h:9, from /<>/include/BALL/SCORING/COMPONENTS/advElectrostatic.h:9, from /<>/source/SCORING/COMPONENTS/advElectrostatic.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fragmentationalSolvation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fragmentationalSolvation.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fragmentationalSolvation.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fragmentationalSolvation.C.o -c /<>/source/SCORING/COMPONENTS/fragmentationalSolvation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMPONENTS/solvation.h:9, from /<>/include/BALL/SCORING/COMPONENTS/fragmentationalSolvation.h:9, from /<>/source/SCORING/COMPONENTS/fragmentationalSolvation.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:13: /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = BALL::Atom*; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1667:20: required from ‘void BALL::HashGrid3::dump(std::ostream&, BALL::Size) const [with Item = BALL::Atom*; std::ostream = std::basic_ostream; BALL::Size = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:1625:7: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/burialDepth.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/burialDepth.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/burialDepth.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/burialDepth.C.o -c /<>/source/SCORING/COMPONENTS/burialDepth.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/burialDepth.h:9, from /<>/source/SCORING/COMPONENTS/burialDepth.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/buriedPolar.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/buriedPolar.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/buriedPolar.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/buriedPolar.C.o -c /<>/source/SCORING/COMPONENTS/buriedPolar.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/buriedPolar.h:9, from /<>/source/SCORING/COMPONENTS/buriedPolar.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPI.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPI.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPI.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPI.C.o -c /<>/source/SCORING/COMPONENTS/CHPI.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:20, from /<>/source/SCORING/COMPONENTS/CHPI.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPISlick.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPISlick.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPISlick.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/CHPISlick.C.o -c /<>/source/SCORING/COMPONENTS/CHPISlick.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceField.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:20, from /<>/source/SCORING/COMPONENTS/CHPISlick.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/MOLMEC/COMMON/support.h:16: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/electrostatic.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/electrostatic.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/electrostatic.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/electrostatic.C.o -c /<>/source/SCORING/COMPONENTS/electrostatic.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/include/BALL/SCORING/COMPONENTS/electrostatic.h:9, from /<>/source/SCORING/COMPONENTS/electrostatic.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fresnoTypes.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fresnoTypes.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fresnoTypes.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/fresnoTypes.C.o -c /<>/source/SCORING/COMPONENTS/fresnoTypes.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/fresnoTypes.h:9, from /<>/source/SCORING/COMPONENTS/fresnoTypes.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/SCORING/COMPONENTS/fresnoTypes.C:9: /<>/source/SCORING/COMPONENTS/fresnoTypes.C: In member function ‘virtual bool BALL::FresnoTypes::setup()’: /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/SCORING/COMPONENTS/fresnoTypes.C:310:41: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 310 | BALL_FOREACH_ATOM_BOND(*atom, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/fresnoTypes.C: In member function ‘virtual bool BALL::FresnoTypes::setup()’: /<>/include/BALL/KERNEL/forEach.h:77:49: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/SCORING/COMPONENTS/fresnoTypes.C:310:41: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 310 | BALL_FOREACH_ATOM_BOND(*atom, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/SCORING/COMPONENTS/fresnoTypes.C:365:49: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 365 | BALL_FOREACH_ATOM_BOND(*atom, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBond.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBond.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBond.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBond.C.o -c /<>/source/SCORING/COMPONENTS/hydrogenBond.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBond.h:9, from /<>/source/SCORING/COMPONENTS/hydrogenBond.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBondSlick.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBondSlick.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBondSlick.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/hydrogenBondSlick.C.o -c /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/hydrogenBondSlick.h:7, from /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C: In member function ‘virtual bool BALL::HydrogenBondSlick::setup()’: /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C:147:70: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 147 | for (lig_it = lig->beginAtom(); +lig_it; ++lig_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C:173:46: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 173 | for (lig_it = lig->beginAtom(); +lig_it; ++lig_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/hydrogenBondSlick.C:179:70: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 179 | for (rec_it = rec->beginAtom(); +rec_it; ++rec_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/lipophilic.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/lipophilic.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/lipophilic.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/lipophilic.C.o -c /<>/source/SCORING/COMPONENTS/lipophilic.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/lipophilic.h:9, from /<>/source/SCORING/COMPONENTS/lipophilic.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarity.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarity.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarity.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarity.C.o -c /<>/source/SCORING/COMPONENTS/polarity.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarity.h:9, from /<>/source/SCORING/COMPONENTS/polarity.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:13: /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = BALL::Atom*; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::Atom*; BALL::Position = unsigned int]’ /<>/source/SCORING/COMPONENTS/polarity.C:167:23: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PB.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PB.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PB.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PB.C.o -c /<>/source/SCORING/COMPONENTS/PB.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/PB.h:6, from /<>/source/SCORING/COMPONENTS/PB.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PLP.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PLP.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PLP.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/PLP.C.o -c /<>/source/SCORING/COMPONENTS/PLP.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:9, from /<>/source/SCORING/COMPONENTS/PLP.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:21: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:13: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/SCORING/COMPONENTS/PLP.h:12: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/PLP.C: In member function ‘const BALL::PLP& BALL::PLP::operator=(const BALL::PLP&)’: /<>/source/SCORING/COMPONENTS/PLP.C:147:41: warning: implicitly-declared ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ is deprecated [-Wdeprecated-copy] 147 | ForceFieldComponent::operator = (anb); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:61:17: note: because ‘BALL::ForceFieldComponent’ has user-provided ‘BALL::ForceFieldComponent::ForceFieldComponent(const BALL::ForceFieldComponent&)’ 61 | ForceFieldComponent(const ForceFieldComponent& force_field_component); | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h: In member function ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’: /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:34:27: warning: implicitly-declared ‘BALL::ScoringComponent& BALL::ScoringComponent::operator=(const BALL::ScoringComponent&)’ is deprecated [-Wdeprecated-copy] 34 | class BALL_EXPORT ForceFieldComponent : public ScoringComponent | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/SCORING/COMMON/scoringComponent.h:26:25: note: because ‘BALL::ScoringComponent’ has user-provided ‘BALL::ScoringComponent::ScoringComponent(const BALL::ScoringComponent&)’ 26 | ScoringComponent(const ScoringComponent& sc); | ^~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/PLP.C: In member function ‘const BALL::PLP& BALL::PLP::operator=(const BALL::PLP&)’: /<>/source/SCORING/COMPONENTS/PLP.C:147:41: note: synthesized method ‘BALL::ForceFieldComponent& BALL::ForceFieldComponent::operator=(const BALL::ForceFieldComponent&)’ first required here 147 | ForceFieldComponent::operator = (anb); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/rotationalEntropy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/rotationalEntropy.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/rotationalEntropy.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/rotationalEntropy.C.o -c /<>/source/SCORING/COMPONENTS/rotationalEntropy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/rotationalEntropy.h:9, from /<>/source/SCORING/COMPONENTS/rotationalEntropy.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/solvation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/solvation.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/solvation.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/solvation.C.o -c /<>/source/SCORING/COMPONENTS/solvation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMPONENTS/solvation.h:9, from /<>/source/SCORING/COMPONENTS/solvation.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/set:62, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:8: /usr/include/c++/13/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = BALL::String; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]’: /usr/include/c++/13/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/map:63, from /<>/include/BALL/SYSTEM/file.h:38, from /<>/include/BALL/FORMAT/paramFile.h:8, from /<>/include/BALL/DATATYPE/options.h:22, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:11: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:20:26: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:21:26: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:22:26: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:23:26: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:24:26: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:25:27: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:26:27: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:27:27: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:28:27: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:29:27: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:30:27: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:31:27: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:32:26: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:33:26: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:34:27: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:35:26: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:37:23: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:38:23: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:39:23: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:40:23: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:41:23: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:42:24: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:43:24: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:44:24: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:45:24: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:46:24: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:47:24: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:48:24: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:49:23: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:50:23: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:51:24: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = BALL::String; _Tp = double; _Compare = std::less; _Alloc = std::allocator >]’, inlined from ‘BALL::Solvation::Solvation(BALL::ScoringFunction&)’ at /<>/source/SCORING/COMPONENTS/solvation.C:52:23: /usr/include/c++/13/bits/stl_map.h:532:44: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 532 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 | std::forward_as_tuple(std::move(__k)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 | std::tuple<>()); | ~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/nonpolarSolvation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/nonpolarSolvation.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/nonpolarSolvation.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/nonpolarSolvation.C.o -c /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/nonpolarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C: In member function ‘virtual double BALL::NonpolarSolvation::updateScore()’: /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C:406:68: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 406 | src = getScoringFunction()->getLigand()->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C:407:41: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 407 | dst = ligand_.beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C: In member function ‘virtual double BALL::NonpolarSolvation::updateScore()’: /<>/source/SCORING/COMPONENTS/nonpolarSolvation.C:407:41: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 407 | dst = ligand_.beginAtom(); | ^ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarSolvation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarSolvation.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarSolvation.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/polarSolvation.C.o -c /<>/source/SCORING/COMPONENTS/polarSolvation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/polarSolvation.h:6, from /<>/source/SCORING/COMPONENTS/polarSolvation.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C: In member function ‘virtual double BALL::PolarSolvation::updateScore()’: /<>/source/SCORING/COMPONENTS/polarSolvation.C:261:68: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 261 | src = getScoringFunction()->getLigand()->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C:262:48: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 262 | dst = desolv_ligand_.beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C: In member function ‘virtual double BALL::PolarSolvation::updateScore()’: /<>/source/SCORING/COMPONENTS/polarSolvation.C:262:48: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 262 | dst = desolv_ligand_.beginAtom(); | ^ /<>/source/SCORING/COMPONENTS/polarSolvation.C:457:72: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 457 | it = desolv_protein_.beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C: In member function ‘bool BALL::PolarSolvation::computeFullCycle_(BALL::System&, BALL::Molecule&, BALL::Molecule&, float&)’: /<>/source/SCORING/COMPONENTS/polarSolvation.C:768:44: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 768 | for (it = ligand.beginAtom(); +it; ++it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C:795:45: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 795 | for (it = protein.beginAtom(); +it; ++it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C:832:44: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 832 | for (it = ligand.beginAtom(); +it; ++it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C:851:44: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 851 | for (it = ligand.beginAtom(); +it; ++it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C:874:45: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 874 | for (it = protein.beginAtom(); +it; ++it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/polarSolvation.C:905:39: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 905 | it = system.beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaals.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaals.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaals.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaals.C.o -c /<>/source/SCORING/COMPONENTS/vanDerWaals.C In file included from /<>/include/BALL/KERNEL/moleculeIterator.h:11, from /<>/include/BALL/KERNEL/system.h:13, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/MOLMEC/COMMON/forceFieldComponent.h:24, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:23, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaals.h:9, from /<>/source/SCORING/COMPONENTS/vanDerWaals.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/FORMAT/parameterSection.h:13, from /<>/include/BALL/MOLMEC/PARAMETER/lennardJones.h:11, from /<>/include/BALL/MOLMEC/AMBER/amberNonBonded.h:15: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaalsSlick.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaalsSlick.C.o -MF CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaalsSlick.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/COMPONENTS/vanDerWaalsSlick.C.o -c /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/scoringComponent.h:11, from /<>/include/BALL/SCORING/COMPONENTS/vanDerWaalsSlick.h:7, from /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C: In member function ‘virtual double BALL::VanDerWaalsSlick::updateScore()’: /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:658:68: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 658 | src = getScoringFunction()->getLigand()->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:659:46: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 659 | dst = vdw_ligand_->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C: In member function ‘virtual double BALL::VanDerWaalsSlick::updateScore()’: /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:659:46: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 659 | dst = vdw_ligand_->beginAtom(); | ^ /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:683:47: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 683 | it = vdw_receptor_->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/COMPONENTS/vanDerWaalsSlick.C:697:45: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 697 | it = vdw_ligand_->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring.C.o -c /<>/source/SCORING/FUNCTIONS/rescoring.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:11: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:12: /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/kernelModel.h:10, from /<>/include/BALL/QSAR/featureSelection.h:13, from /<>/source/SCORING/FUNCTIONS/rescoring.C:8: /<>/include/BALL/QSAR/nonlinearModel.h:19:35: note: by ‘BALL::QSAR::NonLinearModel& BALL::QSAR::NonLinearModel::operator=(const BALL::QSAR::NonLinearModel&)’ 19 | class BALL_EXPORT NonLinearModel : public RegressionModel | ^~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/kernelModel.h:14: /<>/include/BALL/QSAR/linearModel.h:30:46: note: by ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: warning: ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ was hidden [-Woverloaded-virtual=] 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:27:35: note: by ‘BALL::QSAR::KernelModel::operator=’ 27 | class BALL_EXPORT KernelModel : public NonLinearModel | ^~~~~~~~~~~ /<>/include/BALL/QSAR/linearModel.h:30:46: warning: ‘virtual void BALL::QSAR::LinearModel::operator=(const BALL::QSAR::LinearModel&)’ was hidden [-Woverloaded-virtual=] 30 | virtual void operator=(const LinearModel& m); | ^~~~~~~~ In file included from /<>/source/SCORING/FUNCTIONS/rescoring.C:10: /<>/include/BALL/QSAR/plsModel.h:28:35: note: by ‘BALL::QSAR::PLSModel& BALL::QSAR::PLSModel::operator=(const BALL::QSAR::PLSModel&)’ 28 | class BALL_EXPORT PLSModel : public LinearModel, public LatentVariableModel | ^~~~~~~~ /<>/include/BALL/QSAR/kernelModel.h:49:38: warning: ‘virtual void BALL::QSAR::KernelModel::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 49 | void operator=(const Model& m); | ^~~~~~~~ In file included from /<>/source/SCORING/FUNCTIONS/rescoring.C:11: /<>/include/BALL/QSAR/kplsModel.h:26:35: note: by ‘BALL::QSAR::KPLSModel& BALL::QSAR::KPLSModel::operator=(const BALL::QSAR::KPLSModel&)’ 26 | class BALL_EXPORT KPLSModel : public KernelModel, public LatentVariableModel | ^~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/composite.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘void BALL::Rescoring::addScoreContributions(BALL::Molecule*)’ at /<>/source/SCORING/FUNCTIONS/rescoring.C:85:24: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void BALL::Rescoring::addScoreContributions(BALL::Molecule*)’ at /<>/source/SCORING/FUNCTIONS/rescoring.C:107:41: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual double BALL::Rescoring::rescore(BALL::Molecule*)’ at /<>/source/SCORING/FUNCTIONS/rescoring.C:355:35: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘virtual double BALL::Rescoring::rescore(BALL::Molecule*)’ at /<>/source/SCORING/FUNCTIONS/rescoring.C:356:38: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring1D.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring1D.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring1D.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring1D.C.o -c /<>/source/SCORING/FUNCTIONS/rescoring1D.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring1D.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:11: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:12: /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:61:46: warning: ‘virtual void BALL::Rescoring::generateScoreContributions_(BALL::Molecule*, std::vector >*, std::vector*)’ was hidden [-Woverloaded-virtual=] 61 | virtual void generateScoreContributions_(Molecule* /*mol*/, vector >* /*matrix*/, vector* /*v*/) {}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/SCORING/FUNCTIONS/rescoring1D.h:21:30: note: by ‘void BALL::Rescoring1D::generateScoreContributions_(std::vector >*, std::vector*)’ 21 | void generateScoreContributions_(vector >* matrix, vector* v); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/composite.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void BALL::Rescoring1D::generateScoreContributions_(std::vector >*, std::vector*)’ at /<>/source/SCORING/FUNCTIONS/rescoring1D.C:59:36: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘void BALL::Rescoring1D::generateScoreContributions_(std::vector >*, std::vector*)’ at /<>/source/SCORING/FUNCTIONS/rescoring1D.C:63:18: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring3D.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring3D.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring3D.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring3D.C.o -c /<>/source/SCORING/FUNCTIONS/rescoring3D.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring3D.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:11: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:12: /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SCORING/FUNCTIONS/rescoring3D.C: In member function ‘std::__cxx11::list*> > BALL::Rescoring3D::generateRegularData3DGrids()’: /<>/source/SCORING/FUNCTIONS/rescoring3D.C:112:30: warning: comparison of integer expressions of different signedness: ‘BALL::Size’ {aka ‘unsigned int’} and ‘Eigen::Index’ {aka ‘int’} [-Wsign-compare] 112 | if (sizeX_*sizeY_*sizeZ_ < coefficients->rows()) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:13: /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = BALL::Atom*; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1667:20: required from ‘void BALL::HashGrid3::dump(std::ostream&, BALL::Size) const [with Item = BALL::Atom*; std::ostream = std::basic_ostream; BALL::Size = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:1625:7: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/composite.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:529:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 529 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual void BALL::Rescoring3D::generateAtomScoreContributions_(const BALL::Atom*, std::vector&)’ at /<>/source/SCORING/FUNCTIONS/rescoring3D.C:39:29, inlined from ‘virtual void BALL::Rescoring3D::generateAtomScoreContributions_(const BALL::Atom*, std::vector&)’ at /<>/source/SCORING/FUNCTIONS/rescoring3D.C:35:6: /usr/include/c++/13/bits/stl_vector.h:1034:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual void BALL::Rescoring3D::generateAtomScoreContributions_(const BALL::Atom*, std::vector&)’ at /<>/source/SCORING/FUNCTIONS/rescoring3D.C:42:56: /usr/include/c++/13/bits/stl_vector.h:1034:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual void BALL::Rescoring3D::generateAtomScoreContributions_(const BALL::Atom*, std::vector&)’ at /<>/source/SCORING/FUNCTIONS/rescoring3D.C:39:29, inlined from ‘virtual void BALL::Rescoring3D::generateAtomScoreContributions_(const BALL::Atom*, std::vector&)’ at /<>/source/SCORING/FUNCTIONS/rescoring3D.C:35:6, inlined from ‘virtual void BALL::Rescoring3D::generateScoreContributions_(BALL::Molecule*, std::vector >*, std::vector*)’ at /<>/source/SCORING/FUNCTIONS/rescoring3D.C:81:48: /usr/include/c++/13/bits/stl_vector.h:1034:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual void BALL::Rescoring3D::generateAtomScoreContributions_(const BALL::Atom*, std::vector&)’ at /<>/source/SCORING/FUNCTIONS/rescoring3D.C:39:29, inlined from ‘virtual void BALL::Rescoring3D::generateAtomScoreContributions_(const BALL::Atom*, std::vector&)’ at /<>/source/SCORING/FUNCTIONS/rescoring3D.C:35:6, inlined from ‘virtual void BALL::Rescoring3D::generateScoreContributions_(BALL::Molecule*, std::vector >*, std::vector*)’ at /<>/source/SCORING/FUNCTIONS/rescoring3D.C:86:52: /usr/include/c++/13/bits/stl_vector.h:1034:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual void BALL::Rescoring3D::generateAtomScoreContributions_(const BALL::Atom*, std::vector&)’ at /<>/source/SCORING/FUNCTIONS/rescoring3D.C:42:56, inlined from ‘virtual void BALL::Rescoring3D::generateScoreContributions_(BALL::Molecule*, std::vector >*, std::vector*)’ at /<>/source/SCORING/FUNCTIONS/rescoring3D.C:86:52: /usr/include/c++/13/bits/stl_vector.h:1034:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual void BALL::Rescoring3D::generateScoreContributions_(BALL::Molecule*, std::vector >*, std::vector*)’ at /<>/source/SCORING/FUNCTIONS/rescoring3D.C:96:37: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual void BALL::Rescoring3D::generateScoreContributions_(BALL::Molecule*, std::vector >*, std::vector*)’ at /<>/source/SCORING/FUNCTIONS/rescoring3D.C:92:53: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring4D.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring4D.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring4D.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/rescoring4D.C.o -c /<>/source/SCORING/FUNCTIONS/rescoring4D.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring3D.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring4D.h:9, from /<>/source/SCORING/FUNCTIONS/rescoring4D.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:24, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:11: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/connectivityDescriptors.h:10, from /<>/include/BALL/QSAR/QSARData.h:25: /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:48:30: note: by ‘BALL::ZagrebIndex& BALL::ZagrebIndex::operator=(const BALL::ZagrebIndex&)’ 48 | ZagrebIndex& operator = (const ZagrebIndex& zi); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityBase.h:59:43: warning: ‘virtual BALL::ConnectivityBase& BALL::ConnectivityBase::operator=(const BALL::ConnectivityBase&)’ was hidden [-Woverloaded-virtual=] 59 | virtual ConnectivityBase& operator = (const ConnectivityBase& cb); | ^~~~~~~~ /<>/include/BALL/QSAR/connectivityDescriptors.h:93:32: note: by ‘BALL::BalabanIndexJ& BALL::BalabanIndexJ::operator=(const BALL::BalabanIndexJ&)’ 93 | BalabanIndexJ& operator = (const BalabanIndexJ& bij); | ^~~~~~~~ In file included from /<>/include/BALL/QSAR/regressionModel.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/rescoring.h:12: /<>/include/BALL/QSAR/Model.h:48:46: warning: ‘virtual void BALL::QSAR::Model::operator=(const BALL::QSAR::Model&)’ was hidden [-Woverloaded-virtual=] 48 | virtual void operator=(const Model& m); | ^~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:34:46: note: by ‘virtual void BALL::QSAR::RegressionModel::operator=(const BALL::QSAR::RegressionModel&)’ 34 | virtual void operator=(const RegressionModel& m); | ^~~~~~~~ /<>/include/BALL/QSAR/Model.h:195:46: warning: ‘virtual void BALL::QSAR::Model::readDescriptorInformationFromFile(std::ifstream&, int, bool)’ was hidden [-Woverloaded-virtual=] 195 | virtual void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/QSAR/regressionModel.h:79:38: note: by ‘void BALL::QSAR::RegressionModel::readDescriptorInformationFromFile(std::ifstream&, int, bool, int)’ 79 | void readDescriptorInformationFromFile(std::ifstream& in, int no_descriptors, bool transformation, int no_coefficients); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/composite.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:529:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 529 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual void BALL::Rescoring4D::generateAtomScoreContributions_(const BALL::Atom*, std::vector&)’ at /<>/source/SCORING/FUNCTIONS/rescoring4D.C:32:25: /usr/include/c++/13/bits/stl_vector.h:1034:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, inlined from ‘virtual void BALL::Rescoring4D::generateAtomScoreContributions_(const BALL::Atom*, std::vector&)’ at /<>/source/SCORING/FUNCTIONS/rescoring4D.C:35:55: /usr/include/c++/13/bits/stl_vector.h:1034:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/amberEvaluation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/amberEvaluation.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/amberEvaluation.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/amberEvaluation.C.o -c /<>/source/SCORING/FUNCTIONS/amberEvaluation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/amberEvaluation.h:13, from /<>/source/SCORING/FUNCTIONS/amberEvaluation.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/energeticEvaluation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/energeticEvaluation.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/energeticEvaluation.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/energeticEvaluation.C.o -c /<>/source/SCORING/FUNCTIONS/energeticEvaluation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/energeticEvaluation.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/forceFieldEvaluation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/forceFieldEvaluation.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/forceFieldEvaluation.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/forceFieldEvaluation.C.o -c /<>/source/SCORING/FUNCTIONS/forceFieldEvaluation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/energeticEvaluation.h:8, from /<>/include/BALL/SCORING/FUNCTIONS/forceFieldEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/forceFieldEvaluation.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedMM.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedMM.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedMM.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedMM.C.o -c /<>/source/SCORING/FUNCTIONS/gridedMM.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedMM.h:9, from /<>/source/SCORING/FUNCTIONS/gridedMM.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/MMScoring.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/MMScoring.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/MMScoring.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/MMScoring.C.o -c /<>/source/SCORING/FUNCTIONS/MMScoring.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/diffScoringFunction.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/MMScoring.h:9, from /<>/source/SCORING/FUNCTIONS/MMScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedPLP.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedPLP.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedPLP.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/gridedPLP.C.o -c /<>/source/SCORING/FUNCTIONS/gridedPLP.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/COMMON/gridBasedScoring.h:9, from /<>/include/BALL/SCORING/COMMON/diffGridBasedScoring.h:9, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:9, from /<>/source/SCORING/FUNCTIONS/gridedPLP.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PLPScoring.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PLPScoring.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PLPScoring.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PLPScoring.C.o -c /<>/source/SCORING/FUNCTIONS/PLPScoring.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PLPScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/PLPScoring.h:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/randomEvaluation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/randomEvaluation.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/randomEvaluation.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/randomEvaluation.C.o -c /<>/source/SCORING/FUNCTIONS/randomEvaluation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/SCORING/FUNCTIONS/randomEvaluation.h:8, from /<>/source/SCORING/FUNCTIONS/randomEvaluation.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PBScoring.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PBScoring.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PBScoring.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/PBScoring.C.o -c /<>/source/SCORING/FUNCTIONS/PBScoring.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/PBScoring.h:9, from /<>/source/SCORING/FUNCTIONS/PBScoring.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickEnergy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickEnergy.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickEnergy.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickEnergy.C.o -c /<>/source/SCORING/FUNCTIONS/slickEnergy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickEnergy.h:11, from /<>/source/SCORING/FUNCTIONS/slickEnergy.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickScore.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickScore.C.o -MF CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickScore.C.o.d -o CMakeFiles/BALL.dir/source/SCORING/FUNCTIONS/slickScore.C.o -c /<>/source/SCORING/FUNCTIONS/slickScore.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/SCORING/FUNCTIONS/slickScore.h:11, from /<>/source/SCORING/FUNCTIONS/slickScore.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 68%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/claverieParameter.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/claverieParameter.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/claverieParameter.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/claverieParameter.C.o -c /<>/source/SOLVATION/claverieParameter.C [ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/electrostaticPotentialCalculator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/electrostaticPotentialCalculator.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/electrostaticPotentialCalculator.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/electrostaticPotentialCalculator.C.o -c /<>/source/SOLVATION/electrostaticPotentialCalculator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/electrostaticPotentialCalculator.h:11, from /<>/source/SOLVATION/electrostaticPotentialCalculator.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SOLVATION/electrostaticPotentialCalculator.C: In member function ‘float BALL::ElectrostaticPotentialCalculator::operator()(const BALL::Vector3&)’: /<>/source/SOLVATION/electrostaticPotentialCalculator.C:64:52: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atIt=mySys_.beginAtom();+atIt;++atIt) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SOLVATION/electrostaticPotentialCalculator.C: In member function ‘float BALL::ElectrostaticPotentialCalculator::operator()(const BALL::Vector3&)’: /<>/source/SOLVATION/electrostaticPotentialCalculator.C:64:52: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atIt=mySys_.beginAtom();+atIt;++atIt) | ^ /<>/source/SOLVATION/electrostaticPotentialCalculator.C:83:52: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 83 | for (atIt=mySys_.beginAtom();+atIt;++atIt) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/generalizedBornCase.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/generalizedBornCase.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/generalizedBornCase.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/generalizedBornCase.C.o -c /<>/source/SOLVATION/generalizedBornCase.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/SOLVATION/generalizedBornCase.h:19, from /<>/source/SOLVATION/generalizedBornCase.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SOLVATION/generalizedBornCase.C: In member function ‘bool BALL::GeneralizedBornModel::setup(const BALL::AtomContainer&)’: /<>/source/SOLVATION/generalizedBornCase.C:235:43: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 235 | for (it1 = ac_->beginAtom(); +it1; ++it1) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/molecularSurfaceGrid.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/molecularSurfaceGrid.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/molecularSurfaceGrid.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/molecularSurfaceGrid.C.o -c /<>/source/SOLVATION/molecularSurfaceGrid.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/molecularSurfaceGrid.h:19, from /<>/source/SOLVATION/molecularSurfaceGrid.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/SOLVATION/molecularSurfaceGrid.h:15: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/SOLVATION/molecularSurfaceGrid.C:8: /<>/source/SOLVATION/molecularSurfaceGrid.C: In function ‘BALL::TRegularData3D* BALL::calculateSESGrid(const Vector3&, const Vector3&, float, const System&, float)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/SOLVATION/molecularSurfaceGrid.C:165:17: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 165 | BALL_FOREACH_ATOM(system, atom_iterator) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SOLVATION/molecularSurfaceGrid.C: In function ‘BALL::TRegularData3D* BALL::calculateSASGrid(const Vector3&, const Vector3&, float, const System&, float)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/SOLVATION/molecularSurfaceGrid.C:358:17: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 358 | BALL_FOREACH_ATOM(system, atom_iterator) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/ooiEnergy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/ooiEnergy.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/ooiEnergy.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/ooiEnergy.C.o -c /<>/source/SOLVATION/ooiEnergy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/SOLVATION/ooiEnergy.C:13: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/expressionPredicate.h:11, from /<>/include/BALL/KERNEL/expressionTree.h:11, from /<>/include/BALL/KERNEL/expressionParser.h:9, from /<>/include/BALL/KERNEL/expression.h:13, from /<>/include/BALL/MOLMEC/COMMON/ruleEvaluator.h:17, from /<>/include/BALL/MOLMEC/COMMON/ruleProcessor.h:13, from /<>/include/BALL/MOLMEC/COMMON/typeRuleProcessor.h:13, from /<>/include/BALL/SOLVATION/ooiEnergy.h:15, from /<>/source/SOLVATION/ooiEnergy.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SOLVATION/ooiEnergy.C: In function ‘double BALL::calculateOoiEnergy(AtomContainer&)’: /<>/source/SOLVATION/ooiEnergy.C:277:48: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 277 | for (atom_it = atoms.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SOLVATION/ooiEnergy.C: In function ‘double BALL::calculateOoiEnergy(AtomContainer&)’: /<>/source/SOLVATION/ooiEnergy.C:277:48: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 277 | for (atom_it = atoms.beginAtom(); +atom_it; ++atom_it) | ^ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/PCMCavFreeEnergyProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/PCMCavFreeEnergyProcessor.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/PCMCavFreeEnergyProcessor.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/PCMCavFreeEnergyProcessor.C.o -c /<>/source/SOLVATION/PCMCavFreeEnergyProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/PCMCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/PCMCavFreeEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pierottiCavFreeEnergyProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/pierottiCavFreeEnergyProcessor.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/pierottiCavFreeEnergyProcessor.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/pierottiCavFreeEnergyProcessor.C.o -c /<>/source/SOLVATION/pierottiCavFreeEnergyProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pierottiCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/pierottiCavFreeEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pair6_12InteractionEnergyProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/pair6_12InteractionEnergyProcessor.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/pair6_12InteractionEnergyProcessor.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/pair6_12InteractionEnergyProcessor.C.o -c /<>/source/SOLVATION/pair6_12InteractionEnergyProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pair6_12InteractionEnergyProcessor.h:23, from /<>/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:14: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/surface.h:9, from /<>/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SOLVATION/pair6_12InteractionEnergyProcessor.C: In member function ‘virtual bool BALL::Pair6_12InteractionEnergyProcessor::finish()’: /<>/source/SOLVATION/pair6_12InteractionEnergyProcessor.C:406:69: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 406 | for (solute_iterator = fragment_->beginAtom(); +solute_iterator; | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pair6_12RDFIntegrator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/pair6_12RDFIntegrator.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/pair6_12RDFIntegrator.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/pair6_12RDFIntegrator.C.o -c /<>/source/SOLVATION/pair6_12RDFIntegrator.C [ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pairExpInteractionEnergyProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/pairExpInteractionEnergyProcessor.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/pairExpInteractionEnergyProcessor.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/pairExpInteractionEnergyProcessor.C.o -c /<>/source/SOLVATION/pairExpInteractionEnergyProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/pairExpInteractionEnergyProcessor.h:27, from /<>/source/SOLVATION/pairExpInteractionEnergyProcessor.C:12: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/surface.h:9, from /<>/source/SOLVATION/pairExpInteractionEnergyProcessor.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/SOLVATION/pairExpInteractionEnergyProcessor.C: In member function ‘virtual bool BALL::PairExpInteractionEnergyProcessor::finish()’: /<>/source/SOLVATION/pairExpInteractionEnergyProcessor.C:315:69: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 315 | for (solute_iterator = fragment_->beginAtom(); +solute_iterator; | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/pairExpRDFIntegrator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/pairExpRDFIntegrator.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/pairExpRDFIntegrator.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/pairExpRDFIntegrator.C.o -c /<>/source/SOLVATION/pairExpRDFIntegrator.C [ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/poissonBoltzmann.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/poissonBoltzmann.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/poissonBoltzmann.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/poissonBoltzmann.C.o -c /<>/source/SOLVATION/poissonBoltzmann.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:21, from /<>/source/SOLVATION/poissonBoltzmann.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:17: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/SOLVATION/poissonBoltzmann.C:15: /<>/source/SOLVATION/poissonBoltzmann.C: In member function ‘bool BALL::FDPB::setupAtomArray(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/SOLVATION/poissonBoltzmann.C:267:17: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 267 | BALL_FOREACH_ATOM(system, atom_iterator) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/SOLVATION/poissonBoltzmann.C: In member function ‘bool BALL::FDPB::setupAtomArray(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/SOLVATION/poissonBoltzmann.C:267:17: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 267 | BALL_FOREACH_ATOM(system, atom_iterator) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/DATATYPE/hashSet.h:17, from /<>/include/BALL/CONCEPT/persistenceManager.h:21: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:237:76: required from ‘BALL::ForwardIterator& BALL::ForwardIterator::operator=(const BALL::ForwardIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/source/SOLVATION/poissonBoltzmann.C:571:35: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared ‘BALL::HashGridBox3 >::BoxIteratorTraits& BALL::HashGridBox3 >::BoxIteratorTraits::operator=(const BALL::HashGridBox3 >::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/source/SOLVATION/poissonBoltzmann.C:13: /<>/include/BALL/DATATYPE/hashGrid.h:209:25: note: because ‘BALL::HashGridBox3 >::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = BALL::TVector4]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = BALL::TVector4; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::TVector4; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:563:21: required from ‘void BALL::HashGridBox3::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::TVector4; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:206:13: required from ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3&) [with Item = BALL::TVector4]’ /<>/include/BALL/CONCEPT/baseIterator.h:190:6: required from ‘BALL::BaseIterator::BaseIterator(const Container&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:128:67: required from ‘BALL::ConstForwardIterator::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:298:20: required from ‘BALL::ForwardIterator::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:309:19: required from ‘static BALL::ForwardIterator BALL::ForwardIterator::begin(const Container&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/DATATYPE/hashGrid.h:332:29: required from ‘BALL::HashGridBox3::BoxIterator BALL::HashGridBox3::beginBox() [with Item = BALL::TVector4; BoxIterator = BALL::ForwardIterator >, BALL::HashGridBox3 >, unsigned int, BALL::HashGridBox3 >::BoxIteratorTraits>]’ /<>/source/SOLVATION/poissonBoltzmann.C:571:34: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/reissCavFreeEnergyProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/reissCavFreeEnergyProcessor.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/reissCavFreeEnergyProcessor.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/reissCavFreeEnergyProcessor.C.o -c /<>/source/SOLVATION/reissCavFreeEnergyProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/reissCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/reissCavFreeEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/solventDescriptor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/solventDescriptor.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/solventDescriptor.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/solventDescriptor.C.o -c /<>/source/SOLVATION/solventDescriptor.C [ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/solventParameter.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/solventParameter.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/solventParameter.