RUN: /usr/share/launchpad-buildd/slavebin/slave-prep ['slave-prep'] Forking launchpad-buildd slave process... Kernel version: Linux postal01 3.13.0-16-generic #36-Ubuntu SMP Tue Mar 4 23:03:28 UTC 2014 ppc64le Buildd toolchain package versions: launchpad-buildd_121~0.IS.08.04.0 python-lpbuildd_121~0.IS.08.04.0 dpkg-dev_1.17.5ubuntu5. Syncing the system clock with the buildd NTP service... 13 Mar 14:43:55 ntpdate[27973]: adjust time server 10.211.37.1 offset -0.000011 sec RUN: /usr/share/launchpad-buildd/slavebin/unpack-chroot ['unpack-chroot', 'PACKAGEBUILD-5709121', '/home/buildd/filecache-default/aabc9cb3b8af7e262bbf6bfae32b9f7021db16d4'] Unpacking chroot for build PACKAGEBUILD-5709121 RUN: /usr/share/launchpad-buildd/slavebin/mount-chroot ['mount-chroot', 'PACKAGEBUILD-5709121'] Mounting chroot for build PACKAGEBUILD-5709121 RUN: /usr/share/launchpad-buildd/slavebin/override-sources-list ['override-sources-list', 'PACKAGEBUILD-5709121', 'deb http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu trusty main restricted universe multiverse', 'deb http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu trusty main', 'deb http://ftpmaster.internal/ubuntu trusty main restricted universe multiverse'] Overriding sources.list in build-PACKAGEBUILD-5709121 RUN: /usr/share/launchpad-buildd/slavebin/update-debian-chroot ['update-debian-chroot', 'PACKAGEBUILD-5709121', 'ppc64el'] Updating debian chroot for build PACKAGEBUILD-5709121 Ign http://ftpmaster.internal trusty InRelease Ign http://ppa.launchpad.net trusty InRelease Ign http://archive-team.internal trusty InRelease Ign http://rebuild-test.internal trusty InRelease Get:1 http://ftpmaster.internal trusty Release.gpg [933 B] Get:2 http://ppa.launchpad.net trusty Release.gpg [316 B] Ign http://archive-team.internal trusty Release.gpg Ign http://rebuild-test.internal trusty Release.gpg Hit http://archive-team.internal trusty Release Get:3 http://rebuild-test.internal trusty Release [58.5 kB] Get:4 http://ppa.launchpad.net trusty Release [14.0 kB] Get:5 http://ftpmaster.internal trusty Release [58.5 kB] Ign http://ppa.launchpad.net trusty Release Ign http://archive-team.internal trusty/main ppc64el Packages/DiffIndex Get:6 http://ppa.launchpad.net trusty/main ppc64el Packages [11.8 kB] Get:7 http://ftpmaster.internal trusty/main ppc64el Packages [1237 kB] Get:8 http://rebuild-test.internal trusty/main ppc64el Packages [1115 kB] Ign http://ppa.launchpad.net trusty/main Translation-en Ign http://archive-team.internal trusty/main Translation-en Hit http://archive-team.internal trusty/main ppc64el Packages Get:9 http://rebuild-test.internal trusty/restricted ppc64el Packages [14 B] Get:10 http://rebuild-test.internal trusty/universe ppc64el Packages [2957 kB] Get:11 http://ftpmaster.internal trusty/restricted ppc64el Packages [14 B] Get:12 http://ftpmaster.internal trusty/universe ppc64el Packages [5066 kB] Get:13 http://rebuild-test.internal trusty/multiverse ppc64el Packages [2991 B] Get:14 http://rebuild-test.internal trusty/main Translation-en [726 kB] Get:15 http://rebuild-test.internal trusty/multiverse Translation-en [3414 B] Get:16 http://rebuild-test.internal trusty/restricted Translation-en [3457 B] Get:17 http://rebuild-test.internal trusty/universe Translation-en [2286 kB] Get:18 http://ftpmaster.internal trusty/multiverse ppc64el Packages [107 kB] Get:19 http://ftpmaster.internal trusty/main Translation-en [767 kB] Get:20 http://ftpmaster.internal trusty/multiverse Translation-en [101 kB] Get:21 http://ftpmaster.internal trusty/restricted Translation-en [3457 B] Get:22 http://ftpmaster.internal trusty/universe Translation-en [4051 kB] Fetched 18.6 MB in 9s (1879 kB/s) Reading package lists... W: GPG error: http://ppa.launchpad.net trusty Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 1E9377A2BA9EF27F Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libtasn1-3 Use 'apt-get autoremove' to remove it. The following NEW packages will be installed: libtasn1-6 The following packages will be upgraded: apt apt-transport-https base-files bash binutils bsdutils cpp-4.8 dpkg dpkg-dev g++-4.8 gcc-4.8 gcc-4.8-base gcc-4.9-base gnupg gpgv initramfs-tools initramfs-tools-bin initscripts libapt-pkg4.12 libatomic1 libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcloog-isl4 libdpkg-perl libgcc-4.8-dev libgcc1 libgnutls26 libgomp1 libitm1 libmount1 libp11-kit0 libreadline6 libsqlite3-0 libstdc++-4.8-dev libstdc++6 libudev1 libuuid1 linux-libc-dev mount multiarch-support pkg-create-dbgsym policyrcd-script-zg2 readline-common sysv-rc sysvinit-utils tzdata udev upstart util-linux 52 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 36.9 MB of archives. After this operation, 182 kB of additional disk space will be used. WARNING: The following packages cannot be authenticated! base-files bash dpkg libc6-dev libc-dev-bin libc-bin udev libudev1 gcc-4.9-base libgcc1 libc6 libitm1 libgomp1 libatomic1 libcloog-isl4 g++-4.8 gcc-4.8 cpp-4.8 libstdc++-4.8-dev binutils libgcc-4.8-dev gcc-4.8-base libstdc++6 libapt-pkg4.12 readline-common libreadline6 gpgv gnupg apt libp11-kit0 libtasn1-6 libgnutls26 libsqlite3-0 multiarch-support initramfs-tools initramfs-tools-bin apt-transport-https dpkg-dev libdpkg-perl policyrcd-script-zg2 Authentication warning overridden. Get:1 http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu/ trusty/main libc6-dev ppc64el 2.19-0ubuntu3~ppa1 [1949 kB] Get:2 http://ftpmaster.internal/ubuntu/ trusty/main mount ppc64el 2.20.1-5.1ubuntu16 [114 kB] Get:3 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main base-files ppc64el 7.2ubuntu4 [61.2 kB] Get:4 http://ftpmaster.internal/ubuntu/ trusty/main tzdata all 2014a-1 [180 kB] Get:5 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main bash ppc64el 4.3-2ubuntu1 [608 kB] Get:6 http://ftpmaster.internal/ubuntu/ trusty/main linux-libc-dev ppc64el 3.13.0-17.37 [760 kB] Get:7 http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu/ trusty/main libc-dev-bin ppc64el 2.19-0ubuntu3~ppa1 [66.3 kB] Get:8 http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu/ trusty/main libc-bin ppc64el 2.19-0ubuntu3~ppa1 [1158 kB] Get:9 http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu/ trusty/main libc6 ppc64el 2.19-0ubuntu3~ppa1 [4420 kB] Get:10 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main dpkg ppc64el 1.17.5ubuntu5 [1977 kB] Get:11 http://ftpmaster.internal/ubuntu/ trusty/main sysv-rc all 2.88dsf-41ubuntu6 [36.5 kB] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main initscripts ppc64el 2.88dsf-41ubuntu6 [27.6 kB] Get:13 http://ftpmaster.internal/ubuntu/ trusty/main libuuid1 ppc64el 2.20.1-5.1ubuntu16 [11.5 kB] Get:14 http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu/ trusty/main libitm1 ppc64el 4.8.2-16ubuntu6x1 [28.9 kB] Get:15 http://ftpmaster.internal/ubuntu/ trusty/main libblkid1 ppc64el 2.20.1-5.1ubuntu16 [60.6 kB] Get:16 http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu/ trusty/main libgomp1 ppc64el 4.8.2-16ubuntu6x1 [22.0 kB] Get:17 http://ftpmaster.internal/ubuntu/ trusty/main sysvinit-utils ppc64el 2.88dsf-41ubuntu6 [51.8 kB] Get:18 http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu/ trusty/main libatomic1 ppc64el 4.8.2-16ubuntu6x1 [7888 B] Get:19 http://ftpmaster.internal/ubuntu/ trusty/main upstart ppc64el 1.12.1-0ubuntu1 [339 kB] Get:20 http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu/ trusty/main g++-4.8 ppc64el 4.8.