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/solventParameter.C.o -c /<>/source/SOLVATION/solventParameter.C [ 75%] Building CXX object CMakeFiles/BALL.dir/source/SOLVATION/uhligCavFreeEnergyProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SOLVATION/uhligCavFreeEnergyProcessor.C.o -MF CMakeFiles/BALL.dir/source/SOLVATION/uhligCavFreeEnergyProcessor.C.o.d -o CMakeFiles/BALL.dir/source/SOLVATION/uhligCavFreeEnergyProcessor.C.o -c /<>/source/SOLVATION/uhligCavFreeEnergyProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/ENERGY/energyProcessor.h:15, from /<>/include/BALL/SOLVATION/uhligCavFreeEnergyProcessor.h:15, from /<>/source/SOLVATION/uhligCavFreeEnergyProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C.o -c /<>/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/AStarBondOrderStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C.o -c /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:3: /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C: In member function ‘bool BALL::BondOrderAssignment::apply()’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:64:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 64 | BALL_FOREACH_BOND(*ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C: In member function ‘bool BALL::BondOrderAssignment::apply()’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:64:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 64 | BALL_FOREACH_BOND(*ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:64:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 64 | BALL_FOREACH_BOND(*ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C: In member function ‘bool BALL::BondOrderAssignment::apply()’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:64:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 64 | BALL_FOREACH_BOND(*ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:87:46: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 87 | a_it = ac->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:88:48: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 88 | b_it = a_it->beginBond(); | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignment.C:89:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 89 | BALL_FOREACH_ATOM(*ac, a_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C.o -c /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C.o -c /<>/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/branchAndBoundBondOrderStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C.o -c /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.h:13, from /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function ‘virtual bool BALL::FPTBondOrderStrategy::readOptions(const BALL::Options&)’: /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:30:63: warning: unused parameter ‘options’ [-Wunused-parameter] 30 | bool FPTBondOrderStrategy::readOptions(const Options& options) | ~~~~~~~~~~~~~~~^~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function ‘virtual void BALL::FPTBondOrderStrategy::init()’: /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:69:27: warning: unused variable ‘result’ [-Wunused-variable] 69 | Penalty result = bond_assignments[i]->compute(); | ^~~~~~ In file included from /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:3: /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function ‘virtual boost::shared_ptr BALL::FPTBondOrderStrategy::computeNextSolution()’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:104:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 104 | BALL_FOREACH_BOND(*abop->getAtomContainer(), at_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function ‘virtual boost::shared_ptr BALL::FPTBondOrderStrategy::computeNextSolution()’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:104:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 104 | BALL_FOREACH_BOND(*abop->getAtomContainer(), at_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:104:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 104 | BALL_FOREACH_BOND(*abop->getAtomContainer(), at_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function ‘virtual boost::shared_ptr BALL::FPTBondOrderStrategy::computeNextSolution()’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:104:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 104 | BALL_FOREACH_BOND(*abop->getAtomContainer(), at_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function ‘void BALL::FPTBondOrderStrategy::FPTBondOrderAssignment_::computeJoinBag(BALL::FPTBondOrderStrategy::TreeDecompositionBag&, BALL::FPTBondOrderStrategy::DPTable_&, BALL::FPTBondOrderStrategy::DPTable_&, BALL::FPTBondOrderStrategy::AdditionalBagProperties_&)’: /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:853:60: warning: implicitly-declared ‘BALL::FPTBondOrderStrategy::DPConfig_::DPConfig_(const BALL::FPTBondOrderStrategy::DPConfig_&)’ is deprecated [-Wdeprecated-copy] 853 | DPConfig_ config = *match->first; | ^~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:245:42: note: because ‘BALL::FPTBondOrderStrategy::DPConfig_’ has user-provided ‘BALL::FPTBondOrderStrategy::DPConfig_& BALL::FPTBondOrderStrategy::DPConfig_::operator=(const BALL::FPTBondOrderStrategy::DPConfig_&)’ 245 | FPTBondOrderStrategy::DPConfig_& FPTBondOrderStrategy::DPConfig_::operator = (DPConfig_ const& copy) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In copy constructor ‘BALL::FPTBondOrderStrategy::BackTrackingState_::BackTrackingState_(const BALL::FPTBondOrderStrategy::BackTrackingState_&)’: /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1211:19: warning: implicitly-declared ‘BALL::FPTBondOrderStrategy::DPConfig_::DPConfig_(const BALL::FPTBondOrderStrategy::DPConfig_&)’ is deprecated [-Wdeprecated-copy] 1211 | config(other.config), | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:245:42: note: because ‘BALL::FPTBondOrderStrategy::DPConfig_’ has user-provided ‘BALL::FPTBondOrderStrategy::DPConfig_& BALL::FPTBondOrderStrategy::DPConfig_::operator=(const BALL::FPTBondOrderStrategy::DPConfig_&)’ 245 | FPTBondOrderStrategy::DPConfig_& FPTBondOrderStrategy::DPConfig_::operator = (DPConfig_ const& copy) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function ‘void BALL::FPTBondOrderStrategy::DPBackTracking_::visitIntroduce(BALL::FPTBondOrderStrategy::BackTrackingState_&, TreeDecompositionBag&, BALL::FPTBondOrderStrategy::DPTable_&)’: /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1525:55: warning: implicitly-declared ‘BALL::FPTBondOrderStrategy::DPConfig_::DPConfig_(const BALL::FPTBondOrderStrategy::DPConfig_&)’ is deprecated [-Wdeprecated-copy] 1525 | DPConfig_ antecessor = table.begin()->first; | ^~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:245:42: note: because ‘BALL::FPTBondOrderStrategy::DPConfig_’ has user-provided ‘BALL::FPTBondOrderStrategy::DPConfig_& BALL::FPTBondOrderStrategy::DPConfig_::operator=(const BALL::FPTBondOrderStrategy::DPConfig_&)’ 245 | FPTBondOrderStrategy::DPConfig_& FPTBondOrderStrategy::DPConfig_::operator = (DPConfig_ const& copy) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C: In member function ‘void BALL::FPTBondOrderStrategy::DPBackTracking_::visitForget(BALL::FPTBondOrderStrategy::BackTrackingState_&, TreeDecompositionBag&, BALL::FPTBondOrderStrategy::DPTable_&)’: /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:1722:40: warning: implicitly-declared ‘BALL::FPTBondOrderStrategy::DPConfig_::DPConfig_(const BALL::FPTBondOrderStrategy::DPConfig_&)’ is deprecated [-Wdeprecated-copy] 1722 | DPConfig_ test_entry = successor; | ^~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/FPTBondOrderStrategy.C:245:42: note: because ‘BALL::FPTBondOrderStrategy::DPConfig_’ has user-provided ‘BALL::FPTBondOrderStrategy::DPConfig_& BALL::FPTBondOrderStrategy::DPConfig_::operator=(const BALL::FPTBondOrderStrategy::DPConfig_&)’ 245 | FPTBondOrderStrategy::DPConfig_& FPTBondOrderStrategy::DPConfig_::operator = (DPConfig_ const& copy) | ^~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C.o -c /<>/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignment.h:13, from /<>/include/BALL/STRUCTURE/BONDORDERS/bondOrderAssignmentStrategy.h:5, from /<>/include/BALL/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.h:5, from /<>/source/STRUCTURE/BONDORDERS/KGreedyBondOrderStrategy.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C.o -c /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:13, from /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/BONDORDERS/partialBondOrderAssignment.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C: In member function ‘bool BALL::PartialBondOrderAssignment::estimatePenalty_(bool, HEURISTIC_INDEX)’: /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:226:53: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 226 | for (b_it = a_it->beginBond(); +b_it; b_it++) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C: In member function ‘bool BALL::PartialBondOrderAssignment::estimatePenalty_(bool, HEURISTIC_INDEX)’: /<>/source/STRUCTURE/BONDORDERS/partialBondOrderAssignment.C:226:53: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 226 | for (b_it = a_it->beginBond(); +b_it; b_it++) | ^ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/addHydrogenProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/addHydrogenProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/addHydrogenProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/addHydrogenProcessor.C.o -c /<>/source/STRUCTURE/addHydrogenProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/addHydrogenProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/addHydrogenProcessor.h:13, from /<>/source/STRUCTURE/addHydrogenProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/processor.h:9, from /<>/include/BALL/STRUCTURE/addHydrogenProcessor.h:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/source/STRUCTURE/addHydrogenProcessor.C:12: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/analyticalSES.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/analyticalSES.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/analyticalSES.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/analyticalSES.C.o -c /<>/source/STRUCTURE/analyticalSES.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/source/STRUCTURE/analyticalSES.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/analyticalSES.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/assignBondOrderProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/assignBondOrderProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/assignBondOrderProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/assignBondOrderProcessor.C.o -c /<>/source/STRUCTURE/assignBondOrderProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/kernel.h:16, from /<>/source/STRUCTURE/assignBondOrderProcessor.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/kernel.h:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/assignBondOrderProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::AssignBondOrderProcessor::operator()(BALL::AtomContainer&)’: /<>/source/STRUCTURE/assignBondOrderProcessor.C:594:93: warning: comparison of integer expressions of different signedness: ‘BALL::Size’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 594 | && ((getNumberOfComputedSolutions() < max_number_of_solutions_) || (!max_number_of_solutions_)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/assignBondOrderProcessor.C: In member function ‘bool BALL::AssignBondOrderProcessor::readAtomPenalties_()’: /<>/source/STRUCTURE/assignBondOrderProcessor.C:667:43: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 667 | for (unsigned int i= 0; i < entries.length(); i++) | ~~^~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/assignBondOrderProcessor.C:705:68: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 705 | for (unsigned int k = 0; k < penalties.length(); k++) | ~~^~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/kernel.h:28: /<>/source/STRUCTURE/assignBondOrderProcessor.C: In member function ‘bool BALL::AssignBondOrderProcessor::precomputeBondLengthPenalties_()’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/assignBondOrderProcessor.C:774:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 774 | BALL_FOREACH_BOND(*ac_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/assignBondOrderProcessor.C: In member function ‘bool BALL::AssignBondOrderProcessor::precomputeBondLengthPenalties_()’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/assignBondOrderProcessor.C:774:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 774 | BALL_FOREACH_BOND(*ac_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/assignBondOrderProcessor.C:774:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 774 | BALL_FOREACH_BOND(*ac_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/assignBondOrderProcessor.C: In member function ‘bool BALL::AssignBondOrderProcessor::precomputeBondLengthPenalties_()’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/assignBondOrderProcessor.C:774:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 774 | BALL_FOREACH_BOND(*ac_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/assignBondOrderProcessor.C:799:38: warning: variable ‘min_order’ set but not used [-Wunused-but-set-variable] 799 | Size min_order = 0; | ^~~~~~~~~ /<>/source/STRUCTURE/assignBondOrderProcessor.C: In member function ‘void BALL::AssignBondOrderProcessor::storeOriginalConfiguration_()’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/assignBondOrderProcessor.C:1187:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1187 | BALL_FOREACH_BOND(*ac_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/assignBondOrderProcessor.C:1187:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1187 | BALL_FOREACH_BOND(*ac_, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/assignBondOrderProcessor.C: In member function ‘float BALL::AssignBondOrderProcessor::evaluatePenalty(BALL::AtomContainer*)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/assignBondOrderProcessor.C:1449:33: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1449 | BALL_FOREACH_BOND(*ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/assignBondOrderProcessor.C:1449:33: note: in expansion of macro ‘BALL_FOREACH_BOND’ 1449 | BALL_FOREACH_BOND(*ac, a_it, b_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/atomBijection.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/atomBijection.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/atomBijection.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/atomBijection.C.o -c /<>/source/STRUCTURE/atomBijection.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/source/STRUCTURE/atomBijection.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/atomTyper.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/atomTyper.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/atomTyper.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/atomTyper.C.o -c /<>/source/STRUCTURE/atomTyper.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/atomTyper.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/atomTyper.C:7: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 75%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/binaryFingerprintMethods.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/binaryFingerprintMethods.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/binaryFingerprintMethods.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/binaryFingerprintMethods.C.o -c /<>/source/STRUCTURE/binaryFingerprintMethods.C /<>/source/STRUCTURE/binaryFingerprintMethods.C: In static member function ‘static bool BALL::BinaryFingerprintMethods::parseBinaryFingerprint(const BALL::String&, std::vector&, unsigned int, const char*)’: /<>/source/STRUCTURE/binaryFingerprintMethods.C:293:57: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 293 | catch (Exception::InvalidFormat e) | ^ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/bindingPocketProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/bindingPocketProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/bindingPocketProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/bindingPocketProcessor.C.o -c /<>/source/STRUCTURE/bindingPocketProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:9, from /<>/source/STRUCTURE/bindingPocketProcessor.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/bindingPocketProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::BindingPocketProcessor::operator()(BALL::Composite&)’: /<>/source/STRUCTURE/bindingPocketProcessor.C:239:43: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 239 | ai = s->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/bindingPocketProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::BindingPocketProcessor::operator()(BALL::Composite&)’: /<>/source/STRUCTURE/bindingPocketProcessor.C:239:43: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 239 | ai = s->beginAtom(); | ^ /<>/source/STRUCTURE/bindingPocketProcessor.C:245:43: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 245 | ai = s->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/bindingPocketProcessor.C:251:43: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 251 | ai = s->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:21: /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = BALL::BindingPocketProcessor::Sphere_; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::BindingPocketProcessor::Sphere_; BALL::Position = unsigned int]’ /<>/source/STRUCTURE/bindingPocketProcessor.C:398:24: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/processor.h:9, from /<>/include/BALL/STRUCTURE/bindingPocketProcessor.h:5: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::pair, double>}; _Tp = std::pair, double>; _Alloc = std::allocator, double> >]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector, double> >::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair, double>}; _Tp = std::pair, double>; _Alloc = std::allocator, double> >]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::pair, double>; _Alloc = std::allocator, double> >]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘virtual bool BALL::BindingPocketProcessor::finish()’ at /<>/source/STRUCTURE/bindingPocketProcessor.C:463:20: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, double>*, std::vector, double> > >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair, double>}; _Tp = std::pair, double>; _Alloc = std::allocator, double> >]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::pair, double>; _Alloc = std::allocator, double> >]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘virtual bool BALL::BindingPocketProcessor::finish()’ at /<>/source/STRUCTURE/bindingPocketProcessor.C:477:38: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator, double>*, std::vector, double> > >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/buildBondsProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/buildBondsProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/buildBondsProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/buildBondsProcessor.C.o -c /<>/source/STRUCTURE/buildBondsProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/buildBondsProcessor.h:13, from /<>/source/STRUCTURE/buildBondsProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/buildBondsProcessor.C:7: /<>/source/STRUCTURE/buildBondsProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::BuildBondsProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/buildBondsProcessor.C:90:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 90 | BALL_FOREACH_ATOM(ac, ait) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/buildBondsProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::BuildBondsProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/buildBondsProcessor.C:90:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 90 | BALL_FOREACH_ATOM(ac, ait) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/buildBondsProcessor.C: In member function ‘BALL::Size BALL::BuildBondsProcessor::buildBondsHashGrid3_(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:90:55: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 90 | for (first_atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/buildBondsProcessor.C:129:25: note: in expansion of macro ‘BALL_FOREACH_ATOM_PAIR’ 129 | BALL_FOREACH_ATOM_PAIR(ac, ait1, ait2) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:92:58: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 92 | for (second_atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/buildBondsProcessor.C:129:25: note: in expansion of macro ‘BALL_FOREACH_ATOM_PAIR’ 129 | BALL_FOREACH_ATOM_PAIR(ac, ait1, ait2) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/buildBondsProcessor.C: In member function ‘void BALL::BuildBondsProcessor::estimateBondOrders_(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/buildBondsProcessor.C:258:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 258 | BALL_FOREACH_BOND(ac, ait, bit) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/buildBondsProcessor.C:258:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 258 | BALL_FOREACH_BOND(ac, ait, bit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/buildBondsProcessor.C: In member function ‘void BALL::BuildBondsProcessor::estimateBondOrders_(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/buildBondsProcessor.C:258:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 258 | BALL_FOREACH_BOND(ac, ait, bit) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/buildBondsProcessor.C: In member function ‘void BALL::BuildBondsProcessor::deleteOverestimatedBonds_(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/buildBondsProcessor.C:333:17: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 333 | BALL_FOREACH_ATOM(ac, ait) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/buildBondsProcessor.C:8: /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = BALL::Atom*; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::Atom*; BALL::Position = unsigned int]’ /<>/source/STRUCTURE/buildBondsProcessor.C:165:19: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/connectedComponentsProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/connectedComponentsProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/connectedComponentsProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/connectedComponentsProcessor.C.o -c /<>/source/STRUCTURE/connectedComponentsProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/STRUCTURE/connectedComponentsProcessor.h:9, from /<>/source/STRUCTURE/connectedComponentsProcessor.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/connectedComponentsProcessor.C:5: /<>/source/STRUCTURE/connectedComponentsProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::ConnectedComponentsProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/connectedComponentsProcessor.C:50:17: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 50 | BALL_FOREACH_ATOM(ac, atom_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/connectedComponentsProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::ConnectedComponentsProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/connectedComponentsProcessor.C:50:17: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 50 | BALL_FOREACH_ATOM(ac, atom_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:141:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 141 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/connectedComponentsProcessor.C:66:17: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 66 | BALL_FOREACH_INTRABOND(ac, atom_it, bond_iter) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:143:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 143 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/connectedComponentsProcessor.C:66:17: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 66 | BALL_FOREACH_INTRABOND(ac, atom_it, bond_iter) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/connectedComponentsProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::ConnectedComponentsProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:143:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 143 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/connectedComponentsProcessor.C:66:17: note: in expansion of macro ‘BALL_FOREACH_INTRABOND’ 66 | BALL_FOREACH_INTRABOND(ac, atom_it, bond_iter) | ^~~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/connolly.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/connolly.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/connolly.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/connolly.C.o -c /<>/source/STRUCTURE/connolly.C [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/defaultProcessors.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/defaultProcessors.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/defaultProcessors.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/defaultProcessors.C.o -c /<>/source/STRUCTURE/defaultProcessors.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/STRUCTURE/defaultProcessors.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/defaultProcessors.h:13, from /<>/source/STRUCTURE/defaultProcessors.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/disulfidBondProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/disulfidBondProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/disulfidBondProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/disulfidBondProcessor.C.o -c /<>/source/STRUCTURE/disulfidBondProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/disulfidBondProcessor.h:9, from /<>/source/STRUCTURE/disulfidBondProcessor.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/disulfidBondProcessor.C:15: /<>/source/STRUCTURE/disulfidBondProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::DisulfidBondProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/disulfidBondProcessor.C:43:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 43 | BALL_FOREACH_BOND(ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/disulfidBondProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::DisulfidBondProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/disulfidBondProcessor.C:43:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 43 | BALL_FOREACH_BOND(ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/disulfidBondProcessor.C:43:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 43 | BALL_FOREACH_BOND(ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/disulfidBondProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::DisulfidBondProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/disulfidBondProcessor.C:43:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 43 | BALL_FOREACH_BOND(ac, atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/disulfidBondProcessor.C: In member function ‘bool BALL::DisulfidBondProcessor::connect(BALL::Atom*, BALL::Atom*, bool)’: /<>/source/STRUCTURE/disulfidBondProcessor.C:121:66: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 121 | b_it = atom2->beginBond(); | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/disulfidBondProcessor.C: In member function ‘bool BALL::DisulfidBondProcessor::connect(BALL::Residue*, BALL::Residue*, bool)’: /<>/source/STRUCTURE/disulfidBondProcessor.C:194:52: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 194 | a_it = residue2->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/disulfidBondProcessor.C: In member function ‘bool BALL::DisulfidBondProcessor::disconnect(BALL::Residue*, BALL::Residue*)’: /<>/source/STRUCTURE/disulfidBondProcessor.C:338:60: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 338 | a_it = residue2->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/DNAMutator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/DNAMutator.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/DNAMutator.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/DNAMutator.C.o -c /<>/source/STRUCTURE/DNAMutator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/source/STRUCTURE/DNAMutator.C:11: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/DNAMutator.h:12, from /<>/source/STRUCTURE/DNAMutator.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/fragmentDB.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/fragmentDB.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/fragmentDB.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/fragmentDB.C.o -c /<>/source/STRUCTURE/fragmentDB.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/fragmentDB.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/fragmentDB.C: In member function ‘void BALL::FragmentDB::parseBonds_(BALL::ResourceEntry&, BALL::Fragment&)’: /<>/source/STRUCTURE/fragmentDB.C:306:67: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 306 | for (atom_it = fragment.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/fragmentDB.C: In member function ‘void BALL::FragmentDB::parseBonds_(BALL::ResourceEntry&, BALL::Fragment&)’: /<>/source/STRUCTURE/fragmentDB.C:306:67: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 306 | for (atom_it = fragment.beginAtom(); +atom_it; ++atom_it) | ^ /<>/source/STRUCTURE/fragmentDB.C: In member function ‘void BALL::FragmentDB::parseDelete_(BALL::ResourceEntry&, BALL::Fragment&)’: /<>/source/STRUCTURE/fragmentDB.C:385:67: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 385 | for (atom_it = fragment.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/fragmentDB.C: In member function ‘void BALL::FragmentDB::parseRename_(BALL::ResourceEntry&, BALL::Fragment&)’: /<>/source/STRUCTURE/fragmentDB.C:423:67: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 423 | for (atom_it = fragment.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/fragmentDB.C: In member function ‘void BALL::FragmentDB::NormalizeNamesProcessor::countHits_(BALL::HashMap*, int>&, const BALL::Fragment*, CountingMode)’: /<>/source/STRUCTURE/fragmentDB.C:1239:56: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 1239 | for (atom_it = frag->beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/fragmentDB.C: In member function ‘BALL::Size BALL::FragmentDB::BuildBondsProcessor::buildFragmentBonds(BALL::Fragment&, const BALL::Fragment&) const’: /<>/source/STRUCTURE/fragmentDB.C:1483:70: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 1483 | for (tplate_bond_it = tplate_atom->beginBond(); +tplate_bond_it; ++tplate_bond_it) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/fragmentDB.C: In member function ‘BALL::Size BALL::FragmentDB::BuildBondsProcessor::buildFragmentBonds(BALL::Fragment&, const BALL::Fragment&) const’: /<>/source/STRUCTURE/fragmentDB.C:1483:70: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 1483 | for (tplate_bond_it = tplate_atom->beginBond(); +tplate_bond_it; ++tplate_bond_it) | ^ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/geometricProperties.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/geometricProperties.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/geometricProperties.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/geometricProperties.C.o -c /<>/source/STRUCTURE/geometricProperties.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/STRUCTURE/geometricProperties.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/geometricProperties.h:13: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/geometricProperties.C: In member function ‘virtual bool BALL::FragmentDistanceCollector::finish()’: /<>/source/STRUCTURE/geometricProperties.C:199:74: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 199 | for (composite_it = reference_composite_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/geometricProperties.C:223:71: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 223 | for (atom_iterator2 = mol_fragment->beginAtom(); +atom_iterator2; ++ atom_iterator2) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/geometricProperties.C:238:87: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 238 | for (atom_iterator2 = mol_fragment->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/geometricTransformations.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/geometricTransformations.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/geometricTransformations.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/geometricTransformations.C.o -c /<>/source/STRUCTURE/geometricTransformations.C [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/graphEdge.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/graphEdge.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/graphEdge.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/graphEdge.C.o -c /<>/source/STRUCTURE/graphEdge.C [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/graphFace.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/graphFace.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/graphFace.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/graphFace.C.o -c /<>/source/STRUCTURE/graphFace.C [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/graphVertex.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/graphVertex.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/graphVertex.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/graphVertex.C.o -c /<>/source/STRUCTURE/graphVertex.C [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/HBondProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/HBondProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/HBondProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/HBondProcessor.C.o -c /<>/source/STRUCTURE/HBondProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/HBondProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/HBondProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::HBondProcessor::operator()(BALL::Composite&)’: /<>/source/STRUCTURE/HBondProcessor.C:101:46: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 101 | ri = s->beginResidue(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/HBondProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::HBondProcessor::operator()(BALL::Composite&)’: /<>/source/STRUCTURE/HBondProcessor.C:101:46: note: synthesized method ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ first required here 101 | ri = s->beginResidue(); | ^ /<>/source/STRUCTURE/HBondProcessor.C:107:46: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 107 | ri = s->beginResidue(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/HBondProcessor.C:113:46: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>& BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 113 | ri = s->beginResidue(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::ResidueIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Residue; Position = BALL::BidirectionalIterator; Traits = BALL::ResidueIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/HBondProcessor.C:8: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/HBondProcessor.C:129:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 129 | BALL_FOREACH_BOND(*ri_del, ai, bi) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/HBondProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::HBondProcessor::operator()(BALL::Composite&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/HBondProcessor.C:129:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 129 | BALL_FOREACH_BOND(*ri_del, ai, bi) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/HBondProcessor.C:129:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 129 | BALL_FOREACH_BOND(*ri_del, ai, bi) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/HBondProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::HBondProcessor::operator()(BALL::Composite&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/HBondProcessor.C:129:25: note: in expansion of macro ‘BALL_FOREACH_BOND’ 129 | BALL_FOREACH_BOND(*ri_del, ai, bi) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/HBondProcessor.C: In member function ‘bool BALL::HBondProcessor::finishWishartEtAl_()’: /<>/source/STRUCTURE/HBondProcessor.C:525:76: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 525 | for (bi = acceptors_[a]->beginBond(); +bi; ++bi) | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/HBondProcessor.C:533:73: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 533 | for (bi = donors_[d]->beginBond(); +bi; ++bi) | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/HBondProcessor.C:6: /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = BALL::HBondProcessor::ResidueData*; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::HBondProcessor::ResidueData*; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:563:21: required from ‘void BALL::HashGridBox3::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::HBondProcessor::ResidueData*; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:206:13: required from ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3&) [with Item = BALL::HBondProcessor::ResidueData*]’ /<>/include/BALL/CONCEPT/baseIterator.h:190:6: required from ‘BALL::BaseIterator::BaseIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:128:67: required from ‘BALL::ConstForwardIterator::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:298:20: required from ‘BALL::ForwardIterator::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:309:19: required from ‘static BALL::ForwardIterator BALL::ForwardIterator::begin(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/DATATYPE/hashGrid.h:332:29: required from ‘BALL::HashGridBox3::BoxIterator BALL::HashGridBox3::beginBox() [with Item = BALL::HBondProcessor::ResidueData*; BoxIterator = BALL::ForwardIterator, BALL::HashGridBox3, unsigned int, BALL::HashGridBox3::BoxIteratorTraits>]’ /<>/source/STRUCTURE/HBondProcessor.C:350:67: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/hybridisationProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/hybridisationProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/hybridisationProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/hybridisationProcessor.C.o -c /<>/source/STRUCTURE/hybridisationProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/hybridisationProcessor.h:13, from /<>/source/STRUCTURE/hybridisationProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/hybridisationProcessor.C: In member function ‘double BALL::HybridisationProcessor::AverageBondAngle_(BALL::Atom*)’: /<>/source/STRUCTURE/hybridisationProcessor.C:112:43: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 112 | for (b_it1 = a->beginBond(); +b_it1; ++b_it1) | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/hybridisationProcessor.C: In member function ‘double BALL::HybridisationProcessor::AverageBondAngle_(BALL::Atom*)’: /<>/source/STRUCTURE/hybridisationProcessor.C:112:43: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 112 | for (b_it1 = a->beginBond(); +b_it1; ++b_it1) | ^ /<>/source/STRUCTURE/hybridisationProcessor.C:114:33: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 114 | b_it2 = b_it1; | ^~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/hybridisationProcessor.C:7: /<>/source/STRUCTURE/hybridisationProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::HybridisationProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/hybridisationProcessor.C:147:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 147 | BALL_FOREACH_ATOM(ac, ait) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/hybridisationProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::HybridisationProcessor::operator()(BALL::AtomContainer&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/hybridisationProcessor.C:147:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 147 | BALL_FOREACH_ATOM(ac, ait) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/hybridisationProcessor.C:217:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 217 | for (ait = ac.beginAtom(); +ait; ++ait) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/hybridisationProcessor.C:365:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 365 | for (ait = ac.beginAtom(); +ait; ++ait) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/hybridisationProcessor.C:371:68: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 371 | for (b_it = ait->beginBond(); +b_it; ++b_it) | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/hybridisationProcessor.C:410:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 410 | BALL_FOREACH_ATOM(ac, ait) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/hybridisationProcessor.C:418:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 418 | BALL_FOREACH_ATOM(ac, ait) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/kekulizer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/kekulizer.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/kekulizer.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/kekulizer.C.o -c /<>/source/STRUCTURE/kekulizer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/kekulizer.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/kekulizer.C:7: /<>/source/STRUCTURE/kekulizer.C: In member function ‘bool BALL::Kekuliser::setup(BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/kekulizer.C:197:9: note: in expansion of macro ‘BALL_FOREACH_BOND’ 197 | BALL_FOREACH_BOND(mol, ait, bit) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/kekulizer.C: In member function ‘bool BALL::Kekuliser::setup(BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/kekulizer.C:197:9: note: in expansion of macro ‘BALL_FOREACH_BOND’ 197 | BALL_FOREACH_BOND(mol, ait, bit) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/kekulizer.C:197:9: note: in expansion of macro ‘BALL_FOREACH_BOND’ 197 | BALL_FOREACH_BOND(mol, ait, bit) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/kekulizer.C: In member function ‘bool BALL::Kekuliser::setup(BALL::Molecule&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/kekulizer.C:197:9: note: in expansion of macro ‘BALL_FOREACH_BOND’ 197 | BALL_FOREACH_BOND(mol, ait, bit) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/kekulizer.C: In member function ‘bool BALL::Kekuliser::fixAromaticRings_()’: /<>/source/STRUCTURE/kekulizer.C:374:46: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 374 | bit = atom.beginBond(); | ^ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/kekulizer.C: In member function ‘void BALL::Kekuliser::collectAromaticAtoms_()’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/kekulizer.C:587:9: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 587 | BALL_FOREACH_ATOM(*molecule_, ait) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/kekulizer.C:5: In copy constructor ‘BALL::Kekuliser::AtomInfo::AtomInfo(const BALL::Kekuliser::AtomInfo&)’, inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = BALL::Kekuliser::AtomInfo; _Args = {const BALL::Kekuliser::AtomInfo&}; _Tp = BALL::Kekuliser::AtomInfo]’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = BALL::Kekuliser::AtomInfo; _Args = {const BALL::Kekuliser::AtomInfo&}; _Tp = BALL::Kekuliser::AtomInfo]’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::Kekuliser::AtomInfo; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘bool BALL::Kekuliser::fixAromaticRings_()’ at /<>/source/STRUCTURE/kekulizer.C:350:25: /<>/include/BALL/STRUCTURE/kekulizer.h:40:36: warning: ‘temp_ai.BALL::Kekuliser::AtomInfo::atom’ may be used uninitialized [-Wmaybe-uninitialized] 40 | struct BALL_EXPORT AtomInfo | ^~~~~~~~ /<>/source/STRUCTURE/kekulizer.C: In member function ‘bool BALL::Kekuliser::fixAromaticRings_()’: /<>/source/STRUCTURE/kekulizer.C:283:18: note: ‘temp_ai’ declared here 283 | AtomInfo temp_ai; | ^~~~~~~ In copy constructor ‘BALL::Kekuliser::AtomInfo::AtomInfo(const BALL::Kekuliser::AtomInfo&)’, inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = BALL::Kekuliser::AtomInfo; _Args = {const BALL::Kekuliser::AtomInfo&}; _Tp = BALL::Kekuliser::AtomInfo]’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = BALL::Kekuliser::AtomInfo; _Args = {const BALL::Kekuliser::AtomInfo&}; _Tp = BALL::Kekuliser::AtomInfo]’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::Kekuliser::AtomInfo; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘bool BALL::Kekuliser::fixAromaticRings_()’ at /<>/source/STRUCTURE/kekulizer.C:350:25: /<>/include/BALL/STRUCTURE/kekulizer.h:40:36: warning: ‘temp_ai.BALL::Kekuliser::AtomInfo::min_double’ may be used uninitialized [-Wmaybe-uninitialized] 40 | struct BALL_EXPORT AtomInfo | ^~~~~~~~ /<>/source/STRUCTURE/kekulizer.C: In member function ‘bool BALL::Kekuliser::fixAromaticRings_()’: /<>/source/STRUCTURE/kekulizer.C:283:18: note: ‘temp_ai’ declared here 283 | AtomInfo temp_ai; | ^~~~~~~ In copy constructor ‘BALL::Kekuliser::AtomInfo::AtomInfo(const BALL::Kekuliser::AtomInfo&)’, inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = BALL::Kekuliser::AtomInfo; _Args = {const BALL::Kekuliser::AtomInfo&}; _Tp = BALL::Kekuliser::AtomInfo]’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = BALL::Kekuliser::AtomInfo; _Args = {const BALL::Kekuliser::AtomInfo&}; _Tp = BALL::Kekuliser::AtomInfo]’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::Kekuliser::AtomInfo; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘bool BALL::Kekuliser::fixAromaticRings_()’ at /<>/source/STRUCTURE/kekulizer.C:350:25: /<>/include/BALL/STRUCTURE/kekulizer.h:40:36: warning: ‘temp_ai.BALL::Kekuliser::AtomInfo::max_double’ may be used uninitialized [-Wmaybe-uninitialized] 40 | struct BALL_EXPORT AtomInfo | ^~~~~~~~ /<>/source/STRUCTURE/kekulizer.C: In member function ‘bool BALL::Kekuliser::fixAromaticRings_()’: /<>/source/STRUCTURE/kekulizer.C:283:18: note: ‘temp_ai’ declared here 283 | AtomInfo temp_ai; | ^~~~~~~ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/molecularSimilarity.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/molecularSimilarity.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/molecularSimilarity.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/molecularSimilarity.C.o -c /<>/source/STRUCTURE/molecularSimilarity.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/STRUCTURE/molecularSimilarity.h:22, from /<>/source/STRUCTURE/molecularSimilarity.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/molecularSimilarity.C: In member function ‘void BALL::MolecularSimilarity::generateFingerprint(BALL::Molecule&, std::vector&)’: /<>/source/STRUCTURE/molecularSimilarity.C:405:40: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 405 | catch(BALL::Exception::GeneralException) | ^~~~~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/mutator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/mutator.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/mutator.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/mutator.C.o -c /<>/source/STRUCTURE/mutator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/source/STRUCTURE/mutator.C:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/nucleotideMapping.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/nucleotideMapping.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/nucleotideMapping.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/nucleotideMapping.C.o -c /<>/source/STRUCTURE/nucleotideMapping.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/source/STRUCTURE/nucleotideMapping.C:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/numericalSAS.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/numericalSAS.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/numericalSAS.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/numericalSAS.C.o -c /<>/source/STRUCTURE/numericalSAS.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/geometricProperties.h:25, from /<>/source/STRUCTURE/numericalSAS.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/numericalSAS.h:13, from /<>/source/STRUCTURE/numericalSAS.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/numericalSAS.C:10: /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = const BALL::Atom*; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = const BALL::Atom*; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:563:21: required from ‘void BALL::HashGridBox3::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = const BALL::Atom*; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:206:13: required from ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3&) [with Item = const BALL::Atom*]’ /<>/include/BALL/CONCEPT/baseIterator.h:190:6: required from ‘BALL::BaseIterator::BaseIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:128:67: required from ‘BALL::ConstForwardIterator::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:298:20: required from ‘BALL::ForwardIterator::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:309:19: required from ‘static BALL::ForwardIterator BALL::ForwardIterator::begin(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/DATATYPE/hashGrid.h:332:29: required from ‘BALL::HashGridBox3::BoxIterator BALL::HashGridBox3::beginBox() [with Item = const BALL::Atom*; BoxIterator = BALL::ForwardIterator, BALL::HashGridBox3, unsigned int, BALL::HashGridBox3::BoxIteratorTraits>]’ /<>/source/STRUCTURE/numericalSAS.C:150:72: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/peptides.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/peptides.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/peptides.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/peptides.C.o -c /<>/source/STRUCTURE/peptides.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/source/STRUCTURE/peptides.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/peptideBuilder.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/peptideBuilder.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/peptideBuilder.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/peptideBuilder.C.o -c /<>/source/STRUCTURE/peptideBuilder.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/peptides.h:13, from /<>/include/BALL/STRUCTURE/peptideBuilder.h:9, from /<>/source/STRUCTURE/peptideBuilder.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/peptideBuilder.C: In member function ‘BALL::PDBAtom* BALL::Peptides::PeptideBuilder::getAtomByName_(BALL::Residue&, const BALL::String&)’: /<>/source/STRUCTURE/peptideBuilder.C:616:52: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 616 | for (ai = res.beginPDBAtom(); +ai; ++ai) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator; Traits = BALL::PDBAtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator; Traits = BALL::PDBAtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/peptideBuilder.C: In member function ‘BALL::PDBAtom* BALL::Peptides::PeptideBuilder::getAtomByName_(BALL::Residue&, const BALL::String&)’: /<>/source/STRUCTURE/peptideBuilder.C:616:52: note: synthesized method ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ first required here 616 | for (ai = res.beginPDBAtom(); +ai; ++ai) | ^ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/peptideCapProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/peptideCapProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/peptideCapProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/peptideCapProcessor.C.o -c /<>/source/STRUCTURE/peptideCapProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/peptideCapProcessor.h:21, from /<>/source/STRUCTURE/peptideCapProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/STRUCTURE/peptideCapProcessor.h:13: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/peptideCapProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::PeptideCapProcessor::operator()(BALL::Chain&)’: /<>/source/STRUCTURE/peptideCapProcessor.C:211:65: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 211 | n_atom = chain.getResidue(0)->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/peptideCapProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::PeptideCapProcessor::operator()(BALL::Chain&)’: /<>/source/STRUCTURE/peptideCapProcessor.C:211:65: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 211 | n_atom = chain.getResidue(0)->beginAtom(); | ^ /<>/source/STRUCTURE/peptideCapProcessor.C:239:65: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 239 | n_atom = chain.getResidue(1)->beginAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/radialDistributionFunction.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/radialDistributionFunction.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/radialDistributionFunction.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/radialDistributionFunction.C.o -c /<>/source/STRUCTURE/radialDistributionFunction.C [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/reconstructFragmentProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/reconstructFragmentProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/reconstructFragmentProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/reconstructFragmentProcessor.C.o -c /<>/source/STRUCTURE/reconstructFragmentProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:23, from /<>/source/STRUCTURE/reconstructFragmentProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/matrix44.h:23, from /<>/include/BALL/STRUCTURE/reconstructFragmentProcessor.h:19: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/reconstructFragmentProcessor.C: In static member function ‘static BALL::Triple BALL::ReconstructFragmentProcessor::getTwoReferenceAtoms(const BALL::Atom&, const BALL::HashSet&)’: /<>/source/STRUCTURE/reconstructFragmentProcessor.C:77:76: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | bond = (*current)->endBond(); | ^ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/reconstructFragmentProcessor.C: In static member function ‘static BALL::Triple BALL::ReconstructFragmentProcessor::getTwoReferenceAtoms(const BALL::Atom&, const BALL::HashSet&)’: /<>/source/STRUCTURE/reconstructFragmentProcessor.C:77:76: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 77 | bond = (*current)->endBond(); | ^ [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RDFIntegrator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/RDFIntegrator.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/RDFIntegrator.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/RDFIntegrator.C.o -c /<>/source/STRUCTURE/RDFIntegrator.C [ 81%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RDFParameter.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/RDFParameter.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/RDFParameter.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/RDFParameter.C.o -c /<>/source/STRUCTURE/RDFParameter.C In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/composite.h:9, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/RDFParameter.h:9, from /<>/source/STRUCTURE/RDFParameter.C:5: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const BALL::RadialDistributionFunction&}; _Tp = BALL::RadialDistributionFunction; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::RadialDistributionFunction; _Alloc = std::allocator]’, inlined from ‘virtual bool BALL::RDFParameter::extractSection(BALL::ForceFieldParameters&, const BALL::String&)’ at /<>/source/STRUCTURE/RDFParameter.C:186:26: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RDFSection.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/RDFSection.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/RDFSection.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/RDFSection.C.o -c /<>/source/STRUCTURE/RDFSection.C [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/reducedSurface.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/reducedSurface.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/reducedSurface.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/reducedSurface.C.o -c /<>/source/STRUCTURE/reducedSurface.C In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/DATATYPE/hashSet.h:17, from /<>/include/BALL/CONCEPT/persistenceManager.h:21, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/STRUCTURE/reducedSurface.h:13, from /<>/source/STRUCTURE/reducedSurface.C:5: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/source/STRUCTURE/reducedSurface.C:1883:27: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared ‘BALL::HashGridBox3::BoxIteratorTraits& BALL::HashGridBox3::BoxIteratorTraits::operator=(const BALL::HashGridBox3::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/reducedSurface.C:8: /<>/include/BALL/DATATYPE/hashGrid.h:209:25: note: because ‘BALL::HashGridBox3::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = unsigned int]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = unsigned int; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = unsigned int; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:563:21: required from ‘void BALL::HashGridBox3::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = unsigned int; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:206:13: required from ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3&) [with Item = unsigned int]’ /<>/include/BALL/CONCEPT/baseIterator.h:190:6: required from ‘BALL::BaseIterator::BaseIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:128:67: required from ‘BALL::ConstForwardIterator::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:298:20: required from ‘BALL::ForwardIterator::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:309:19: required from ‘static BALL::ForwardIterator BALL::ForwardIterator::begin(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/DATATYPE/hashGrid.h:332:29: required from ‘BALL::HashGridBox3::BoxIterator BALL::HashGridBox3::beginBox() [with Item = unsigned int; BoxIterator = BALL::ForwardIterator, BALL::HashGridBox3, unsigned int, BALL::HashGridBox3::BoxIteratorTraits>]’ /<>/source/STRUCTURE/reducedSurface.C:1883:26: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/residueChecker.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/residueChecker.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/residueChecker.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/residueChecker.C.o -c /<>/source/STRUCTURE/residueChecker.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/residueChecker.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/STRUCTURE/residueChecker.h:21, from /<>/source/STRUCTURE/residueChecker.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueChecker.C: In member function ‘bool BALL::ResidueChecker::checkCompleteness(const BALL::Residue&, const BALL::Residue&, const BALL::String&)’: /<>/source/STRUCTURE/residueChecker.C:218:52: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 218 | for (atom_it = reference.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueChecker.C:224:50: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 224 | for (atom_it = residue.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueChecker.C: In member function ‘bool BALL::ResidueChecker::checkAtomPositions(const BALL::Residue&, const BALL::String&)’: /<>/source/STRUCTURE/residueChecker.C:278:46: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 278 | for (atom_it = res.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueChecker.C:298:41: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 298 | for (atom_it2 = atom_it, ++atom_it2; +atom_it2; ++atom_it2) | ^~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/residueChecker.C:7: /<>/source/STRUCTURE/residueChecker.C: In member function ‘bool BALL::ResidueChecker::checkTemplate(const BALL::Residue&, const BALL::Residue&, const BALL::String&)’: /<>/include/BALL/KERNEL/forEach.h:108:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 108 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/residueChecker.C:393:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 393 | BALL_FOREACH_BOND(reference, bond_atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:110:51: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/residueChecker.C:393:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 393 | BALL_FOREACH_BOND(reference, bond_atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueChecker.C: In member function ‘bool BALL::ResidueChecker::checkTemplate(const BALL::Residue&, const BALL::Residue&, const BALL::String&)’: /<>/include/BALL/KERNEL/forEach.h:110:51: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 110 | for (bond_iterator = (*atom_iterator).beginBond(); \ | ^ /<>/source/STRUCTURE/residueChecker.C:393:17: note: in expansion of macro ‘BALL_FOREACH_BOND’ 393 | BALL_FOREACH_BOND(reference, bond_atom_it, bond_it) | ^~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueChecker.C:397:58: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 397 | for (atom_it = residue.beginAtom(); +atom_it && (first == 0 || second == 0); ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/rGroupAssembler.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/rGroupAssembler.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/rGroupAssembler.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/rGroupAssembler.C.o -c /<>/source/STRUCTURE/rGroupAssembler.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/rGroupAssembler.C:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/KERNEL/bond.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/ringAnalyser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/ringAnalyser.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/ringAnalyser.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/ringAnalyser.C.o -c /<>/source/STRUCTURE/ringAnalyser.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/source/STRUCTURE/ringAnalyser.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RSEdge.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/RSEdge.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/RSEdge.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/RSEdge.C.o -c /<>/source/STRUCTURE/RSEdge.C [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RSFace.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/RSFace.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/RSFace.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/RSFace.C.o -c /<>/source/STRUCTURE/RSFace.C [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RSVertex.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/RSVertex.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/RSVertex.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/RSVertex.C.o -c /<>/source/STRUCTURE/RSVertex.C [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SASEdge.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/SASEdge.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/SASEdge.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/SASEdge.C.o -c /<>/source/STRUCTURE/SASEdge.C [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SASFace.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/SASFace.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/SASFace.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/SASFace.C.o -c /<>/source/STRUCTURE/SASFace.C [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SASVertex.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/SASVertex.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/SASVertex.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/SASVertex.C.o -c /<>/source/STRUCTURE/SASVertex.C [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/sdGenerator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/sdGenerator.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/sdGenerator.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/sdGenerator.C.o -c /<>/source/STRUCTURE/sdGenerator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/ringAnalyser.h:13, from /<>/include/BALL/STRUCTURE/sdGenerator.h:13, from /<>/source/STRUCTURE/sdGenerator.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/STRUCTURE/sdGenerator.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/sdGenerator.C:15: /<>/source/STRUCTURE/sdGenerator.C: In member function ‘void BALL::SDGenerator::prepare_()’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:56:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 56 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/sdGenerator.C: In member function ‘void BALL::SDGenerator::prepare_()’: /<>/include/BALL/KERNEL/forEach.h:64:49: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:56:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 56 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:89:17: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 89 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:117:41: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 117 | BALL_FOREACH_ATOM_BOND(*at_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/KERNEL/atom.h:17, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: warning: implicitly-declared ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:47:29: note: because ‘BALL::ConstRandomAccessIterator’ has user-provided ‘BALL::ConstRandomAccessIterator::ConstRandomAccessIterator(const BALL::ConstRandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 47 | BALL_INLINE ConstRandomAccessIterator(const ConstRandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:24:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 24 | class ConstRandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h: In member function ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’: /<>/include/BALL/CONCEPT/randomAccessIterator.h:413:15: note: synthesized method ‘BALL::ConstRandomAccessIterator& BALL::ConstRandomAccessIterator::operator=(const BALL::ConstRandomAccessIterator&)’ first required here 413 | class RandomAccessIterator | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/sdGenerator.C: In member function ‘void BALL::SDGenerator::prepare_()’: /<>/include/BALL/KERNEL/forEach.h:77:49: note: synthesized method ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ first required here 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:117:41: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 117 | BALL_FOREACH_ATOM_BOND(*at_it, bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:143:49: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 143 | BALL_FOREACH_ATOM_BOND(*partner, next_bond_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/sdGenerator.C: In member function ‘void BALL::SDGenerator::clear()’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:199:17: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 199 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/sdGenerator.C: In member function ‘void BALL::SDGenerator::generateSD(BALL::System&)’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:252:17: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 252 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/sdGenerator.C: In member function ‘void BALL::SDGenerator::computeShelleyPriorities_()’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:311:17: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 311 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:318:25: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 318 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:324:33: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 324 | BALL_FOREACH_ATOM_BOND(*at_it, b_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:337:17: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 337 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/sdGenerator.C: In member function ‘void BALL::SDGenerator::treatChains_()’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:992:17: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 992 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:1103:25: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 1103 | BALL_FOREACH_ATOM_BOND(*first_atom, b_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:1116:25: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 1116 | BALL_FOREACH_ATOM_BOND(*first_atom, b_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/sdGenerator.C: In member function ‘BALL::Angle BALL::SDGenerator::computeAngularSeparation_(BALL::Atom*)’: /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:1139:17: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 1139 | BALL_FOREACH_ATOM_BOND(*seed, b_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/sdGenerator.C: In member function ‘std::vector BALL::SDGenerator::sequenceSubstituents_(BALL::Atom*)’: /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:1235:17: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 1235 | BALL_FOREACH_ATOM_BOND(*seed, b_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:1353:41: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 1353 | BALL_FOREACH_ATOM_BOND(*seed, b_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/sdGenerator.C: In member function ‘void BALL::SDGenerator::assembleSD_()’: /<>/include/BALL/KERNEL/forEach.h:64:49: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 64 | for (atom_iterator = (atom_container).beginAtom(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:1608:17: note: in expansion of macro ‘BALL_FOREACH_ATOM’ 1608 | BALL_FOREACH_ATOM(*system_, at_it) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/forEach.h:77:49: warning: implicitly-declared ‘BALL::RandomAccessIterator& BALL::RandomAccessIterator::operator=(const BALL::RandomAccessIterator&)’ is deprecated [-Wdeprecated-copy] 77 | for (bond_iterator = (bond_container).beginBond(); \ | ^ /<>/source/STRUCTURE/sdGenerator.C:1730:33: note: in expansion of macro ‘BALL_FOREACH_ATOM_BOND’ 1730 | BALL_FOREACH_ATOM_BOND(*seed_atom, b_it) | ^~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/randomAccessIterator.h:437:29: note: because ‘BALL::RandomAccessIterator’ has user-provided ‘BALL::RandomAccessIterator::RandomAccessIterator(const BALL::RandomAccessIterator&) [with Container = BALL::Atom; DataType = BALL::Bond; Position = int; Traits = BALL::Atom::BondIteratorTraits]’ 437 | BALL_INLINE RandomAccessIterator(const RandomAccessIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SESEdge.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/SESEdge.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/SESEdge.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/SESEdge.C.o -c /<>/source/STRUCTURE/SESEdge.C [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SESFace.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/SESFace.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/SESFace.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/SESFace.C.o -c /<>/source/STRUCTURE/SESFace.C [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/SESVertex.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/SESVertex.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/SESVertex.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/SESVertex.C.o -c /<>/source/STRUCTURE/SESVertex.C [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/secondaryStructureProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/secondaryStructureProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/secondaryStructureProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/secondaryStructureProcessor.C.o -c /<>/source/STRUCTURE/secondaryStructureProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/HBondProcessor.h:13, from /<>/source/STRUCTURE/secondaryStructureProcessor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/STRUCTURE/secondaryStructureProcessor.h:13, from /<>/source/STRUCTURE/secondaryStructureProcessor.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/sideChainPlacementProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/sideChainPlacementProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/sideChainPlacementProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/sideChainPlacementProcessor.C.o -c /<>/source/STRUCTURE/sideChainPlacementProcessor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/kernel.h:16, from /<>/source/STRUCTURE/sideChainPlacementProcessor.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/kernel.h:12: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/sideChainPlacementProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::SideChainPlacementProcessor::operator()(BALL::AtomContainer&)’: /<>/source/STRUCTURE/sideChainPlacementProcessor.C:362:108: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 362 | for ( at_it_scwrled=res_it_scwrled->beginPDBAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator; Traits = BALL::PDBAtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::PDBAtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator; Traits = BALL::PDBAtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/sideChainPlacementProcessor.C: In member function ‘virtual BALL::Processor::Result BALL::SideChainPlacementProcessor::operator()(BALL::AtomContainer&)’: /<>/source/STRUCTURE/sideChainPlacementProcessor.C:362:108: note: synthesized method ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ first required here 362 | for ( at_it_scwrled=res_it_scwrled->beginPDBAtom(); | ^ /<>/source/STRUCTURE/sideChainPlacementProcessor.C:393:102: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>& BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 393 | for ( at_it_ori = to_mutate[j].first->beginPDBAtom(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::PDBAtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::PDBAtom; Position = BALL::BidirectionalIterator; Traits = BALL::PDBAtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smilesParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/smilesParser.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/smilesParser.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/smilesParser.C.o -c /<>/source/STRUCTURE/smilesParser.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from /<>/source/STRUCTURE/smilesParser.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/smartsParser.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/smartsParser.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/smartsParser.C.o -c /<>/source/STRUCTURE/smartsParser.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/STRUCTURE/smartsParser.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/smartsParser.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsMatcher.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/smartsMatcher.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/smartsMatcher.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/smartsMatcher.C.o -c /<>/source/STRUCTURE/smartsMatcher.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/QSAR/ringPerceptionProcessor.h:11, from /<>/source/STRUCTURE/smartsMatcher.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/solventAccessibleSurface.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/solventAccessibleSurface.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/solventAccessibleSurface.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/solventAccessibleSurface.C.o -c /<>/source/STRUCTURE/solventAccessibleSurface.C [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/solventExcludedSurface.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/solventExcludedSurface.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/solventExcludedSurface.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/solventExcludedSurface.C.o -c /<>/source/STRUCTURE/solventExcludedSurface.C In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/DATATYPE/hashSet.h:17, from /<>/include/BALL/CONCEPT/persistenceManager.h:21, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/circle3.h:15, from /<>/include/BALL/STRUCTURE/RSEdge.h:17, from /<>/include/BALL/STRUCTURE/SESEdge.h:13, from /<>/include/BALL/STRUCTURE/solventExcludedSurface.h:9, from /<>/source/STRUCTURE/solventExcludedSurface.C:5: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/source/STRUCTURE/solventExcludedSurface.C:1587:27: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared ‘BALL::HashGridBox3::BoxIteratorTraits& BALL::HashGridBox3::BoxIteratorTraits::operator=(const BALL::HashGridBox3::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/STRUCTURE/solventExcludedSurface.h:45: /<>/include/BALL/DATATYPE/hashGrid.h:209:25: note: because ‘BALL::HashGridBox3::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = int]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/source/STRUCTURE/solventExcludedSurface.C:2156:27: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared ‘BALL::HashGridBox3::BoxIteratorTraits& BALL::HashGridBox3::BoxIteratorTraits::operator=(const BALL::HashGridBox3::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ /<>/include/BALL/DATATYPE/hashGrid.h:209:25: note: because ‘BALL::HashGridBox3::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = unsigned int]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = int; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = int; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:563:21: required from ‘void BALL::HashGridBox3::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = int; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:206:13: required from ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3&) [with Item = int]’ /<>/include/BALL/CONCEPT/baseIterator.h:190:6: required from ‘BALL::BaseIterator::BaseIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:128:67: required from ‘BALL::ConstForwardIterator::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:298:20: required from ‘BALL::ForwardIterator::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:309:19: required from ‘static BALL::ForwardIterator BALL::ForwardIterator::begin(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/DATATYPE/hashGrid.h:332:29: required from ‘BALL::HashGridBox3::BoxIterator BALL::HashGridBox3::beginBox() [with Item = int; BoxIterator = BALL::ForwardIterator, BALL::HashGridBox3, unsigned int, BALL::HashGridBox3::BoxIteratorTraits>]’ /<>/source/STRUCTURE/solventExcludedSurface.C:1587:26: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = unsigned int; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = unsigned int; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:563:21: required from ‘void BALL::HashGridBox3::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = unsigned int; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:206:13: required from ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3&) [with Item = unsigned int]’ /<>/include/BALL/CONCEPT/baseIterator.h:190:6: required from ‘BALL::BaseIterator::BaseIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:128:67: required from ‘BALL::ConstForwardIterator::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:298:20: required from ‘BALL::ForwardIterator::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:309:19: required from ‘static BALL::ForwardIterator BALL::ForwardIterator::begin(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/DATATYPE/hashGrid.h:332:29: required from ‘BALL::HashGridBox3::BoxIterator BALL::HashGridBox3::beginBox() [with Item = unsigned int; BoxIterator = BALL::ForwardIterator, BALL::HashGridBox3, unsigned int, BALL::HashGridBox3::BoxIteratorTraits>]’ /<>/source/STRUCTURE/solventExcludedSurface.C:2156:26: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/structureMapper.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/structureMapper.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/structureMapper.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/structureMapper.C.o -c /<>/source/STRUCTURE/structureMapper.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/structureMapper.h:25, from /<>/source/STRUCTURE/structureMapper.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/geometricTransformations.h:13, from /<>/include/BALL/STRUCTURE/structureMapper.h:17: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/structureMapper.C: In member function ‘BALL::Size BALL::StructureMapper::countFragments_(const BALL::AtomContainer&) const’: /<>/source/STRUCTURE/structureMapper.C:54:49: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 54 | for (it = ac.beginAtomContainer(); +it; ++it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator; Traits = BALL::AtomContainerIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/structureMapper.C: In static member function ‘static BALL::Matrix4x4 BALL::StructureMapper::matchBackboneAtoms(const BALL::Residue&, const BALL::Residue&)’: /<>/source/STRUCTURE/structureMapper.C:425:45: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 425 | for (atom_it = r1.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/structureMapper.C:448:45: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 448 | for (atom_it = r2.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/structureMapper.C: In member function ‘std::vector >& BALL::StructureMapper::searchPattern(std::vector&, BALL::AtomContainer&, double, double, double, double)’: /<>/source/STRUCTURE/structureMapper.C:556:56: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 556 | for (ac_it = ac.beginAtomContainer(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator; Traits = BALL::AtomContainerIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomContainerIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::AtomContainer; Position = BALL::BidirectionalIterator; Traits = BALL::AtomContainerIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/structureMapper.C: In member function ‘std::vector >& BALL::StructureMapper::searchPattern(std::vector&, BALL::AtomContainer&, double, double, double, double)’: /<>/source/STRUCTURE/structureMapper.C:556:56: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomContainerIteratorTraits>&)’ first required here 556 | for (ac_it = ac.beginAtomContainer(); | ^ /<>/source/STRUCTURE/structureMapper.C: In member function ‘BALL::Matrix4x4 BALL::StructureMapper::mapProteins(BALL::Protein&, BALL::Protein&, std::map&, BALL::Size&, double&, double, double, double)’: /<>/source/STRUCTURE/structureMapper.C:713:44: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 713 | for(atom_it = P1.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/structureMapper.C: In member function ‘BALL::Matrix4x4 BALL::StructureMapper::mapProteins(BALL::Protein&, BALL::Protein&, std::map&, BALL::Size&, double&, double, double, double)’: /<>/source/STRUCTURE/structureMapper.C:713:44: note: synthesized method ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ first required here 713 | for(atom_it = P1.beginAtom(); +atom_it; ++atom_it) | ^ /<>/source/STRUCTURE/structureMapper.C:740:44: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>& BALL::BidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 740 | for(atom_it = P2.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/CONCEPT/bidirectionalIterator.h:9: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:237:76: required from ‘BALL::ForwardIterator& BALL::ForwardIterator::operator=(const BALL::ForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/source/STRUCTURE/structureMapper.C:774:34: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared ‘BALL::HashGridBox3::BoxIteratorTraits& BALL::HashGridBox3::BoxIteratorTraits::operator=(const BALL::HashGridBox3::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/source/STRUCTURE/structureMapper.C:9: /<>/include/BALL/DATATYPE/hashGrid.h:209:25: note: because ‘BALL::HashGridBox3::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = unsigned int]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:237:76: required from ‘BALL::ForwardIterator& BALL::ForwardIterator::operator=(const BALL::ForwardIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/source/STRUCTURE/structureMapper.C:865:40: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared ‘BALL::HashGridBox3 >::BoxIteratorTraits& BALL::HashGridBox3 >::BoxIteratorTraits::operator=(const BALL::HashGridBox3 >::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ /<>/include/BALL/DATATYPE/hashGrid.h:209:25: note: because ‘BALL::HashGridBox3 >::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = BALL::TVector3]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = unsigned int; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = unsigned int; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:563:21: required from ‘void BALL::HashGridBox3::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = unsigned int; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:206:13: required from ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3&) [with Item = unsigned int]’ /<>/include/BALL/CONCEPT/baseIterator.h:190:6: required from ‘BALL::BaseIterator::BaseIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:128:67: required from ‘BALL::ConstForwardIterator::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:298:20: required from ‘BALL::ForwardIterator::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:309:19: required from ‘static BALL::ForwardIterator BALL::ForwardIterator::begin(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/DATATYPE/hashGrid.h:332:29: required from ‘BALL::HashGridBox3::BoxIterator BALL::HashGridBox3::beginBox() [with Item = unsigned int; BoxIterator = BALL::ForwardIterator, BALL::HashGridBox3, unsigned int, BALL::HashGridBox3::BoxIteratorTraits>]’ /<>/source/STRUCTURE/structureMapper.C:774:33: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = BALL::TVector3; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::TVector3; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:563:21: required from ‘void BALL::HashGridBox3::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::TVector3; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:206:13: required from ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3&) [with Item = BALL::TVector3]’ /<>/include/BALL/CONCEPT/baseIterator.h:190:6: required from ‘BALL::BaseIterator::BaseIterator(const Container&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:128:67: required from ‘BALL::ConstForwardIterator::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:298:20: required from ‘BALL::ForwardIterator::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:309:19: required from ‘static BALL::ForwardIterator BALL::ForwardIterator::begin(const Container&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/DATATYPE/hashGrid.h:332:29: required from ‘BALL::HashGridBox3::BoxIterator BALL::HashGridBox3::beginBox() [with Item = BALL::TVector3; BoxIterator = BALL::ForwardIterator >, BALL::HashGridBox3 >, unsigned int, BALL::HashGridBox3 >::BoxIteratorTraits>]’ /<>/source/STRUCTURE/structureMapper.C:865:39: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/surfaceProcessor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/surfaceProcessor.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/surfaceProcessor.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/surfaceProcessor.C.o -c /<>/source/STRUCTURE/surfaceProcessor.C In file included from /<>/include/BALL/STRUCTURE/solventExcludedSurface.h:45, from /<>/include/BALL/STRUCTURE/surfaceProcessor.h:15, from /<>/source/STRUCTURE/surfaceProcessor.C:5: /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = int; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1667:20: required from ‘void BALL::HashGrid3::dump(std::ostream&, BALL::Size) const [with Item = int; std::ostream = std::basic_ostream; BALL::Size = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:1625:7: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/MATHS/common.h:29, from /<>/include/BALL/STRUCTURE/reducedSurface.h:9, from /<>/include/BALL/STRUCTURE/surfaceProcessor.h:12: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {BALL::TSphere3}; _Tp = BALL::TSphere3; _Alloc = std::allocator >]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {BALL::TSphere3}; _Tp = BALL::TSphere3; _Alloc = std::allocator >]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = BALL::TSphere3; _Alloc = std::allocator >]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘virtual BALL::Processor::Result BALL::SurfaceProcessor::operator()(BALL::Atom&)’ at /<>/source/STRUCTURE/surfaceProcessor.C:38:22: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {BALL::TSphere3}; _Tp = BALL::TSphere3; _Alloc = std::allocator >]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = BALL::TSphere3; _Alloc = std::allocator >]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘virtual BALL::Processor::Result BALL::SurfaceProcessor::operator()(BALL::Atom&)’ at /<>/source/STRUCTURE/surfaceProcessor.C:42:22: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangle.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/triangle.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/triangle.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/triangle.C.o -c /<>/source/STRUCTURE/triangle.C [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangleEdge.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/triangleEdge.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/triangleEdge.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/triangleEdge.C.o -c /<>/source/STRUCTURE/triangleEdge.C [ 87%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/trianglePoint.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/trianglePoint.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/trianglePoint.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/trianglePoint.C.o -c /<>/source/STRUCTURE/trianglePoint.C [ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSAS.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSAS.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSAS.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSAS.C.o -c /<>/source/STRUCTURE/triangulatedSAS.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/STRUCTURE/triangulatedSAS.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/STRUCTURE/triangulatedSAS.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/triangulatedSAS.C: In member function ‘void BALL::SASTriangulator::onePointOutside(BALL::Index, BALL::Triangle*, BALL::TriangulatedSurface&, BALL::HashGrid3&)’: /<>/source/STRUCTURE/triangulatedSAS.C:426:32: warning: variable ‘v2’ set but not used [-Wunused-but-set-variable] 426 | TrianglePoint* v2; | ^~ In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/CONCEPT/bidirectionalIterator.h:9: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/source/STRUCTURE/triangulatedSAS.C:583:27: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared ‘BALL::HashGridBox3::BoxIteratorTraits& BALL::HashGridBox3::BoxIteratorTraits::operator=(const BALL::HashGridBox3::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/STRUCTURE/triangulatedSAS.h:49, from /<>/source/STRUCTURE/triangulatedSAS.C:15: /<>/include/BALL/DATATYPE/hashGrid.h:209:25: note: because ‘BALL::HashGridBox3::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = BALL::TrianglePoint*]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = BALL::TrianglePoint*; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::TrianglePoint*; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:563:21: required from ‘void BALL::HashGridBox3::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::TrianglePoint*; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:206:13: required from ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3&) [with Item = BALL::TrianglePoint*]’ /<>/include/BALL/CONCEPT/baseIterator.h:190:6: required from ‘BALL::BaseIterator::BaseIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:128:67: required from ‘BALL::ConstForwardIterator::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:298:20: required from ‘BALL::ForwardIterator::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:309:19: required from ‘static BALL::ForwardIterator BALL::ForwardIterator::begin(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/DATATYPE/hashGrid.h:332:29: required from ‘BALL::HashGridBox3::BoxIterator BALL::HashGridBox3::beginBox() [with Item = BALL::TrianglePoint*; BoxIterator = BALL::ForwardIterator, BALL::HashGridBox3, unsigned int, BALL::HashGridBox3::BoxIteratorTraits>]’ /<>/source/STRUCTURE/triangulatedSAS.C:583:26: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSES.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSES.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSES.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSES.C.o -c /<>/source/STRUCTURE/triangulatedSES.C In file included from /<>/include/BALL/STRUCTURE/solventExcludedSurface.h:45, from /<>/source/STRUCTURE/triangulatedSES.C:5: /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = int; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1667:20: required from ‘void BALL::HashGrid3::dump(std::ostream&, BALL::Size) const [with Item = int; std::ostream = std::basic_ostream; BALL::Size = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:1625:7: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/STRUCTURE/graphEdge.h:9, from /<>/include/BALL/STRUCTURE/SESEdge.h:9, from /<>/include/BALL/STRUCTURE/solventExcludedSurface.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const BALL::TVector3&}; _Tp = BALL::TVector3; _Alloc = std::allocator >]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::TVector3; _Alloc = std::allocator >]’, inlined from ‘void BALL::SESTriangulator::partitionNonFreeSingularEdge(BALL::SESEdge*)’ at /<>/source/STRUCTURE/triangulatedSES.C:640:19: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::TVector3; _Alloc = std::allocator >]’, inlined from ‘void BALL::SESTriangulator::triangulateSingularToricFace(BALL::SESFace*, const double&)’ at /<>/source/STRUCTURE/triangulatedSES.C:503:20: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSurface.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSurface.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSurface.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/triangulatedSurface.C.o -c /<>/source/STRUCTURE/triangulatedSurface.C [ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/UCK.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/UCK.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/UCK.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/UCK.C.o -c /<>/source/STRUCTURE/UCK.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/STRUCTURE/UCK.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/residueRotamerSet.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/residueRotamerSet.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/residueRotamerSet.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/residueRotamerSet.C.o -c /<>/source/STRUCTURE/residueRotamerSet.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/STRUCTURE/structureMapper.h:25, from /<>/source/STRUCTURE/residueRotamerSet.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/STRUCTURE/residueRotamerSet.h:17, from /<>/source/STRUCTURE/residueRotamerSet.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueRotamerSet.C: In member function ‘BALL::Rotamer BALL::ResidueRotamerSet::getRotamer(const BALL::Residue&) const’: /<>/source/STRUCTURE/residueRotamerSet.C:636:58: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 636 | for (atom_it = residue.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueRotamerSet.C:671:58: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 671 | for (atom_it = residue.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueRotamerSet.C:706:58: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 706 | for (atom_it = residue.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/STRUCTURE/residueRotamerSet.C:741:58: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 741 | for (atom_it = residue.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/rotamerLibrary.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/rotamerLibrary.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/rotamerLibrary.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/rotamerLibrary.C.o -c /<>/source/STRUCTURE/rotamerLibrary.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/STRUCTURE/fragmentDB.h:13, from /<>/include/BALL/STRUCTURE/rotamerLibrary.h:9, from /<>/source/STRUCTURE/rotamerLibrary.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/RMSDMinimizer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/RMSDMinimizer.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/RMSDMinimizer.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/RMSDMinimizer.C.o -c /<>/source/STRUCTURE/RMSDMinimizer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/STRUCTURE/atomBijection.h:13, from /<>/include/BALL/STRUCTURE/RMSDMinimizer.h:9, from /<>/source/STRUCTURE/RMSDMinimizer.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserParser.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserParser.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserParser.C.o -c /<>/build/source/STRUCTURE/smilesParserParser.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from source/STRUCTURE/smilesParserParser.y:3: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserLexer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserLexer.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserLexer.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/smilesParserLexer.C.o -c /<>/build/source/STRUCTURE/smilesParserLexer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/include/BALL/STRUCTURE/smilesParser.h:17, from source/STRUCTURE/smilesParserLexer.l:2: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/STRUCTURE/smilesParser.h:13: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/build/source/STRUCTURE/smilesParserLexer.C: At global scope: /<>/build/source/STRUCTURE/smilesParserLexer.C:1933:24: warning: ‘void yy_fatal_error(const char*)’ defined but not used [-Wunused-function] 1933 | static void yynoreturn yy_fatal_error (const char* msg ) | ^~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserParser.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserParser.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserParser.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserParser.C.o -c /<>/build/source/STRUCTURE/smartsParserParser.C source/STRUCTURE/smartsParserParser.y: In function ‘int SmartsParserparse()’: source/STRUCTURE/smartsParserParser.y:369:29: warning: implicitly-declared ‘constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)’ is deprecated [-Wdeprecated-copy] In file included from source/STRUCTURE/smartsParserParser.y:3: /<>/include/BALL/STRUCTURE/smartsParser.h:246:54: note: because ‘BALL::SmartsParser::SPAtom::Property’ has user-provided ‘void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)’ 246 | void operator = (const Property& rhs); | ^~~~~~~~ /<>/include/BALL/STRUCTURE/smartsParser.h:334:59: note: initializing argument 1 of ‘void BALL::SmartsParser::SPAtom::setProperty(Property)’ 334 | void setProperty(Property property); | ~~~~~~~~~^~~~~~~~ source/STRUCTURE/smartsParserParser.y:375:29: warning: implicitly-declared ‘constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)’ is deprecated [-Wdeprecated-copy] /<>/include/BALL/STRUCTURE/smartsParser.h:246:54: note: because ‘BALL::SmartsParser::SPAtom::Property’ has user-provided ‘void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)’ 246 | void operator = (const Property& rhs); | ^~~~~~~~ /<>/include/BALL/STRUCTURE/smartsParser.h:334:59: note: initializing argument 1 of ‘void BALL::SmartsParser::SPAtom::setProperty(Property)’ 334 | void setProperty(Property property); | ~~~~~~~~~^~~~~~~~ source/STRUCTURE/smartsParserParser.y:380:33: warning: implicitly-declared ‘constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)’ is deprecated [-Wdeprecated-copy] /<>/include/BALL/STRUCTURE/smartsParser.h:246:54: note: because ‘BALL::SmartsParser::SPAtom::Property’ has user-provided ‘void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)’ 246 | void operator = (const Property& rhs); | ^~~~~~~~ /<>/include/BALL/STRUCTURE/smartsParser.h:334:59: note: initializing argument 1 of ‘void BALL::SmartsParser::SPAtom::setProperty(Property)’ 334 | void setProperty(Property property); | ~~~~~~~~~^~~~~~~~ source/STRUCTURE/smartsParserParser.y:386:33: warning: implicitly-declared ‘constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)’ is deprecated [-Wdeprecated-copy] /<>/include/BALL/STRUCTURE/smartsParser.h:246:54: note: because ‘BALL::SmartsParser::SPAtom::Property’ has user-provided ‘void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)’ 246 | void operator = (const Property& rhs); | ^~~~~~~~ /<>/include/BALL/STRUCTURE/smartsParser.h:334:59: note: initializing argument 1 of ‘void BALL::SmartsParser::SPAtom::setProperty(Property)’ 334 | void setProperty(Property property); | ~~~~~~~~~^~~~~~~~ source/STRUCTURE/smartsParserParser.y:472:33: warning: implicitly-declared ‘constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)’ is deprecated [-Wdeprecated-copy] /<>/include/BALL/STRUCTURE/smartsParser.h:246:54: note: because ‘BALL::SmartsParser::SPAtom::Property’ has user-provided ‘void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)’ 246 | void operator = (const Property& rhs); | ^~~~~~~~ /<>/include/BALL/STRUCTURE/smartsParser.h:334:59: note: initializing argument 1 of ‘void BALL::SmartsParser::SPAtom::setProperty(Property)’ 334 | void setProperty(Property property); | ~~~~~~~~~^~~~~~~~ source/STRUCTURE/smartsParserParser.y:513:33: warning: implicitly-declared ‘constexpr BALL::SmartsParser::SPAtom::Property::Property(const BALL::SmartsParser::SPAtom::Property&)’ is deprecated [-Wdeprecated-copy] /<>/include/BALL/STRUCTURE/smartsParser.h:246:54: note: because ‘BALL::SmartsParser::SPAtom::Property’ has user-provided ‘void BALL::SmartsParser::SPAtom::Property::operator=(const BALL::SmartsParser::SPAtom::Property&)’ 246 | void operator = (const Property& rhs); | ^~~~~~~~ /<>/include/BALL/STRUCTURE/smartsParser.h:334:59: note: initializing argument 1 of ‘void BALL::SmartsParser::SPAtom::setProperty(Property)’ 334 | void setProperty(Property property); | ~~~~~~~~~^~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserLexer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserLexer.C.o -MF CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserLexer.C.o.d -o CMakeFiles/BALL.dir/source/STRUCTURE/smartsParserLexer.C.o -c /<>/build/source/STRUCTURE/smartsParserLexer.C /<>/build/source/STRUCTURE/smartsParserLexer.C:2023:24: warning: ‘void yy_fatal_error(const char*)’ defined but not used [-Wunused-function] 2023 | static void yynoreturn yy_fatal_error (const char* msg ) | ^~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformation.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformation.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformation.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformation.C.o -c /<>/source/DOCKING/COMMON/conformation.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/conformation.h:8, from /<>/source/DOCKING/COMMON/conformation.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/constraints.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/constraints.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/constraints.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/constraints.C.o -c /<>/source/DOCKING/COMMON/constraints.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/constraints.h:22, from /<>/source/DOCKING/COMMON/constraints.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DOCKING/COMMON/constraints.h:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformationSet.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformationSet.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformationSet.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/conformationSet.C.o -c /<>/source/DOCKING/COMMON/conformationSet.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/source/DOCKING/COMMON/conformationSet.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/COMMON/macros.h:10, from /<>/include/BALL/DATATYPE/string.h:18, from /<>/include/BALL/DATATYPE/hashMap.h:13, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const BALL::SnapShot&}; _Tp = BALL::SnapShot; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::SnapShot; _Alloc = std::allocator]’, inlined from ‘void BALL::ConformationSet::add(float, const BALL::System&)’ at /<>/source/DOCKING/COMMON/conformationSet.C:44:24: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::SnapShot; _Alloc = std::allocator]’, inlined from ‘bool BALL::ConformationSet::readDCDFile(const BALL::String&)’ at /<>/source/DOCKING/COMMON/conformationSet.C:128:25: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockingAlgorithm.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockingAlgorithm.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockingAlgorithm.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockingAlgorithm.C.o -c /<>/source/DOCKING/COMMON/dockingAlgorithm.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14, from /<>/source/DOCKING/COMMON/dockingAlgorithm.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/DOCKING/COMMON/dockingAlgorithm.C: In member function ‘virtual double BALL::DockingAlgorithm::dockLigand(BALL::AtomContainer&, bool)’: /<>/source/DOCKING/COMMON/dockingAlgorithm.C:304:60: warning: unused parameter ‘ligand’ [-Wunused-parameter] 304 | double DockingAlgorithm::dockLigand(AtomContainer& ligand, bool verbose) | ~~~~~~~~~~~~~~~^~~~~~ /<>/source/DOCKING/COMMON/dockingAlgorithm.C:304:73: warning: unused parameter ‘verbose’ [-Wunused-parameter] 304 | double DockingAlgorithm::dockLigand(AtomContainer& ligand, bool verbose) | ~~~~~^~~~~~~ /<>/source/DOCKING/COMMON/dockingAlgorithm.C: In member function ‘void BALL::DockingAlgorithm::processMultiMoleculeFile(std::string, std::string, double, std::vector*, BALL::String, BALL::String)’: /<>/source/DOCKING/COMMON/dockingAlgorithm.C:549:65: warning: catching polymorphic type ‘class BALL::Exception::GeneralException’ by value [-Wcatch-value=] 549 | catch(BALL::Exception::GeneralException e) | ^ /<>/source/DOCKING/COMMON/dockingAlgorithm.C: In static member function ‘static BALL::Matrix4x4 BALL::DockingAlgorithm::mapCompounds(const BALL::AtomContainer&, const BALL::AtomContainer&, BALL::Size&, double&, double, double, double)’: /<>/source/DOCKING/COMMON/dockingAlgorithm.C:655:45: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 655 | for (atom_it = S1.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/DOCKING/COMMON/dockingAlgorithm.C:680:45: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 680 | for (atom_it = S2.beginAtom(); +atom_it; ++atom_it) | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::AtomIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Atom; Position = BALL::BidirectionalIterator; Traits = BALL::AtomIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/forwardIterator.h:9, from /<>/include/BALL/DATATYPE/hashSet.h:17, from /<>/include/BALL/SYSTEM/file.h:16, from /<>/include/BALL/FORMAT/paramFile.h:8, from /<>/include/BALL/DATATYPE/options.h:22: /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:237:76: required from ‘BALL::ForwardIterator& BALL::ForwardIterator::operator=(const BALL::ForwardIterator&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/source/DOCKING/COMMON/dockingAlgorithm.C:713:36: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared ‘BALL::HashGridBox3::BoxIteratorTraits& BALL::HashGridBox3::BoxIteratorTraits::operator=(const BALL::HashGridBox3::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/COMMON/constraints.h:26, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:30: /<>/include/BALL/DATATYPE/hashGrid.h:209:25: note: because ‘BALL::HashGridBox3::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = unsigned int]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/baseIterator.h: In instantiation of ‘BALL::BaseIterator& BALL::BaseIterator::operator=(const BALL::BaseIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’: /<>/include/BALL/CONCEPT/forwardIterator.h:63:68: required from ‘BALL::ConstForwardIterator& BALL::ConstForwardIterator::operator=(const BALL::ConstForwardIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:237:76: required from ‘BALL::ForwardIterator& BALL::ForwardIterator::operator=(const BALL::ForwardIterator&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/source/DOCKING/COMMON/dockingAlgorithm.C:798:38: required from here /<>/include/BALL/CONCEPT/baseIterator.h:111:33: warning: implicitly-declared ‘BALL::HashGridBox3 >::BoxIteratorTraits& BALL::HashGridBox3 >::BoxIteratorTraits::operator=(const BALL::HashGridBox3 >::BoxIteratorTraits&)’ is deprecated [-Wdeprecated-copy] 111 | traits_ = iterator.traits_; | ~~~~~~~~^~~~~~~~~~~~~~~~~~ /<>/include/BALL/DATATYPE/hashGrid.h:209:25: note: because ‘BALL::HashGridBox3 >::BoxIteratorTraits’ has user-provided ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3::BoxIteratorTraits&, bool) [with Item = BALL::TVector3]’ 209 | BoxIteratorTraits(const BoxIteratorTraits& traits, bool /* deep */ = true) | ^~~~~~~~~~~~~~~~~ /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = unsigned int; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = unsigned int; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:563:21: required from ‘void BALL::HashGridBox3::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = unsigned int; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:206:13: required from ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3&) [with Item = unsigned int]’ /<>/include/BALL/CONCEPT/baseIterator.h:190:6: required from ‘BALL::BaseIterator::BaseIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:128:67: required from ‘BALL::ConstForwardIterator::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:298:20: required from ‘BALL::ForwardIterator::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:309:19: required from ‘static BALL::ForwardIterator BALL::ForwardIterator::begin(const Container&) [with Container = BALL::HashGridBox3; DataType = BALL::HashGridBox3; Position = unsigned int; Traits = BALL::HashGridBox3::BoxIteratorTraits]’ /<>/include/BALL/DATATYPE/hashGrid.h:332:29: required from ‘BALL::HashGridBox3::BoxIterator BALL::HashGridBox3::beginBox() [with Item = unsigned int; BoxIterator = BALL::ForwardIterator, BALL::HashGridBox3, unsigned int, BALL::HashGridBox3::BoxIteratorTraits>]’ /<>/source/DOCKING/COMMON/dockingAlgorithm.C:713:35: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] 1726 | if ((&box < &box_[0]) || (&box - &box_[0] >= getSize())) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /<>/include/BALL/DATATYPE/hashGrid.h: In instantiation of ‘BALL::Index BALL::HashGrid3::getIndex_(const BALL::HashGridBox3&) const [with Item = BALL::TVector3; BALL::Index = int]’: /<>/include/BALL/DATATYPE/hashGrid.h:1516:17: required from ‘bool BALL::HashGrid3::getIndices(const BALL::HashGridBox3&, BALL::Position&, BALL::Position&, BALL::Position&) const [with Item = BALL::TVector3; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:563:21: required from ‘void BALL::HashGridBox3::getIndices(BALL::Position&, BALL::Position&, BALL::Position&) [with Item = BALL::TVector3; BALL::Position = unsigned int]’ /<>/include/BALL/DATATYPE/hashGrid.h:206:13: required from ‘BALL::HashGridBox3::BoxIteratorTraits::BoxIteratorTraits(const BALL::HashGridBox3&) [with Item = BALL::TVector3]’ /<>/include/BALL/CONCEPT/baseIterator.h:190:6: required from ‘BALL::BaseIterator::BaseIterator(const Container&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:128:67: required from ‘BALL::ConstForwardIterator::ConstForwardIterator(const Container&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:298:20: required from ‘BALL::ForwardIterator::ForwardIterator(const Container&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/CONCEPT/forwardIterator.h:309:19: required from ‘static BALL::ForwardIterator BALL::ForwardIterator::begin(const Container&) [with Container = BALL::HashGridBox3 >; DataType = BALL::HashGridBox3 >; Position = unsigned int; Traits = BALL::HashGridBox3 >::BoxIteratorTraits]’ /<>/include/BALL/DATATYPE/hashGrid.h:332:29: required from ‘BALL::HashGridBox3::BoxIterator BALL::HashGridBox3::beginBox() [with Item = BALL::TVector3; BoxIterator = BALL::ForwardIterator >, BALL::HashGridBox3 >, unsigned int, BALL::HashGridBox3 >::BoxIteratorTraits>]’ /<>/source/DOCKING/COMMON/dockingAlgorithm.C:798:37: required from here /<>/include/BALL/DATATYPE/hashGrid.h:1726:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘BALL::Size’ {aka ‘unsigned int’} [-Wsign-compare] [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockResult.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockResult.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockResult.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/dockResult.C.o -c /<>/source/DOCKING/COMMON/dockResult.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/secondaryStructure.h:9, from /<>/include/BALL/FORMAT/PDBdefs.h:17, from /<>/include/BALL/FORMAT/PDBFile.h:25, from /<>/source/DOCKING/COMMON/dockResult.C:8: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/DATATYPE/bitVector.h:13, from /<>/include/BALL/CONCEPT/property.h:15, from /<>/include/BALL/FORMAT/PDBFile.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/DOCKING/COMMON/dockResult.C: In member function ‘bool BALL::DockResult::readDockResult(std::istream&)’: /<>/source/DOCKING/COMMON/dockResult.C:402:59: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 402 | catch (Exception::InvalidFormat) | ^~~~~~~~~~~~~ /<>/source/DOCKING/COMMON/dockResult.C:419:59: warning: catching polymorphic type ‘class BALL::Exception::InvalidFormat’ by value [-Wcatch-value=] 419 | catch (Exception::InvalidFormat) | ^~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexDefinition.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexDefinition.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexDefinition.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexDefinition.C.o -c /<>/source/DOCKING/COMMON/flexDefinition.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/flexDefinition.h:9, from /<>/source/DOCKING/COMMON/flexDefinition.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexibleMolecule.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexibleMolecule.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexibleMolecule.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/flexibleMolecule.C.o -c /<>/source/DOCKING/COMMON/flexibleMolecule.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/include/BALL/DOCKING/COMMON/flexibleMolecule.h:9, from /<>/source/DOCKING/COMMON/flexibleMolecule.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/gridAnalysis.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/gridAnalysis.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/gridAnalysis.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/gridAnalysis.C.o -c /<>/source/DOCKING/COMMON/gridAnalysis.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/DOCKING/COMMON/gridAnalysis.h:9, from /<>/source/DOCKING/COMMON/gridAnalysis.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/poseClustering.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/poseClustering.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/poseClustering.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/poseClustering.C.o -c /<>/source/DOCKING/COMMON/poseClustering.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/conformationSet.h:13, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:13, from /<>/source/DOCKING/COMMON/poseClustering.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/DOCKING/COMMON/poseClustering.C: In member function ‘bool BALL::PoseClustering::nearestNeighborChainCompute_()’: /<>/source/DOCKING/COMMON/poseClustering.C:927:22: warning: unused variable ‘run_parallel’ [-Wunused-variable] 927 | bool run_parallel = options.getBool(PoseClustering::Option::RUN_PARALLEL); | ^~~~~~~~~~~~ In file included from /usr/include/boost/graph/detail/adjacency_list.hpp:35, from /usr/include/boost/graph/adjacency_list.hpp:255, from /<>/include/BALL/DOCKING/COMMON/poseClustering.h:53: In member function ‘bool boost::detail::adj_list_edge_iterator::operator!=(const self&) const [with VertexIterator = boost::range_detail::integer_iterator; OutEdgeIterator = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>; Graph = boost::adjacency_list]’, inlined from ‘void boost::write_graphviz(std::ostream&, const Graph&, VertexPropertiesWriter, EdgePropertiesWriter, GraphPropertiesWriter, VertexID, typename enable_if_c::traversal_category>::value, graph::detail::no_parameter>::type) [with Graph = adjacency_list; VertexPropertiesWriter = BALL::PoseClustering::ClusterTreeWriter_; EdgePropertiesWriter = default_writer; GraphPropertiesWriter = default_writer; VertexID = vec_adj_list_vertex_id_map]’ at /usr/include/boost/graph/graphviz.hpp:284:50: /usr/include/boost/graph/detail/adj_list_edge_iterator.hpp:112:21: warning: ‘*(boost::detail::stored_edge_property* const*)((char*)&edge_end + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::adjacency_list >::edges.boost::optional*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::.boost::optional_detail::optional_base*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::m_storage.boost::optional_detail::aligned_storage*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::dummy_))’ may be used uninitialized [-Wmaybe-uninitialized] 111 | || (vCurr != vEnd | ~~~~~~~~~~~~~~ 112 | && edges BOOST_GRAPH_MEMBER first | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 | != x.edges BOOST_GRAPH_MEMBER first); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/source/DOCKING/COMMON/poseClustering.C:21: /usr/include/boost/graph/graphviz.hpp: In function ‘void boost::write_graphviz(std::ostream&, const Graph&, VertexPropertiesWriter, EdgePropertiesWriter, GraphPropertiesWriter, VertexID, typename enable_if_c::traversal_category>::value, graph::detail::no_parameter>::type) [with Graph = adjacency_list; VertexPropertiesWriter = BALL::PoseClustering::ClusterTreeWriter_; EdgePropertiesWriter = default_writer; GraphPropertiesWriter = default_writer; VertexID = vec_adj_list_vertex_id_map]’: /usr/include/boost/graph/graphviz.hpp:283:55: note: ‘*(boost::detail::stored_edge_property* const*)((char*)&edge_end + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::adjacency_list >::edges.boost::optional*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::.boost::optional_detail::optional_base*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::m_storage.boost::optional_detail::aligned_storage*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::dummy_))’ was declared here 283 | typename graph_traits< Graph >::edge_iterator ei, edge_end; | ^~~~~~~~ In member function ‘boost::detail::adj_list_edge_iterator::self& boost::detail::adj_list_edge_iterator::operator++() [with VertexIterator = boost::range_detail::integer_iterator; OutEdgeIterator = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>; Graph = boost::adjacency_list]’, inlined from ‘void boost::write_graphviz(std::ostream&, const Graph&, VertexPropertiesWriter, EdgePropertiesWriter, GraphPropertiesWriter, VertexID, typename enable_if_c::traversal_category>::value, graph::detail::no_parameter>::type) [with Graph = adjacency_list; VertexPropertiesWriter = BALL::PoseClustering::ClusterTreeWriter_; EdgePropertiesWriter = default_writer; GraphPropertiesWriter = default_writer; VertexID = vec_adj_list_vertex_id_map]’ at /usr/include/boost/graph/graphviz.hpp:284:63: /usr/include/boost/graph/detail/adj_list_edge_iterator.hpp:80:13: warning: ‘((boost::detail::stored_edge_property* const*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::adjacency_list >::edges.boost::optional*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::.boost::optional_detail::optional_base*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::m_storage.boost::optional_detail::aligned_storage*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::dummy_)))[2]’ may be used uninitialized [-Wmaybe-uninitialized] 80 | if (edges BOOST_GRAPH_MEMBER first | ^~ /usr/include/boost/graph/graphviz.hpp: In function ‘void boost::write_graphviz(std::ostream&, const Graph&, VertexPropertiesWriter, EdgePropertiesWriter, GraphPropertiesWriter, VertexID, typename enable_if_c::traversal_category>::value, graph::detail::no_parameter>::type) [with Graph = adjacency_list; VertexPropertiesWriter = BALL::PoseClustering::ClusterTreeWriter_; EdgePropertiesWriter = default_writer; GraphPropertiesWriter = default_writer; VertexID = vec_adj_list_vertex_id_map]’: /usr/include/boost/graph/graphviz.hpp:283:51: note: ‘((boost::detail::stored_edge_property* const*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::adjacency_list >::edges.boost::optional*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::.boost::optional_detail::optional_base*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::m_storage.boost::optional_detail::aligned_storage*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::dummy_)))[2]’ was declared here 283 | typename graph_traits< Graph >::edge_iterator ei, edge_end; | ^~ In member function ‘EdgeDescriptor boost::detail::out_edge_iter::dereference() const [with BaseIter = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; VertexDescriptor = unsigned int; EdgeDescriptor = boost::detail::edge_desc_impl; Difference = int]’, inlined from ‘static typename Facade::reference boost::iterators::iterator_core_access::dereference(const Facade&) [with Facade = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>]’ at /usr/include/boost/iterator/iterator_facade.hpp:631:31, inlined from ‘boost::iterators::detail::iterator_facade_base::reference boost::iterators::detail::iterator_facade_base::operator*() const [with Derived = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>; Value = boost::detail::edge_desc_impl; CategoryOrTraversal = boost::iterators::random_access_traversal_tag; Reference = boost::detail::edge_desc_impl; Difference = int]’ at /usr/include/boost/iterator/iterator_facade.hpp:737:53, inlined from ‘boost::detail::adj_list_edge_iterator::value_type boost::detail::adj_list_edge_iterator::operator*() const [with VertexIterator = boost::range_detail::integer_iterator; OutEdgeIterator = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>; Graph = boost::adjacency_list]’ at /usr/include/boost/graph/detail/adj_list_edge_iterator.hpp:99:20, inlined from ‘void boost::write_graphviz(std::ostream&, const Graph&, VertexPropertiesWriter, EdgePropertiesWriter, GraphPropertiesWriter, VertexID, typename enable_if_c::traversal_category>::value, graph::detail::no_parameter>::type) [with Graph = adjacency_list; VertexPropertiesWriter = BALL::PoseClustering::ClusterTreeWriter_; EdgePropertiesWriter = default_writer; GraphPropertiesWriter = default_writer; VertexID = vec_adj_list_vertex_id_map]’ at /usr/include/boost/graph/graphviz.hpp:288:56: /usr/include/boost/graph/detail/adjacency_list.hpp:148:48: warning: ‘*(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::adjacency_list >::edges.boost::optional*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::.boost::optional_detail::optional_base*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::m_storage.boost::optional_detail::aligned_storage*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::dummy_)).__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >::_M_current’ may be used uninitialized [-Wmaybe-uninitialized] 148 | &(*this->base()).get_property()); | ^ /usr/include/boost/graph/graphviz.hpp: In function ‘void boost::write_graphviz(std::ostream&, const Graph&, VertexPropertiesWriter, EdgePropertiesWriter, GraphPropertiesWriter, VertexID, typename enable_if_c::traversal_category>::value, graph::detail::no_parameter>::type) [with Graph = adjacency_list; VertexPropertiesWriter = BALL::PoseClustering::ClusterTreeWriter_; EdgePropertiesWriter = default_writer; GraphPropertiesWriter = default_writer; VertexID = vec_adj_list_vertex_id_map]’: /usr/include/boost/graph/graphviz.hpp:283:51: note: ‘*(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::adjacency_list >::edges.boost::optional*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::.boost::optional_detail::optional_base*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::m_storage.boost::optional_detail::aligned_storage*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::dummy_)).__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >::_M_current’ was declared here 283 | typename graph_traits< Graph >::edge_iterator ei, edge_end; | ^~ In member function ‘bool boost::detail::adj_list_edge_iterator::operator!=(const self&) const [with VertexIterator = boost::range_detail::integer_iterator; OutEdgeIterator = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>; Graph = boost::adjacency_list]’, inlined from ‘void boost::vec_adj_list_impl::copy_impl(const boost::vec_adj_list_impl&) [with Graph = boost::adjacency_list; Config = boost::detail::adj_list_gen, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config; Base = boost::directed_graph_helper, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config>]’ at /usr/include/boost/graph/detail/adjacency_list.hpp:2193:52, inlined from ‘boost::vec_adj_list_impl::vec_adj_list_impl(const boost::vec_adj_list_impl&) [with Graph = boost::adjacency_list; Config = boost::detail::adj_list_gen, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config; Base = boost::directed_graph_helper, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config>]’ at /usr/include/boost/graph/detail/adjacency_list.hpp:2123:69, inlined from ‘boost::adjacency_list::adjacency_list(const boost::adjacency_list&) [with OutEdgeListS = boost::vecS; VertexListS = boost::vecS; DirectedS = boost::directedS; VertexProperty = BALL::PoseClustering::ClusterProperties; EdgeProperty = boost::no_property; GraphProperty = unsigned int; EdgeListS = boost::listS]’ at /usr/include/boost/graph/adjacency_list.hpp:321:65, inlined from ‘BALL::PoseClustering::PoseClustering(const BALL::PoseClustering&)’ at /<>/include/BALL/DOCKING/COMMON/poseClustering.h:126:21: /usr/include/boost/graph/detail/adj_list_edge_iterator.hpp:112:21: warning: ‘*(boost::detail::stored_edge_property* const*)((char*)&ei_end + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::adjacency_list >::edges.boost::optional*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::.boost::optional_detail::optional_base*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::m_storage.boost::optional_detail::aligned_storage*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::dummy_))’ may be used uninitialized [-Wmaybe-uninitialized] 111 | || (vCurr != vEnd | ~~~~~~~~~~~~~~ 112 | && edges BOOST_GRAPH_MEMBER first | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 | != x.edges BOOST_GRAPH_MEMBER first); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/graph/detail/adjacency_list.hpp: In copy constructor ‘BALL::PoseClustering::PoseClustering(const BALL::PoseClustering&)’: /usr/include/boost/graph/detail/adjacency_list.hpp:2192:27: note: ‘*(boost::detail::stored_edge_property* const*)((char*)&ei_end + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::adjacency_list >::edges.boost::optional*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::.boost::optional_detail::optional_base*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::m_storage.boost::optional_detail::aligned_storage*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::dummy_))’ was declared here 2192 | edge_iterator ei, ei_end; | ^~~~~~ In file included from /usr/include/c++/13/string:51, from /<>/include/BALL/COMMON/debug.h:18, from /<>/include/BALL/common.h:16, from /<>/include/BALL/DATATYPE/options.h:11: In function ‘const _Tp& std::max(const _Tp&, const _Tp&) [with _Tp = unsigned int]’, inlined from ‘std::pair boost::add_edge(typename Config::vertex_descriptor, typename Config::vertex_descriptor, const typename Config::edge_property_type&, vec_adj_list_impl&) [with Graph = adjacency_list; Config = detail::adj_list_gen, vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int, listS>::config; Base = directed_graph_helper, vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int, listS>::config>]’ at /usr/include/boost/graph/detail/adjacency_list.hpp:2259:47, inlined from ‘std::pair boost::add_edge(typename Config::vertex_descriptor, typename Config::vertex_descriptor, vec_adj_list_impl&) [with Graph = adjacency_list; Config = detail::adj_list_gen, vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int, listS>::config; Base = directed_graph_helper, vecS, vecS, directedS, BALL::PoseClustering::ClusterProperties, no_property, unsigned int, listS>::config>]’ at /usr/include/boost/graph/detail/adjacency_list.hpp:2271:20, inlined from ‘void boost::vec_adj_list_impl::copy_impl(const boost::vec_adj_list_impl&) [with Graph = boost::adjacency_list; Config = boost::detail::adj_list_gen, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config; Base = boost::directed_graph_helper, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config>]’ at /usr/include/boost/graph/detail/adjacency_list.hpp:2198:27, inlined from ‘boost::vec_adj_list_impl::vec_adj_list_impl(const boost::vec_adj_list_impl&) [with Graph = boost::adjacency_list; Config = boost::detail::adj_list_gen, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config; Base = boost::directed_graph_helper, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config>]’ at /usr/include/boost/graph/detail/adjacency_list.hpp:2123:69, inlined from ‘boost::adjacency_list::adjacency_list(const boost::adjacency_list&) [with OutEdgeListS = boost::vecS; VertexListS = boost::vecS; DirectedS = boost::directedS; VertexProperty = BALL::PoseClustering::ClusterProperties; EdgeProperty = boost::no_property; GraphProperty = unsigned int; EdgeListS = boost::listS]’ at /usr/include/boost/graph/adjacency_list.hpp:321:65, inlined from ‘BALL::PoseClustering::PoseClustering(const BALL::PoseClustering&)’ at /<>/include/BALL/DOCKING/COMMON/poseClustering.h:126:21: /usr/include/c++/13/bits/stl_algobase.h:262:7: warning: ‘*(const boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::adjacency_list >::edges.boost::optional*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::.boost::optional_detail::optional_base*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::m_storage.boost::optional_detail::aligned_storage*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::dummy_)).boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>::m_src’ may be used uninitialized [-Wmaybe-uninitialized] 262 | if (__a < __b) | ^~ /usr/include/boost/graph/detail/adjacency_list.hpp: In copy constructor ‘BALL::PoseClustering::PoseClustering(const BALL::PoseClustering&)’: /usr/include/boost/graph/detail/adjacency_list.hpp:2192:23: note: ‘*(const boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::adjacency_list >::edges.boost::optional*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::.boost::optional_detail::optional_base*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::m_storage.boost::optional_detail::aligned_storage*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::dummy_)).boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>::m_src’ was declared here 2192 | edge_iterator ei, ei_end; | ^~ In member function ‘boost::detail::adj_list_edge_iterator::self& boost::detail::adj_list_edge_iterator::operator++() [with VertexIterator = boost::range_detail::integer_iterator; OutEdgeIterator = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>; Graph = boost::adjacency_list]’, inlined from ‘void boost::vec_adj_list_impl::copy_impl(const boost::vec_adj_list_impl&) [with Graph = boost::adjacency_list; Config = boost::detail::adj_list_gen, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config; Base = boost::directed_graph_helper, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config>]’ at /usr/include/boost/graph/detail/adjacency_list.hpp:2193:63, inlined from ‘boost::vec_adj_list_impl::vec_adj_list_impl(const boost::vec_adj_list_impl&) [with Graph = boost::adjacency_list; Config = boost::detail::adj_list_gen, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config; Base = boost::directed_graph_helper, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config>]’ at /usr/include/boost/graph/detail/adjacency_list.hpp:2123:69, inlined from ‘boost::adjacency_list::adjacency_list(const boost::adjacency_list&) [with OutEdgeListS = boost::vecS; VertexListS = boost::vecS; DirectedS = boost::directedS; VertexProperty = BALL::PoseClustering::ClusterProperties; EdgeProperty = boost::no_property; GraphProperty = unsigned int; EdgeListS = boost::listS]’ at /usr/include/boost/graph/adjacency_list.hpp:321:65, inlined from ‘BALL::PoseClustering::PoseClustering(const BALL::PoseClustering&)’ at /<>/include/BALL/DOCKING/COMMON/poseClustering.h:126:21: /usr/include/boost/graph/detail/adj_list_edge_iterator.hpp:80:13: warning: ‘((boost::detail::stored_edge_property* const*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::adjacency_list >::edges.boost::optional*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::.boost::optional_detail::optional_base*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::m_storage.boost::optional_detail::aligned_storage*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::dummy_)))[2]’ may be used uninitialized [-Wmaybe-uninitialized] 80 | if (edges BOOST_GRAPH_MEMBER first | ^~ /usr/include/boost/graph/detail/adjacency_list.hpp: In copy constructor ‘BALL::PoseClustering::PoseClustering(const BALL::PoseClustering&)’: /usr/include/boost/graph/detail/adjacency_list.hpp:2192:23: note: ‘((boost::detail::stored_edge_property* const*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::adjacency_list >::edges.boost::optional*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::.boost::optional_detail::optional_base*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::m_storage.boost::optional_detail::aligned_storage*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::dummy_)))[2]’ was declared here 2192 | edge_iterator ei, ei_end; | ^~ In member function ‘bool boost::detail::adj_list_edge_iterator::operator!=(const self&) const [with VertexIterator = boost::range_detail::integer_iterator; OutEdgeIterator = boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>; Graph = boost::adjacency_list]’, inlined from ‘void boost::vec_adj_list_impl::copy_impl(const boost::vec_adj_list_impl&) [with Graph = boost::adjacency_list; Config = boost::detail::adj_list_gen, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config; Base = boost::directed_graph_helper, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config>]’ at /usr/include/boost/graph/detail/adjacency_list.hpp:2193:52, inlined from ‘boost::vec_adj_list_impl::vec_adj_list_impl(const boost::vec_adj_list_impl&) [with Graph = boost::adjacency_list; Config = boost::detail::adj_list_gen, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config; Base = boost::directed_graph_helper, boost::vecS, boost::vecS, boost::directedS, BALL::PoseClustering::ClusterProperties, boost::no_property, unsigned int, boost::listS>::config>]’ at /usr/include/boost/graph/detail/adjacency_list.hpp:2123:69, inlined from ‘boost::adjacency_list::adjacency_list(const boost::adjacency_list&) [with OutEdgeListS = boost::vecS; VertexListS = boost::vecS; DirectedS = boost::directedS; VertexProperty = BALL::PoseClustering::ClusterProperties; EdgeProperty = boost::no_property; GraphProperty = unsigned int; EdgeListS = boost::listS]’ at /usr/include/boost/graph/adjacency_list.hpp:321:65, inlined from ‘BALL::PoseClustering::PoseClustering(const BALL::PoseClustering&)’ at /<>/include/BALL/DOCKING/COMMON/poseClustering.h:126:21: /usr/include/boost/graph/detail/adj_list_edge_iterator.hpp:112:21: warning: ‘*(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::adjacency_list >::edges.boost::optional*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::.boost::optional_detail::optional_base*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::m_storage.boost::optional_detail::aligned_storage*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::dummy_)).__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >::_M_current’ may be used uninitialized [-Wmaybe-uninitialized] 111 | || (vCurr != vEnd | ~~~~~~~~~~~~~~ 112 | && edges BOOST_GRAPH_MEMBER first | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 | != x.edges BOOST_GRAPH_MEMBER first); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/graph/detail/adjacency_list.hpp: In copy constructor ‘BALL::PoseClustering::PoseClustering(const BALL::PoseClustering&)’: /usr/include/boost/graph/detail/adjacency_list.hpp:2192:23: note: ‘*(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >*)((char*)&ei + offsetof(boost::detail::edge_iterator, boost::detail::adj_list_edge_iterator, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::adjacency_list >::edges.boost::optional*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::.boost::optional_detail::optional_base*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::m_storage.boost::optional_detail::aligned_storage*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int>, boost::detail::out_edge_iter<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned int, boost::detail::edge_desc_impl, int> > >::dummy_)).__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >::_M_current’ was declared here 2192 | edge_iterator ei, ei_end; | ^~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/receptor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/receptor.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/receptor.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/receptor.C.o -c /<>/source/DOCKING/COMMON/receptor.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/receptor.h:9, from /<>/source/DOCKING/COMMON/receptor.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/result.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/result.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/result.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/result.C.o -c /<>/source/DOCKING/COMMON/result.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/fragment.h:9, from /<>/include/BALL/KERNEL/residue.h:9, from /<>/include/BALL/KERNEL/chain.h:9, from /<>/include/BALL/KERNEL/chainIterator.h:11, from /<>/include/BALL/KERNEL/protein.h:9, from /<>/include/BALL/DOCKING/COMMON/receptor.h:9, from /<>/include/BALL/DOCKING/COMMON/result.h:9, from /<>/source/DOCKING/COMMON/result.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/COMMON/logStream.h:23, from /<>/include/BALL/common.h:36, from /<>/include/BALL/CONCEPT/composite.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const BALL::Result::ResultData&}; _Tp = BALL::Result::ResultData; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::Result::ResultData; _Alloc = std::allocator]’, inlined from ‘void BALL::Result::add(BALL::String, ResultData&)’ at /<>/source/DOCKING/COMMON/result.C:327:41: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::Result::ResultData; _Alloc = std::allocator]’, inlined from ‘std::vector BALL::Result::getOutputConformations(BALL::Ligand*)’ at /<>/source/DOCKING/COMMON/result.C:260:18: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/sideChainOptimizer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/sideChainOptimizer.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/sideChainOptimizer.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/sideChainOptimizer.C.o -c /<>/source/DOCKING/COMMON/sideChainOptimizer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SCORING/COMMON/scoringFunction.h:10, from /<>/include/BALL/DOCKING/COMMON/sideChainOptimizer.h:9, from /<>/source/DOCKING/COMMON/sideChainOptimizer.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/staticLigandFragment.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/staticLigandFragment.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/staticLigandFragment.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/staticLigandFragment.C.o -c /<>/source/DOCKING/COMMON/staticLigandFragment.C [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/COMMON/structurePreparer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/COMMON/structurePreparer.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/COMMON/structurePreparer.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/COMMON/structurePreparer.C.o -c /<>/source/DOCKING/COMMON/structurePreparer.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/DOCKING/COMMON/structurePreparer.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/QSAR/simpleDescriptors.h:10, from /<>/source/DOCKING/COMMON/structurePreparer.C:9: /<>/include/BALL/QSAR/simpleBase.h: At global scope: /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:47:34: note: by ‘BALL::MolecularWeight& BALL::MolecularWeight::operator=(const BALL::MolecularWeight&)’ 47 | MolecularWeight& operator = (const MolecularWeight& mw); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:82:32: note: by ‘BALL::NumberOfBonds& BALL::NumberOfBonds::operator=(const BALL::NumberOfBonds&)’ 82 | NumberOfBonds& operator = (const NumberOfBonds& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:116:38: note: by ‘BALL::NumberOfSingleBonds& BALL::NumberOfSingleBonds::operator=(const BALL::NumberOfSingleBonds&)’ 116 | NumberOfSingleBonds& operator = (const NumberOfSingleBonds& nsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:151:38: note: by ‘BALL::NumberOfDoubleBonds& BALL::NumberOfDoubleBonds::operator=(const BALL::NumberOfDoubleBonds&)’ 151 | NumberOfDoubleBonds& operator = (const NumberOfDoubleBonds& ndb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:186:38: note: by ‘BALL::NumberOfTripleBonds& BALL::NumberOfTripleBonds::operator=(const BALL::NumberOfTripleBonds&)’ 186 | NumberOfTripleBonds& operator = (const NumberOfTripleBonds& ntb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:220:40: note: by ‘BALL::NumberOfAromaticBonds& BALL::NumberOfAromaticBonds::operator=(const BALL::NumberOfAromaticBonds&)’ 220 | NumberOfAromaticBonds& operator = (const NumberOfAromaticBonds& nab); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:254:32: note: by ‘BALL::NumberOfAtoms& BALL::NumberOfAtoms::operator=(const BALL::NumberOfAtoms&)’ 254 | NumberOfAtoms& operator = (const NumberOfAtoms& na); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:288:32: note: by ‘BALL::NumberOfBoron& BALL::NumberOfBoron::operator=(const BALL::NumberOfBoron&)’ 288 | NumberOfBoron& operator = (const NumberOfBoron& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:322:33: note: by ‘BALL::NumberOfCarbon& BALL::NumberOfCarbon::operator=(const BALL::NumberOfCarbon&)’ 322 | NumberOfCarbon& operator = (const NumberOfCarbon& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:356:35: note: by ‘BALL::NumberOfNitrogen& BALL::NumberOfNitrogen::operator=(const BALL::NumberOfNitrogen&)’ 356 | NumberOfNitrogen& operator = (const NumberOfNitrogen& nn); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:389:33: note: by ‘BALL::NumberOfOxygen& BALL::NumberOfOxygen::operator=(const BALL::NumberOfOxygen&)’ 389 | NumberOfOxygen& operator = (const NumberOfOxygen& no); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:423:35: note: by ‘BALL::NumberOfFlourine& BALL::NumberOfFlourine::operator=(const BALL::NumberOfFlourine&)’ 423 | NumberOfFlourine& operator = (const NumberOfFlourine& nf); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:457:37: note: by ‘BALL::NumberOfPhosphorus& BALL::NumberOfPhosphorus::operator=(const BALL::NumberOfPhosphorus&)’ 457 | NumberOfPhosphorus& operator = (const NumberOfPhosphorus& np); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:491:33: note: by ‘BALL::NumberOfSulfur& BALL::NumberOfSulfur::operator=(const BALL::NumberOfSulfur&)’ 491 | NumberOfSulfur& operator = (const NumberOfSulfur& ns); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:525:35: note: by ‘BALL::NumberOfChlorine& BALL::NumberOfChlorine::operator=(const BALL::NumberOfChlorine&)’ 525 | NumberOfChlorine& operator = (const NumberOfChlorine& nc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:559:34: note: by ‘BALL::NumberOfBromine& BALL::NumberOfBromine::operator=(const BALL::NumberOfBromine&)’ 559 | NumberOfBromine& operator = (const NumberOfBromine& nb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:593:33: note: by ‘BALL::NumberOfIodine& BALL::NumberOfIodine::operator=(const BALL::NumberOfIodine&)’ 593 | NumberOfIodine& operator = (const NumberOfIodine& ni); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:627:35: note: by ‘BALL::NumberOfHydrogen& BALL::NumberOfHydrogen::operator=(const BALL::NumberOfHydrogen&)’ 627 | NumberOfHydrogen& operator = (const NumberOfHydrogen& nh); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:661:31: note: by ‘BALL::FormalCharge& BALL::FormalCharge::operator=(const BALL::FormalCharge&)’ 661 | FormalCharge& operator = (const FormalCharge& fc); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:697:37: note: by ‘BALL::NumberOfHeavyAtoms& BALL::NumberOfHeavyAtoms::operator=(const BALL::NumberOfHeavyAtoms&)’ 697 | NumberOfHeavyAtoms& operator = (const NumberOfHeavyAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:736:45: note: by ‘BALL::MeanAtomInformationContent& BALL::MeanAtomInformationContent::operator=(const BALL::MeanAtomInformationContent&)’ 736 | MeanAtomInformationContent& operator = (const MeanAtomInformationContent& maic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:770:41: note: by ‘BALL::AtomInformationContent& BALL::AtomInformationContent::operator=(const BALL::AtomInformationContent&)’ 770 | AtomInformationContent& operator = (const AtomInformationContent& aic); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:812:47: note: by ‘BALL::NumberOfRotatableSingleBonds& BALL::NumberOfRotatableSingleBonds::operator=(const BALL::NumberOfRotatableSingleBonds&)’ 812 | NumberOfRotatableSingleBonds& operator = (const NumberOfRotatableSingleBonds& nrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:848:50: note: by ‘BALL::RelNumberOfRotatableSingleBonds& BALL::RelNumberOfRotatableSingleBonds::operator=(const BALL::RelNumberOfRotatableSingleBonds&)’ 848 | RelNumberOfRotatableSingleBonds& operator = (const RelNumberOfRotatableSingleBonds& rnrsb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:889:40: note: by ‘BALL::NumberOfAromaticAtoms& BALL::NumberOfAromaticAtoms::operator=(const BALL::NumberOfAromaticAtoms&)’ 889 | NumberOfAromaticAtoms& operator = (const NumberOfAromaticAtoms& naa); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:924:37: note: by ‘BALL::NumberOfHeavyBonds& BALL::NumberOfHeavyBonds::operator=(const BALL::NumberOfHeavyBonds&)’ 924 | NumberOfHeavyBonds& operator = (const NumberOfHeavyBonds& nhb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:959:41: note: by ‘BALL::NumberOfRotatableBonds& BALL::NumberOfRotatableBonds::operator=(const BALL::NumberOfRotatableBonds&)’ 959 | NumberOfRotatableBonds& operator = (const NumberOfRotatableBonds& nrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:995:44: note: by ‘BALL::RelNumberOfRotatableBonds& BALL::RelNumberOfRotatableBonds::operator=(const BALL::RelNumberOfRotatableBonds&)’ 995 | RelNumberOfRotatableBonds& operator = (const RelNumberOfRotatableBonds& rnrb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1037:34: note: by ‘BALL::VertexAdjacency& BALL::VertexAdjacency::operator=(const BALL::VertexAdjacency&)’ 1037 | VertexAdjacency& operator = (const VertexAdjacency& va); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1082:42: note: by ‘BALL::VertexAdjacencyEquality& BALL::VertexAdjacencyEquality::operator=(const BALL::VertexAdjacencyEquality&)’ 1082 | VertexAdjacencyEquality& operator = (const VertexAdjacencyEquality& vae); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1147:48: note: by ‘BALL::NumberOfHydrogenBondAcceptors& BALL::NumberOfHydrogenBondAcceptors::operator=(const BALL::NumberOfHydrogenBondAcceptors&)’ 1147 | NumberOfHydrogenBondAcceptors& operator = (const NumberOfHydrogenBondAcceptors& nhba); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1211:45: note: by ‘BALL::NumberOfHydrogenBondDonors& BALL::NumberOfHydrogenBondDonors::operator=(const BALL::NumberOfHydrogenBondDonors&)’ 1211 | NumberOfHydrogenBondDonors& operator = (const NumberOfHydrogenBondDonors& nhbd); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1275:43: note: by ‘BALL::NumberOfHydrophobicAtoms& BALL::NumberOfHydrophobicAtoms::operator=(const BALL::NumberOfHydrophobicAtoms&)’ 1275 | NumberOfHydrophobicAtoms& operator = (const NumberOfHydrophobicAtoms& nha); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1318:39: note: by ‘BALL::BondPolarizabilities& BALL::BondPolarizabilities::operator=(const BALL::BondPolarizabilities&)’ 1318 | BondPolarizabilities& operator = (const BondPolarizabilities& bp); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1353:41: note: by ‘BALL::AtomicPolarizabilities& BALL::AtomicPolarizabilities::operator=(const BALL::AtomicPolarizabilities&)’ 1353 | AtomicPolarizabilities& operator = (const AtomicPolarizabilities& ap); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1387:29: note: by ‘BALL::SizeOfSSSR& BALL::SizeOfSSSR::operator=(const BALL::SizeOfSSSR&)’ 1387 | SizeOfSSSR& operator = (const SizeOfSSSR& sssr); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1422:43: note: by ‘BALL::PrincipalMomentOfInertia& BALL::PrincipalMomentOfInertia::operator=(const BALL::PrincipalMomentOfInertia&)’ 1422 | PrincipalMomentOfInertia& operator = (const PrincipalMomentOfInertia& pmi); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1458:44: note: by ‘BALL::PrincipalMomentOfInertiaX& BALL::PrincipalMomentOfInertiaX::operator=(const BALL::PrincipalMomentOfInertiaX&)’ 1458 | PrincipalMomentOfInertiaX& operator = (const PrincipalMomentOfInertiaX& pmix); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1493:44: note: by ‘BALL::PrincipalMomentOfInertiaY& BALL::PrincipalMomentOfInertiaY::operator=(const BALL::PrincipalMomentOfInertiaY&)’ 1493 | PrincipalMomentOfInertiaY& operator = (const PrincipalMomentOfInertiaY& pmiy); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleBase.h:54:37: warning: ‘virtual BALL::SimpleBase& BALL::SimpleBase::operator=(const BALL::SimpleBase&)’ was hidden [-Woverloaded-virtual=] 54 | virtual SimpleBase& operator = (const SimpleBase& sb); | ^~~~~~~~ /<>/include/BALL/QSAR/simpleDescriptors.h:1529:44: note: by ‘BALL::PrincipalMomentOfInertiaZ& BALL::PrincipalMomentOfInertiaZ::operator=(const BALL::PrincipalMomentOfInertiaZ&)’ 1529 | PrincipalMomentOfInertiaZ& operator = (const PrincipalMomentOfInertiaZ& pmiz); | ^~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/CONCEPT/composite.h:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/source/DOCKING/COMMON/structurePreparer.C:15: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/dockProblem.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/dockProblem.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/dockProblem.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/dockProblem.C.o -c /<>/source/DOCKING/GENETICDOCK/dockProblem.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/molecule.h:9, from /<>/source/DOCKING/GENETICDOCK/dockProblem.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/simpleBox3.h:15, from /<>/include/BALL/FORMAT/HINFile.h:13, from /<>/source/DOCKING/GENETICDOCK/dockProblem.C:5: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/evolutionaryDocking.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/evolutionaryDocking.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/evolutionaryDocking.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/evolutionaryDocking.C.o -c /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:14, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:5: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/regularData3D.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/COMMON/rtti.h:13, from /<>/include/BALL/CONCEPT/persistenceManager.h:9: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:10: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C: In member function ‘virtual void BALL::EvolutionaryDocking::setup(BALL::System&, BALL::ScoringFunction*)’: /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:148:79: warning: ‘new’ of type ‘BALL::DockProblem’ with extended alignment 16 [-Waligned-new=] 148 | dp_ = new DockProblem(ligand, sf, this, post_dock_optimization); | ^ /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:148:79: note: uses ‘void* operator new(std::size_t)’, which does not have an alignment parameter /<>/source/DOCKING/GENETICDOCK/evolutionaryDocking.C:148:79: note: use ‘-faligned-new’ to enable C++17 over-aligned new support [ 93%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/genes.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/genes.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/genes.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/genes.C.o -c /<>/source/DOCKING/GENETICDOCK/genes.C /<>/source/DOCKING/GENETICDOCK/genes.C: In member function ‘virtual BALL::GenericGene* BALL::QuaternionGene::mate(BALL::GenericGene*)’: /<>/source/DOCKING/GENETICDOCK/genes.C:203:54: warning: ‘new’ of type ‘BALL::QuaternionGene’ with extended alignment 16 [-Waligned-new=] 203 | QuaternionGene *result = new QuaternionGene; | ^~~~~~~~~~~~~~ /<>/source/DOCKING/GENETICDOCK/genes.C:203:54: note: uses ‘void* operator new(std::size_t)’, which does not have an alignment parameter /<>/source/DOCKING/GENETICDOCK/genes.C:203:54: note: use ‘-faligned-new’ to enable C++17 over-aligned new support /<>/source/DOCKING/GENETICDOCK/genes.C: In member function ‘virtual BALL::GenericGene* BALL::QuaternionGene::clone()’: /<>/source/DOCKING/GENETICDOCK/genes.C:248:41: warning: ‘new’ of type ‘BALL::QuaternionGene’ with extended alignment 16 [-Waligned-new=] 248 | QuaternionGene *g = new QuaternionGene; | ^~~~~~~~~~~~~~ /<>/source/DOCKING/GENETICDOCK/genes.C:248:41: note: uses ‘void* operator new(std::size_t)’, which does not have an alignment parameter /<>/source/DOCKING/GENETICDOCK/genes.C:248:41: note: use ‘-faligned-new’ to enable C++17 over-aligned new support [100%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticAlgorithm.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticAlgorithm.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticAlgorithm.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticAlgorithm.C.o -c /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/dockProblem.h:13, from /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:10: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/matrix44.h:23, from /<>/include/BALL/MATHS/quaternion.h:8, from /<>/include/BALL/DOCKING/GENETICDOCK/genes.h:9, from /<>/include/BALL/DOCKING/GENETICDOCK/geneticIndividual.h:11, from /<>/include/BALL/DOCKING/GENETICDOCK/geneticAlgorithm.h:9, from /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:9: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:18, from /<>/include/BALL/DOCKING/GENETICDOCK/dockProblem.h:20: /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h: At global scope: /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:81:38: warning: ‘virtual void BALL::DockingAlgorithm::setup(BALL::System&, BALL::System&)’ was hidden [-Woverloaded-virtual=] 81 | virtual void setup(System& receptor, System& ligand); | ^~~~~ /<>/include/BALL/DOCKING/GENETICDOCK/evolutionaryDocking.h:85:30: note: by ‘BALL::EvolutionaryDocking::setup’ 85 | void setup(System & receptor, System & ligand, Options & new_options); | ^~~~~ /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C: In member function ‘bool BALL::GeneticAlgorithm::registerParameter(BALL::GenericParameter*)’: /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:474:57: warning: ‘new’ of type ‘BALL::QuaternionGene’ with extended alignment 16 [-Waligned-new=] 474 | template_individual_.insert(new QuaternionGene); | ^~~~~~~~~~~~~~ /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:474:57: note: uses ‘void* operator new(std::size_t)’, which does not have an alignment parameter /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:474:57: note: use ‘-faligned-new’ to enable C++17 over-aligned new support In file included from /usr/include/c++/13/vector:72, from /<>/include/BALL/DOCKING/GENETICDOCK/geneticIndividual.h:9: /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const BALL::GeneticIndividual&}; _Tp = BALL::GeneticIndividual; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::GeneticIndividual; _Alloc = std::allocator]’, inlined from ‘void BALL::GeneticAlgorithm::cleanPool(std::vector&)’ at /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:318:22: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/13/bits/stl_vector.h:1296:21, inlined from ‘void BALL::GeneticAlgorithm::select(BALL::Size)’ at /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:188:29: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = BALL::GeneticIndividual; _Alloc = std::allocator]’, inlined from ‘void BALL::GeneticAlgorithm::mate()’ at /<>/source/DOCKING/GENETICDOCK/geneticAlgorithm.C:247:17: /usr/include/c++/13/bits/stl_vector.h:1289:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 1289 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ [100%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticIndividual.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticIndividual.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticIndividual.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticIndividual.C.o -c /<>/source/DOCKING/GENETICDOCK/geneticIndividual.C [100%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/parameter.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/parameter.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/parameter.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/parameter.C.o -c /<>/source/DOCKING/GENETICDOCK/parameter.C [100%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBond.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBond.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBond.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBond.C.o -c /<>/source/DOCKING/GENETICDOCK/rotateBond.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/DOCKING/GENETICDOCK/rotateBond.C:9: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/MATHS/matrix44.h:23, from /<>/include/BALL/DOCKING/GENETICDOCK/rotateBond.h:11, from /<>/source/DOCKING/GENETICDOCK/rotateBond.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [100%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBonds.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBonds.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBonds.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBonds.C.o -c /<>/source/DOCKING/GENETICDOCK/rotateBonds.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/KERNEL/bond.h:17, from /<>/source/DOCKING/GENETICDOCK/rotateBonds.C:7: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/source/DOCKING/GENETICDOCK/rotateBonds.C:6: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [100%] Building CXX object CMakeFiles/BALL.dir/source/DOCKING/IMGDOCK/IMGDock.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/DOCKING/IMGDOCK/IMGDock.C.o -MF CMakeFiles/BALL.dir/source/DOCKING/IMGDOCK/IMGDock.C.o.d -o CMakeFiles/BALL.dir/source/DOCKING/IMGDOCK/IMGDock.C.o -c /<>/source/DOCKING/IMGDOCK/IMGDock.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:14, from /<>/include/BALL/DOCKING/IMGDOCK/IMGDock.h:9, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:6: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector3.h:13, from /<>/include/BALL/DATATYPE/options.h:25, from /<>/include/BALL/DOCKING/COMMON/dockingAlgorithm.h:10: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/common.h:20, from /<>/include/BALL/DATATYPE/options.h:11: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/include/BALL/SCORING/FUNCTIONS/gridedPLP.h:10, from /<>/source/DOCKING/IMGDOCK/IMGDock.C:16: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ [100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/binaryFileAdaptor.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/binaryFileAdaptor.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/binaryFileAdaptor.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/binaryFileAdaptor.C.o -c /<>/source/SYSTEM/binaryFileAdaptor.C [100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/directory.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/directory.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/directory.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/directory.C.o -c /<>/source/SYSTEM/directory.C [100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/file.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK 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-fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/file.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/file.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/file.C.o -c /<>/source/SYSTEM/file.C [100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/fileSystem.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/fileSystem.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/fileSystem.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/fileSystem.C.o -c /<>/source/SYSTEM/fileSystem.C [100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/mutex.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK 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-c /<>/source/SYSTEM/mutex.C [100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/networking.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/networking.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/networking.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/networking.C.o -c /<>/source/SYSTEM/networking.C In file included from /usr/include/boost/bind/detail/requires_cxx11.hpp:9, from /usr/include/boost/bind/bind.hpp:24, from /usr/include/boost/bind.hpp:29, from /<>/source/SYSTEM/networking.C:5: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/path.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/path.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/path.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/path.C.o -c /<>/source/SYSTEM/path.C [100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/simpleDownloader.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB 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CMakeFiles/BALL.dir/source/SYSTEM/simpleDownloader.C.o -c /<>/source/SYSTEM/simpleDownloader.C [100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/sysinfo.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/sysinfo.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/sysinfo.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/sysinfo.C.o -c /<>/source/SYSTEM/sysinfo.C [100%] Building CXX object CMakeFiles/BALL.dir/source/SYSTEM/timer.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/SYSTEM/timer.C.o -MF CMakeFiles/BALL.dir/source/SYSTEM/timer.C.o.d -o CMakeFiles/BALL.dir/source/SYSTEM/timer.C.o -c /<>/source/SYSTEM/timer.C [100%] Building CXX object CMakeFiles/BALL.dir/source/XRAY/crystalGenerator.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/XRAY/crystalGenerator.C.o -MF CMakeFiles/BALL.dir/source/XRAY/crystalGenerator.C.o.d -o CMakeFiles/BALL.dir/source/XRAY/crystalGenerator.C.o -c /<>/source/XRAY/crystalGenerator.C In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/atomContainer.h:9, from /<>/include/BALL/XRAY/crystalGenerator.h:8, from /<>/source/XRAY/crystalGenerator.C:1: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/composite.h:13, from /<>/include/BALL/KERNEL/atom.h:9, from /<>/include/BALL/KERNEL/atomIterator.h:11: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/source/XRAY/crystalGenerator.C: In member function ‘std::__cxx11::list BALL::CrystalGenerator::generateSymMoleculesWithinDistance(float)’: /<>/source/XRAY/crystalGenerator.C:269:76: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 269 | temp_mit = mit; | ^~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Molecule; Position = BALL::BidirectionalIterator; Traits = BALL::MoleculeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator, BALL::MoleculeIteratorTraits>& BALL::ConstBidirectionalIterator, BALL::MoleculeIteratorTraits>::operator=(const BALL::ConstBidirectionalIterator, BALL::MoleculeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator, BALL::MoleculeIteratorTraits>’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Molecule; Position = BALL::BidirectionalIterator; Traits = BALL::MoleculeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/source/XRAY/crystalGenerator.C: In member function ‘std::__cxx11::list BALL::CrystalGenerator::generateSymMoleculesWithinDistance(float)’: /<>/source/XRAY/crystalGenerator.C:269:76: note: synthesized method ‘BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>&)’ first required here 269 | temp_mit = mit; | ^~~ /<>/source/XRAY/crystalGenerator.C:272:71: warning: implicitly-declared ‘BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>& BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>::operator=(const BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>&)’ is deprecated [-Wdeprecated-copy] 272 | mit = temp_mit; | ^~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator, BALL::MoleculeIteratorTraits>’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Molecule; Position = BALL::BidirectionalIterator; Traits = BALL::MoleculeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ [100%] Building CXX object CMakeFiles/BALL.dir/source/XRAY/crystalInfo.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/XRAY/crystalInfo.C.o -MF CMakeFiles/BALL.dir/source/XRAY/crystalInfo.C.o.d -o CMakeFiles/BALL.dir/source/XRAY/crystalInfo.C.o -c /<>/source/XRAY/crystalInfo.C [100%] Building CXX object CMakeFiles/BALL.dir/source/XRAY/spaceGroupParameters.C.o /usr/bin/c++ -DBALL_EXPORTS -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_XML_LIB -I/<>/build/BALL_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/BALL.dir/source/XRAY/spaceGroupParameters.C.o -MF CMakeFiles/BALL.dir/source/XRAY/spaceGroupParameters.C.o.d -o CMakeFiles/BALL.dir/source/XRAY/spaceGroupParameters.C.o -c /<>/source/XRAY/spaceGroupParameters.C /<>/source/XRAY/spaceGroupParameters.C: In member function ‘virtual bool BALL::SpaceGroupParameters::extractSpaceGroup(BALL::Parameters&, const BALL::String&)’: /<>/source/XRAY/spaceGroupParameters.C:26:66: warning: unused parameter ‘parameters’ [-Wunused-parameter] 26 | bool SpaceGroupParameters::extractSpaceGroup(Parameters& parameters, const String& space_group) | ~~~~~~~~~~~~^~~~~~~~~~ /<>/source/XRAY/spaceGroupParameters.C:26:92: warning: unused parameter ‘space_group’ [-Wunused-parameter] 26 | bool SpaceGroupParameters::extractSpaceGroup(Parameters& parameters, const String& space_group) | ~~~~~~~~~~~~~~^~~~~~~~~~~ /<>/source/XRAY/spaceGroupParameters.C: In member function ‘virtual bool BALL::SpaceGroupParameters::extractSpaceGroup(BALL::Parameters&, BALL::Position)’: /<>/source/XRAY/spaceGroupParameters.C:31:66: warning: unused parameter ‘parameters’ [-Wunused-parameter] 31 | bool SpaceGroupParameters::extractSpaceGroup(Parameters& parameters, const Position iucr_no) | ~~~~~~~~~~~~^~~~~~~~~~ /<>/source/XRAY/spaceGroupParameters.C:31:93: warning: unused parameter ‘iucr_no’ [-Wunused-parameter] 31 | bool SpaceGroupParameters::extractSpaceGroup(Parameters& parameters, const Position iucr_no) | ~~~~~~~~~~~~~~~^~~~~~~ [100%] Linking CXX shared library lib/libBALL.so /usr/bin/cmake -E cmake_link_script CMakeFiles/BALL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG 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CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/genes.C.o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticAlgorithm.C.o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/geneticIndividual.C.o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/parameter.C.o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBond.C.o CMakeFiles/BALL.dir/source/DOCKING/GENETICDOCK/rotateBonds.C.o CMakeFiles/BALL.dir/source/DOCKING/IMGDOCK/IMGDock.C.o CMakeFiles/BALL.dir/source/SYSTEM/binaryFileAdaptor.C.o CMakeFiles/BALL.dir/source/SYSTEM/directory.C.o CMakeFiles/BALL.dir/source/SYSTEM/file.C.o CMakeFiles/BALL.dir/source/SYSTEM/fileSystem.C.o CMakeFiles/BALL.dir/source/SYSTEM/mutex.C.o CMakeFiles/BALL.dir/source/SYSTEM/networking.C.o CMakeFiles/BALL.dir/source/SYSTEM/path.C.o CMakeFiles/BALL.dir/source/SYSTEM/simpleDownloader.C.o CMakeFiles/BALL.dir/source/SYSTEM/sysinfo.C.o CMakeFiles/BALL.dir/source/SYSTEM/timer.C.o CMakeFiles/BALL.dir/source/XRAY/crystalGenerator.C.o CMakeFiles/BALL.dir/source/XRAY/crystalInfo.C.o CMakeFiles/BALL.dir/source/XRAY/spaceGroupParameters.C.o /usr/lib/arm-linux-gnueabihf/libboost_chrono.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_date_time.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_regex.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_system.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libboost_thread.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libQt5Network.so.5.15.13 /usr/lib/arm-linux-gnueabihf/libQt5Xml.so.5.15.13 -lpython3.12 -lpthread /usr/lib/arm-linux-gnueabihf/libboost_atomic.so.1.83.0 /usr/lib/arm-linux-gnueabihf/libQt5Core.so.5.15.13 /usr/bin/cmake -E cmake_symlink_library lib/libBALL.so.1.5 lib/libBALL.so.1.5 lib/libBALL.so message after library is built /usr/bin/cmake -E echo "" /usr/bin/cmake -E echo ========================================================================== ========================================================================== /usr/bin/cmake -E echo "" /usr/bin/cmake -E echo "The BALL library has been built." The BALL library has been built. /usr/bin/cmake -E echo "" /usr/bin/cmake -E echo "You should now build BALLView and the unit tests." You should now build BALLView and the unit tests. /usr/bin/cmake -E echo "Then you should test your installation by executing the tests." Then you should test your installation by executing the tests. /usr/bin/cmake -E echo "" /usr/bin/cmake -E echo "Make sure to add the BALL and contrib lib/ path" Make sure to add the BALL and contrib lib/ path /usr/bin/cmake -E echo "to your LD_LIBRARY_PATH environment variable." to your LD_LIBRARY_PATH environment variable. /usr/bin/cmake -E echo "Otherwise the tests and BALLView will not work." Otherwise the tests and BALLView will not work. /usr/bin/cmake -E echo "" /usr/bin/cmake -E echo "For a full list of targets execute:" For a full list of targets execute: /usr/bin/cmake -E echo "make targets" make targets /usr/bin/cmake -E echo "" /usr/bin/cmake -E echo ========================================================================== ========================================================================== /usr/bin/cmake -E echo "" make[5]: Leaving directory '/<>/build' [100%] Built target BALL make[4]: Leaving directory '/<>/build' /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles 0 make[3]: Leaving directory '/<>/build' make -f CMakeFiles/Makefile2 VIEW make[3]: Entering directory '/<>/build' /usr/bin/cmake -S/<> -B/<>/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/build/CMakeFiles 26 make -f CMakeFiles/Makefile2 CMakeFiles/VIEW.dir/all make[4]: Entering directory '/<>/build' make -f CMakeFiles/BALL_autogen_timestamp_deps.dir/build.make CMakeFiles/BALL_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/BALL_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/build' make -f CMakeFiles/BALL_autogen_timestamp_deps.dir/build.make CMakeFiles/BALL_autogen_timestamp_deps.dir/build make[5]: Entering directory '/<>/build' make[5]: Nothing to be done for 'CMakeFiles/BALL_autogen_timestamp_deps.dir/build'. make[5]: Leaving directory '/<>/build' [ 0%] Built target BALL_autogen_timestamp_deps make -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/BALL_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/build' make -f CMakeFiles/BALL_autogen.dir/build.make CMakeFiles/BALL_autogen.dir/build make[5]: Entering directory '/<>/build' make[5]: Nothing to be done for 'CMakeFiles/BALL_autogen.dir/build'. make[5]: Leaving directory '/<>/build' [ 0%] Built target BALL_autogen make -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/BALL.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/build' make -f CMakeFiles/BALL.dir/build.make CMakeFiles/BALL.dir/build make[5]: Entering directory '/<>/build' make[5]: Nothing to be done for 'CMakeFiles/BALL.dir/build'. make[5]: Leaving directory '/<>/build' [ 61%] Built target BALL make -f CMakeFiles/VIEW_autogen_timestamp_deps.dir/build.make CMakeFiles/VIEW_autogen_timestamp_deps.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/VIEW_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/build' make -f CMakeFiles/VIEW_autogen_timestamp_deps.dir/build.make CMakeFiles/VIEW_autogen_timestamp_deps.dir/build make[5]: Entering directory '/<>/build' [ 61%] Generating include/BALL/VIEW/UIC/ui_FDPBDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_FDPBDialog.h /<>/source/VIEW/DIALOGS/FDPBDialog.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_HTMLViewErrorWidget.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_HTMLViewErrorWidget.h /<>/source/VIEW/WIDGETS/HTMLViewErrorWidget.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_MMFF94ConfigurationDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_MMFF94ConfigurationDialog.h /<>/source/VIEW/DIALOGS/MMFF94ConfigurationDialog.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_PTEDialog.h /usr/lib/qt5/bin/uic -o 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/usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_bondProperties.h /<>/source/VIEW/DIALOGS/bondProperties.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_charmmConfigurationDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_charmmConfigurationDialog.h /<>/source/VIEW/DIALOGS/charmmConfigurationDialog.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_clippingDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_clippingDialog.h /<>/source/VIEW/DIALOGS/clippingDialog.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_coloringSettingsDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_coloringSettingsDialog.h /<>/source/VIEW/DIALOGS/coloringSettingsDialog.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_compositeProperties.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_compositeProperties.h /<>/source/VIEW/DIALOGS/compositeProperties.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_contourSurfaceDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_contourSurfaceDialog.h /<>/source/VIEW/DIALOGS/contourSurfaceDialog.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_displayProperties.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_displayProperties.h /<>/source/VIEW/DIALOGS/displayProperties.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_dockDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_dockDialog.h /<>/source/VIEW/DIALOGS/dockDialog.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_dockProgressDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_dockProgressDialog.h /<>/source/VIEW/DIALOGS/dockProgressDialog.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_dockResultDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_dockResultDialog.h /<>/source/VIEW/DIALOGS/dockResultDialog.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_downloadElectronDensity.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_downloadElectronDensity.h /<>/source/VIEW/DIALOGS/downloadElectronDensity.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_downloadPDBFile.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_downloadPDBFile.h /<>/source/VIEW/DIALOGS/downloadPDBFile.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_editSettings.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_editSettings.h /<>/source/VIEW/DIALOGS/editSettings.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_editSingleShortcut.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_editSingleShortcut.h /<>/source/VIEW/DIALOGS/editSingleShortcut.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_editorPDBInfoDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_editorPDBInfoDialog.h /<>/source/VIEW/DIALOGS/editorPDBInfoDialog.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_exportGeometryDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_exportGeometryDialog.h /<>/source/VIEW/DIALOGS/exportGeometryDialog.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_fieldLinesDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_fieldLinesDialog.h /<>/source/VIEW/DIALOGS/fieldLinesDialog.ui [ 61%] Generating include/BALL/VIEW/UIC/ui_generateCrystalDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_generateCrystalDialog.h /<>/source/VIEW/DIALOGS/generateCrystalDialog.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_gridColorWidget.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_gridColorWidget.h /<>/source/VIEW/DIALOGS/gridColorWidget.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_gridVisualizationDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_gridVisualizationDialog.h /<>/source/VIEW/DIALOGS/gridVisualizationDialog.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_labelDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_labelDialog.h /<>/source/VIEW/DIALOGS/labelDialog.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_lightSettings.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_lightSettings.h /<>/source/VIEW/DIALOGS/lightSettings.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_mainControlPreferences.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_mainControlPreferences.h /<>/source/VIEW/DIALOGS/mainControlPreferences.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_materialSettings.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_materialSettings.h /<>/source/VIEW/DIALOGS/materialSettings.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_minimizationDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_minimizationDialog.h /<>/source/VIEW/DIALOGS/minimizationDialog.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_modelSettingsDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_modelSettingsDialog.h /<>/source/VIEW/DIALOGS/modelSettingsDialog.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_modifyRepresentationDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_modifyRepresentationDialog.h /<>/source/VIEW/DIALOGS/modifyRepresentationDialog.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_molecularDynamicsDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_molecularDynamicsDialog.h /<>/source/VIEW/DIALOGS/molecularDynamicsDialog.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_networkPreferences.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_networkPreferences.h /<>/source/VIEW/DIALOGS/networkPreferences.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_openSavePreferences.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_openSavePreferences.h /<>/source/VIEW/DIALOGS/openSavePreferences.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_parsedFunctionDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_parsedFunctionDialog.h /<>/source/VIEW/DIALOGS/parsedFunctionDialog.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_peptideDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_peptideDialog.h /<>/source/VIEW/DIALOGS/peptideDialog.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_pluginDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_pluginDialog.h /<>/source/VIEW/DIALOGS/pluginDialog.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_preferences.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_preferences.h /<>/source/VIEW/DIALOGS/preferences.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_propEditorWidget.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_propEditorWidget.h /<>/source/VIEW/DIALOGS/propEditorWidget.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_propertyEditor.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_propertyEditor.h /<>/source/VIEW/DIALOGS/propertyEditor.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_pubchemDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_pubchemDialog.h /<>/source/VIEW/DIALOGS/pubchemDialog.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_raytraceableContourSurfaceDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_raytraceableContourSurfaceDialog.h /<>/source/VIEW/DIALOGS/raytraceableContourSurfaceDialog.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_setCamera.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_setCamera.h /<>/source/VIEW/DIALOGS/setCamera.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_setClippingPlane.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_setClippingPlane.h /<>/source/VIEW/DIALOGS/setClippingPlane.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_shortcutDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_shortcutDialog.h /<>/source/VIEW/DIALOGS/shortcutDialog.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_snapShotVisualisation.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_snapShotVisualisation.h /<>/source/VIEW/DIALOGS/snapShotVisualisation.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_stageSettings.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_stageSettings.h /<>/source/VIEW/DIALOGS/stageSettings.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_stereoSettingsDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_stereoSettingsDialog.h /<>/source/VIEW/DIALOGS/stereoSettingsDialog.ui [ 65%] Generating include/BALL/VIEW/UIC/ui_undoManagerDialog.h /usr/lib/qt5/bin/uic -o /<>/build/include/BALL/VIEW/UIC/ui_undoManagerDialog.h /<>/source/VIEW/DIALOGS/undoManagerDialog.ui make[5]: Leaving directory '/<>/build' [ 65%] Built target VIEW_autogen_timestamp_deps make -f CMakeFiles/VIEW_autogen.dir/build.make CMakeFiles/VIEW_autogen.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/VIEW_autogen.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/build' make -f CMakeFiles/VIEW_autogen.dir/build.make CMakeFiles/VIEW_autogen.dir/build make[5]: Entering directory '/<>/build' [ 69%] Automatic MOC for target VIEW /usr/bin/cmake -E cmake_autogen /<>/build/CMakeFiles/VIEW_autogen.dir/AutogenInfo.json Release /usr/bin/cmake -E touch /<>/build/VIEW_autogen/timestamp make[5]: Leaving directory '/<>/build' [ 69%] Built target VIEW_autogen make -f CMakeFiles/VIEW.dir/build.make CMakeFiles/VIEW.dir/depend make[5]: Entering directory '/<>/build' cd /<>/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/build /<>/build /<>/build/CMakeFiles/VIEW.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/build' make -f CMakeFiles/VIEW.dir/build.make CMakeFiles/VIEW.dir/build make[5]: Entering directory '/<>/build' [ 69%] Building CXX object CMakeFiles/VIEW.dir/VIEW_autogen/mocs_compilation.cpp.o /usr/bin/c++ -DBOOST_ATOMIC_DYN_LINK -DBOOST_ATOMIC_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THREAD_NO_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_OPENGL_LIB -DQT_POSITIONING_LIB -DQT_PRINTSUPPORT_LIB -DQT_QMLMODELS_LIB -DQT_QML_LIB -DQT_QUICK_LIB -DQT_TESTCASE_BUILDDIR=\"/<>/build\" -DQT_TESTLIB_LIB -DQT_WEBCHANNEL_LIB -DQT_WEBENGINECORE_LIB -DQT_WEBENGINEWIDGETS_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -DVIEW_EXPORTS -I/<>/build/VIEW_autogen/include -I/<>/include -I/<>/build/include -I/usr/include/eigen3 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -isystem /usr/include/arm-linux-gnueabihf/qt5/QtOpenGL -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtPrintSupport -isystem /usr/include/arm-linux-gnueabihf/qt5/QtTest -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWebEngineWidgets -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWebEngineCore -isystem /usr/include/arm-linux-gnueabihf/qt5/QtQuick -isystem /usr/include/arm-linux-gnueabihf/qt5/QtQmlModels -isystem /usr/include/arm-linux-gnueabihf/qt5/QtQml -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWebChannel -isystem /usr/include/arm-linux-gnueabihf/qt5/QtPositioning -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fno-stack-clash-protection -fdebug-prefix-map=/<>=/usr/src/ball-1.5.0+git20180813.37fc53c-11build5 -I/usr/include/tirpc -Wall -Wextra -Wno-deprecated-declarations -std=c++0x -pedantic -O3 -DNDEBUG -fPIC -fPIC -MD -MT CMakeFiles/VIEW.dir/VIEW_autogen/mocs_compilation.cpp.o -MF CMakeFiles/VIEW.dir/VIEW_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/VIEW.dir/VIEW_autogen/mocs_compilation.cpp.o -c /<>/build/VIEW_autogen/mocs_compilation.cpp In file included from /<>/include/BALL/KERNEL/atomIterator.h:15, from /<>/include/BALL/KERNEL/system.h:9, from /<>/include/BALL/SOLVATION/poissonBoltzmann.h:21, from /<>/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/FDPBDialog.h:20, from /<>/build/VIEW_autogen/OR3C44JOXY/moc_FDPBDialog.cpp:10, from /<>/build/VIEW_autogen/mocs_compilation.cpp:4: /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/CONCEPT/object.h:17, from /<>/include/BALL/CONCEPT/persistentObject.h:9, from /<>/include/BALL/CONCEPT/persistenceManager.h:25, from /<>/include/BALL/MATHS/vector2.h:9, from /<>/include/BALL/DATATYPE/regularData2D.h:9, from /<>/build/VIEW_autogen/2AM2ODBFSX/../../../include/BALL/VIEW/DATATYPE/standardDatasets.h:17, from /<>/build/VIEW_autogen/2AM2ODBFSX/moc_standardDatasets.cpp:10, from /<>/build/VIEW_autogen/mocs_compilation.cpp:3: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h: In member function ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’: /<>/include/BALL/CONCEPT/bidirectionalIterator.h:258:15: warning: implicitly-declared ‘BALL::ConstBidirectionalIterator& BALL::ConstBidirectionalIterator::operator=(const BALL::ConstBidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 258 | class BidirectionalIterator | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:46:29: note: because ‘BALL::ConstBidirectionalIterator’ has user-provided ‘BALL::ConstBidirectionalIterator::ConstBidirectionalIterator(const BALL::ConstBidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 46 | BALL_INLINE ConstBidirectionalIterator(const ConstBidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘BALL::CompositeIteratorTraits& BALL::CompositeIteratorTraits::operator=(const BALL::CompositeIteratorTraits&)’: /<>/include/BALL/KERNEL/iterator.h:262:46: note: synthesized method ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ first required here 262 | composite_iterator_ = traits.composite_iterator_; | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toBegin()’: /<>/include/BALL/KERNEL/iterator.h:286:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 286 | composite_iterator_ = bound_->beginComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/KERNEL/iterator.h: In member function ‘void BALL::CompositeIteratorTraits::toRBegin()’: /<>/include/BALL/KERNEL/iterator.h:343:62: warning: implicitly-declared ‘BALL::BidirectionalIterator& BALL::BidirectionalIterator::operator=(const BALL::BidirectionalIterator&)’ is deprecated [-Wdeprecated-copy] 343 | composite_iterator_ = --bound_->endComposite(); | ^ /<>/include/BALL/CONCEPT/bidirectionalIterator.h:283:29: note: because ‘BALL::BidirectionalIterator’ has user-provided ‘BALL::BidirectionalIterator::BidirectionalIterator(const BALL::BidirectionalIterator&) [with Container = BALL::Composite; DataType = BALL::Composite; Position = BALL::Composite*; Traits = BALL::Composite::CompositeIteratorTraits]’ 283 | BALL_INLINE BidirectionalIterator(const BidirectionalIterator& iterator) | ^~~~~~~~~~~~~~~~~~~~~ In file included from /<>/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/labelDialog.h:21, from /<>/build/VIEW_autogen/OR3C44JOXY/moc_labelDialog.cpp:10, from /<>/build/VIEW_autogen/mocs_compilation.cpp:29: /<>/include/BALL/VIEW/KERNEL/message.h: In member function ‘void BALL::VIEW::SceneMessage::setStage(BALL::VIEW::Stage)’: /<>/include/BALL/VIEW/KERNEL/message.h:409:29: warning: implicitly-declared ‘BALL::VIEW::Stage& BALL::VIEW::Stage::operator=(const BALL::VIEW::Stage&)’ is deprecated [-Wdeprecated-copy] 409 | { stage_ = stage;} | ^~~~~ In file included from /<>/include/BALL/VIEW/KERNEL/message.h:9: /<>/include/BALL/VIEW/KERNEL/stage.h:301:25: note: because ‘BALL::VIEW::Stage’ has user-provided ‘BALL::VIEW::Stage::Stage(const BALL::VIEW::Stage&)’ 301 | Stage(const Stage& stage); | ^~~~~ In file included from /usr/include/arm-linux-gnueabihf/qt5/QtGui/qopengl.h:105, from /usr/include/arm-linux-gnueabihf/qt5/QtOpenGL/qgl.h:45, from /<>/include/BALL/VIEW/RENDERING/glDisplayList.h:13, from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:39, from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:9, from /<>/build/VIEW_autogen/OR3C44JOXY/../../../include/BALL/VIEW/DIALOGS/stageSettings.h:21, from /<>/build/VIEW_autogen/OR3C44JOXY/moc_stageSettings.cpp:10, from /<>/build/VIEW_autogen/mocs_compilation.cpp:51: /usr/include/GLES3/gl32.h: At global scope: /usr/include/GLES3/gl32.h:56:25: error: conflicting declaration ‘typedef khronos_ssize_t GLsizeiptr’ 56 | typedef khronos_ssize_t GLsizeiptr; | ^~~~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/RENDERERS/glRenderer.h:29: /usr/include/GL/glew.h:1694:19: note: previous declaration as ‘typedef ptrdiff_t GLsizeiptr’ 1694 | typedef ptrdiff_t GLsizeiptr; | ^~~~~~~~~~ /usr/include/GLES3/gl32.h:57:26: error: conflicting declaration ‘typedef khronos_intptr_t GLintptr’ 57 | typedef khronos_intptr_t GLintptr; | ^~~~~~~~ /usr/include/GL/glew.h:1693:19: note: previous declaration as ‘typedef ptrdiff_t GLintptr’ 1693 | typedef ptrdiff_t GLintptr; | ^~~~~~~~ /usr/include/GLES3/gl32.h:507:60: error: ‘void __glewActiveTexture(GLenum)’ redeclared as different kind of entity 507 | GL_APICALL void GL_APIENTRY glActiveTexture (GLenum texture); | ^ /usr/include/GL/glew.h:22286:40: note: previous declaration ‘void (* __glewActiveTexture)(GLenum)’ 22286 | GLEW_FUN_EXPORT PFNGLACTIVETEXTUREPROC __glewActiveTexture; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:508:74: error: ‘void __glewAttachShader(GLuint, GLuint)’ redeclared as different kind of entity 508 | GL_APICALL void GL_APIENTRY glAttachShader (GLuint program, GLuint shader); | ^ /usr/include/GL/glew.h:22401:39: note: previous declaration ‘void (* __glewAttachShader)(GLuint, GLuint)’ 22401 | GLEW_FUN_EXPORT PFNGLATTACHSHADERPROC __glewAttachShader; | ^~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:509:99: error: ‘void __glewBindAttribLocation(GLuint, GLuint, const GLchar*)’ redeclared as different kind of entity 509 | GL_APICALL void GL_APIENTRY glBindAttribLocation (GLuint program, GLuint index, const GLchar *name); | ^ /usr/include/GL/glew.h:22402:45: note: previous declaration ‘void (* __glewBindAttribLocation)(GLuint, GLuint, const GLchar*)’ 22402 | GLEW_FUN_EXPORT PFNGLBINDATTRIBLOCATIONPROC __glewBindAttribLocation; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:510:71: error: ‘void __glewBindBuffer(GLenum, GLuint)’ redeclared as different kind of entity 510 | GL_APICALL void GL_APIENTRY glBindBuffer (GLenum target, GLuint buffer); | ^ /usr/include/GL/glew.h:22382:37: note: previous declaration ‘void (* __glewBindBuffer)(GLenum, GLuint)’ 22382 | GLEW_FUN_EXPORT PFNGLBINDBUFFERPROC __glewBindBuffer; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:511:81: error: ‘void __glewBindFramebuffer(GLenum, GLuint)’ redeclared as different kind of entity 511 | GL_APICALL void GL_APIENTRY glBindFramebuffer (GLenum target, GLuint framebuffer); | ^ /usr/include/GL/glew.h:22896:42: note: previous declaration ‘void (* __glewBindFramebuffer)(GLenum, GLuint)’ 22896 | GLEW_FUN_EXPORT PFNGLBINDFRAMEBUFFERPROC __glewBindFramebuffer; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:512:83: error: ‘void __glewBindRenderbuffer(GLenum, GLuint)’ redeclared as different kind of entity 512 | GL_APICALL void GL_APIENTRY glBindRenderbuffer (GLenum target, GLuint renderbuffer); | ^ /usr/include/GL/glew.h:22897:43: note: previous declaration ‘void (* __glewBindRenderbuffer)(GLenum, GLuint)’ 22897 | GLEW_FUN_EXPORT PFNGLBINDRENDERBUFFERPROC __glewBindRenderbuffer; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:514:98: error: ‘void __glewBlendColor(GLfloat, GLfloat, GLfloat, GLfloat)’ redeclared as different kind of entity 514 | GL_APICALL void GL_APIENTRY glBlendColor (GLfloat red, GLfloat green, GLfloat blue, GLfloat alpha); | ^ /usr/include/GL/glew.h:22333:37: note: previous declaration ‘void (* __glewBlendColor)(GLclampf, GLclampf, GLclampf, GLclampf)’ 22333 | GLEW_FUN_EXPORT PFNGLBLENDCOLORPROC __glewBlendColor; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:515:57: error: ‘void __glewBlendEquation(GLenum)’ redeclared as different kind of entity 515 | GL_APICALL void GL_APIENTRY glBlendEquation (GLenum mode); | ^ /usr/include/GL/glew.h:22334:40: note: previous declaration ‘void (* __glewBlendEquation)(GLenum)’ 22334 | GLEW_FUN_EXPORT PFNGLBLENDEQUATIONPROC __glewBlendEquation; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:516:86: error: ‘void __glewBlendEquationSeparate(GLenum, GLenum)’ redeclared as different kind of entity 516 | GL_APICALL void GL_APIENTRY glBlendEquationSeparate (GLenum modeRGB, GLenum modeAlpha); | ^ /usr/include/GL/glew.h:22403:48: note: previous declaration ‘void (* __glewBlendEquationSeparate)(GLenum, GLenum)’ 22403 | GLEW_FUN_EXPORT PFNGLBLENDEQUATIONSEPARATEPROC __glewBlendEquationSeparate; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:518:128: error: ‘void __glewBlendFuncSeparate(GLenum, GLenum, GLenum, GLenum)’ redeclared as different kind of entity 518 | GL_APICALL void GL_APIENTRY glBlendFuncSeparate (GLenum sfactorRGB, GLenum dfactorRGB, GLenum sfactorAlpha, GLenum dfactorAlpha); | ^ /usr/include/GL/glew.h:22335:44: note: previous declaration ‘void (* __glewBlendFuncSeparate)(GLenum, GLenum, GLenum, GLenum)’ 22335 | GLEW_FUN_EXPORT PFNGLBLENDFUNCSEPARATEPROC __glewBlendFuncSeparate; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:519:105: error: ‘void __glewBufferData(GLenum, GLsizeiptr, const void*, GLenum)’ redeclared as different kind of entity 519 | GL_APICALL void GL_APIENTRY glBufferData (GLenum target, GLsizeiptr size, const void *data, GLenum usage); | ^ /usr/include/GL/glew.h:22383:37: note: previous declaration ‘void (* __glewBufferData)(GLenum, GLsizeiptr, const void*, GLenum)’ 22383 | GLEW_FUN_EXPORT PFNGLBUFFERDATAPROC __glewBufferData; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:520:111: error: ‘void __glewBufferSubData(GLenum, GLintptr, GLsizeiptr, const void*)’ redeclared as different kind of entity 520 | GL_APICALL void GL_APIENTRY glBufferSubData (GLenum target, GLintptr offset, GLsizeiptr size, const void *data); | ^ /usr/include/GL/glew.h:22384:40: note: previous declaration ‘void (* __glewBufferSubData)(GLenum, GLintptr, GLsizeiptr, const void*)’ 22384 | GLEW_FUN_EXPORT PFNGLBUFFERSUBDATAPROC __glewBufferSubData; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:521:70: error: ‘GLenum __glewCheckFramebufferStatus(GLenum)’ redeclared as different kind of entity 521 | GL_APICALL GLenum GL_APIENTRY glCheckFramebufferStatus (GLenum target); | ^ /usr/include/GL/glew.h:22899:49: note: previous declaration ‘GLenum (* __glewCheckFramebufferStatus)(GLenum)’ 22899 | GLEW_FUN_EXPORT PFNGLCHECKFRAMEBUFFERSTATUSPROC __glewCheckFramebufferStatus; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:524:53: error: ‘void __glewClearDepthf(GLfloat)’ redeclared as different kind of entity 524 | GL_APICALL void GL_APIENTRY glClearDepthf (GLfloat d); | ^ /usr/include/GL/glew.h:22714:38: note: previous declaration ‘void (* __glewClearDepthf)(GLclampf)’ 22714 | GLEW_FUN_EXPORT PFNGLCLEARDEPTHFPROC __glewClearDepthf; | ^~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:527:59: error: ‘void __glewCompileShader(GLuint)’ redeclared as different kind of entity 527 | GL_APICALL void GL_APIENTRY glCompileShader (GLuint shader); | ^ /usr/include/GL/glew.h:22404:40: note: previous declaration ‘void (* __glewCompileShader)(GLuint)’ 22404 | GLEW_FUN_EXPORT PFNGLCOMPILESHADERPROC __glewCompileShader; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:528:184: error: ‘void __glewCompressedTexImage2D(GLenum, GLint, GLenum, GLsizei, GLsizei, GLint, GLsizei, const void*)’ redeclared as different kind of entity 528 | GL_APICALL void GL_APIENTRY glCompressedTexImage2D (GLenum target, GLint level, GLenum internalformat, GLsizei width, GLsizei height, GLint border, GLsizei imageSize, const void *data); | ^ /usr/include/GL/glew.h:22289:47: note: previous declaration ‘void (* __glewCompressedTexImage2D)(GLenum, GLint, GLenum, GLsizei, GLsizei, GLint, GLsizei, const void*)’ 22289 | GLEW_FUN_EXPORT PFNGLCOMPRESSEDTEXIMAGE2DPROC __glewCompressedTexImage2D; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:529:195: error: ‘void __glewCompressedTexSubImage2D(GLenum, GLint, GLint, GLint, GLsizei, GLsizei, GLenum, GLsizei, const void*)’ redeclared as different kind of entity 529 | GL_APICALL void GL_APIENTRY glCompressedTexSubImage2D (GLenum target, GLint level, GLint xoffset, GLint yoffset, GLsizei width, GLsizei height, GLenum format, GLsizei imageSize, const void *data); | ^ /usr/include/GL/glew.h:22292:50: note: previous declaration ‘void (* __glewCompressedTexSubImage2D)(GLenum, GLint, GLint, GLint, GLsizei, GLsizei, GLenum, GLsizei, const void*)’ 22292 | GLEW_FUN_EXPORT PFNGLCOMPRESSEDTEXSUBIMAGE2DPROC __glewCompressedTexSubImage2D; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:532:52: error: ‘GLuint __glewCreateProgram()’ redeclared as different kind of entity 532 | GL_APICALL GLuint GL_APIENTRY glCreateProgram (void); | ^ /usr/include/GL/glew.h:22405:40: note: previous declaration ‘GLuint (* __glewCreateProgram)()’ 22405 | GLEW_FUN_EXPORT PFNGLCREATEPROGRAMPROC __glewCreateProgram; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:533:58: error: ‘GLuint __glewCreateShader(GLenum)’ redeclared as different kind of entity 533 | GL_APICALL GLuint GL_APIENTRY glCreateShader (GLenum type); | ^ /usr/include/GL/glew.h:22406:39: note: previous declaration ‘GLuint (* __glewCreateShader)(GLenum)’ 22406 | GLEW_FUN_EXPORT PFNGLCREATESHADERPROC __glewCreateShader; | ^~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:535:78: error: ‘void __glewDeleteBuffers(GLsizei, const GLuint*)’ redeclared as different kind of entity 535 | GL_APICALL void GL_APIENTRY glDeleteBuffers (GLsizei n, const GLuint *buffers); | ^ /usr/include/GL/glew.h:22385:40: note: previous declaration ‘void (* __glewDeleteBuffers)(GLsizei, const GLuint*)’ 22385 | GLEW_FUN_EXPORT PFNGLDELETEBUFFERSPROC __glewDeleteBuffers; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:536:88: error: ‘void __glewDeleteFramebuffers(GLsizei, const GLuint*)’ redeclared as different kind of entity 536 | GL_APICALL void GL_APIENTRY glDeleteFramebuffers (GLsizei n, const GLuint *framebuffers); | ^ /usr/include/GL/glew.h:22900:45: note: previous declaration ‘void (* __glewDeleteFramebuffers)(GLsizei, const GLuint*)’ 22900 | GLEW_FUN_EXPORT PFNGLDELETEFRAMEBUFFERSPROC __glewDeleteFramebuffers; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:537:60: error: ‘void __glewDeleteProgram(GLuint)’ redeclared as different kind of entity 537 | GL_APICALL void GL_APIENTRY glDeleteProgram (GLuint program); | ^ /usr/include/GL/glew.h:22407:40: note: previous declaration ‘void (* __glewDeleteProgram)(GLuint)’ 22407 | GLEW_FUN_EXPORT PFNGLDELETEPROGRAMPROC __glewDeleteProgram; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:538:90: error: ‘void __glewDeleteRenderbuffers(GLsizei, const GLuint*)’ redeclared as different kind of entity 538 | GL_APICALL void GL_APIENTRY glDeleteRenderbuffers (GLsizei n, const GLuint *renderbuffers); | ^ /usr/include/GL/glew.h:22901:46: note: previous declaration ‘void (* __glewDeleteRenderbuffers)(GLsizei, const GLuint*)’ 22901 | GLEW_FUN_EXPORT PFNGLDELETERENDERBUFFERSPROC __glewDeleteRenderbuffers; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:539:58: error: ‘void __glewDeleteShader(GLuint)’ redeclared as different kind of entity 539 | GL_APICALL void GL_APIENTRY glDeleteShader (GLuint shader); | ^ /usr/include/GL/glew.h:22408:39: note: previous declaration ‘void (* __glewDeleteShader)(GLuint)’ 22408 | GLEW_FUN_EXPORT PFNGLDELETESHADERPROC __glewDeleteShader; | ^~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:543:64: error: ‘void __glewDepthRangef(GLfloat, GLfloat)’ redeclared as different kind of entity 543 | GL_APICALL void GL_APIENTRY glDepthRangef (GLfloat n, GLfloat f); | ^ /usr/include/GL/glew.h:22715:38: note: previous declaration ‘void (* __glewDepthRangef)(GLclampf, GLclampf)’ 22715 | GLEW_FUN_EXPORT PFNGLDEPTHRANGEFPROC __glewDepthRangef; | ^~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:544:74: error: ‘void __glewDetachShader(GLuint, GLuint)’ redeclared as different kind of entity 544 | GL_APICALL void GL_APIENTRY glDetachShader (GLuint program, GLuint shader); | ^ /usr/include/GL/glew.h:22409:39: note: previous declaration ‘void (* __glewDetachShader)(GLuint, GLuint)’ 22409 | GLEW_FUN_EXPORT PFNGLDETACHSHADERPROC __glewDetachShader; | ^~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:546:69: error: ‘void __glewDisableVertexAttribArray(GLuint)’ redeclared as different kind of entity 546 | GL_APICALL void GL_APIENTRY glDisableVertexAttribArray (GLuint index); | ^ /usr/include/GL/glew.h:22410:51: note: previous declaration ‘void (* __glewDisableVertexAttribArray)(GLuint)’ 22410 | GLEW_FUN_EXPORT PFNGLDISABLEVERTEXATTRIBARRAYPROC __glewDisableVertexAttribArray; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:550:68: error: ‘void __glewEnableVertexAttribArray(GLuint)’ redeclared as different kind of entity 550 | GL_APICALL void GL_APIENTRY glEnableVertexAttribArray (GLuint index); | ^ /usr/include/GL/glew.h:22412:50: note: previous declaration ‘void (* __glewEnableVertexAttribArray)(GLuint)’ 22412 | GLEW_FUN_EXPORT PFNGLENABLEVERTEXATTRIBARRAYPROC __glewEnableVertexAttribArray; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:553:136: error: ‘void __glewFramebufferRenderbuffer(GLenum, GLenum, GLenum, GLuint)’ redeclared as different kind of entity 553 | GL_APICALL void GL_APIENTRY glFramebufferRenderbuffer (GLenum target, GLenum attachment, GLenum renderbuffertarget, GLuint renderbuffer); | ^ /usr/include/GL/glew.h:22902:50: note: previous declaration ‘void (* __glewFramebufferRenderbuffer)(GLenum, GLenum, GLenum, GLuint)’ 22902 | GLEW_FUN_EXPORT PFNGLFRAMEBUFFERRENDERBUFFERPROC __glewFramebufferRenderbuffer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:554:132: error: ‘void __glewFramebufferTexture2D(GLenum, GLenum, GLenum, GLuint, GLint)’ redeclared as different kind of entity 554 | GL_APICALL void GL_APIENTRY glFramebufferTexture2D (GLenum target, GLenum attachment, GLenum textarget, GLuint texture, GLint level); | ^ /usr/include/GL/glew.h:22904:47: note: previous declaration ‘void (* __glewFramebufferTexture2D)(GLenum, GLenum, GLenum, GLuint, GLint)’ 22904 | GLEW_FUN_EXPORT PFNGLFRAMEBUFFERTEXTURE2DPROC __glewFramebufferTexture2D; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:556:69: error: ‘void __glewGenBuffers(GLsizei, GLuint*)’ redeclared as different kind of entity 556 | GL_APICALL void GL_APIENTRY glGenBuffers (GLsizei n, GLuint *buffers); | ^ /usr/include/GL/glew.h:22388:37: note: previous declaration ‘void (* __glewGenBuffers)(GLsizei, GLuint*)’ 22388 | GLEW_FUN_EXPORT PFNGLGENBUFFERSPROC __glewGenBuffers; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:557:60: error: ‘void __glewGenerateMipmap(GLenum)’ redeclared as different kind of entity 557 | GL_APICALL void GL_APIENTRY glGenerateMipmap (GLenum target); | ^ /usr/include/GL/glew.h:22909:41: note: previous declaration ‘void (* __glewGenerateMipmap)(GLenum)’ 22909 | GLEW_FUN_EXPORT PFNGLGENERATEMIPMAPPROC __glewGenerateMipmap; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:558:79: error: ‘void __glewGenFramebuffers(GLsizei, GLuint*)’ redeclared as different kind of entity 558 | GL_APICALL void GL_APIENTRY glGenFramebuffers (GLsizei n, GLuint *framebuffers); | ^ /usr/include/GL/glew.h:22907:42: note: previous declaration ‘void (* __glewGenFramebuffers)(GLsizei, GLuint*)’ 22907 | GLEW_FUN_EXPORT PFNGLGENFRAMEBUFFERSPROC __glewGenFramebuffers; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:559:81: error: ‘void __glewGenRenderbuffers(GLsizei, GLuint*)’ redeclared as different kind of entity 559 | GL_APICALL void GL_APIENTRY glGenRenderbuffers (GLsizei n, GLuint *renderbuffers); | ^ /usr/include/GL/glew.h:22908:43: note: previous declaration ‘void (* __glewGenRenderbuffers)(GLsizei, GLuint*)’ 22908 | GLEW_FUN_EXPORT PFNGLGENRENDERBUFFERSPROC __glewGenRenderbuffers; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:561:151: error: ‘void __glewGetActiveAttrib(GLuint, GLuint, GLsizei, GLsizei*, GLint*, GLenum*, GLchar*)’ redeclared as different kind of entity 561 | GL_APICALL void GL_APIENTRY glGetActiveAttrib (GLuint program, GLuint index, GLsizei bufSize, GLsizei *length, GLint *size, GLenum *type, GLchar *name); | ^ /usr/include/GL/glew.h:22413:42: note: previous declaration ‘void (* __glewGetActiveAttrib)(GLuint, GLuint, GLsizei, GLsizei*, GLint*, GLenum*, GLchar*)’ 22413 | GLEW_FUN_EXPORT PFNGLGETACTIVEATTRIBPROC __glewGetActiveAttrib; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:562:152: error: ‘void __glewGetActiveUniform(GLuint, GLuint, GLsizei, GLsizei*, GLint*, GLenum*, GLchar*)’ redeclared as different kind of entity 562 | GL_APICALL void GL_APIENTRY glGetActiveUniform (GLuint program, GLuint index, GLsizei bufSize, GLsizei *length, GLint *size, GLenum *type, GLchar *name); | ^ /usr/include/GL/glew.h:22414:43: note: previous declaration ‘void (* __glewGetActiveUniform)(GLuint, GLuint, GLsizei, GLsizei*, GLint*, GLenum*, GLchar*)’ 22414 | GLEW_FUN_EXPORT PFNGLGETACTIVEUNIFORMPROC __glewGetActiveUniform; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:563:116: error: ‘void __glewGetAttachedShaders(GLuint, GLsizei, GLsizei*, GLuint*)’ redeclared as different kind of entity 563 | GL_APICALL void GL_APIENTRY glGetAttachedShaders (GLuint program, GLsizei maxCount, GLsizei *count, GLuint *shaders); | ^ /usr/include/GL/glew.h:22415:45: note: previous declaration ‘void (* __glewGetAttachedShaders)(GLuint, GLsizei, GLsizei*, GLuint*)’ 22415 | GLEW_FUN_EXPORT PFNGLGETATTACHEDSHADERSPROC __glewGetAttachedShaders; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:564:85: error: ‘GLint __glewGetAttribLocation(GLuint, const GLchar*)’ redeclared as different kind of entity 564 | GL_APICALL GLint GL_APIENTRY glGetAttribLocation (GLuint program, const GLchar *name); | ^ /usr/include/GL/glew.h:22416:44: note: previous declaration ‘GLint (* __glewGetAttribLocation)(GLuint, const GLchar*)’ 22416 | GLEW_FUN_EXPORT PFNGLGETATTRIBLOCATIONPROC __glewGetAttribLocation; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:566:95: error: ‘void __glewGetBufferParameteriv(GLenum, GLenum, GLint*)’ redeclared as different kind of entity 566 | GL_APICALL void GL_APIENTRY glGetBufferParameteriv (GLenum target, GLenum pname, GLint *params); | ^ /usr/include/GL/glew.h:22390:47: note: previous declaration ‘void (* __glewGetBufferParameteriv)(GLenum, GLenum, GLint*)’ 22390 | GLEW_FUN_EXPORT PFNGLGETBUFFERPARAMETERIVPROC __glewGetBufferParameteriv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:569:129: error: ‘void __glewGetFramebufferAttachmentParameteriv(GLenum, GLenum, GLenum, GLint*)’ redeclared as different kind of entity 569 | GL_APICALL void GL_APIENTRY glGetFramebufferAttachmentParameteriv (GLenum target, GLenum attachment, GLenum pname, GLint *params); | ^ /usr/include/GL/glew.h:22910:62: note: previous declaration ‘void (* __glewGetFramebufferAttachmentParameteriv)(GLenum, GLenum, GLenum, GLint*)’ 22910 | GLEW_FUN_EXPORT PFNGLGETFRAMEBUFFERATTACHMENTPARAMETERIVPROC __glewGetFramebufferAttachmentParameteriv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:571:88: error: ‘void __glewGetProgramiv(GLuint, GLenum, GLint*)’ redeclared as different kind of entity 571 | GL_APICALL void GL_APIENTRY glGetProgramiv (GLuint program, GLenum pname, GLint *params); | ^ /usr/include/GL/glew.h:22418:39: note: previous declaration ‘void (* __glewGetProgramiv)(GLuint, GLenum, GLint*)’ 22418 | GLEW_FUN_EXPORT PFNGLGETPROGRAMIVPROC __glewGetProgramiv; | ^~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:572:115: error: ‘void __glewGetProgramInfoLog(GLuint, GLsizei, GLsizei*, GLchar*)’ redeclared as different kind of entity 572 | GL_APICALL void GL_APIENTRY glGetProgramInfoLog (GLuint program, GLsizei bufSize, GLsizei *length, GLchar *infoLog); | ^ /usr/include/GL/glew.h:22417:44: note: previous declaration ‘void (* __glewGetProgramInfoLog)(GLuint, GLsizei, GLsizei*, GLchar*)’ 22417 | GLEW_FUN_EXPORT PFNGLGETPROGRAMINFOLOGPROC __glewGetProgramInfoLog; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:573:101: error: ‘void __glewGetRenderbufferParameteriv(GLenum, GLenum, GLint*)’ redeclared as different kind of entity 573 | GL_APICALL void GL_APIENTRY glGetRenderbufferParameteriv (GLenum target, GLenum pname, GLint *params); | ^ /usr/include/GL/glew.h:22911:53: note: previous declaration ‘void (* __glewGetRenderbufferParameteriv)(GLenum, GLenum, GLint*)’ 22911 | GLEW_FUN_EXPORT PFNGLGETRENDERBUFFERPARAMETERIVPROC __glewGetRenderbufferParameteriv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:574:86: error: ‘void __glewGetShaderiv(GLuint, GLenum, GLint*)’ redeclared as different kind of entity 574 | GL_APICALL void GL_APIENTRY glGetShaderiv (GLuint shader, GLenum pname, GLint *params); | ^ /usr/include/GL/glew.h:22421:38: note: previous declaration ‘void (* __glewGetShaderiv)(GLuint, GLenum, GLint*)’ 22421 | GLEW_FUN_EXPORT PFNGLGETSHADERIVPROC __glewGetShaderiv; | ^~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:575:113: error: ‘void __glewGetShaderInfoLog(GLuint, GLsizei, GLsizei*, GLchar*)’ redeclared as different kind of entity 575 | GL_APICALL void GL_APIENTRY glGetShaderInfoLog (GLuint shader, GLsizei bufSize, GLsizei *length, GLchar *infoLog); | ^ /usr/include/GL/glew.h:22419:43: note: previous declaration ‘void (* __glewGetShaderInfoLog)(GLuint, GLsizei, GLsizei*, GLchar*)’ 22419 | GLEW_FUN_EXPORT PFNGLGETSHADERINFOLOGPROC __glewGetShaderInfoLog; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:576:128: error: ‘void __glewGetShaderPrecisionFormat(GLenum, GLenum, GLint*, GLint*)’ redeclared as different kind of entity 576 | GL_APICALL void GL_APIENTRY glGetShaderPrecisionFormat (GLenum shadertype, GLenum precisiontype, GLint *range, GLint *precision); | ^ /usr/include/GL/glew.h:22716:51: note: previous declaration ‘void (* __glewGetShaderPrecisionFormat)(GLenum, GLenum, GLint*, GLint*)’ 22716 | GLEW_FUN_EXPORT PFNGLGETSHADERPRECISIONFORMATPROC __glewGetShaderPrecisionFormat; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:577:111: error: ‘void __glewGetShaderSource(GLuint, GLsizei, GLsizei*, GLchar*)’ redeclared as different kind of entity 577 | GL_APICALL void GL_APIENTRY glGetShaderSource (GLuint shader, GLsizei bufSize, GLsizei *length, GLchar *source); | ^ /usr/include/GL/glew.h:22420:42: note: previous declaration ‘void (* __glewGetShaderSource)(GLuint, GLsizei, GLsizei*, GLchar*)’ 22420 | GLEW_FUN_EXPORT PFNGLGETSHADERSOURCEPROC __glewGetShaderSource; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:581:92: error: ‘void __glewGetUniformfv(GLuint, GLint, GLfloat*)’ redeclared as different kind of entity 581 | GL_APICALL void GL_APIENTRY glGetUniformfv (GLuint program, GLint location, GLfloat *params); | ^ /usr/include/GL/glew.h:22423:39: note: previous declaration ‘void (* __glewGetUniformfv)(GLuint, GLint, GLfloat*)’ 22423 | GLEW_FUN_EXPORT PFNGLGETUNIFORMFVPROC __glewGetUniformfv; | ^~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:582:90: error: ‘void __glewGetUniformiv(GLuint, GLint, GLint*)’ redeclared as different kind of entity 582 | GL_APICALL void GL_APIENTRY glGetUniformiv (GLuint program, GLint location, GLint *params); | ^ /usr/include/GL/glew.h:22424:39: note: previous declaration ‘void (* __glewGetUniformiv)(GLuint, GLint, GLint*)’ 22424 | GLEW_FUN_EXPORT PFNGLGETUNIFORMIVPROC __glewGetUniformiv; | ^~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:583:86: error: ‘GLint __glewGetUniformLocation(GLuint, const GLchar*)’ redeclared as different kind of entity 583 | GL_APICALL GLint GL_APIENTRY glGetUniformLocation (GLuint program, const GLchar *name); | ^ /usr/include/GL/glew.h:22422:45: note: previous declaration ‘GLint (* __glewGetUniformLocation)(GLuint, const GLchar*)’ 22422 | GLEW_FUN_EXPORT PFNGLGETUNIFORMLOCATIONPROC __glewGetUniformLocation; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:584:93: error: ‘void __glewGetVertexAttribfv(GLuint, GLenum, GLfloat*)’ redeclared as different kind of entity 584 | GL_APICALL void GL_APIENTRY glGetVertexAttribfv (GLuint index, GLenum pname, GLfloat *params); | ^ /usr/include/GL/glew.h:22427:44: note: previous declaration ‘void (* __glewGetVertexAttribfv)(GLuint, GLenum, GLfloat*)’ 22427 | GLEW_FUN_EXPORT PFNGLGETVERTEXATTRIBFVPROC __glewGetVertexAttribfv; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:585:91: error: ‘void __glewGetVertexAttribiv(GLuint, GLenum, GLint*)’ redeclared as different kind of entity 585 | GL_APICALL void GL_APIENTRY glGetVertexAttribiv (GLuint index, GLenum pname, GLint *params); | ^ /usr/include/GL/glew.h:22428:44: note: previous declaration ‘void (* __glewGetVertexAttribiv)(GLuint, GLenum, GLint*)’ 22428 | GLEW_FUN_EXPORT PFNGLGETVERTEXATTRIBIVPROC __glewGetVertexAttribiv; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:586:98: error: ‘void __glewGetVertexAttribPointerv(GLuint, GLenum, void**)’ redeclared as different kind of entity 586 | GL_APICALL void GL_APIENTRY glGetVertexAttribPointerv (GLuint index, GLenum pname, void **pointer); | ^ /usr/include/GL/glew.h:22425:50: note: previous declaration ‘void (* __glewGetVertexAttribPointerv)(GLuint, GLenum, void**)’ 22425 | GLEW_FUN_EXPORT PFNGLGETVERTEXATTRIBPOINTERVPROC __glewGetVertexAttribPointerv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:588:59: error: ‘GLboolean __glewIsBuffer(GLuint)’ redeclared as different kind of entity 588 | GL_APICALL GLboolean GL_APIENTRY glIsBuffer (GLuint buffer); | ^ /usr/include/GL/glew.h:22396:35: note: previous declaration ‘GLboolean (* __glewIsBuffer)(GLuint)’ 22396 | GLEW_FUN_EXPORT PFNGLISBUFFERPROC __glewIsBuffer; | ^~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:590:69: error: ‘GLboolean __glewIsFramebuffer(GLuint)’ redeclared as different kind of entity 590 | GL_APICALL GLboolean GL_APIENTRY glIsFramebuffer (GLuint framebuffer); | ^ /usr/include/GL/glew.h:22912:40: note: previous declaration ‘GLboolean (* __glewIsFramebuffer)(GLuint)’ 22912 | GLEW_FUN_EXPORT PFNGLISFRAMEBUFFERPROC __glewIsFramebuffer; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:591:61: error: ‘GLboolean __glewIsProgram(GLuint)’ redeclared as different kind of entity 591 | GL_APICALL GLboolean GL_APIENTRY glIsProgram (GLuint program); | ^ /usr/include/GL/glew.h:22429:36: note: previous declaration ‘GLboolean (* __glewIsProgram)(GLuint)’ 22429 | GLEW_FUN_EXPORT PFNGLISPROGRAMPROC __glewIsProgram; | ^~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:592:71: error: ‘GLboolean __glewIsRenderbuffer(GLuint)’ redeclared as different kind of entity 592 | GL_APICALL GLboolean GL_APIENTRY glIsRenderbuffer (GLuint renderbuffer); | ^ /usr/include/GL/glew.h:22913:41: note: previous declaration ‘GLboolean (* __glewIsRenderbuffer)(GLuint)’ 22913 | GLEW_FUN_EXPORT PFNGLISRENDERBUFFERPROC __glewIsRenderbuffer; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:593:59: error: ‘GLboolean __glewIsShader(GLuint)’ redeclared as different kind of entity 593 | GL_APICALL GLboolean GL_APIENTRY glIsShader (GLuint shader); | ^ /usr/include/GL/glew.h:22430:35: note: previous declaration ‘GLboolean (* __glewIsShader)(GLuint)’ 22430 | GLEW_FUN_EXPORT PFNGLISSHADERPROC __glewIsShader; | ^~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:596:58: error: ‘void __glewLinkProgram(GLuint)’ redeclared as different kind of entity 596 | GL_APICALL void GL_APIENTRY glLinkProgram (GLuint program); | ^ /usr/include/GL/glew.h:22431:38: note: previous declaration ‘void (* __glewLinkProgram)(GLuint)’ 22431 | GLEW_FUN_EXPORT PFNGLLINKPROGRAMPROC __glewLinkProgram; | ^~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:600:58: error: ‘void __glewReleaseShaderCompiler()’ redeclared as different kind of entity 600 | GL_APICALL void GL_APIENTRY glReleaseShaderCompiler (void); | ^ /usr/include/GL/glew.h:22717:48: note: previous declaration ‘void (* __glewReleaseShaderCompiler)()’ 22717 | GLEW_FUN_EXPORT PFNGLRELEASESHADERCOMPILERPROC __glewReleaseShaderCompiler; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:601:119: error: ‘void __glewRenderbufferStorage(GLenum, GLenum, GLsizei, GLsizei)’ redeclared as different kind of entity 601 | GL_APICALL void GL_APIENTRY glRenderbufferStorage (GLenum target, GLenum internalformat, GLsizei width, GLsizei height); | ^ /usr/include/GL/glew.h:22914:46: note: previous declaration ‘void (* __glewRenderbufferStorage)(GLenum, GLenum, GLsizei, GLsizei)’ 22914 | GLEW_FUN_EXPORT PFNGLRENDERBUFFERSTORAGEPROC __glewRenderbufferStorage; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:602:78: error: ‘void __glewSampleCoverage(GLfloat, GLboolean)’ redeclared as different kind of entity 602 | GL_APICALL void GL_APIENTRY glSampleCoverage (GLfloat value, GLboolean invert); | ^ /usr/include/GL/glew.h:22331:41: note: previous declaration ‘void (* __glewSampleCoverage)(GLclampf, GLboolean)’ 22331 | GLEW_FUN_EXPORT PFNGLSAMPLECOVERAGEPROC __glewSampleCoverage; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:604:138: error: ‘void __glewShaderBinary(GLsizei, const GLuint*, GLenum, const void*, GLsizei)’ redeclared as different kind of entity 604 | GL_APICALL void GL_APIENTRY glShaderBinary (GLsizei count, const GLuint *shaders, GLenum binaryformat, const void *binary, GLsizei length); | ^ /usr/include/GL/glew.h:22718:39: note: previous declaration ‘void (* __glewShaderBinary)(GLsizei, const GLuint*, GLenum, const void*, GLsizei)’ 22718 | GLEW_FUN_EXPORT PFNGLSHADERBINARYPROC __glewShaderBinary; | ^~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:605:122: error: ‘void __glewShaderSource(GLuint, GLsizei, const GLchar* const*, const GLint*)’ redeclared as different kind of entity 605 | GL_APICALL void GL_APIENTRY glShaderSource (GLuint shader, GLsizei count, const GLchar *const*string, const GLint *length); | ^ /usr/include/GL/glew.h:22432:39: note: previous declaration ‘void (* __glewShaderSource)(GLuint, GLsizei, const GLchar* const*, const GLint*)’ 22432 | GLEW_FUN_EXPORT PFNGLSHADERSOURCEPROC __glewShaderSource; | ^~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:607:100: error: ‘void __glewStencilFuncSeparate(GLenum, GLenum, GLint, GLuint)’ redeclared as different kind of entity 607 | GL_APICALL void GL_APIENTRY glStencilFuncSeparate (GLenum face, GLenum func, GLint ref, GLuint mask); | ^ /usr/include/GL/glew.h:22433:46: note: previous declaration ‘void (* __glewStencilFuncSeparate)(GLenum, GLenum, GLint, GLuint)’ 22433 | GLEW_FUN_EXPORT PFNGLSTENCILFUNCSEPARATEPROC __glewStencilFuncSeparate; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:609:76: error: ‘void __glewStencilMaskSeparate(GLenum, GLuint)’ redeclared as different kind of entity 609 | GL_APICALL void GL_APIENTRY glStencilMaskSeparate (GLenum face, GLuint mask); | ^ /usr/include/GL/glew.h:22434:46: note: previous declaration ‘void (* __glewStencilMaskSeparate)(GLenum, GLuint)’ 22434 | GLEW_FUN_EXPORT PFNGLSTENCILMASKSEPARATEPROC __glewStencilMaskSeparate; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:611:105: error: ‘void __glewStencilOpSeparate(GLenum, GLenum, GLenum, GLenum)’ redeclared as different kind of entity 611 | GL_APICALL void GL_APIENTRY glStencilOpSeparate (GLenum face, GLenum sfail, GLenum dpfail, GLenum dppass); | ^ /usr/include/GL/glew.h:22435:44: note: previous declaration ‘void (* __glewStencilOpSeparate)(GLenum, GLenum, GLenum, GLenum)’ 22435 | GLEW_FUN_EXPORT PFNGLSTENCILOPSEPARATEPROC __glewStencilOpSeparate; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:618:68: error: ‘void __glewUniform1f(GLint, GLfloat)’ redeclared as different kind of entity 618 | GL_APICALL void GL_APIENTRY glUniform1f (GLint location, GLfloat v0); | ^ /usr/include/GL/glew.h:22436:36: note: previous declaration ‘void (* __glewUniform1f)(GLint, GLfloat)’ 22436 | GLEW_FUN_EXPORT PFNGLUNIFORM1FPROC __glewUniform1f; | ^~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:619:94: error: ‘void __glewUniform1fv(GLint, GLsizei, const GLfloat*)’ redeclared as different kind of entity 619 | GL_APICALL void GL_APIENTRY glUniform1fv (GLint location, GLsizei count, const GLfloat *value); | ^ /usr/include/GL/glew.h:22437:37: note: previous declaration ‘void (* __glewUniform1fv)(GLint, GLsizei, const GLfloat*)’ 22437 | GLEW_FUN_EXPORT PFNGLUNIFORM1FVPROC __glewUniform1fv; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:620:66: error: ‘void __glewUniform1i(GLint, GLint)’ redeclared as different kind of entity 620 | GL_APICALL void GL_APIENTRY glUniform1i (GLint location, GLint v0); | ^ /usr/include/GL/glew.h:22438:36: note: previous declaration ‘void (* __glewUniform1i)(GLint, GLint)’ 22438 | GLEW_FUN_EXPORT PFNGLUNIFORM1IPROC __glewUniform1i; | ^~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:621:92: error: ‘void __glewUniform1iv(GLint, GLsizei, const GLint*)’ redeclared as different kind of entity 621 | GL_APICALL void GL_APIENTRY glUniform1iv (GLint location, GLsizei count, const GLint *value); | ^ /usr/include/GL/glew.h:22439:37: note: previous declaration ‘void (* __glewUniform1iv)(GLint, GLsizei, const GLint*)’ 22439 | GLEW_FUN_EXPORT PFNGLUNIFORM1IVPROC __glewUniform1iv; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:622:80: error: ‘void __glewUniform2f(GLint, GLfloat, GLfloat)’ redeclared as different kind of entity 622 | GL_APICALL void GL_APIENTRY glUniform2f (GLint location, GLfloat v0, GLfloat v1); | ^ /usr/include/GL/glew.h:22440:36: note: previous declaration ‘void (* __glewUniform2f)(GLint, GLfloat, GLfloat)’ 22440 | GLEW_FUN_EXPORT PFNGLUNIFORM2FPROC __glewUniform2f; | ^~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:623:94: error: ‘void __glewUniform2fv(GLint, GLsizei, const GLfloat*)’ redeclared as different kind of entity 623 | GL_APICALL void GL_APIENTRY glUniform2fv (GLint location, GLsizei count, const GLfloat *value); | ^ /usr/include/GL/glew.h:22441:37: note: previous declaration ‘void (* __glewUniform2fv)(GLint, GLsizei, const GLfloat*)’ 22441 | GLEW_FUN_EXPORT PFNGLUNIFORM2FVPROC __glewUniform2fv; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:624:76: error: ‘void __glewUniform2i(GLint, GLint, GLint)’ redeclared as different kind of entity 624 | GL_APICALL void GL_APIENTRY glUniform2i (GLint location, GLint v0, GLint v1); | ^ /usr/include/GL/glew.h:22442:36: note: previous declaration ‘void (* __glewUniform2i)(GLint, GLint, GLint)’ 22442 | GLEW_FUN_EXPORT PFNGLUNIFORM2IPROC __glewUniform2i; | ^~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:625:92: error: ‘void __glewUniform2iv(GLint, GLsizei, const GLint*)’ redeclared as different kind of entity 625 | GL_APICALL void GL_APIENTRY glUniform2iv (GLint location, GLsizei count, const GLint *value); | ^ /usr/include/GL/glew.h:22443:37: note: previous declaration ‘void (* __glewUniform2iv)(GLint, GLsizei, const GLint*)’ 22443 | GLEW_FUN_EXPORT PFNGLUNIFORM2IVPROC __glewUniform2iv; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:626:92: error: ‘void __glewUniform3f(GLint, GLfloat, GLfloat, GLfloat)’ redeclared as different kind of entity 626 | GL_APICALL void GL_APIENTRY glUniform3f (GLint location, GLfloat v0, GLfloat v1, GLfloat v2); | ^ /usr/include/GL/glew.h:22444:36: note: previous declaration ‘void (* __glewUniform3f)(GLint, GLfloat, GLfloat, GLfloat)’ 22444 | GLEW_FUN_EXPORT PFNGLUNIFORM3FPROC __glewUniform3f; | ^~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:627:94: error: ‘void __glewUniform3fv(GLint, GLsizei, const GLfloat*)’ redeclared as different kind of entity 627 | GL_APICALL void GL_APIENTRY glUniform3fv (GLint location, GLsizei count, const GLfloat *value); | ^ /usr/include/GL/glew.h:22445:37: note: previous declaration ‘void (* __glewUniform3fv)(GLint, GLsizei, const GLfloat*)’ 22445 | GLEW_FUN_EXPORT PFNGLUNIFORM3FVPROC __glewUniform3fv; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:628:86: error: ‘void __glewUniform3i(GLint, GLint, GLint, GLint)’ redeclared as different kind of entity 628 | GL_APICALL void GL_APIENTRY glUniform3i (GLint location, GLint v0, GLint v1, GLint v2); | ^ /usr/include/GL/glew.h:22446:36: note: previous declaration ‘void (* __glewUniform3i)(GLint, GLint, GLint, GLint)’ 22446 | GLEW_FUN_EXPORT PFNGLUNIFORM3IPROC __glewUniform3i; | ^~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:629:92: error: ‘void __glewUniform3iv(GLint, GLsizei, const GLint*)’ redeclared as different kind of entity 629 | GL_APICALL void GL_APIENTRY glUniform3iv (GLint location, GLsizei count, const GLint *value); | ^ /usr/include/GL/glew.h:22447:37: note: previous declaration ‘void (* __glewUniform3iv)(GLint, GLsizei, const GLint*)’ 22447 | GLEW_FUN_EXPORT PFNGLUNIFORM3IVPROC __glewUniform3iv; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:630:104: error: ‘void __glewUniform4f(GLint, GLfloat, GLfloat, GLfloat, GLfloat)’ redeclared as different kind of entity 630 | GL_APICALL void GL_APIENTRY glUniform4f (GLint location, GLfloat v0, GLfloat v1, GLfloat v2, GLfloat v3); | ^ /usr/include/GL/glew.h:22448:36: note: previous declaration ‘void (* __glewUniform4f)(GLint, GLfloat, GLfloat, GLfloat, GLfloat)’ 22448 | GLEW_FUN_EXPORT PFNGLUNIFORM4FPROC __glewUniform4f; | ^~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:631:94: error: ‘void __glewUniform4fv(GLint, GLsizei, const GLfloat*)’ redeclared as different kind of entity 631 | GL_APICALL void GL_APIENTRY glUniform4fv (GLint location, GLsizei count, const GLfloat *value); | ^ /usr/include/GL/glew.h:22449:37: note: previous declaration ‘void (* __glewUniform4fv)(GLint, GLsizei, const GLfloat*)’ 22449 | GLEW_FUN_EXPORT PFNGLUNIFORM4FVPROC __glewUniform4fv; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:632:96: error: ‘void __glewUniform4i(GLint, GLint, GLint, GLint, GLint)’ redeclared as different kind of entity 632 | GL_APICALL void GL_APIENTRY glUniform4i (GLint location, GLint v0, GLint v1, GLint v2, GLint v3); | ^ /usr/include/GL/glew.h:22450:36: note: previous declaration ‘void (* __glewUniform4i)(GLint, GLint, GLint, GLint, GLint)’ 22450 | GLEW_FUN_EXPORT PFNGLUNIFORM4IPROC __glewUniform4i; | ^~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:633:92: error: ‘void __glewUniform4iv(GLint, GLsizei, const GLint*)’ redeclared as different kind of entity 633 | GL_APICALL void GL_APIENTRY glUniform4iv (GLint location, GLsizei count, const GLint *value); | ^ /usr/include/GL/glew.h:22451:37: note: previous declaration ‘void (* __glewUniform4iv)(GLint, GLsizei, const GLint*)’ 22451 | GLEW_FUN_EXPORT PFNGLUNIFORM4IVPROC __glewUniform4iv; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:634:121: error: ‘void __glewUniformMatrix2fv(GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 634 | GL_APICALL void GL_APIENTRY glUniformMatrix2fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:22452:43: note: previous declaration ‘void (* __glewUniformMatrix2fv)(GLint, GLsizei, GLboolean, const GLfloat*)’ 22452 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX2FVPROC __glewUniformMatrix2fv; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:635:121: error: ‘void __glewUniformMatrix3fv(GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 635 | GL_APICALL void GL_APIENTRY glUniformMatrix3fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:22453:43: note: previous declaration ‘void (* __glewUniformMatrix3fv)(GLint, GLsizei, GLboolean, const GLfloat*)’ 22453 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX3FVPROC __glewUniformMatrix3fv; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:636:121: error: ‘void __glewUniformMatrix4fv(GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 636 | GL_APICALL void GL_APIENTRY glUniformMatrix4fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:22454:43: note: previous declaration ‘void (* __glewUniformMatrix4fv)(GLint, GLsizei, GLboolean, const GLfloat*)’ 22454 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX4FVPROC __glewUniformMatrix4fv; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:637:57: error: ‘void __glewUseProgram(GLuint)’ redeclared as different kind of entity 637 | GL_APICALL void GL_APIENTRY glUseProgram (GLuint program); | ^ /usr/include/GL/glew.h:22455:37: note: previous declaration ‘void (* __glewUseProgram)(GLuint)’ 22455 | GLEW_FUN_EXPORT PFNGLUSEPROGRAMPROC __glewUseProgram; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:638:62: error: ‘void __glewValidateProgram(GLuint)’ redeclared as different kind of entity 638 | GL_APICALL void GL_APIENTRY glValidateProgram (GLuint program); | ^ /usr/include/GL/glew.h:22456:42: note: previous declaration ‘void (* __glewValidateProgram)(GLuint)’ 22456 | GLEW_FUN_EXPORT PFNGLVALIDATEPROGRAMPROC __glewValidateProgram; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:639:70: error: ‘void __glewVertexAttrib1f(GLuint, GLfloat)’ redeclared as different kind of entity 639 | GL_APICALL void GL_APIENTRY glVertexAttrib1f (GLuint index, GLfloat x); | ^ /usr/include/GL/glew.h:22459:41: note: previous declaration ‘void (* __glewVertexAttrib1f)(GLuint, GLfloat)’ 22459 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIB1FPROC __glewVertexAttrib1f; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:640:78: error: ‘void __glewVertexAttrib1fv(GLuint, const GLfloat*)’ redeclared as different kind of entity 640 | GL_APICALL void GL_APIENTRY glVertexAttrib1fv (GLuint index, const GLfloat *v); | ^ /usr/include/GL/glew.h:22460:42: note: previous declaration ‘void (* __glewVertexAttrib1fv)(GLuint, const GLfloat*)’ 22460 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIB1FVPROC __glewVertexAttrib1fv; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:641:81: error: ‘void __glewVertexAttrib2f(GLuint, GLfloat, GLfloat)’ redeclared as different kind of entity 641 | GL_APICALL void GL_APIENTRY glVertexAttrib2f (GLuint index, GLfloat x, GLfloat y); | ^ /usr/include/GL/glew.h:22465:41: note: previous declaration ‘void (* __glewVertexAttrib2f)(GLuint, GLfloat, GLfloat)’ 22465 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIB2FPROC __glewVertexAttrib2f; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:642:78: error: ‘void __glewVertexAttrib2fv(GLuint, const GLfloat*)’ redeclared as different kind of entity 642 | GL_APICALL void GL_APIENTRY glVertexAttrib2fv (GLuint index, const GLfloat *v); | ^ /usr/include/GL/glew.h:22466:42: note: previous declaration ‘void (* __glewVertexAttrib2fv)(GLuint, const GLfloat*)’ 22466 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIB2FVPROC __glewVertexAttrib2fv; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:643:92: error: ‘void __glewVertexAttrib3f(GLuint, GLfloat, GLfloat, GLfloat)’ redeclared as different kind of entity 643 | GL_APICALL void GL_APIENTRY glVertexAttrib3f (GLuint index, GLfloat x, GLfloat y, GLfloat z); | ^ /usr/include/GL/glew.h:22471:41: note: previous declaration ‘void (* __glewVertexAttrib3f)(GLuint, GLfloat, GLfloat, GLfloat)’ 22471 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIB3FPROC __glewVertexAttrib3f; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:644:78: error: ‘void __glewVertexAttrib3fv(GLuint, const GLfloat*)’ redeclared as different kind of entity 644 | GL_APICALL void GL_APIENTRY glVertexAttrib3fv (GLuint index, const GLfloat *v); | ^ /usr/include/GL/glew.h:22472:42: note: previous declaration ‘void (* __glewVertexAttrib3fv)(GLuint, const GLfloat*)’ 22472 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIB3FVPROC __glewVertexAttrib3fv; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:645:103: error: ‘void __glewVertexAttrib4f(GLuint, GLfloat, GLfloat, GLfloat, GLfloat)’ redeclared as different kind of entity 645 | GL_APICALL void GL_APIENTRY glVertexAttrib4f (GLuint index, GLfloat x, GLfloat y, GLfloat z, GLfloat w); | ^ /usr/include/GL/glew.h:22485:41: note: previous declaration ‘void (* __glewVertexAttrib4f)(GLuint, GLfloat, GLfloat, GLfloat, GLfloat)’ 22485 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIB4FPROC __glewVertexAttrib4f; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:646:78: error: ‘void __glewVertexAttrib4fv(GLuint, const GLfloat*)’ redeclared as different kind of entity 646 | GL_APICALL void GL_APIENTRY glVertexAttrib4fv (GLuint index, const GLfloat *v); | ^ /usr/include/GL/glew.h:22486:42: note: previous declaration ‘void (* __glewVertexAttrib4fv)(GLuint, const GLfloat*)’ 22486 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIB4FVPROC __glewVertexAttrib4fv; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:647:148: error: ‘void __glewVertexAttribPointer(GLuint, GLint, GLenum, GLboolean, GLsizei, const void*)’ redeclared as different kind of entity 647 | GL_APICALL void GL_APIENTRY glVertexAttribPointer (GLuint index, GLint size, GLenum type, GLboolean normalized, GLsizei stride, const void *pointer); | ^ /usr/include/GL/glew.h:22493:46: note: previous declaration ‘void (* __glewVertexAttribPointer)(GLuint, GLint, GLenum, GLboolean, GLsizei, const void*)’ 22493 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBPOINTERPROC __glewVertexAttribPointer; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1082:136: error: ‘void __glewDrawRangeElements(GLenum, GLuint, GLuint, GLsizei, GLenum, const void*)’ redeclared as different kind of entity 1082 | GL_APICALL void GL_APIENTRY glDrawRangeElements (GLenum mode, GLuint start, GLuint end, GLsizei count, GLenum type, const void *indices); | ^ /usr/include/GL/glew.h:22282:44: note: previous declaration ‘void (* __glewDrawRangeElements)(GLenum, GLuint, GLuint, GLsizei, GLenum, const void*)’ 22282 | GLEW_FUN_EXPORT PFNGLDRAWRANGEELEMENTSPROC __glewDrawRangeElements; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1083:199: error: ‘void __glewTexImage3D(GLenum, GLint, GLint, GLsizei, GLsizei, GLsizei, GLint, GLenum, GLenum, const void*)’ redeclared as different kind of entity 1083 | GL_APICALL void GL_APIENTRY glTexImage3D (GLenum target, GLint level, GLint internalformat, GLsizei width, GLsizei height, GLsizei depth, GLint border, GLenum format, GLenum type, const void *pixels); | ^ /usr/include/GL/glew.h:22283:37: note: previous declaration ‘void (* __glewTexImage3D)(GLenum, GLint, GLint, GLsizei, GLsizei, GLsizei, GLint, GLenum, GLenum, const void*)’ 22283 | GLEW_FUN_EXPORT PFNGLTEXIMAGE3DPROC __glewTexImage3D; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1084:211: error: ‘void __glewTexSubImage3D(GLenum, GLint, GLint, GLint, GLint, GLsizei, GLsizei, GLsizei, GLenum, GLenum, const void*)’ redeclared as different kind of entity 1084 | GL_APICALL void GL_APIENTRY glTexSubImage3D (GLenum target, GLint level, GLint xoffset, GLint yoffset, GLint zoffset, GLsizei width, GLsizei height, GLsizei depth, GLenum format, GLenum type, const void *pixels); | ^ /usr/include/GL/glew.h:22284:40: note: previous declaration ‘void (* __glewTexSubImage3D)(GLenum, GLint, GLint, GLint, GLint, GLsizei, GLsizei, GLsizei, GLenum, GLenum, const void*)’ 22284 | GLEW_FUN_EXPORT PFNGLTEXSUBIMAGE3DPROC __glewTexSubImage3D; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1085:170: error: ‘void __glewCopyTexSubImage3D(GLenum, GLint, GLint, GLint, GLint, GLint, GLint, GLsizei, GLsizei)’ redeclared as different kind of entity 1085 | GL_APICALL void GL_APIENTRY glCopyTexSubImage3D (GLenum target, GLint level, GLint xoffset, GLint yoffset, GLint zoffset, GLint x, GLint y, GLsizei width, GLsizei height); | ^ /usr/include/GL/glew.h:22281:44: note: previous declaration ‘void (* __glewCopyTexSubImage3D)(GLenum, GLint, GLint, GLint, GLint, GLint, GLint, GLsizei, GLsizei)’ 22281 | GLEW_FUN_EXPORT PFNGLCOPYTEXSUBIMAGE3DPROC __glewCopyTexSubImage3D; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1086:199: error: ‘void __glewCompressedTexImage3D(GLenum, GLint, GLenum, GLsizei, GLsizei, GLsizei, GLint, GLsizei, const void*)’ redeclared as different kind of entity 1086 | GL_APICALL void GL_APIENTRY glCompressedTexImage3D (GLenum target, GLint level, GLenum internalformat, GLsizei width, GLsizei height, GLsizei depth, GLint border, GLsizei imageSize, const void *data); | ^ /usr/include/GL/glew.h:22290:47: note: previous declaration ‘void (* __glewCompressedTexImage3D)(GLenum, GLint, GLenum, GLsizei, GLsizei, GLsizei, GLint, GLsizei, const void*)’ 22290 | GLEW_FUN_EXPORT PFNGLCOMPRESSEDTEXIMAGE3DPROC __glewCompressedTexImage3D; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1087:225: error: ‘void __glewCompressedTexSubImage3D(GLenum, GLint, GLint, GLint, GLint, GLsizei, GLsizei, GLsizei, GLenum, GLsizei, const void*)’ redeclared as different kind of entity 1087 | GL_APICALL void GL_APIENTRY glCompressedTexSubImage3D (GLenum target, GLint level, GLint xoffset, GLint yoffset, GLint zoffset, GLsizei width, GLsizei height, GLsizei depth, GLenum format, GLsizei imageSize, const void *data); | ^ /usr/include/GL/glew.h:22293:50: note: previous declaration ‘void (* __glewCompressedTexSubImage3D)(GLenum, GLint, GLint, GLint, GLint, GLsizei, GLsizei, GLsizei, GLenum, GLsizei, const void*)’ 22293 | GLEW_FUN_EXPORT PFNGLCOMPRESSEDTEXSUBIMAGE3DPROC __glewCompressedTexSubImage3D; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1088:65: error: ‘void __glewGenQueries(GLsizei, GLuint*)’ redeclared as different kind of entity 1088 | GL_APICALL void GL_APIENTRY glGenQueries (GLsizei n, GLuint *ids); | ^ /usr/include/GL/glew.h:22389:37: note: previous declaration ‘void (* __glewGenQueries)(GLsizei, GLuint*)’ 22389 | GLEW_FUN_EXPORT PFNGLGENQUERIESPROC __glewGenQueries; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1089:74: error: ‘void __glewDeleteQueries(GLsizei, const GLuint*)’ redeclared as different kind of entity 1089 | GL_APICALL void GL_APIENTRY glDeleteQueries (GLsizei n, const GLuint *ids); | ^ /usr/include/GL/glew.h:22386:40: note: previous declaration ‘void (* __glewDeleteQueries)(GLsizei, const GLuint*)’ 22386 | GLEW_FUN_EXPORT PFNGLDELETEQUERIESPROC __glewDeleteQueries; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1090:54: error: ‘GLboolean __glewIsQuery(GLuint)’ redeclared as different kind of entity 1090 | GL_APICALL GLboolean GL_APIENTRY glIsQuery (GLuint id); | ^ /usr/include/GL/glew.h:22397:34: note: previous declaration ‘GLboolean (* __glewIsQuery)(GLuint)’ 22397 | GLEW_FUN_EXPORT PFNGLISQUERYPROC __glewIsQuery; | ^~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1091:67: error: ‘void __glewBeginQuery(GLenum, GLuint)’ redeclared as different kind of entity 1091 | GL_APICALL void GL_APIENTRY glBeginQuery (GLenum target, GLuint id); | ^ /usr/include/GL/glew.h:22381:37: note: previous declaration ‘void (* __glewBeginQuery)(GLenum, GLuint)’ 22381 | GLEW_FUN_EXPORT PFNGLBEGINQUERYPROC __glewBeginQuery; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1092:54: error: ‘void __glewEndQuery(GLenum)’ redeclared as different kind of entity 1092 | GL_APICALL void GL_APIENTRY glEndQuery (GLenum target); | ^ /usr/include/GL/glew.h:22387:35: note: previous declaration ‘void (* __glewEndQuery)(GLenum)’ 22387 | GLEW_FUN_EXPORT PFNGLENDQUERYPROC __glewEndQuery; | ^~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1093:85: error: ‘void __glewGetQueryiv(GLenum, GLenum, GLint*)’ redeclared as different kind of entity 1093 | GL_APICALL void GL_APIENTRY glGetQueryiv (GLenum target, GLenum pname, GLint *params); | ^ /usr/include/GL/glew.h:22395:37: note: previous declaration ‘void (* __glewGetQueryiv)(GLenum, GLenum, GLint*)’ 22395 | GLEW_FUN_EXPORT PFNGLGETQUERYIVPROC __glewGetQueryiv; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1094:89: error: ‘void __glewGetQueryObjectuiv(GLuint, GLenum, GLuint*)’ redeclared as different kind of entity 1094 | GL_APICALL void GL_APIENTRY glGetQueryObjectuiv (GLuint id, GLenum pname, GLuint *params); | ^ /usr/include/GL/glew.h:22394:44: note: previous declaration ‘void (* __glewGetQueryObjectuiv)(GLuint, GLenum, GLuint*)’ 22394 | GLEW_FUN_EXPORT PFNGLGETQUERYOBJECTUIVPROC __glewGetQueryObjectuiv; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1095:62: error: ‘GLboolean __glewUnmapBuffer(GLenum)’ redeclared as different kind of entity 1095 | GL_APICALL GLboolean GL_APIENTRY glUnmapBuffer (GLenum target); | ^ /usr/include/GL/glew.h:22399:38: note: previous declaration ‘GLboolean (* __glewUnmapBuffer)(GLenum)’ 22399 | GLEW_FUN_EXPORT PFNGLUNMAPBUFFERPROC __glewUnmapBuffer; | ^~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1096:92: error: ‘void __glewGetBufferPointerv(GLenum, GLenum, void**)’ redeclared as different kind of entity 1096 | GL_APICALL void GL_APIENTRY glGetBufferPointerv (GLenum target, GLenum pname, void **params); | ^ /usr/include/GL/glew.h:22391:44: note: previous declaration ‘void (* __glewGetBufferPointerv)(GLenum, GLenum, void**)’ 22391 | GLEW_FUN_EXPORT PFNGLGETBUFFERPOINTERVPROC __glewGetBufferPointerv; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1097:73: error: ‘void __glewDrawBuffers(GLsizei, const GLenum*)’ redeclared as different kind of entity 1097 | GL_APICALL void GL_APIENTRY glDrawBuffers (GLsizei n, const GLenum *bufs); | ^ /usr/include/GL/glew.h:22411:38: note: previous declaration ‘void (* __glewDrawBuffers)(GLsizei, const GLenum*)’ 22411 | GLEW_FUN_EXPORT PFNGLDRAWBUFFERSPROC __glewDrawBuffers; | ^~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1098:123: error: ‘void __glewUniformMatrix2x3fv(GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 1098 | GL_APICALL void GL_APIENTRY glUniformMatrix2x3fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:22495:45: note: previous declaration ‘void (* __glewUniformMatrix2x3fv)(GLint, GLsizei, GLboolean, const GLfloat*)’ 22495 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX2X3FVPROC __glewUniformMatrix2x3fv; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1099:123: error: ‘void __glewUniformMatrix3x2fv(GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 1099 | GL_APICALL void GL_APIENTRY glUniformMatrix3x2fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:22497:45: note: previous declaration ‘void (* __glewUniformMatrix3x2fv)(GLint, GLsizei, GLboolean, const GLfloat*)’ 22497 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX3X2FVPROC __glewUniformMatrix3x2fv; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1100:123: error: ‘void __glewUniformMatrix2x4fv(GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 1100 | GL_APICALL void GL_APIENTRY glUniformMatrix2x4fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:22496:45: note: previous declaration ‘void (* __glewUniformMatrix2x4fv)(GLint, GLsizei, GLboolean, const GLfloat*)’ 22496 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX2X4FVPROC __glewUniformMatrix2x4fv; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1101:123: error: ‘void __glewUniformMatrix4x2fv(GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 1101 | GL_APICALL void GL_APIENTRY glUniformMatrix4x2fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:22499:45: note: previous declaration ‘void (* __glewUniformMatrix4x2fv)(GLint, GLsizei, GLboolean, const GLfloat*)’ 22499 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX4X2FVPROC __glewUniformMatrix4x2fv; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1102:123: error: ‘void __glewUniformMatrix3x4fv(GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 1102 | GL_APICALL void GL_APIENTRY glUniformMatrix3x4fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:22498:45: note: previous declaration ‘void (* __glewUniformMatrix3x4fv)(GLint, GLsizei, GLboolean, const GLfloat*)’ 22498 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX3X4FVPROC __glewUniformMatrix3x4fv; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1103:123: error: ‘void __glewUniformMatrix4x3fv(GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 1103 | GL_APICALL void GL_APIENTRY glUniformMatrix4x3fv (GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:22500:45: note: previous declaration ‘void (* __glewUniformMatrix4x3fv)(GLint, GLsizei, GLboolean, const GLfloat*)’ 22500 | GLEW_FUN_EXPORT PFNGLUNIFORMMATRIX4X3FVPROC __glewUniformMatrix4x3fv; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1104:182: error: ‘void __glewBlitFramebuffer(GLint, GLint, GLint, GLint, GLint, GLint, GLint, GLint, GLbitfield, GLenum)’ redeclared as different kind of entity 1104 | GL_APICALL void GL_APIENTRY glBlitFramebuffer (GLint srcX0, GLint srcY0, GLint srcX1, GLint srcY1, GLint dstX0, GLint dstY0, GLint dstX1, GLint dstY1, GLbitfield mask, GLenum filter); | ^ /usr/include/GL/glew.h:22898:42: note: previous declaration ‘void (* __glewBlitFramebuffer)(GLint, GLint, GLint, GLint, GLint, GLint, GLint, GLint, GLbitfield, GLenum)’ 22898 | GLEW_FUN_EXPORT PFNGLBLITFRAMEBUFFERPROC __glewBlitFramebuffer; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1105:147: error: ‘void __glewRenderbufferStorageMultisample(GLenum, GLsizei, GLenum, GLsizei, GLsizei)’ redeclared as different kind of entity 1105 | GL_APICALL void GL_APIENTRY glRenderbufferStorageMultisample (GLenum target, GLsizei samples, GLenum internalformat, GLsizei width, GLsizei height); | ^ /usr/include/GL/glew.h:22915:57: note: previous declaration ‘void (* __glewRenderbufferStorageMultisample)(GLenum, GLsizei, GLenum, GLsizei, GLsizei)’ 22915 | GLEW_FUN_EXPORT PFNGLRENDERBUFFERSTORAGEMULTISAMPLEPROC __glewRenderbufferStorageMultisample; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1106:130: error: ‘void __glewFramebufferTextureLayer(GLenum, GLenum, GLuint, GLint, GLint)’ redeclared as different kind of entity 1106 | GL_APICALL void GL_APIENTRY glFramebufferTextureLayer (GLenum target, GLenum attachment, GLuint texture, GLint level, GLint layer); | ^ /usr/include/GL/glew.h:22906:50: note: previous declaration ‘void (* __glewFramebufferTextureLayer)(GLenum, GLenum, GLuint, GLint, GLint)’ 22906 | GLEW_FUN_EXPORT PFNGLFRAMEBUFFERTEXTURELAYERPROC __glewFramebufferTextureLayer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1107:116: error: ‘void* __glewMapBufferRange(GLenum, GLintptr, GLsizeiptr, GLbitfield)’ redeclared as different kind of entity 1107 | GL_APICALL void *GL_APIENTRY glMapBufferRange (GLenum target, GLintptr offset, GLsizeiptr length, GLbitfield access); | ^ /usr/include/GL/glew.h:23039:41: note: previous declaration ‘void* (* __glewMapBufferRange)(GLenum, GLintptr, GLsizeiptr, GLbitfield)’ 23039 | GLEW_FUN_EXPORT PFNGLMAPBUFFERRANGEPROC __glewMapBufferRange; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1108:104: error: ‘void __glewFlushMappedBufferRange(GLenum, GLintptr, GLsizeiptr)’ redeclared as different kind of entity 1108 | GL_APICALL void GL_APIENTRY glFlushMappedBufferRange (GLenum target, GLintptr offset, GLsizeiptr length); | ^ /usr/include/GL/glew.h:23038:49: note: previous declaration ‘void (* __glewFlushMappedBufferRange)(GLenum, GLintptr, GLsizeiptr)’ 23038 | GLEW_FUN_EXPORT PFNGLFLUSHMAPPEDBUFFERRANGEPROC __glewFlushMappedBufferRange; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1109:60: error: ‘void __glewBindVertexArray(GLuint)’ redeclared as different kind of entity 1109 | GL_APICALL void GL_APIENTRY glBindVertexArray (GLuint array); | ^ /usr/include/GL/glew.h:23366:42: note: previous declaration ‘void (* __glewBindVertexArray)(GLuint)’ 23366 | GLEW_FUN_EXPORT PFNGLBINDVERTEXARRAYPROC __glewBindVertexArray; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1110:82: error: ‘void __glewDeleteVertexArrays(GLsizei, const GLuint*)’ redeclared as different kind of entity 1110 | GL_APICALL void GL_APIENTRY glDeleteVertexArrays (GLsizei n, const GLuint *arrays); | ^ /usr/include/GL/glew.h:23367:45: note: previous declaration ‘void (* __glewDeleteVertexArrays)(GLsizei, const GLuint*)’ 23367 | GLEW_FUN_EXPORT PFNGLDELETEVERTEXARRAYSPROC __glewDeleteVertexArrays; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1111:73: error: ‘void __glewGenVertexArrays(GLsizei, GLuint*)’ redeclared as different kind of entity 1111 | GL_APICALL void GL_APIENTRY glGenVertexArrays (GLsizei n, GLuint *arrays); | ^ /usr/include/GL/glew.h:23368:42: note: previous declaration ‘void (* __glewGenVertexArrays)(GLsizei, GLuint*)’ 23368 | GLEW_FUN_EXPORT PFNGLGENVERTEXARRAYSPROC __glewGenVertexArrays; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1112:63: error: ‘GLboolean __glewIsVertexArray(GLuint)’ redeclared as different kind of entity 1112 | GL_APICALL GLboolean GL_APIENTRY glIsVertexArray (GLuint array); | ^ /usr/include/GL/glew.h:23369:40: note: previous declaration ‘GLboolean (* __glewIsVertexArray)(GLuint)’ 23369 | GLEW_FUN_EXPORT PFNGLISVERTEXARRAYPROC __glewIsVertexArray; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1113:86: error: ‘void __glewGetIntegeri_v(GLenum, GLuint, GLint*)’ redeclared as different kind of entity 1113 | GL_APICALL void GL_APIENTRY glGetIntegeri_v (GLenum target, GLuint index, GLint *data); | ^ /usr/include/GL/glew.h:23361:40: note: previous declaration ‘void (* __glewGetIntegeri_v)(GLenum, GLuint, GLint*)’ 23361 | GLEW_FUN_EXPORT PFNGLGETINTEGERI_VPROC __glewGetIntegeri_v; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1114:75: error: ‘void __glewBeginTransformFeedback(GLenum)’ redeclared as different kind of entity 1114 | GL_APICALL void GL_APIENTRY glBeginTransformFeedback (GLenum primitiveMode); | ^ /usr/include/GL/glew.h:22503:49: note: previous declaration ‘void (* __glewBeginTransformFeedback)(GLenum)’ 22503 | GLEW_FUN_EXPORT PFNGLBEGINTRANSFORMFEEDBACKPROC __glewBeginTransformFeedback; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1115:57: error: ‘void __glewEndTransformFeedback()’ redeclared as different kind of entity 1115 | GL_APICALL void GL_APIENTRY glEndTransformFeedback (void); | ^ /usr/include/GL/glew.h:22514:47: note: previous declaration ‘void (* __glewEndTransformFeedback)()’ 22514 | GLEW_FUN_EXPORT PFNGLENDTRANSFORMFEEDBACKPROC __glewEndTransformFeedback; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1116:124: error: ‘void __glewBindBufferRange(GLenum, GLuint, GLuint, GLintptr, GLsizeiptr)’ redeclared as different kind of entity 1116 | GL_APICALL void GL_APIENTRY glBindBufferRange (GLenum target, GLuint index, GLuint buffer, GLintptr offset, GLsizeiptr size); | ^ /usr/include/GL/glew.h:23356:42: note: previous declaration ‘void (* __glewBindBufferRange)(GLenum, GLuint, GLuint, GLintptr, GLsizeiptr)’ 23356 | GLEW_FUN_EXPORT PFNGLBINDBUFFERRANGEPROC __glewBindBufferRange; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1117:89: error: ‘void __glewBindBufferBase(GLenum, GLuint, GLuint)’ redeclared as different kind of entity 1117 | GL_APICALL void GL_APIENTRY glBindBufferBase (GLenum target, GLuint index, GLuint buffer); | ^ /usr/include/GL/glew.h:23355:41: note: previous declaration ‘void (* __glewBindBufferBase)(GLenum, GLuint, GLuint)’ 23355 | GLEW_FUN_EXPORT PFNGLBINDBUFFERBASEPROC __glewBindBufferBase; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1118:136: error: ‘void __glewTransformFeedbackVaryings(GLuint, GLsizei, const GLchar* const*, GLenum)’ redeclared as different kind of entity 1118 | GL_APICALL void GL_APIENTRY glTransformFeedbackVaryings (GLuint program, GLsizei count, const GLchar *const*varyings, GLenum bufferMode); | ^ /usr/include/GL/glew.h:22527:52: note: previous declaration ‘void (* __glewTransformFeedbackVaryings)(GLuint, GLsizei, const GLchar* const*, GLenum)’ 22527 | GLEW_FUN_EXPORT PFNGLTRANSFORMFEEDBACKVARYINGSPROC __glewTransformFeedbackVaryings; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1119:165: error: ‘void __glewGetTransformFeedbackVarying(GLuint, GLuint, GLsizei, GLsizei*, GLsizei*, GLenum*, GLchar*)’ redeclared as different kind of entity 1119 | GL_APICALL void GL_APIENTRY glGetTransformFeedbackVarying (GLuint program, GLuint index, GLsizei bufSize, GLsizei *length, GLsizei *size, GLenum *type, GLchar *name); | ^ /usr/include/GL/glew.h:22520:54: note: previous declaration ‘void (* __glewGetTransformFeedbackVarying)(GLuint, GLuint, GLsizei, GLsizei*, GLsizei*, GLenum*, GLchar*)’ 22520 | GLEW_FUN_EXPORT PFNGLGETTRANSFORMFEEDBACKVARYINGPROC __glewGetTransformFeedbackVarying; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1120:127: error: ‘void __glewVertexAttribIPointer(GLuint, GLint, GLenum, GLsizei, const void*)’ redeclared as different kind of entity 1120 | GL_APICALL void GL_APIENTRY glVertexAttribIPointer (GLuint index, GLint size, GLenum type, GLsizei stride, const void *pointer); | ^ /usr/include/GL/glew.h:22556:47: note: previous declaration ‘void (* __glewVertexAttribIPointer)(GLuint, GLint, GLenum, GLsizei, const void*)’ 22556 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBIPOINTERPROC __glewVertexAttribIPointer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1121:92: error: ‘void __glewGetVertexAttribIiv(GLuint, GLenum, GLint*)’ redeclared as different kind of entity 1121 | GL_APICALL void GL_APIENTRY glGetVertexAttribIiv (GLuint index, GLenum pname, GLint *params); | ^ /usr/include/GL/glew.h:22522:45: note: previous declaration ‘void (* __glewGetVertexAttribIiv)(GLuint, GLenum, GLint*)’ 22522 | GLEW_FUN_EXPORT PFNGLGETVERTEXATTRIBIIVPROC __glewGetVertexAttribIiv; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1122:94: error: ‘void __glewGetVertexAttribIuiv(GLuint, GLenum, GLuint*)’ redeclared as different kind of entity 1122 | GL_APICALL void GL_APIENTRY glGetVertexAttribIuiv (GLuint index, GLenum pname, GLuint *params); | ^ /usr/include/GL/glew.h:22523:46: note: previous declaration ‘void (* __glewGetVertexAttribIuiv)(GLuint, GLenum, GLuint*)’ 22523 | GLEW_FUN_EXPORT PFNGLGETVERTEXATTRIBIUIVPROC __glewGetVertexAttribIuiv; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1123:96: error: ‘void __glewVertexAttribI4i(GLuint, GLint, GLint, GLint, GLint)’ redeclared as different kind of entity 1123 | GL_APICALL void GL_APIENTRY glVertexAttribI4i (GLuint index, GLint x, GLint y, GLint z, GLint w); | ^ /usr/include/GL/glew.h:22549:42: note: previous declaration ‘void (* __glewVertexAttribI4i)(GLuint, GLint, GLint, GLint, GLint)’ 22549 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBI4IPROC __glewVertexAttribI4i; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1124:101: error: ‘void __glewVertexAttribI4ui(GLuint, GLuint, GLuint, GLuint, GLuint)’ redeclared as different kind of entity 1124 | GL_APICALL void GL_APIENTRY glVertexAttribI4ui (GLuint index, GLuint x, GLuint y, GLuint z, GLuint w); | ^ /usr/include/GL/glew.h:22553:43: note: previous declaration ‘void (* __glewVertexAttribI4ui)(GLuint, GLuint, GLuint, GLuint, GLuint)’ 22553 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBI4UIPROC __glewVertexAttribI4ui; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1125:77: error: ‘void __glewVertexAttribI4iv(GLuint, const GLint*)’ redeclared as different kind of entity 1125 | GL_APICALL void GL_APIENTRY glVertexAttribI4iv (GLuint index, const GLint *v); | ^ /usr/include/GL/glew.h:22550:43: note: previous declaration ‘void (* __glewVertexAttribI4iv)(GLuint, const GLint*)’ 22550 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBI4IVPROC __glewVertexAttribI4iv; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1126:79: error: ‘void __glewVertexAttribI4uiv(GLuint, const GLuint*)’ redeclared as different kind of entity 1126 | GL_APICALL void GL_APIENTRY glVertexAttribI4uiv (GLuint index, const GLuint *v); | ^ /usr/include/GL/glew.h:22554:44: note: previous declaration ‘void (* __glewVertexAttribI4uiv)(GLuint, const GLuint*)’ 22554 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBI4UIVPROC __glewVertexAttribI4uiv; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1127:92: error: ‘void __glewGetUniformuiv(GLuint, GLint, GLuint*)’ redeclared as different kind of entity 1127 | GL_APICALL void GL_APIENTRY glGetUniformuiv (GLuint program, GLint location, GLuint *params); | ^ /usr/include/GL/glew.h:22521:40: note: previous declaration ‘void (* __glewGetUniformuiv)(GLuint, GLint, GLuint*)’ 22521 | GLEW_FUN_EXPORT PFNGLGETUNIFORMUIVPROC __glewGetUniformuiv; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1128:87: error: ‘GLint __glewGetFragDataLocation(GLuint, const GLchar*)’ redeclared as different kind of entity 1128 | GL_APICALL GLint GL_APIENTRY glGetFragDataLocation (GLuint program, const GLchar *name); | ^ /usr/include/GL/glew.h:22516:46: note: previous declaration ‘GLint (* __glewGetFragDataLocation)(GLuint, const GLchar*)’ 22516 | GLEW_FUN_EXPORT PFNGLGETFRAGDATALOCATIONPROC __glewGetFragDataLocation; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1129:68: error: ‘void __glewUniform1ui(GLint, GLuint)’ redeclared as different kind of entity 1129 | GL_APICALL void GL_APIENTRY glUniform1ui (GLint location, GLuint v0); | ^ /usr/include/GL/glew.h:22528:37: note: previous declaration ‘void (* __glewUniform1ui)(GLint, GLuint)’ 22528 | GLEW_FUN_EXPORT PFNGLUNIFORM1UIPROC __glewUniform1ui; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1130:79: error: ‘void __glewUniform2ui(GLint, GLuint, GLuint)’ redeclared as different kind of entity 1130 | GL_APICALL void GL_APIENTRY glUniform2ui (GLint location, GLuint v0, GLuint v1); | ^ /usr/include/GL/glew.h:22530:37: note: previous declaration ‘void (* __glewUniform2ui)(GLint, GLuint, GLuint)’ 22530 | GLEW_FUN_EXPORT PFNGLUNIFORM2UIPROC __glewUniform2ui; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1131:90: error: ‘void __glewUniform3ui(GLint, GLuint, GLuint, GLuint)’ redeclared as different kind of entity 1131 | GL_APICALL void GL_APIENTRY glUniform3ui (GLint location, GLuint v0, GLuint v1, GLuint v2); | ^ /usr/include/GL/glew.h:22532:37: note: previous declaration ‘void (* __glewUniform3ui)(GLint, GLuint, GLuint, GLuint)’ 22532 | GLEW_FUN_EXPORT PFNGLUNIFORM3UIPROC __glewUniform3ui; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1132:101: error: ‘void __glewUniform4ui(GLint, GLuint, GLuint, GLuint, GLuint)’ redeclared as different kind of entity 1132 | GL_APICALL void GL_APIENTRY glUniform4ui (GLint location, GLuint v0, GLuint v1, GLuint v2, GLuint v3); | ^ /usr/include/GL/glew.h:22534:37: note: previous declaration ‘void (* __glewUniform4ui)(GLint, GLuint, GLuint, GLuint, GLuint)’ 22534 | GLEW_FUN_EXPORT PFNGLUNIFORM4UIPROC __glewUniform4ui; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1133:94: error: ‘void __glewUniform1uiv(GLint, GLsizei, const GLuint*)’ redeclared as different kind of entity 1133 | GL_APICALL void GL_APIENTRY glUniform1uiv (GLint location, GLsizei count, const GLuint *value); | ^ /usr/include/GL/glew.h:22529:38: note: previous declaration ‘void (* __glewUniform1uiv)(GLint, GLsizei, const GLuint*)’ 22529 | GLEW_FUN_EXPORT PFNGLUNIFORM1UIVPROC __glewUniform1uiv; | ^~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1134:94: error: ‘void __glewUniform2uiv(GLint, GLsizei, const GLuint*)’ redeclared as different kind of entity 1134 | GL_APICALL void GL_APIENTRY glUniform2uiv (GLint location, GLsizei count, const GLuint *value); | ^ /usr/include/GL/glew.h:22531:38: note: previous declaration ‘void (* __glewUniform2uiv)(GLint, GLsizei, const GLuint*)’ 22531 | GLEW_FUN_EXPORT PFNGLUNIFORM2UIVPROC __glewUniform2uiv; | ^~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1135:94: error: ‘void __glewUniform3uiv(GLint, GLsizei, const GLuint*)’ redeclared as different kind of entity 1135 | GL_APICALL void GL_APIENTRY glUniform3uiv (GLint location, GLsizei count, const GLuint *value); | ^ /usr/include/GL/glew.h:22533:38: note: previous declaration ‘void (* __glewUniform3uiv)(GLint, GLsizei, const GLuint*)’ 22533 | GLEW_FUN_EXPORT PFNGLUNIFORM3UIVPROC __glewUniform3uiv; | ^~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1136:94: error: ‘void __glewUniform4uiv(GLint, GLsizei, const GLuint*)’ redeclared as different kind of entity 1136 | GL_APICALL void GL_APIENTRY glUniform4uiv (GLint location, GLsizei count, const GLuint *value); | ^ /usr/include/GL/glew.h:22535:38: note: previous declaration ‘void (* __glewUniform4uiv)(GLint, GLsizei, const GLuint*)’ 22535 | GLEW_FUN_EXPORT PFNGLUNIFORM4UIVPROC __glewUniform4uiv; | ^~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1137:97: error: ‘void __glewClearBufferiv(GLenum, GLint, const GLint*)’ redeclared as different kind of entity 1137 | GL_APICALL void GL_APIENTRY glClearBufferiv (GLenum buffer, GLint drawbuffer, const GLint *value); | ^ /usr/include/GL/glew.h:22508:40: note: previous declaration ‘void (* __glewClearBufferiv)(GLenum, GLint, const GLint*)’ 22508 | GLEW_FUN_EXPORT PFNGLCLEARBUFFERIVPROC __glewClearBufferiv; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1138:99: error: ‘void __glewClearBufferuiv(GLenum, GLint, const GLuint*)’ redeclared as different kind of entity 1138 | GL_APICALL void GL_APIENTRY glClearBufferuiv (GLenum buffer, GLint drawbuffer, const GLuint *value); | ^ /usr/include/GL/glew.h:22509:41: note: previous declaration ‘void (* __glewClearBufferuiv)(GLenum, GLint, const GLuint*)’ 22509 | GLEW_FUN_EXPORT PFNGLCLEARBUFFERUIVPROC __glewClearBufferuiv; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1139:99: error: ‘void __glewClearBufferfv(GLenum, GLint, const GLfloat*)’ redeclared as different kind of entity 1139 | GL_APICALL void GL_APIENTRY glClearBufferfv (GLenum buffer, GLint drawbuffer, const GLfloat *value); | ^ /usr/include/GL/glew.h:22507:40: note: previous declaration ‘void (* __glewClearBufferfv)(GLenum, GLint, const GLfloat*)’ 22507 | GLEW_FUN_EXPORT PFNGLCLEARBUFFERFVPROC __glewClearBufferfv; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1140:107: error: ‘void __glewClearBufferfi(GLenum, GLint, GLfloat, GLint)’ redeclared as different kind of entity 1140 | GL_APICALL void GL_APIENTRY glClearBufferfi (GLenum buffer, GLint drawbuffer, GLfloat depth, GLint stencil); | ^ /usr/include/GL/glew.h:22506:40: note: previous declaration ‘void (* __glewClearBufferfi)(GLenum, GLint, GLfloat, GLint)’ 22506 | GLEW_FUN_EXPORT PFNGLCLEARBUFFERFIPROC __glewClearBufferfi; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1141:78: error: ‘const GLubyte* __glewGetStringi(GLenum, GLuint)’ redeclared as different kind of entity 1141 | GL_APICALL const GLubyte *GL_APIENTRY glGetStringi (GLenum name, GLuint index); | ^ /usr/include/GL/glew.h:22517:37: note: previous declaration ‘const GLubyte* (* __glewGetStringi)(GLenum, GLuint)’ 22517 | GLEW_FUN_EXPORT PFNGLGETSTRINGIPROC __glewGetStringi; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1142:147: error: ‘void __glewCopyBufferSubData(GLenum, GLenum, GLintptr, GLintptr, GLsizeiptr)’ redeclared as different kind of entity 1142 | GL_APICALL void GL_APIENTRY glCopyBufferSubData (GLenum readTarget, GLenum writeTarget, GLintptr readOffset, GLintptr writeOffset, GLsizeiptr size); | ^ /usr/include/GL/glew.h:22769:44: note: previous declaration ‘void (* __glewCopyBufferSubData)(GLenum, GLenum, GLintptr, GLintptr, GLsizeiptr)’ 22769 | GLEW_FUN_EXPORT PFNGLCOPYBUFFERSUBDATAPROC __glewCopyBufferSubData; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1143:144: error: ‘void __glewGetUniformIndices(GLuint, GLsizei, const GLchar* const*, GLuint*)’ redeclared as different kind of entity 1143 | GL_APICALL void GL_APIENTRY glGetUniformIndices (GLuint program, GLsizei uniformCount, const GLchar *const*uniformNames, GLuint *uniformIndices); | ^ /usr/include/GL/glew.h:23363:44: note: previous declaration ‘void (* __glewGetUniformIndices)(GLuint, GLsizei, const GLchar* const*, GLuint*)’ 23363 | GLEW_FUN_EXPORT PFNGLGETUNIFORMINDICESPROC __glewGetUniformIndices; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1144:147: error: ‘void __glewGetActiveUniformsiv(GLuint, GLsizei, const GLuint*, GLenum, GLint*)’ redeclared as different kind of entity 1144 | GL_APICALL void GL_APIENTRY glGetActiveUniformsiv (GLuint program, GLsizei uniformCount, const GLuint *uniformIndices, GLenum pname, GLint *params); | ^ /usr/include/GL/glew.h:23360:46: note: previous declaration ‘void (* __glewGetActiveUniformsiv)(GLuint, GLsizei, const GLuint*, GLenum, GLint*)’ 23360 | GLEW_FUN_EXPORT PFNGLGETACTIVEUNIFORMSIVPROC __glewGetActiveUniformsiv; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1145:101: error: ‘GLuint __glewGetUniformBlockIndex(GLuint, const GLchar*)’ redeclared as different kind of entity 1145 | GL_APICALL GLuint GL_APIENTRY glGetUniformBlockIndex (GLuint program, const GLchar *uniformBlockName); | ^ /usr/include/GL/glew.h:23362:47: note: previous declaration ‘GLuint (* __glewGetUniformBlockIndex)(GLuint, const GLchar*)’ 23362 | GLEW_FUN_EXPORT PFNGLGETUNIFORMBLOCKINDEXPROC __glewGetUniformBlockIndex; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1146:125: error: ‘void __glewGetActiveUniformBlockiv(GLuint, GLuint, GLenum, GLint*)’ redeclared as different kind of entity 1146 | GL_APICALL void GL_APIENTRY glGetActiveUniformBlockiv (GLuint program, GLuint uniformBlockIndex, GLenum pname, GLint *params); | ^ /usr/include/GL/glew.h:23358:50: note: previous declaration ‘void (* __glewGetActiveUniformBlockiv)(GLuint, GLuint, GLenum, GLint*)’ 23358 | GLEW_FUN_EXPORT PFNGLGETACTIVEUNIFORMBLOCKIVPROC __glewGetActiveUniformBlockiv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1147:158: error: ‘void __glewGetActiveUniformBlockName(GLuint, GLuint, GLsizei, GLsizei*, GLchar*)’ redeclared as different kind of entity 1147 | GL_APICALL void GL_APIENTRY glGetActiveUniformBlockName (GLuint program, GLuint uniformBlockIndex, GLsizei bufSize, GLsizei *length, GLchar *uniformBlockName); | ^ /usr/include/GL/glew.h:23357:52: note: previous declaration ‘void (* __glewGetActiveUniformBlockName)(GLuint, GLuint, GLsizei, GLsizei*, GLchar*)’ 23357 | GLEW_FUN_EXPORT PFNGLGETACTIVEUNIFORMBLOCKNAMEPROC __glewGetActiveUniformBlockName; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1148:120: error: ‘void __glewUniformBlockBinding(GLuint, GLuint, GLuint)’ redeclared as different kind of entity 1148 | GL_APICALL void GL_APIENTRY glUniformBlockBinding (GLuint program, GLuint uniformBlockIndex, GLuint uniformBlockBinding); | ^ /usr/include/GL/glew.h:23364:46: note: previous declaration ‘void (* __glewUniformBlockBinding)(GLuint, GLuint, GLuint)’ 23364 | GLEW_FUN_EXPORT PFNGLUNIFORMBLOCKBINDINGPROC __glewUniformBlockBinding; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1149:114: error: ‘void __glewDrawArraysInstanced(GLenum, GLint, GLsizei, GLsizei)’ redeclared as different kind of entity 1149 | GL_APICALL void GL_APIENTRY glDrawArraysInstanced (GLenum mode, GLint first, GLsizei count, GLsizei instancecount); | ^ /usr/include/GL/glew.h:22558:46: note: previous declaration ‘void (* __glewDrawArraysInstanced)(GLenum, GLint, GLsizei, GLsizei)’ 22558 | GLEW_FUN_EXPORT PFNGLDRAWARRAYSINSTANCEDPROC __glewDrawArraysInstanced; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1150:137: error: ‘void __glewDrawElementsInstanced(GLenum, GLsizei, GLenum, const void*, GLsizei)’ redeclared as different kind of entity 1150 | GL_APICALL void GL_APIENTRY glDrawElementsInstanced (GLenum mode, GLsizei count, GLenum type, const void *indices, GLsizei instancecount); | ^ /usr/include/GL/glew.h:22559:48: note: previous declaration ‘void (* __glewDrawElementsInstanced)(GLenum, GLsizei, GLenum, const void*, GLsizei)’ 22559 | GLEW_FUN_EXPORT PFNGLDRAWELEMENTSINSTANCEDPROC __glewDrawElementsInstanced; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1151:78: error: ‘__GLsync* __glewFenceSync(GLenum, GLbitfield)’ redeclared as different kind of entity 1151 | GL_APICALL GLsync GL_APIENTRY glFenceSync (GLenum condition, GLbitfield flags); | ^ /usr/include/GL/glew.h:23290:36: note: previous declaration ‘__GLsync* (* __glewFenceSync)(GLenum, GLbitfield)’ 23290 | GLEW_FUN_EXPORT PFNGLFENCESYNCPROC __glewFenceSync; | ^~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1152:55: error: ‘GLboolean __glewIsSync(GLsync)’ redeclared as different kind of entity 1152 | GL_APICALL GLboolean GL_APIENTRY glIsSync (GLsync sync); | ^ /usr/include/GL/glew.h:23293:33: note: previous declaration ‘GLboolean (* __glewIsSync)(GLsync)’ 23293 | GLEW_FUN_EXPORT PFNGLISSYNCPROC __glewIsSync; | ^~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1153:54: error: ‘void __glewDeleteSync(GLsync)’ redeclared as different kind of entity 1153 | GL_APICALL void GL_APIENTRY glDeleteSync (GLsync sync); | ^ /usr/include/GL/glew.h:23289:37: note: previous declaration ‘void (* __glewDeleteSync)(GLsync)’ 23289 | GLEW_FUN_EXPORT PFNGLDELETESYNCPROC __glewDeleteSync; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1154:96: error: ‘GLenum __glewClientWaitSync(GLsync, GLbitfield, GLuint64)’ redeclared as different kind of entity 1154 | GL_APICALL GLenum GL_APIENTRY glClientWaitSync (GLsync sync, GLbitfield flags, GLuint64 timeout); | ^ /usr/include/GL/glew.h:23288:41: note: previous declaration ‘GLenum (* __glewClientWaitSync)(GLsync, GLbitfield, GLuint64)’ 23288 | GLEW_FUN_EXPORT PFNGLCLIENTWAITSYNCPROC __glewClientWaitSync; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1155:88: error: ‘void __glewWaitSync(GLsync, GLbitfield, GLuint64)’ redeclared as different kind of entity 1155 | GL_APICALL void GL_APIENTRY glWaitSync (GLsync sync, GLbitfield flags, GLuint64 timeout); | ^ /usr/include/GL/glew.h:23294:35: note: previous declaration ‘void (* __glewWaitSync)(GLsync, GLbitfield, GLuint64)’ 23294 | GLEW_FUN_EXPORT PFNGLWAITSYNCPROC __glewWaitSync; | ^~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1156:73: error: ‘void __glewGetInteger64v(GLenum, GLint64*)’ redeclared as different kind of entity 1156 | GL_APICALL void GL_APIENTRY glGetInteger64v (GLenum pname, GLint64 *data); | ^ /usr/include/GL/glew.h:23291:40: note: previous declaration ‘void (* __glewGetInteger64v)(GLenum, GLint64*)’ 23291 | GLEW_FUN_EXPORT PFNGLGETINTEGER64VPROC __glewGetInteger64v; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1157:116: error: ‘void __glewGetSynciv(GLsync, GLenum, GLsizei, GLsizei*, GLint*)’ redeclared as different kind of entity 1157 | GL_APICALL void GL_APIENTRY glGetSynciv (GLsync sync, GLenum pname, GLsizei bufSize, GLsizei *length, GLint *values); | ^ /usr/include/GL/glew.h:23292:36: note: previous declaration ‘void (* __glewGetSynciv)(GLsync, GLenum, GLsizei, GLsizei*, GLint*)’ 23292 | GLEW_FUN_EXPORT PFNGLGETSYNCIVPROC __glewGetSynciv; | ^~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1158:90: error: ‘void __glewGetInteger64i_v(GLenum, GLuint, GLint64*)’ redeclared as different kind of entity 1158 | GL_APICALL void GL_APIENTRY glGetInteger64i_v (GLenum target, GLuint index, GLint64 *data); | ^ /usr/include/GL/glew.h:22565:42: note: previous declaration ‘void (* __glewGetInteger64i_v)(GLenum, GLuint, GLint64*)’ 22565 | GLEW_FUN_EXPORT PFNGLGETINTEGER64I_VPROC __glewGetInteger64i_v; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1159:99: error: ‘void __glewGetBufferParameteri64v(GLenum, GLenum, GLint64*)’ redeclared as different kind of entity 1159 | GL_APICALL void GL_APIENTRY glGetBufferParameteri64v (GLenum target, GLenum pname, GLint64 *params); | ^ /usr/include/GL/glew.h:22564:49: note: previous declaration ‘void (* __glewGetBufferParameteri64v)(GLenum, GLenum, GLint64*)’ 22564 | GLEW_FUN_EXPORT PFNGLGETBUFFERPARAMETERI64VPROC __glewGetBufferParameteri64v; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1160:75: error: ‘void __glewGenSamplers(GLsizei, GLuint*)’ redeclared as different kind of entity 1160 | GL_APICALL void GL_APIENTRY glGenSamplers (GLsizei count, GLuint *samplers); | ^ /usr/include/GL/glew.h:23147:38: note: previous declaration ‘void (* __glewGenSamplers)(GLsizei, GLuint*)’ 23147 | GLEW_FUN_EXPORT PFNGLGENSAMPLERSPROC __glewGenSamplers; | ^~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1161:84: error: ‘void __glewDeleteSamplers(GLsizei, const GLuint*)’ redeclared as different kind of entity 1161 | GL_APICALL void GL_APIENTRY glDeleteSamplers (GLsizei count, const GLuint *samplers); | ^ /usr/include/GL/glew.h:23146:41: note: previous declaration ‘void (* __glewDeleteSamplers)(GLsizei, const GLuint*)’ 23146 | GLEW_FUN_EXPORT PFNGLDELETESAMPLERSPROC __glewDeleteSamplers; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1162:61: error: ‘GLboolean __glewIsSampler(GLuint)’ redeclared as different kind of entity 1162 | GL_APICALL GLboolean GL_APIENTRY glIsSampler (GLuint sampler); | ^ /usr/include/GL/glew.h:23152:36: note: previous declaration ‘GLboolean (* __glewIsSampler)(GLuint)’ 23152 | GLEW_FUN_EXPORT PFNGLISSAMPLERPROC __glewIsSampler; | ^~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1163:71: error: ‘void __glewBindSampler(GLuint, GLuint)’ redeclared as different kind of entity 1163 | GL_APICALL void GL_APIENTRY glBindSampler (GLuint unit, GLuint sampler); | ^ /usr/include/GL/glew.h:23145:38: note: previous declaration ‘void (* __glewBindSampler)(GLuint, GLuint)’ 23145 | GLEW_FUN_EXPORT PFNGLBINDSAMPLERPROC __glewBindSampler; | ^~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1164:91: error: ‘void __glewSamplerParameteri(GLuint, GLenum, GLint)’ redeclared as different kind of entity 1164 | GL_APICALL void GL_APIENTRY glSamplerParameteri (GLuint sampler, GLenum pname, GLint param); | ^ /usr/include/GL/glew.h:23157:44: note: previous declaration ‘void (* __glewSamplerParameteri)(GLuint, GLenum, GLint)’ 23157 | GLEW_FUN_EXPORT PFNGLSAMPLERPARAMETERIPROC __glewSamplerParameteri; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1165:99: error: ‘void __glewSamplerParameteriv(GLuint, GLenum, const GLint*)’ redeclared as different kind of entity 1165 | GL_APICALL void GL_APIENTRY glSamplerParameteriv (GLuint sampler, GLenum pname, const GLint *param); | ^ /usr/include/GL/glew.h:23158:45: note: previous declaration ‘void (* __glewSamplerParameteriv)(GLuint, GLenum, const GLint*)’ 23158 | GLEW_FUN_EXPORT PFNGLSAMPLERPARAMETERIVPROC __glewSamplerParameteriv; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1166:93: error: ‘void __glewSamplerParameterf(GLuint, GLenum, GLfloat)’ redeclared as different kind of entity 1166 | GL_APICALL void GL_APIENTRY glSamplerParameterf (GLuint sampler, GLenum pname, GLfloat param); | ^ /usr/include/GL/glew.h:23155:44: note: previous declaration ‘void (* __glewSamplerParameterf)(GLuint, GLenum, GLfloat)’ 23155 | GLEW_FUN_EXPORT PFNGLSAMPLERPARAMETERFPROC __glewSamplerParameterf; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1167:101: error: ‘void __glewSamplerParameterfv(GLuint, GLenum, const GLfloat*)’ redeclared as different kind of entity 1167 | GL_APICALL void GL_APIENTRY glSamplerParameterfv (GLuint sampler, GLenum pname, const GLfloat *param); | ^ /usr/include/GL/glew.h:23156:45: note: previous declaration ‘void (* __glewSamplerParameterfv)(GLuint, GLenum, const GLfloat*)’ 23156 | GLEW_FUN_EXPORT PFNGLSAMPLERPARAMETERFVPROC __glewSamplerParameterfv; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1168:97: error: ‘void __glewGetSamplerParameteriv(GLuint, GLenum, GLint*)’ redeclared as different kind of entity 1168 | GL_APICALL void GL_APIENTRY glGetSamplerParameteriv (GLuint sampler, GLenum pname, GLint *params); | ^ /usr/include/GL/glew.h:23151:48: note: previous declaration ‘void (* __glewGetSamplerParameteriv)(GLuint, GLenum, GLint*)’ 23151 | GLEW_FUN_EXPORT PFNGLGETSAMPLERPARAMETERIVPROC __glewGetSamplerParameteriv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1169:99: error: ‘void __glewGetSamplerParameterfv(GLuint, GLenum, GLfloat*)’ redeclared as different kind of entity 1169 | GL_APICALL void GL_APIENTRY glGetSamplerParameterfv (GLuint sampler, GLenum pname, GLfloat *params); | ^ /usr/include/GL/glew.h:23150:48: note: previous declaration ‘void (* __glewGetSamplerParameterfv)(GLuint, GLenum, GLfloat*)’ 23150 | GLEW_FUN_EXPORT PFNGLGETSAMPLERPARAMETERFVPROC __glewGetSamplerParameterfv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1170:80: error: ‘void __glewVertexAttribDivisor(GLuint, GLuint)’ redeclared as different kind of entity 1170 | GL_APICALL void GL_APIENTRY glVertexAttribDivisor (GLuint index, GLuint divisor); | ^ /usr/include/GL/glew.h:22567:46: note: previous declaration ‘void (* __glewVertexAttribDivisor)(GLuint, GLuint)’ 22567 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBDIVISORPROC __glewVertexAttribDivisor; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1171:78: error: ‘void __glewBindTransformFeedback(GLenum, GLuint)’ redeclared as different kind of entity 1171 | GL_APICALL void GL_APIENTRY glBindTransformFeedback (GLenum target, GLuint id); | ^ /usr/include/GL/glew.h:23334:48: note: previous declaration ‘void (* __glewBindTransformFeedback)(GLenum, GLuint)’ 23334 | GLEW_FUN_EXPORT PFNGLBINDTRANSFORMFEEDBACKPROC __glewBindTransformFeedback; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1172:85: error: ‘void __glewDeleteTransformFeedbacks(GLsizei, const GLuint*)’ redeclared as different kind of entity 1172 | GL_APICALL void GL_APIENTRY glDeleteTransformFeedbacks (GLsizei n, const GLuint *ids); | ^ /usr/include/GL/glew.h:23335:51: note: previous declaration ‘void (* __glewDeleteTransformFeedbacks)(GLsizei, const GLuint*)’ 23335 | GLEW_FUN_EXPORT PFNGLDELETETRANSFORMFEEDBACKSPROC __glewDeleteTransformFeedbacks; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1173:76: error: ‘void __glewGenTransformFeedbacks(GLsizei, GLuint*)’ redeclared as different kind of entity 1173 | GL_APICALL void GL_APIENTRY glGenTransformFeedbacks (GLsizei n, GLuint *ids); | ^ /usr/include/GL/glew.h:23337:48: note: previous declaration ‘void (* __glewGenTransformFeedbacks)(GLsizei, GLuint*)’ 23337 | GLEW_FUN_EXPORT PFNGLGENTRANSFORMFEEDBACKSPROC __glewGenTransformFeedbacks; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1174:66: error: ‘GLboolean __glewIsTransformFeedback(GLuint)’ redeclared as different kind of entity 1174 | GL_APICALL GLboolean GL_APIENTRY glIsTransformFeedback (GLuint id); | ^ /usr/include/GL/glew.h:23338:46: note: previous declaration ‘GLboolean (* __glewIsTransformFeedback)(GLuint)’ 23338 | GLEW_FUN_EXPORT PFNGLISTRANSFORMFEEDBACKPROC __glewIsTransformFeedback; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1175:59: error: ‘void __glewPauseTransformFeedback()’ redeclared as different kind of entity 1175 | GL_APICALL void GL_APIENTRY glPauseTransformFeedback (void); | ^ /usr/include/GL/glew.h:23339:49: note: previous declaration ‘void (* __glewPauseTransformFeedback)()’ 23339 | GLEW_FUN_EXPORT PFNGLPAUSETRANSFORMFEEDBACKPROC __glewPauseTransformFeedback; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1176:60: error: ‘void __glewResumeTransformFeedback()’ redeclared as different kind of entity 1176 | GL_APICALL void GL_APIENTRY glResumeTransformFeedback (void); | ^ /usr/include/GL/glew.h:23340:50: note: previous declaration ‘void (* __glewResumeTransformFeedback)()’ 23340 | GLEW_FUN_EXPORT PFNGLRESUMETRANSFORMFEEDBACKPROC __glewResumeTransformFeedback; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1177:133: error: ‘void __glewGetProgramBinary(GLuint, GLsizei, GLsizei*, GLenum*, void*)’ redeclared as different kind of entity 1177 | GL_APICALL void GL_APIENTRY glGetProgramBinary (GLuint program, GLsizei bufSize, GLsizei *length, GLenum *binaryFormat, void *binary); | ^ /usr/include/GL/glew.h:22922:43: note: previous declaration ‘void (* __glewGetProgramBinary)(GLuint, GLsizei, GLsizei*, GLenum*, void*)’ 22922 | GLEW_FUN_EXPORT PFNGLGETPROGRAMBINARYPROC __glewGetProgramBinary; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1178:117: error: ‘void __glewProgramBinary(GLuint, GLenum, const void*, GLsizei)’ redeclared as different kind of entity 1178 | GL_APICALL void GL_APIENTRY glProgramBinary (GLuint program, GLenum binaryFormat, const void *binary, GLsizei length); | ^ /usr/include/GL/glew.h:22923:40: note: previous declaration ‘void (* __glewProgramBinary)(GLuint, GLenum, const void*, GLsizei)’ 22923 | GLEW_FUN_EXPORT PFNGLPROGRAMBINARYPROC __glewProgramBinary; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1179:91: error: ‘void __glewProgramParameteri(GLuint, GLenum, GLint)’ redeclared as different kind of entity 1179 | GL_APICALL void GL_APIENTRY glProgramParameteri (GLuint program, GLenum pname, GLint value); | ^ /usr/include/GL/glew.h:22924:44: note: previous declaration ‘void (* __glewProgramParameteri)(GLuint, GLenum, GLint)’ 22924 | GLEW_FUN_EXPORT PFNGLPROGRAMPARAMETERIPROC __glewProgramParameteri; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1180:118: error: ‘void __glewInvalidateFramebuffer(GLenum, GLsizei, const GLenum*)’ redeclared as different kind of entity 1180 | GL_APICALL void GL_APIENTRY glInvalidateFramebuffer (GLenum target, GLsizei numAttachments, const GLenum *attachments); | ^ /usr/include/GL/glew.h:23033:48: note: previous declaration ‘void (* __glewInvalidateFramebuffer)(GLenum, GLsizei, const GLenum*)’ 23033 | GLEW_FUN_EXPORT PFNGLINVALIDATEFRAMEBUFFERPROC __glewInvalidateFramebuffer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1181:170: error: ‘void __glewInvalidateSubFramebuffer(GLenum, GLsizei, const GLenum*, GLint, GLint, GLsizei, GLsizei)’ redeclared as different kind of entity 1181 | GL_APICALL void GL_APIENTRY glInvalidateSubFramebuffer (GLenum target, GLsizei numAttachments, const GLenum *attachments, GLint x, GLint y, GLsizei width, GLsizei height); | ^ /usr/include/GL/glew.h:23034:51: note: previous declaration ‘void (* __glewInvalidateSubFramebuffer)(GLenum, GLsizei, const GLenum*, GLint, GLint, GLsizei, GLsizei)’ 23034 | GLEW_FUN_EXPORT PFNGLINVALIDATESUBFRAMEBUFFERPROC __glewInvalidateSubFramebuffer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1182:128: error: ‘void __glewTexStorage2D(GLenum, GLsizei, GLenum, GLsizei, GLsizei)’ redeclared as different kind of entity 1182 | GL_APICALL void GL_APIENTRY glTexStorage2D (GLenum target, GLsizei levels, GLenum internalformat, GLsizei width, GLsizei height); | ^ /usr/include/GL/glew.h:23320:39: note: previous declaration ‘void (* __glewTexStorage2D)(GLenum, GLsizei, GLenum, GLsizei, GLsizei)’ 23320 | GLEW_FUN_EXPORT PFNGLTEXSTORAGE2DPROC __glewTexStorage2D; | ^~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1183:143: error: ‘void __glewTexStorage3D(GLenum, GLsizei, GLenum, GLsizei, GLsizei, GLsizei)’ redeclared as different kind of entity 1183 | GL_APICALL void GL_APIENTRY glTexStorage3D (GLenum target, GLsizei levels, GLenum internalformat, GLsizei width, GLsizei height, GLsizei depth); | ^ /usr/include/GL/glew.h:23321:39: note: previous declaration ‘void (* __glewTexStorage3D)(GLenum, GLsizei, GLenum, GLsizei, GLsizei, GLsizei)’ 23321 | GLEW_FUN_EXPORT PFNGLTEXSTORAGE3DPROC __glewTexStorage3D; | ^~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1184:134: error: ‘void __glewGetInternalformativ(GLenum, GLenum, GLenum, GLsizei, GLint*)’ redeclared as different kind of entity 1184 | GL_APICALL void GL_APIENTRY glGetInternalformativ (GLenum target, GLenum internalformat, GLenum pname, GLsizei bufSize, GLint *params); | ^ /usr/include/GL/glew.h:23027:46: note: previous declaration ‘void (* __glewGetInternalformativ)(GLenum, GLenum, GLenum, GLsizei, GLint*)’ 23027 | GLEW_FUN_EXPORT PFNGLGETINTERNALFORMATIVPROC __glewGetInternalformativ; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1432:109: error: ‘void __glewDispatchCompute(GLuint, GLuint, GLuint)’ redeclared as different kind of entity 1432 | GL_APICALL void GL_APIENTRY glDispatchCompute (GLuint num_groups_x, GLuint num_groups_y, GLuint num_groups_z); | ^ /usr/include/GL/glew.h:22764:42: note: previous declaration ‘void (* __glewDispatchCompute)(GLuint, GLuint, GLuint)’ 22764 | GLEW_FUN_EXPORT PFNGLDISPATCHCOMPUTEPROC __glewDispatchCompute; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1433:73: error: ‘void __glewDispatchComputeIndirect(GLintptr)’ redeclared as different kind of entity 1433 | GL_APICALL void GL_APIENTRY glDispatchComputeIndirect (GLintptr indirect); | ^ /usr/include/GL/glew.h:22765:50: note: previous declaration ‘void (* __glewDispatchComputeIndirect)(GLintptr)’ 22765 | GLEW_FUN_EXPORT PFNGLDISPATCHCOMPUTEINDIRECTPROC __glewDispatchComputeIndirect; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1434:84: error: ‘void __glewDrawArraysIndirect(GLenum, const void*)’ redeclared as different kind of entity 1434 | GL_APICALL void GL_APIENTRY glDrawArraysIndirect (GLenum mode, const void *indirect); | ^ /usr/include/GL/glew.h:22888:45: note: previous declaration ‘void (* __glewDrawArraysIndirect)(GLenum, const void*)’ 22888 | GLEW_FUN_EXPORT PFNGLDRAWARRAYSINDIRECTPROC __glewDrawArraysIndirect; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1435:99: error: ‘void __glewDrawElementsIndirect(GLenum, GLenum, const void*)’ redeclared as different kind of entity 1435 | GL_APICALL void GL_APIENTRY glDrawElementsIndirect (GLenum mode, GLenum type, const void *indirect); | ^ /usr/include/GL/glew.h:22889:47: note: previous declaration ‘void (* __glewDrawElementsIndirect)(GLenum, GLenum, const void*)’ 22889 | GLEW_FUN_EXPORT PFNGLDRAWELEMENTSINDIRECTPROC __glewDrawElementsIndirect; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1436:94: error: ‘void __glewFramebufferParameteri(GLenum, GLenum, GLint)’ redeclared as different kind of entity 1436 | GL_APICALL void GL_APIENTRY glFramebufferParameteri (GLenum target, GLenum pname, GLint param); | ^ /usr/include/GL/glew.h:22891:48: note: previous declaration ‘void (* __glewFramebufferParameteri)(GLenum, GLenum, GLint)’ 22891 | GLEW_FUN_EXPORT PFNGLFRAMEBUFFERPARAMETERIPROC __glewFramebufferParameteri; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1437:100: error: ‘void __glewGetFramebufferParameteriv(GLenum, GLenum, GLint*)’ redeclared as different kind of entity 1437 | GL_APICALL void GL_APIENTRY glGetFramebufferParameteriv (GLenum target, GLenum pname, GLint *params); | ^ /usr/include/GL/glew.h:22892:52: note: previous declaration ‘void (* __glewGetFramebufferParameteriv)(GLenum, GLenum, GLint*)’ 22892 | GLEW_FUN_EXPORT PFNGLGETFRAMEBUFFERPARAMETERIVPROC __glewGetFramebufferParameteriv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1438:122: error: ‘void __glewGetProgramInterfaceiv(GLuint, GLenum, GLenum, GLint*)’ redeclared as different kind of entity 1438 | GL_APICALL void GL_APIENTRY glGetProgramInterfaceiv (GLuint program, GLenum programInterface, GLenum pname, GLint *params); | ^ /usr/include/GL/glew.h:23110:48: note: previous declaration ‘void (* __glewGetProgramInterfaceiv)(GLuint, GLenum, GLenum, GLint*)’ 23110 | GLEW_FUN_EXPORT PFNGLGETPROGRAMINTERFACEIVPROC __glewGetProgramInterfaceiv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1439:117: error: ‘GLuint __glewGetProgramResourceIndex(GLuint, GLenum, const GLchar*)’ redeclared as different kind of entity 1439 | GL_APICALL GLuint GL_APIENTRY glGetProgramResourceIndex (GLuint program, GLenum programInterface, const GLchar *name); | ^ /usr/include/GL/glew.h:23111:50: note: previous declaration ‘GLuint (* __glewGetProgramResourceIndex)(GLuint, GLenum, const GLchar*)’ 23111 | GLEW_FUN_EXPORT PFNGLGETPROGRAMRESOURCEINDEXPROC __glewGetProgramResourceIndex; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1440:156: error: ‘void __glewGetProgramResourceName(GLuint, GLenum, GLuint, GLsizei, GLsizei*, GLchar*)’ redeclared as different kind of entity 1440 | GL_APICALL void GL_APIENTRY glGetProgramResourceName (GLuint program, GLenum programInterface, GLuint index, GLsizei bufSize, GLsizei *length, GLchar *name); | ^ /usr/include/GL/glew.h:23114:49: note: previous declaration ‘void (* __glewGetProgramResourceName)(GLuint, GLenum, GLuint, GLsizei, GLsizei*, GLchar*)’ 23114 | GLEW_FUN_EXPORT PFNGLGETPROGRAMRESOURCENAMEPROC __glewGetProgramResourceName; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1441:195: error: ‘void __glewGetProgramResourceiv(GLuint, GLenum, GLuint, GLsizei, const GLenum*, GLsizei, GLsizei*, GLint*)’ redeclared as different kind of entity 1441 | GL_APICALL void GL_APIENTRY glGetProgramResourceiv (GLuint program, GLenum programInterface, GLuint index, GLsizei propCount, const GLenum *props, GLsizei bufSize, GLsizei *length, GLint *params); | ^ /usr/include/GL/glew.h:23115:47: note: previous declaration ‘void (* __glewGetProgramResourceiv)(GLuint, GLenum, GLuint, GLsizei, const GLenum*, GLsizei, GLsizei*, GLint*)’ 23115 | GLEW_FUN_EXPORT PFNGLGETPROGRAMRESOURCEIVPROC __glewGetProgramResourceiv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1442:119: error: ‘GLint __glewGetProgramResourceLocation(GLuint, GLenum, const GLchar*)’ redeclared as different kind of entity 1442 | GL_APICALL GLint GL_APIENTRY glGetProgramResourceLocation (GLuint program, GLenum programInterface, const GLchar *name); | ^ /usr/include/GL/glew.h:23112:53: note: previous declaration ‘GLint (* __glewGetProgramResourceLocation)(GLuint, GLenum, const GLchar*)’ 23112 | GLEW_FUN_EXPORT PFNGLGETPROGRAMRESOURCELOCATIONPROC __glewGetProgramResourceLocation; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1443:99: error: ‘void __glewUseProgramStages(GLuint, GLbitfield, GLuint)’ redeclared as different kind of entity 1443 | GL_APICALL void GL_APIENTRY glUseProgramStages (GLuint pipeline, GLbitfield stages, GLuint program); | ^ /usr/include/GL/glew.h:23218:43: note: previous declaration ‘void (* __glewUseProgramStages)(GLuint, GLbitfield, GLuint)’ 23218 | GLEW_FUN_EXPORT PFNGLUSEPROGRAMSTAGESPROC __glewUseProgramStages; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1444:83: error: ‘void __glewActiveShaderProgram(GLuint, GLuint)’ redeclared as different kind of entity 1444 | GL_APICALL void GL_APIENTRY glActiveShaderProgram (GLuint pipeline, GLuint program); | ^ /usr/include/GL/glew.h:23160:46: note: previous declaration ‘void (* __glewActiveShaderProgram)(GLuint, GLuint)’ 23160 | GLEW_FUN_EXPORT PFNGLACTIVESHADERPROGRAMPROC __glewActiveShaderProgram; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1445:110: error: ‘GLuint __glewCreateShaderProgramv(GLenum, GLsizei, const GLchar* const*)’ redeclared as different kind of entity 1445 | GL_APICALL GLuint GL_APIENTRY glCreateShaderProgramv (GLenum type, GLsizei count, const GLchar *const*strings); | ^ /usr/include/GL/glew.h:23162:47: note: previous declaration ‘GLuint (* __glewCreateShaderProgramv)(GLenum, GLsizei, const GLchar* const*)’ 23162 | GLEW_FUN_EXPORT PFNGLCREATESHADERPROGRAMVPROC __glewCreateShaderProgramv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1446:67: error: ‘void __glewBindProgramPipeline(GLuint)’ redeclared as different kind of entity 1446 | GL_APICALL void GL_APIENTRY glBindProgramPipeline (GLuint pipeline); | ^ /usr/include/GL/glew.h:23161:46: note: previous declaration ‘void (* __glewBindProgramPipeline)(GLuint)’ 23161 | GLEW_FUN_EXPORT PFNGLBINDPROGRAMPIPELINEPROC __glewBindProgramPipeline; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1447:89: error: ‘void __glewDeleteProgramPipelines(GLsizei, const GLuint*)’ redeclared as different kind of entity 1447 | GL_APICALL void GL_APIENTRY glDeleteProgramPipelines (GLsizei n, const GLuint *pipelines); | ^ /usr/include/GL/glew.h:23163:49: note: previous declaration ‘void (* __glewDeleteProgramPipelines)(GLsizei, const GLuint*)’ 23163 | GLEW_FUN_EXPORT PFNGLDELETEPROGRAMPIPELINESPROC __glewDeleteProgramPipelines; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1448:80: error: ‘void __glewGenProgramPipelines(GLsizei, GLuint*)’ redeclared as different kind of entity 1448 | GL_APICALL void GL_APIENTRY glGenProgramPipelines (GLsizei n, GLuint *pipelines); | ^ /usr/include/GL/glew.h:23164:46: note: previous declaration ‘void (* __glewGenProgramPipelines)(GLsizei, GLuint*)’ 23164 | GLEW_FUN_EXPORT PFNGLGENPROGRAMPIPELINESPROC __glewGenProgramPipelines; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1449:70: error: ‘GLboolean __glewIsProgramPipeline(GLuint)’ redeclared as different kind of entity 1449 | GL_APICALL GLboolean GL_APIENTRY glIsProgramPipeline (GLuint pipeline); | ^ /usr/include/GL/glew.h:23167:44: note: previous declaration ‘GLboolean (* __glewIsProgramPipeline)(GLuint)’ 23167 | GLEW_FUN_EXPORT PFNGLISPROGRAMPIPELINEPROC __glewIsProgramPipeline; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1450:97: error: ‘void __glewGetProgramPipelineiv(GLuint, GLenum, GLint*)’ redeclared as different kind of entity 1450 | GL_APICALL void GL_APIENTRY glGetProgramPipelineiv (GLuint pipeline, GLenum pname, GLint *params); | ^ /usr/include/GL/glew.h:23166:47: note: previous declaration ‘void (* __glewGetProgramPipelineiv)(GLuint, GLenum, GLint*)’ 23166 | GLEW_FUN_EXPORT PFNGLGETPROGRAMPIPELINEIVPROC __glewGetProgramPipelineiv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1451:89: error: ‘void __glewProgramUniform1i(GLuint, GLint, GLint)’ redeclared as different kind of entity 1451 | GL_APICALL void GL_APIENTRY glProgramUniform1i (GLuint program, GLint location, GLint v0); | ^ /usr/include/GL/glew.h:23172:43: note: previous declaration ‘void (* __glewProgramUniform1i)(GLuint, GLint, GLint)’ 23172 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM1IPROC __glewProgramUniform1i; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1452:99: error: ‘void __glewProgramUniform2i(GLuint, GLint, GLint, GLint)’ redeclared as different kind of entity 1452 | GL_APICALL void GL_APIENTRY glProgramUniform2i (GLuint program, GLint location, GLint v0, GLint v1); | ^ /usr/include/GL/glew.h:23180:43: note: previous declaration ‘void (* __glewProgramUniform2i)(GLuint, GLint, GLint, GLint)’ 23180 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM2IPROC __glewProgramUniform2i; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1453:109: error: ‘void __glewProgramUniform3i(GLuint, GLint, GLint, GLint, GLint)’ redeclared as different kind of entity 1453 | GL_APICALL void GL_APIENTRY glProgramUniform3i (GLuint program, GLint location, GLint v0, GLint v1, GLint v2); | ^ /usr/include/GL/glew.h:23188:43: note: previous declaration ‘void (* __glewProgramUniform3i)(GLuint, GLint, GLint, GLint, GLint)’ 23188 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM3IPROC __glewProgramUniform3i; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1454:119: error: ‘void __glewProgramUniform4i(GLuint, GLint, GLint, GLint, GLint, GLint)’ redeclared as different kind of entity 1454 | GL_APICALL void GL_APIENTRY glProgramUniform4i (GLuint program, GLint location, GLint v0, GLint v1, GLint v2, GLint v3); | ^ /usr/include/GL/glew.h:23196:43: note: previous declaration ‘void (* __glewProgramUniform4i)(GLuint, GLint, GLint, GLint, GLint, GLint)’ 23196 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM4IPROC __glewProgramUniform4i; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1455:91: error: ‘void __glewProgramUniform1ui(GLuint, GLint, GLuint)’ redeclared as different kind of entity 1455 | GL_APICALL void GL_APIENTRY glProgramUniform1ui (GLuint program, GLint location, GLuint v0); | ^ /usr/include/GL/glew.h:23174:44: note: previous declaration ‘void (* __glewProgramUniform1ui)(GLuint, GLint, GLuint)’ 23174 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM1UIPROC __glewProgramUniform1ui; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1456:102: error: ‘void __glewProgramUniform2ui(GLuint, GLint, GLuint, GLuint)’ redeclared as different kind of entity 1456 | GL_APICALL void GL_APIENTRY glProgramUniform2ui (GLuint program, GLint location, GLuint v0, GLuint v1); | ^ /usr/include/GL/glew.h:23182:44: note: previous declaration ‘void (* __glewProgramUniform2ui)(GLuint, GLint, GLuint, GLuint)’ 23182 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM2UIPROC __glewProgramUniform2ui; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1457:113: error: ‘void __glewProgramUniform3ui(GLuint, GLint, GLuint, GLuint, GLuint)’ redeclared as different kind of entity 1457 | GL_APICALL void GL_APIENTRY glProgramUniform3ui (GLuint program, GLint location, GLuint v0, GLuint v1, GLuint v2); | ^ /usr/include/GL/glew.h:23190:44: note: previous declaration ‘void (* __glewProgramUniform3ui)(GLuint, GLint, GLuint, GLuint, GLuint)’ 23190 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM3UIPROC __glewProgramUniform3ui; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1458:124: error: ‘void __glewProgramUniform4ui(GLuint, GLint, GLuint, GLuint, GLuint, GLuint)’ redeclared as different kind of entity 1458 | GL_APICALL void GL_APIENTRY glProgramUniform4ui (GLuint program, GLint location, GLuint v0, GLuint v1, GLuint v2, GLuint v3); | ^ /usr/include/GL/glew.h:23198:44: note: previous declaration ‘void (* __glewProgramUniform4ui)(GLuint, GLint, GLuint, GLuint, GLuint, GLuint)’ 23198 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM4UIPROC __glewProgramUniform4ui; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1459:91: error: ‘void __glewProgramUniform1f(GLuint, GLint, GLfloat)’ redeclared as different kind of entity 1459 | GL_APICALL void GL_APIENTRY glProgramUniform1f (GLuint program, GLint location, GLfloat v0); | ^ /usr/include/GL/glew.h:23170:43: note: previous declaration ‘void (* __glewProgramUniform1f)(GLuint, GLint, GLfloat)’ 23170 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM1FPROC __glewProgramUniform1f; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1460:103: error: ‘void __glewProgramUniform2f(GLuint, GLint, GLfloat, GLfloat)’ redeclared as different kind of entity 1460 | GL_APICALL void GL_APIENTRY glProgramUniform2f (GLuint program, GLint location, GLfloat v0, GLfloat v1); | ^ /usr/include/GL/glew.h:23178:43: note: previous declaration ‘void (* __glewProgramUniform2f)(GLuint, GLint, GLfloat, GLfloat)’ 23178 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM2FPROC __glewProgramUniform2f; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1461:115: error: ‘void __glewProgramUniform3f(GLuint, GLint, GLfloat, GLfloat, GLfloat)’ redeclared as different kind of entity 1461 | GL_APICALL void GL_APIENTRY glProgramUniform3f (GLuint program, GLint location, GLfloat v0, GLfloat v1, GLfloat v2); | ^ /usr/include/GL/glew.h:23186:43: note: previous declaration ‘void (* __glewProgramUniform3f)(GLuint, GLint, GLfloat, GLfloat, GLfloat)’ 23186 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM3FPROC __glewProgramUniform3f; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1462:127: error: ‘void __glewProgramUniform4f(GLuint, GLint, GLfloat, GLfloat, GLfloat, GLfloat)’ redeclared as different kind of entity 1462 | GL_APICALL void GL_APIENTRY glProgramUniform4f (GLuint program, GLint location, GLfloat v0, GLfloat v1, GLfloat v2, GLfloat v3); | ^ /usr/include/GL/glew.h:23194:43: note: previous declaration ‘void (* __glewProgramUniform4f)(GLuint, GLint, GLfloat, GLfloat, GLfloat, GLfloat)’ 23194 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM4FPROC __glewProgramUniform4f; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1463:115: error: ‘void __glewProgramUniform1iv(GLuint, GLint, GLsizei, const GLint*)’ redeclared as different kind of entity 1463 | GL_APICALL void GL_APIENTRY glProgramUniform1iv (GLuint program, GLint location, GLsizei count, const GLint *value); | ^ /usr/include/GL/glew.h:23173:44: note: previous declaration ‘void (* __glewProgramUniform1iv)(GLuint, GLint, GLsizei, const GLint*)’ 23173 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM1IVPROC __glewProgramUniform1iv; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1464:115: error: ‘void __glewProgramUniform2iv(GLuint, GLint, GLsizei, const GLint*)’ redeclared as different kind of entity 1464 | GL_APICALL void GL_APIENTRY glProgramUniform2iv (GLuint program, GLint location, GLsizei count, const GLint *value); | ^ /usr/include/GL/glew.h:23181:44: note: previous declaration ‘void (* __glewProgramUniform2iv)(GLuint, GLint, GLsizei, const GLint*)’ 23181 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM2IVPROC __glewProgramUniform2iv; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1465:115: error: ‘void __glewProgramUniform3iv(GLuint, GLint, GLsizei, const GLint*)’ redeclared as different kind of entity 1465 | GL_APICALL void GL_APIENTRY glProgramUniform3iv (GLuint program, GLint location, GLsizei count, const GLint *value); | ^ /usr/include/GL/glew.h:23189:44: note: previous declaration ‘void (* __glewProgramUniform3iv)(GLuint, GLint, GLsizei, const GLint*)’ 23189 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM3IVPROC __glewProgramUniform3iv; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1466:115: error: ‘void __glewProgramUniform4iv(GLuint, GLint, GLsizei, const GLint*)’ redeclared as different kind of entity 1466 | GL_APICALL void GL_APIENTRY glProgramUniform4iv (GLuint program, GLint location, GLsizei count, const GLint *value); | ^ /usr/include/GL/glew.h:23197:44: note: previous declaration ‘void (* __glewProgramUniform4iv)(GLuint, GLint, GLsizei, const GLint*)’ 23197 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM4IVPROC __glewProgramUniform4iv; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1467:117: error: ‘void __glewProgramUniform1uiv(GLuint, GLint, GLsizei, const GLuint*)’ redeclared as different kind of entity 1467 | GL_APICALL void GL_APIENTRY glProgramUniform1uiv (GLuint program, GLint location, GLsizei count, const GLuint *value); | ^ /usr/include/GL/glew.h:23175:45: note: previous declaration ‘void (* __glewProgramUniform1uiv)(GLuint, GLint, GLsizei, const GLuint*)’ 23175 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM1UIVPROC __glewProgramUniform1uiv; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1468:117: error: ‘void __glewProgramUniform2uiv(GLuint, GLint, GLsizei, const GLuint*)’ redeclared as different kind of entity 1468 | GL_APICALL void GL_APIENTRY glProgramUniform2uiv (GLuint program, GLint location, GLsizei count, const GLuint *value); | ^ /usr/include/GL/glew.h:23183:45: note: previous declaration ‘void (* __glewProgramUniform2uiv)(GLuint, GLint, GLsizei, const GLuint*)’ 23183 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM2UIVPROC __glewProgramUniform2uiv; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1469:117: error: ‘void __glewProgramUniform3uiv(GLuint, GLint, GLsizei, const GLuint*)’ redeclared as different kind of entity 1469 | GL_APICALL void GL_APIENTRY glProgramUniform3uiv (GLuint program, GLint location, GLsizei count, const GLuint *value); | ^ /usr/include/GL/glew.h:23191:45: note: previous declaration ‘void (* __glewProgramUniform3uiv)(GLuint, GLint, GLsizei, const GLuint*)’ 23191 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM3UIVPROC __glewProgramUniform3uiv; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1470:117: error: ‘void __glewProgramUniform4uiv(GLuint, GLint, GLsizei, const GLuint*)’ redeclared as different kind of entity 1470 | GL_APICALL void GL_APIENTRY glProgramUniform4uiv (GLuint program, GLint location, GLsizei count, const GLuint *value); | ^ /usr/include/GL/glew.h:23199:45: note: previous declaration ‘void (* __glewProgramUniform4uiv)(GLuint, GLint, GLsizei, const GLuint*)’ 23199 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM4UIVPROC __glewProgramUniform4uiv; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1471:117: error: ‘void __glewProgramUniform1fv(GLuint, GLint, GLsizei, const GLfloat*)’ redeclared as different kind of entity 1471 | GL_APICALL void GL_APIENTRY glProgramUniform1fv (GLuint program, GLint location, GLsizei count, const GLfloat *value); | ^ /usr/include/GL/glew.h:23171:44: note: previous declaration ‘void (* __glewProgramUniform1fv)(GLuint, GLint, GLsizei, const GLfloat*)’ 23171 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM1FVPROC __glewProgramUniform1fv; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1472:117: error: ‘void __glewProgramUniform2fv(GLuint, GLint, GLsizei, const GLfloat*)’ redeclared as different kind of entity 1472 | GL_APICALL void GL_APIENTRY glProgramUniform2fv (GLuint program, GLint location, GLsizei count, const GLfloat *value); | ^ /usr/include/GL/glew.h:23179:44: note: previous declaration ‘void (* __glewProgramUniform2fv)(GLuint, GLint, GLsizei, const GLfloat*)’ 23179 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM2FVPROC __glewProgramUniform2fv; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1473:117: error: ‘void __glewProgramUniform3fv(GLuint, GLint, GLsizei, const GLfloat*)’ redeclared as different kind of entity 1473 | GL_APICALL void GL_APIENTRY glProgramUniform3fv (GLuint program, GLint location, GLsizei count, const GLfloat *value); | ^ /usr/include/GL/glew.h:23187:44: note: previous declaration ‘void (* __glewProgramUniform3fv)(GLuint, GLint, GLsizei, const GLfloat*)’ 23187 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM3FVPROC __glewProgramUniform3fv; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1474:117: error: ‘void __glewProgramUniform4fv(GLuint, GLint, GLsizei, const GLfloat*)’ redeclared as different kind of entity 1474 | GL_APICALL void GL_APIENTRY glProgramUniform4fv (GLuint program, GLint location, GLsizei count, const GLfloat *value); | ^ /usr/include/GL/glew.h:23195:44: note: previous declaration ‘void (* __glewProgramUniform4fv)(GLuint, GLint, GLsizei, const GLfloat*)’ 23195 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORM4FVPROC __glewProgramUniform4fv; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1475:144: error: ‘void __glewProgramUniformMatrix2fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 1475 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix2fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:23201:50: note: previous declaration ‘void (* __glewProgramUniformMatrix2fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ 23201 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX2FVPROC __glewProgramUniformMatrix2fv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1476:144: error: ‘void __glewProgramUniformMatrix3fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 1476 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix3fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:23207:50: note: previous declaration ‘void (* __glewProgramUniformMatrix3fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ 23207 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX3FVPROC __glewProgramUniformMatrix3fv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1477:144: error: ‘void __glewProgramUniformMatrix4fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 1477 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix4fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:23213:50: note: previous declaration ‘void (* __glewProgramUniformMatrix4fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ 23213 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX4FVPROC __glewProgramUniformMatrix4fv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1478:146: error: ‘void __glewProgramUniformMatrix2x3fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 1478 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix2x3fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:23203:52: note: previous declaration ‘void (* __glewProgramUniformMatrix2x3fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ 23203 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX2X3FVPROC __glewProgramUniformMatrix2x3fv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1479:146: error: ‘void __glewProgramUniformMatrix3x2fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 1479 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix3x2fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:23209:52: note: previous declaration ‘void (* __glewProgramUniformMatrix3x2fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ 23209 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX3X2FVPROC __glewProgramUniformMatrix3x2fv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1480:146: error: ‘void __glewProgramUniformMatrix2x4fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 1480 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix2x4fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:23205:52: note: previous declaration ‘void (* __glewProgramUniformMatrix2x4fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ 23205 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX2X4FVPROC __glewProgramUniformMatrix2x4fv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1481:146: error: ‘void __glewProgramUniformMatrix4x2fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 1481 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix4x2fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:23215:52: note: previous declaration ‘void (* __glewProgramUniformMatrix4x2fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ 23215 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX4X2FVPROC __glewProgramUniformMatrix4x2fv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1482:146: error: ‘void __glewProgramUniformMatrix3x4fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 1482 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix3x4fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:23211:52: note: previous declaration ‘void (* __glewProgramUniformMatrix3x4fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ 23211 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX3X4FVPROC __glewProgramUniformMatrix3x4fv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1483:146: error: ‘void __glewProgramUniformMatrix4x3fv(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ redeclared as different kind of entity 1483 | GL_APICALL void GL_APIENTRY glProgramUniformMatrix4x3fv (GLuint program, GLint location, GLsizei count, GLboolean transpose, const GLfloat *value); | ^ /usr/include/GL/glew.h:23217:52: note: previous declaration ‘void (* __glewProgramUniformMatrix4x3fv)(GLuint, GLint, GLsizei, GLboolean, const GLfloat*)’ 23217 | GLEW_FUN_EXPORT PFNGLPROGRAMUNIFORMMATRIX4X3FVPROC __glewProgramUniformMatrix4x3fv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1484:71: error: ‘void __glewValidateProgramPipeline(GLuint)’ redeclared as different kind of entity 1484 | GL_APICALL void GL_APIENTRY glValidateProgramPipeline (GLuint pipeline); | ^ /usr/include/GL/glew.h:23219:50: note: previous declaration ‘void (* __glewValidateProgramPipeline)(GLuint)’ 23219 | GLEW_FUN_EXPORT PFNGLVALIDATEPROGRAMPIPELINEPROC __glewValidateProgramPipeline; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1485:124: error: ‘void __glewGetProgramPipelineInfoLog(GLuint, GLsizei, GLsizei*, GLchar*)’ redeclared as different kind of entity 1485 | GL_APICALL void GL_APIENTRY glGetProgramPipelineInfoLog (GLuint pipeline, GLsizei bufSize, GLsizei *length, GLchar *infoLog); | ^ /usr/include/GL/glew.h:23165:52: note: previous declaration ‘void (* __glewGetProgramPipelineInfoLog)(GLuint, GLsizei, GLsizei*, GLchar*)’ 23165 | GLEW_FUN_EXPORT PFNGLGETPROGRAMPIPELINEINFOLOGPROC __glewGetProgramPipelineInfoLog; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1486:151: error: ‘void __glewBindImageTexture(GLuint, GLuint, GLint, GLboolean, GLint, GLenum, GLenum)’ redeclared as different kind of entity 1486 | GL_APICALL void GL_APIENTRY glBindImageTexture (GLuint unit, GLuint texture, GLint level, GLboolean layered, GLint layer, GLenum access, GLenum format); | ^ /usr/include/GL/glew.h:23223:43: note: previous declaration ‘void (* __glewBindImageTexture)(GLuint, GLuint, GLint, GLboolean, GLint, GLenum, GLenum)’ 23223 | GLEW_FUN_EXPORT PFNGLBINDIMAGETEXTUREPROC __glewBindImageTexture; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1487:90: error: ‘void __glewGetBooleani_v(GLenum, GLuint, GLboolean*)’ redeclared as different kind of entity 1487 | GL_APICALL void GL_APIENTRY glGetBooleani_v (GLenum target, GLuint index, GLboolean *data); | ^ /usr/include/GL/glew.h:22515:40: note: previous declaration ‘void (* __glewGetBooleani_v)(GLenum, GLuint, GLboolean*)’ 22515 | GLEW_FUN_EXPORT PFNGLGETBOOLEANI_VPROC __glewGetBooleani_v; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1488:65: error: ‘void __glewMemoryBarrier(GLbitfield)’ redeclared as different kind of entity 1488 | GL_APICALL void GL_APIENTRY glMemoryBarrier (GLbitfield barriers); | ^ /usr/include/GL/glew.h:23224:40: note: previous declaration ‘void (* __glewMemoryBarrier)(GLbitfield)’ 23224 | GLEW_FUN_EXPORT PFNGLMEMORYBARRIERPROC __glewMemoryBarrier; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1489:73: error: ‘void __glewMemoryBarrierByRegion(GLbitfield)’ redeclared as different kind of entity 1489 | GL_APICALL void GL_APIENTRY glMemoryBarrierByRegion (GLbitfield barriers); | ^ /usr/include/GL/glew.h:22720:48: note: previous declaration ‘void (* __glewMemoryBarrierByRegion)(GLbitfield)’ 22720 | GLEW_FUN_EXPORT PFNGLMEMORYBARRIERBYREGIONPROC __glewMemoryBarrierByRegion; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1490:172: error: ‘void __glewTexStorage2DMultisample(GLenum, GLsizei, GLenum, GLsizei, GLsizei, GLboolean)’ redeclared as different kind of entity 1490 | GL_APICALL void GL_APIENTRY glTexStorage2DMultisample (GLenum target, GLsizei samples, GLenum internalformat, GLsizei width, GLsizei height, GLboolean fixedsamplelocations); | ^ /usr/include/GL/glew.h:23323:50: note: previous declaration ‘void (* __glewTexStorage2DMultisample)(GLenum, GLsizei, GLenum, GLsizei, GLsizei, GLboolean)’ 23323 | GLEW_FUN_EXPORT PFNGLTEXSTORAGE2DMULTISAMPLEPROC __glewTexStorage2DMultisample; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1491:89: error: ‘void __glewGetMultisamplefv(GLenum, GLuint, GLfloat*)’ redeclared as different kind of entity 1491 | GL_APICALL void GL_APIENTRY glGetMultisamplefv (GLenum pname, GLuint index, GLfloat *val); | ^ /usr/include/GL/glew.h:23314:43: note: previous declaration ‘void (* __glewGetMultisamplefv)(GLenum, GLuint, GLfloat*)’ 23314 | GLEW_FUN_EXPORT PFNGLGETMULTISAMPLEFVPROC __glewGetMultisamplefv; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1492:78: error: ‘void __glewSampleMaski(GLuint, GLbitfield)’ redeclared as different kind of entity 1492 | GL_APICALL void GL_APIENTRY glSampleMaski (GLuint maskNumber, GLbitfield mask); | ^ /usr/include/GL/glew.h:23315:38: note: previous declaration ‘void (* __glewSampleMaski)(GLuint, GLbitfield)’ 23315 | GLEW_FUN_EXPORT PFNGLSAMPLEMASKIPROC __glewSampleMaski; | ^~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1495:116: error: ‘void __glewBindVertexBuffer(GLuint, GLuint, GLintptr, GLsizei)’ redeclared as different kind of entity 1495 | GL_APICALL void GL_APIENTRY glBindVertexBuffer (GLuint bindingindex, GLuint buffer, GLintptr offset, GLsizei stride); | ^ /usr/include/GL/glew.h:23382:43: note: previous declaration ‘void (* __glewBindVertexBuffer)(GLuint, GLuint, GLintptr, GLsizei)’ 23382 | GLEW_FUN_EXPORT PFNGLBINDVERTEXBUFFERPROC __glewBindVertexBuffer; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1496:139: error: ‘void __glewVertexAttribFormat(GLuint, GLint, GLenum, GLboolean, GLuint)’ redeclared as different kind of entity 1496 | GL_APICALL void GL_APIENTRY glVertexAttribFormat (GLuint attribindex, GLint size, GLenum type, GLboolean normalized, GLuint relativeoffset); | ^ /usr/include/GL/glew.h:23390:45: note: previous declaration ‘void (* __glewVertexAttribFormat)(GLuint, GLint, GLenum, GLboolean, GLuint)’ 23390 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBFORMATPROC __glewVertexAttribFormat; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1497:118: error: ‘void __glewVertexAttribIFormat(GLuint, GLint, GLenum, GLuint)’ redeclared as different kind of entity 1497 | GL_APICALL void GL_APIENTRY glVertexAttribIFormat (GLuint attribindex, GLint size, GLenum type, GLuint relativeoffset); | ^ /usr/include/GL/glew.h:23391:46: note: previous declaration ‘void (* __glewVertexAttribIFormat)(GLuint, GLint, GLenum, GLuint)’ 23391 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBIFORMATPROC __glewVertexAttribIFormat; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1498:91: error: ‘void __glewVertexAttribBinding(GLuint, GLuint)’ redeclared as different kind of entity 1498 | GL_APICALL void GL_APIENTRY glVertexAttribBinding (GLuint attribindex, GLuint bindingindex); | ^ /usr/include/GL/glew.h:23389:46: note: previous declaration ‘void (* __glewVertexAttribBinding)(GLuint, GLuint)’ 23389 | GLEW_FUN_EXPORT PFNGLVERTEXATTRIBBINDINGPROC __glewVertexAttribBinding; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1499:88: error: ‘void __glewVertexBindingDivisor(GLuint, GLuint)’ redeclared as different kind of entity 1499 | GL_APICALL void GL_APIENTRY glVertexBindingDivisor (GLuint bindingindex, GLuint divisor); | ^ /usr/include/GL/glew.h:23393:47: note: previous declaration ‘void (* __glewVertexBindingDivisor)(GLuint, GLuint)’ 23393 | GLEW_FUN_EXPORT PFNGLVERTEXBINDINGDIVISORPROC __glewVertexBindingDivisor; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1722:28: error: conflicting declaration ‘typedef void (* PFNGLOBJECTPTRLABELPROC)(const void*, GLsizei, const GLchar*)’ 1722 | typedef void (GL_APIENTRYP PFNGLOBJECTPTRLABELPROC) (const void *ptr, GLsizei length, const GLchar *label); | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GL/glew.h:14422:28: note: previous declaration as ‘typedef void (* PFNGLOBJECTPTRLABELPROC)(void*, GLsizei, const GLchar*)’ 14422 | typedef void (GLAPIENTRY * PFNGLOBJECTPTRLABELPROC) (void* ptr, GLsizei length, const GLchar* label); | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1723:28: error: conflicting declaration ‘typedef void (* PFNGLGETOBJECTPTRLABELPROC)(const void*, GLsizei, GLsizei*, GLchar*)’ 1723 | typedef void (GL_APIENTRYP PFNGLGETOBJECTPTRLABELPROC) (const void *ptr, GLsizei bufSize, GLsizei *length, GLchar *label); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GL/glew.h:14420:28: note: previous declaration as ‘typedef void (* PFNGLGETOBJECTPTRLABELPROC)(void*, GLsizei, GLsizei*, GLchar*)’ 14420 | typedef void (GLAPIENTRY * PFNGLGETOBJECTPTRLABELPROC) (void* ptr, GLsizei bufSize, GLsizei* length, GLchar *label); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1758:274: error: ‘void __glewCopyImageSubData(GLuint, GLenum, GLint, GLint, GLint, GLint, GLuint, GLenum, GLint, GLint, GLint, GLint, GLsizei, GLsizei, GLsizei)’ redeclared as different kind of entity 1758 | GL_APICALL void GL_APIENTRY glCopyImageSubData (GLuint srcName, GLenum srcTarget, GLint srcLevel, GLint srcX, GLint srcY, GLint srcZ, GLuint dstName, GLenum dstTarget, GLint dstLevel, GLint dstX, GLint dstY, GLint dstZ, GLsizei srcWidth, GLsizei srcHeight, GLsizei srcDepth); | ^ /usr/include/GL/glew.h:22771:43: note: previous declaration ‘void (* __glewCopyImageSubData)(GLuint, GLenum, GLint, GLint, GLint, GLint, GLuint, GLenum, GLint, GLint, GLint, GLint, GLsizei, GLsizei, GLsizei)’ 22771 | GLEW_FUN_EXPORT PFNGLCOPYIMAGESUBDATAPROC __glewCopyImageSubData; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1759:148: error: ‘void __glewDebugMessageControl(GLenum, GLenum, GLenum, GLsizei, const GLuint*, GLboolean)’ redeclared as different kind of entity 1759 | GL_APICALL void GL_APIENTRY glDebugMessageControl (GLenum source, GLenum type, GLenum severity, GLsizei count, const GLuint *ids, GLboolean enabled); | ^ /usr/include/GL/glew.h:24417:46: note: previous declaration ‘void (* __glewDebugMessageControl)(GLenum, GLenum, GLenum, GLsizei, const GLuint*, GLboolean)’ 24417 | GLEW_FUN_EXPORT PFNGLDEBUGMESSAGECONTROLPROC __glewDebugMessageControl; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1760:140: error: ‘void __glewDebugMessageInsert(GLenum, GLenum, GLuint, GLenum, GLsizei, const GLchar*)’ redeclared as different kind of entity 1760 | GL_APICALL void GL_APIENTRY glDebugMessageInsert (GLenum source, GLenum type, GLuint id, GLenum severity, GLsizei length, const GLchar *buf); | ^ /usr/include/GL/glew.h:24418:45: note: previous declaration ‘void (* __glewDebugMessageInsert)(GLenum, GLenum, GLuint, GLenum, GLsizei, const GLchar*)’ 24418 | GLEW_FUN_EXPORT PFNGLDEBUGMESSAGEINSERTPROC __glewDebugMessageInsert; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1761:96: error: ‘void __glewDebugMessageCallback(GLDEBUGPROC, const void*)’ redeclared as different kind of entity 1761 | GL_APICALL void GL_APIENTRY glDebugMessageCallback (GLDEBUGPROC callback, const void *userParam); | ^ /usr/include/GL/glew.h:24416:47: note: previous declaration ‘void (* __glewDebugMessageCallback)(GLDEBUGPROC, const void*)’ 24416 | GLEW_FUN_EXPORT PFNGLDEBUGMESSAGECALLBACKPROC __glewDebugMessageCallback; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1762:185: error: ‘GLuint __glewGetDebugMessageLog(GLuint, GLsizei, GLenum*, GLenum*, GLuint*, GLenum*, GLsizei*, GLchar*)’ redeclared as different kind of entity 1762 | GL_APICALL GLuint GL_APIENTRY glGetDebugMessageLog (GLuint count, GLsizei bufSize, GLenum *sources, GLenum *types, GLuint *ids, GLenum *severities, GLsizei *lengths, GLchar *messageLog); | ^ /usr/include/GL/glew.h:24419:45: note: previous declaration ‘GLuint (* __glewGetDebugMessageLog)(GLuint, GLsizei, GLenum*, GLenum*, GLuint*, GLenum*, GLsizei*, GLchar*)’ 24419 | GLEW_FUN_EXPORT PFNGLGETDEBUGMESSAGELOGPROC __glewGetDebugMessageLog; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1763:110: error: ‘void __glewPushDebugGroup(GLenum, GLuint, GLsizei, const GLchar*)’ redeclared as different kind of entity 1763 | GL_APICALL void GL_APIENTRY glPushDebugGroup (GLenum source, GLuint id, GLsizei length, const GLchar *message); | ^ /usr/include/GL/glew.h:24425:41: note: previous declaration ‘void (* __glewPushDebugGroup)(GLenum, GLuint, GLsizei, const GLchar*)’ 24425 | GLEW_FUN_EXPORT PFNGLPUSHDEBUGGROUPPROC __glewPushDebugGroup; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1764:50: error: ‘void __glewPopDebugGroup()’ redeclared as different kind of entity 1764 | GL_APICALL void GL_APIENTRY glPopDebugGroup (void); | ^ /usr/include/GL/glew.h:24424:40: note: previous declaration ‘void (* __glewPopDebugGroup)()’ 24424 | GLEW_FUN_EXPORT PFNGLPOPDEBUGGROUPPROC __glewPopDebugGroup; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1765:111: error: ‘void __glewObjectLabel(GLenum, GLuint, GLsizei, const GLchar*)’ redeclared as different kind of entity 1765 | GL_APICALL void GL_APIENTRY glObjectLabel (GLenum identifier, GLuint name, GLsizei length, const GLchar *label); | ^ /usr/include/GL/glew.h:24422:38: note: previous declaration ‘void (* __glewObjectLabel)(GLenum, GLuint, GLsizei, const GLchar*)’ 24422 | GLEW_FUN_EXPORT PFNGLOBJECTLABELPROC __glewObjectLabel; | ^~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1766:126: error: ‘void __glewGetObjectLabel(GLenum, GLuint, GLsizei, GLsizei*, GLchar*)’ redeclared as different kind of entity 1766 | GL_APICALL void GL_APIENTRY glGetObjectLabel (GLenum identifier, GLuint name, GLsizei bufSize, GLsizei *length, GLchar *label); | ^ /usr/include/GL/glew.h:24420:41: note: previous declaration ‘void (* __glewGetObjectLabel)(GLenum, GLuint, GLsizei, GLsizei*, GLchar*)’ 24420 | GLEW_FUN_EXPORT PFNGLGETOBJECTLABELPROC __glewGetObjectLabel; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1767:99: error: ‘void __glewObjectPtrLabel(const void*, GLsizei, const GLchar*)’ redeclared as different kind of entity 1767 | GL_APICALL void GL_APIENTRY glObjectPtrLabel (const void *ptr, GLsizei length, const GLchar *label); | ^ /usr/include/GL/glew.h:24423:41: note: previous declaration ‘void (* __glewObjectPtrLabel)(void*, GLsizei, const GLchar*)’ 24423 | GLEW_FUN_EXPORT PFNGLOBJECTPTRLABELPROC __glewObjectPtrLabel; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1768:114: error: ‘void __glewGetObjectPtrLabel(const void*, GLsizei, GLsizei*, GLchar*)’ redeclared as different kind of entity 1768 | GL_APICALL void GL_APIENTRY glGetObjectPtrLabel (const void *ptr, GLsizei bufSize, GLsizei *length, GLchar *label); | ^ /usr/include/GL/glew.h:24421:44: note: previous declaration ‘void (* __glewGetObjectPtrLabel)(void*, GLsizei, GLsizei*, GLchar*)’ 24421 | GLEW_FUN_EXPORT PFNGLGETOBJECTPTRLABELPROC __glewGetObjectPtrLabel; | ^~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1770:67: error: ‘void __glewEnablei(GLenum, GLuint)’ redeclared as different kind of entity 1770 | GL_APICALL void GL_APIENTRY glEnablei (GLenum target, GLuint index); | ^ /usr/include/GL/glew.h:22512:34: note: previous declaration ‘void (* __glewEnablei)(GLenum, GLuint)’ 22512 | GLEW_FUN_EXPORT PFNGLENABLEIPROC __glewEnablei; | ^~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1771:68: error: ‘void __glewDisablei(GLenum, GLuint)’ redeclared as different kind of entity 1771 | GL_APICALL void GL_APIENTRY glDisablei (GLenum target, GLuint index); | ^ /usr/include/GL/glew.h:22511:35: note: previous declaration ‘void (* __glewDisablei)(GLenum, GLuint)’ 22511 | GLEW_FUN_EXPORT PFNGLDISABLEIPROC __glewDisablei; | ^~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1772:70: error: ‘void __glewBlendEquationi(GLuint, GLenum)’ redeclared as different kind of entity 1772 | GL_APICALL void GL_APIENTRY glBlendEquationi (GLuint buf, GLenum mode); | ^ /usr/include/GL/glew.h:22570:41: note: previous declaration ‘void (* __glewBlendEquationi)(GLuint, GLenum)’ 22570 | GLEW_FUN_EXPORT PFNGLBLENDEQUATIONIPROC __glewBlendEquationi; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1773:99: error: ‘void __glewBlendEquationSeparatei(GLuint, GLenum, GLenum)’ redeclared as different kind of entity 1773 | GL_APICALL void GL_APIENTRY glBlendEquationSeparatei (GLuint buf, GLenum modeRGB, GLenum modeAlpha); | ^ /usr/include/GL/glew.h:22569:49: note: previous declaration ‘void (* __glewBlendEquationSeparatei)(GLuint, GLenum, GLenum)’ 22569 | GLEW_FUN_EXPORT PFNGLBLENDEQUATIONSEPARATEIPROC __glewBlendEquationSeparatei; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1774:77: error: ‘void __glewBlendFunci(GLuint, GLenum, GLenum)’ redeclared as different kind of entity 1774 | GL_APICALL void GL_APIENTRY glBlendFunci (GLuint buf, GLenum src, GLenum dst); | ^ /usr/include/GL/glew.h:22572:37: note: previous declaration ‘void (* __glewBlendFunci)(GLuint, GLenum, GLenum)’ 22572 | GLEW_FUN_EXPORT PFNGLBLENDFUNCIPROC __glewBlendFunci; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1775:125: error: ‘void __glewBlendFuncSeparatei(GLuint, GLenum, GLenum, GLenum, GLenum)’ redeclared as different kind of entity 1775 | GL_APICALL void GL_APIENTRY glBlendFuncSeparatei (GLuint buf, GLenum srcRGB, GLenum dstRGB, GLenum srcAlpha, GLenum dstAlpha); | ^ /usr/include/GL/glew.h:22571:45: note: previous declaration ‘void (* __glewBlendFuncSeparatei)(GLuint, GLenum, GLenum, GLenum, GLenum)’ 22571 | GLEW_FUN_EXPORT PFNGLBLENDFUNCSEPARATEIPROC __glewBlendFuncSeparatei; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1776:107: error: ‘void __glewColorMaski(GLuint, GLboolean, GLboolean, GLboolean, GLboolean)’ redeclared as different kind of entity 1776 | GL_APICALL void GL_APIENTRY glColorMaski (GLuint index, GLboolean r, GLboolean g, GLboolean b, GLboolean a); | ^ /usr/include/GL/glew.h:22510:37: note: previous declaration ‘void (* __glewColorMaski)(GLuint, GLboolean, GLboolean, GLboolean, GLboolean)’ 22510 | GLEW_FUN_EXPORT PFNGLCOLORMASKIPROC __glewColorMaski; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1777:75: error: ‘GLboolean __glewIsEnabledi(GLenum, GLuint)’ redeclared as different kind of entity 1777 | GL_APICALL GLboolean GL_APIENTRY glIsEnabledi (GLenum target, GLuint index); | ^ /usr/include/GL/glew.h:22524:37: note: previous declaration ‘GLboolean (* __glewIsEnabledi)(GLenum, GLuint)’ 22524 | GLEW_FUN_EXPORT PFNGLISENABLEDIPROC __glewIsEnabledi; | ^~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1778:133: error: ‘void __glewDrawElementsBaseVertex(GLenum, GLsizei, GLenum, const void*, GLint)’ redeclared as different kind of entity 1778 | GL_APICALL void GL_APIENTRY glDrawElementsBaseVertex (GLenum mode, GLsizei count, GLenum type, const void *indices, GLint basevertex); | ^ /usr/include/GL/glew.h:22883:49: note: previous declaration ‘void (* __glewDrawElementsBaseVertex)(GLenum, GLsizei, GLenum, const void*, GLint)’ 22883 | GLEW_FUN_EXPORT PFNGLDRAWELEMENTSBASEVERTEXPROC __glewDrawElementsBaseVertex; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1779:164: error: ‘void __glewDrawRangeElementsBaseVertex(GLenum, GLuint, GLuint, GLsizei, GLenum, const void*, GLint)’ redeclared as different kind of entity 1779 | GL_APICALL void GL_APIENTRY glDrawRangeElementsBaseVertex (GLenum mode, GLuint start, GLuint end, GLsizei count, GLenum type, const void *indices, GLint basevertex); | ^ /usr/include/GL/glew.h:22885:54: note: previous declaration ‘void (* __glewDrawRangeElementsBaseVertex)(GLenum, GLuint, GLuint, GLsizei, GLenum, const void*, GLint)’ 22885 | GLEW_FUN_EXPORT PFNGLDRAWRANGEELEMENTSBASEVERTEXPROC __glewDrawRangeElementsBaseVertex; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1780:165: error: ‘void __glewDrawElementsInstancedBaseVertex(GLenum, GLsizei, GLenum, const void*, GLsizei, GLint)’ redeclared as different kind of entity 1780 | GL_APICALL void GL_APIENTRY glDrawElementsInstancedBaseVertex (GLenum mode, GLsizei count, GLenum type, const void *indices, GLsizei instancecount, GLint basevertex); | ^ /usr/include/GL/glew.h:22884:58: note: previous declaration ‘void (* __glewDrawElementsInstancedBaseVertex)(GLenum, GLsizei, GLenum, const void*, GLsizei, GLint)’ 22884 | GLEW_FUN_EXPORT PFNGLDRAWELEMENTSINSTANCEDBASEVERTEXPROC __glewDrawElementsInstancedBaseVertex; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1781:112: error: ‘void __glewFramebufferTexture(GLenum, GLenum, GLuint, GLint)’ redeclared as different kind of entity 1781 | GL_APICALL void GL_APIENTRY glFramebufferTexture (GLenum target, GLenum attachment, GLuint texture, GLint level); | ^ /usr/include/GL/glew.h:22563:45: note: previous declaration ‘void (* __glewFramebufferTexture)(GLenum, GLenum, GLuint, GLint)’ 22563 | GLEW_FUN_EXPORT PFNGLFRAMEBUFFERTEXTUREPROC __glewFramebufferTexture; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1783:61: error: ‘GLenum __glewGetGraphicsResetStatus()’ redeclared as different kind of entity 1783 | GL_APICALL GLenum GL_APIENTRY glGetGraphicsResetStatus (void); | ^ /usr/include/GL/glew.h:22575:49: note: previous declaration ‘GLenum (* __glewGetGraphicsResetStatus)()’ 22575 | GLEW_FUN_EXPORT PFNGLGETGRAPHICSRESETSTATUSPROC __glewGetGraphicsResetStatus; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1784:148: error: ‘void __glewReadnPixels(GLint, GLint, GLsizei, GLsizei, GLenum, GLenum, GLsizei, void*)’ redeclared as different kind of entity 1784 | GL_APICALL void GL_APIENTRY glReadnPixels (GLint x, GLint y, GLsizei width, GLsizei height, GLenum format, GLenum type, GLsizei bufSize, void *data); | ^ /usr/include/GL/glew.h:24432:38: note: previous declaration ‘void (* __glewReadnPixels)(GLint, GLint, GLsizei, GLsizei, GLenum, GLenum, GLsizei, void*)’ 24432 | GLEW_FUN_EXPORT PFNGLREADNPIXELSPROC __glewReadnPixels; | ^~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1785:110: error: ‘void __glewGetnUniformfv(GLuint, GLint, GLsizei, GLfloat*)’ redeclared as different kind of entity 1785 | GL_APICALL void GL_APIENTRY glGetnUniformfv (GLuint program, GLint location, GLsizei bufSize, GLfloat *params); | ^ /usr/include/GL/glew.h:24429:40: note: previous declaration ‘void (* __glewGetnUniformfv)(GLuint, GLint, GLsizei, GLfloat*)’ 24429 | GLEW_FUN_EXPORT PFNGLGETNUNIFORMFVPROC __glewGetnUniformfv; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1786:108: error: ‘void __glewGetnUniformiv(GLuint, GLint, GLsizei, GLint*)’ redeclared as different kind of entity 1786 | GL_APICALL void GL_APIENTRY glGetnUniformiv (GLuint program, GLint location, GLsizei bufSize, GLint *params); | ^ /usr/include/GL/glew.h:24430:40: note: previous declaration ‘void (* __glewGetnUniformiv)(GLuint, GLint, GLsizei, GLint*)’ 24430 | GLEW_FUN_EXPORT PFNGLGETNUNIFORMIVPROC __glewGetnUniformiv; | ^~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1787:110: error: ‘void __glewGetnUniformuiv(GLuint, GLint, GLsizei, GLuint*)’ redeclared as different kind of entity 1787 | GL_APICALL void GL_APIENTRY glGetnUniformuiv (GLuint program, GLint location, GLsizei bufSize, GLuint *params); | ^ /usr/include/GL/glew.h:24431:41: note: previous declaration ‘void (* __glewGetnUniformuiv)(GLuint, GLint, GLsizei, GLuint*)’ 24431 | GLEW_FUN_EXPORT PFNGLGETNUNIFORMUIVPROC __glewGetnUniformuiv; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1788:62: error: ‘void __glewMinSampleShading(GLfloat)’ redeclared as different kind of entity 1788 | GL_APICALL void GL_APIENTRY glMinSampleShading (GLfloat value); | ^ /usr/include/GL/glew.h:22573:43: note: previous declaration ‘void (* __glewMinSampleShading)(GLclampf)’ 22573 | GLEW_FUN_EXPORT PFNGLMINSAMPLESHADINGPROC __glewMinSampleShading; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1789:73: error: ‘void __glewPatchParameteri(GLenum, GLint)’ redeclared as different kind of entity 1789 | GL_APICALL void GL_APIENTRY glPatchParameteri (GLenum pname, GLint value); | ^ /usr/include/GL/glew.h:23297:42: note: previous declaration ‘void (* __glewPatchParameteri)(GLenum, GLint)’ 23297 | GLEW_FUN_EXPORT PFNGLPATCHPARAMETERIPROC __glewPatchParameteri; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1790:96: error: ‘void __glewTexParameterIiv(GLenum, GLenum, const GLint*)’ redeclared as different kind of entity 1790 | GL_APICALL void GL_APIENTRY glTexParameterIiv (GLenum target, GLenum pname, const GLint *params); | ^ /usr/include/GL/glew.h:22525:42: note: previous declaration ‘void (* __glewTexParameterIiv)(GLenum, GLenum, const GLint*)’ 22525 | GLEW_FUN_EXPORT PFNGLTEXPARAMETERIIVPROC __glewTexParameterIiv; | ^~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1791:98: error: ‘void __glewTexParameterIuiv(GLenum, GLenum, const GLuint*)’ redeclared as different kind of entity 1791 | GL_APICALL void GL_APIENTRY glTexParameterIuiv (GLenum target, GLenum pname, const GLuint *params); | ^ /usr/include/GL/glew.h:22526:43: note: previous declaration ‘void (* __glewTexParameterIuiv)(GLenum, GLenum, const GLuint*)’ 22526 | GLEW_FUN_EXPORT PFNGLTEXPARAMETERIUIVPROC __glewTexParameterIuiv; | ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1792:93: error: ‘void __glewGetTexParameterIiv(GLenum, GLenum, GLint*)’ redeclared as different kind of entity 1792 | GL_APICALL void GL_APIENTRY glGetTexParameterIiv (GLenum target, GLenum pname, GLint *params); | ^ /usr/include/GL/glew.h:22518:45: note: previous declaration ‘void (* __glewGetTexParameterIiv)(GLenum, GLenum, GLint*)’ 22518 | GLEW_FUN_EXPORT PFNGLGETTEXPARAMETERIIVPROC __glewGetTexParameterIiv; | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1793:95: error: ‘void __glewGetTexParameterIuiv(GLenum, GLenum, GLuint*)’ redeclared as different kind of entity 1793 | GL_APICALL void GL_APIENTRY glGetTexParameterIuiv (GLenum target, GLenum pname, GLuint *params); | ^ /usr/include/GL/glew.h:22519:46: note: previous declaration ‘void (* __glewGetTexParameterIuiv)(GLenum, GLenum, GLuint*)’ 22519 | GLEW_FUN_EXPORT PFNGLGETTEXPARAMETERIUIVPROC __glewGetTexParameterIuiv; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1794:100: error: ‘void __glewSamplerParameterIiv(GLuint, GLenum, const GLint*)’ redeclared as different kind of entity 1794 | GL_APICALL void GL_APIENTRY glSamplerParameterIiv (GLuint sampler, GLenum pname, const GLint *param); | ^ /usr/include/GL/glew.h:23153:46: note: previous declaration ‘void (* __glewSamplerParameterIiv)(GLuint, GLenum, const GLint*)’ 23153 | GLEW_FUN_EXPORT PFNGLSAMPLERPARAMETERIIVPROC __glewSamplerParameterIiv; | ^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1795:102: error: ‘void __glewSamplerParameterIuiv(GLuint, GLenum, const GLuint*)’ redeclared as different kind of entity 1795 | GL_APICALL void GL_APIENTRY glSamplerParameterIuiv (GLuint sampler, GLenum pname, const GLuint *param); | ^ /usr/include/GL/glew.h:23154:47: note: previous declaration ‘void (* __glewSamplerParameterIuiv)(GLuint, GLenum, const GLuint*)’ 23154 | GLEW_FUN_EXPORT PFNGLSAMPLERPARAMETERIUIVPROC __glewSamplerParameterIuiv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1796:98: error: ‘void __glewGetSamplerParameterIiv(GLuint, GLenum, GLint*)’ redeclared as different kind of entity 1796 | GL_APICALL void GL_APIENTRY glGetSamplerParameterIiv (GLuint sampler, GLenum pname, GLint *params); | ^ /usr/include/GL/glew.h:23148:49: note: previous declaration ‘void (* __glewGetSamplerParameterIiv)(GLuint, GLenum, GLint*)’ 23148 | GLEW_FUN_EXPORT PFNGLGETSAMPLERPARAMETERIIVPROC __glewGetSamplerParameterIiv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1797:100: error: ‘void __glewGetSamplerParameterIuiv(GLuint, GLenum, GLuint*)’ redeclared as different kind of entity 1797 | GL_APICALL void GL_APIENTRY glGetSamplerParameterIuiv (GLuint sampler, GLenum pname, GLuint *params); | ^ /usr/include/GL/glew.h:23149:50: note: previous declaration ‘void (* __glewGetSamplerParameterIuiv)(GLuint, GLenum, GLuint*)’ 23149 | GLEW_FUN_EXPORT PFNGLGETSAMPLERPARAMETERIUIVPROC __glewGetSamplerParameterIuiv; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1798:93: error: ‘void __glewTexBuffer(GLenum, GLenum, GLuint)’ redeclared as different kind of entity 1798 | GL_APICALL void GL_APIENTRY glTexBuffer (GLenum target, GLenum internalformat, GLuint buffer); | ^ /usr/include/GL/glew.h:22561:36: note: previous declaration ‘void (* __glewTexBuffer)(GLenum, GLenum, GLuint)’ 22561 | GLEW_FUN_EXPORT PFNGLTEXBUFFERPROC __glewTexBuffer; | ^~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1799:132: error: ‘void __glewTexBufferRange(GLenum, GLenum, GLuint, GLintptr, GLsizeiptr)’ redeclared as different kind of entity 1799 | GL_APICALL void GL_APIENTRY glTexBufferRange (GLenum target, GLenum internalformat, GLuint buffer, GLintptr offset, GLsizeiptr size); | ^ /usr/include/GL/glew.h:23303:41: note: previous declaration ‘void (* __glewTexBufferRange)(GLenum, GLenum, GLuint, GLintptr, GLsizeiptr)’ 23303 | GLEW_FUN_EXPORT PFNGLTEXBUFFERRANGEPROC __glewTexBufferRange; | ^~~~~~~~~~~~~~~~~~~~ /usr/include/GLES3/gl32.h:1800:187: error: ‘void __glewTexStorage3DMultisample(GLenum, GLsizei, GLenum, GLsizei, GLsizei, GLsizei, GLboolean)’ redeclared as different kind of entity 1800 | GL_APICALL void GL_APIENTRY glTexStorage3DMultisample (GLenum target, GLsizei samples, GLenum internalformat, GLsizei width, GLsizei height, GLsizei depth, GLboolean fixedsamplelocations); | ^ /usr/include/GL/glew.h:23324:50: note: previous declaration ‘void (* __glewTexStorage3DMultisample)(GLenum, GLsizei, GLenum, GLsizei, GLsizei, GLsizei, GLboolean)’ 23324 | GLEW_FUN_EXPORT PFNGLTEXSTORAGE3DMULTISAMPLEPROC __glewTexStorage3DMultisample; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderSetup.h:13: /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat()’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:53:49: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 53 | pixelFormat(PixelFormat::RGB_32) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /<>/include/BALL/VIEW/RENDERING/renderTarget.h:16: /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:38: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:60:49: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 60 | pixelFormat(pixelFormat) | ^~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:38: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ /<>/include/BALL/VIEW/RENDERING/renderTarget.h: In constructor ‘BALL::VIEW::FrameBufferFormat::FrameBufferFormat(BALL::Size, BALL::Size, BALL::Size, const BALL::VIEW::PixelFormat&)’: /<>/include/BALL/VIEW/RENDERING/renderTarget.h:69:49: warning: implicitly-declared ‘constexpr BALL::VIEW::PixelFormat::PixelFormat(const BALL::VIEW::PixelFormat&)’ is deprecated [-Wdeprecated-copy] 69 | pixelFormat(pixelFormat) | ^~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/VIEW/RENDERING/pixelFormat.h:162:38: note: because ‘BALL::VIEW::PixelFormat’ has user-provided ‘BALL::VIEW::PixelFormat& BALL::VIEW::PixelFormat::operator=(const BALL::VIEW::PixelFormat&)’ 162 | PixelFormat &operator=(const PixelFormat &f) | ^~~~~~~~ In file included from /<>/include/BALL/DATATYPE/string.h:15, from /<>/build/VIEW_autogen/2AM2ODBFSX/../../../include/BALL/VIEW/DATATYPE/dataset.h:9, from /<>/build/VIEW_autogen/2AM2ODBFSX/moc_dataset.cpp:10, from /<>/build/VIEW_autogen/mocs_compilation.cpp:2: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ParametersBase::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:43:17: note: in expansion of macro ‘BALL_CREATE’ 43 | BALL_CREATE(MMFF94ParametersBase) | ^~~~~~~~~~~ In file included from /<>/include/BALL/MOLMEC/MMFF94/MMFF94.h:25, from /<>/build/VIEW_autogen/WWXRSHT6NL/../../../include/BALL/VIEW/WIDGETS/molecularStructure.h:57, from /<>/build/VIEW_autogen/WWXRSHT6NL/moc_molecularStructure.cpp:10, from /<>/build/VIEW_autogen/mocs_compilation.cpp:76: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:226:48: note: because ‘BALL::MMFF94StretchParameters’ has user-provided ‘const BALL::MMFF94StretchParameters& BALL::MMFF94StretchParameters::operator=(const BALL::MMFF94StretchParameters&)’ 226 | const MMFF94StretchParameters& operator = (const MMFF94StretchParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:185:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 185 | class BALL_EXPORT MMFF94StretchParameters: | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchParameters::MMFF94StretchParameters(const BALL::MMFF94StretchParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:217:17: note: in expansion of macro ‘BALL_CREATE’ 217 | BALL_CREATE(MMFF94StretchParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:280:45: note: because ‘BALL::MMFF94BendParameters’ has user-provided ‘const BALL::MMFF94BendParameters& BALL::MMFF94BendParameters::operator=(const BALL::MMFF94BendParameters&)’ 280 | const MMFF94BendParameters& operator = (const MMFF94BendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:263:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 263 | class BALL_EXPORT MMFF94BendParameters | ^~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94BendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94BendParameters::MMFF94BendParameters(const BALL::MMFF94BendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:271:17: note: in expansion of macro ‘BALL_CREATE’ 271 | BALL_CREATE(MMFF94BendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:327:52: note: because ‘BALL::MMFF94StretchBendParameters’ has user-provided ‘const BALL::MMFF94StretchBendParameters& BALL::MMFF94StretchBendParameters::operator=(const BALL::MMFF94StretchBendParameters&)’ 327 | const MMFF94StretchBendParameters& operator = (const MMFF94StretchBendParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:310:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 310 | class BALL_EXPORT MMFF94StretchBendParameters | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94StretchBendParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94StretchBendParameters::MMFF94StretchBendParameters(const BALL::MMFF94StretchBendParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:318:17: note: in expansion of macro ‘BALL_CREATE’ 318 | BALL_CREATE(MMFF94StretchBendParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:383:48: note: because ‘BALL::MMFF94TorsionParameters’ has user-provided ‘const BALL::MMFF94TorsionParameters& BALL::MMFF94TorsionParameters::operator=(const BALL::MMFF94TorsionParameters&)’ 383 | const MMFF94TorsionParameters& operator = (const MMFF94TorsionParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:366:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 366 | class BALL_EXPORT MMFF94TorsionParameters | ^~~~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94TorsionParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94TorsionParameters::MMFF94TorsionParameters(const BALL::MMFF94TorsionParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:374:17: note: in expansion of macro ‘BALL_CREATE’ 374 | BALL_CREATE(MMFF94TorsionParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:431:46: note: because ‘BALL::MMFF94PlaneParameters’ has user-provided ‘const BALL::MMFF94PlaneParameters& BALL::MMFF94PlaneParameters::operator=(const BALL::MMFF94PlaneParameters&)’ 431 | const MMFF94PlaneParameters& operator = (const MMFF94PlaneParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:414:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 414 | class BALL_EXPORT MMFF94PlaneParameters | ^~~~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94PlaneParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94PlaneParameters::MMFF94PlaneParameters(const BALL::MMFF94PlaneParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:422:17: note: in expansion of macro ‘BALL_CREATE’ 422 | BALL_CREATE(MMFF94PlaneParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:482:44: note: because ‘BALL::MMFF94VDWParameters’ has user-provided ‘const BALL::MMFF94VDWParameters& BALL::MMFF94VDWParameters::operator=(const BALL::MMFF94VDWParameters&)’ 482 | const MMFF94VDWParameters& operator = (const MMFF94VDWParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:458:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 458 | class BALL_EXPORT MMFF94VDWParameters | ^~~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94VDWParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94VDWParameters::MMFF94VDWParameters(const BALL::MMFF94VDWParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:473:17: note: in expansion of macro ‘BALL_CREATE’ 473 | BALL_CREATE(MMFF94VDWParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: warning: implicitly-declared ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ is deprecated [-Wdeprecated-copy] 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:539:43: note: because ‘BALL::MMFF94ESParameters’ has user-provided ‘const BALL::MMFF94ESParameters& BALL::MMFF94ESParameters::operator=(const BALL::MMFF94ESParameters&)’ 539 | const MMFF94ESParameters& operator = (const MMFF94ESParameters& param) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In copy constructor ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’: /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:525:27: warning: implicitly-declared ‘constexpr BALL::MMFF94ParametersBase::MMFF94ParametersBase(const BALL::MMFF94ParametersBase&)’ is deprecated [-Wdeprecated-copy] 525 | class BALL_EXPORT MMFF94ESParameters | ^~~~~~~~~~~~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:52:45: note: because ‘BALL::MMFF94ParametersBase’ has user-provided ‘const BALL::MMFF94ParametersBase& BALL::MMFF94ParametersBase::operator=(const BALL::MMFF94ParametersBase&)’ 52 | const MMFF94ParametersBase& operator = (const MMFF94ParametersBase&) | ^~~~~~~~ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h: In member function ‘virtual void* BALL::MMFF94ESParameters::create(bool, bool) const’: /<>/include/BALL/COMMON/create.h:73:52: note: synthesized method ‘BALL::MMFF94ESParameters::MMFF94ESParameters(const BALL::MMFF94ESParameters&)’ first required here 73 | ptr = (void*)new name(*this);\ | ^ /<>/include/BALL/MOLMEC/MMFF94/MMFF94Parameters.h:530:17: note: in expansion of macro ‘BALL_CREATE’ 530 | BALL_CREATE(MMFF94ESParameters) | ^~~~~~~~~~~ make[5]: *** [CMakeFiles/VIEW.dir/build.make:297: CMakeFiles/VIEW.dir/VIEW_autogen/mocs_compilation.cpp.o] Error 1 make[5]: Leaving directory '/<>/build' make[4]: *** [CMakeFiles/Makefile2:1975: CMakeFiles/VIEW.dir/all] Error 2 make[4]: Leaving directory '/<>/build' make[3]: *** [CMakeFiles/Makefile2:1982: CMakeFiles/VIEW.dir/rule] Error 2 make[3]: Leaving directory '/<>/build' make[2]: *** [Makefile:195: VIEW] Error 2 make[2]: Leaving directory '/<>/build' make[1]: *** [debian/rules:64: override_dh_auto_build-arch] Error 2 make[1]: Leaving directory '/<>' make: *** [debian/rules:18: binary-arch] Error 2 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2024-04-10T23:27:24Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: armhf Build Type: any Build-Space: 1063460 Build-Time: 5404 Distribution: noble-proposed Fail-Stage: build Host Architecture: armhf Install-Time: 117 Job: ball_1.5.0+git20180813.37fc53c-11build5.dsc Machine Architecture: arm64 Package: ball Package-Time: 5529 Source-Version: 1.5.0+git20180813.37fc53c-11build5 Space: 1063460 Status: attempted Version: 1.5.0+git20180813.37fc53c-11build5 -------------------------------------------------------------------------------- Finished at 2024-04-10T23:27:24Z Build needed 01:32:09, 1063460k disk space E: Build failure (dpkg-buildpackage died) RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=noble --arch=armhf PACKAGEBUILD-27972628 Scanning for processes to kill in build PACKAGEBUILD-27972628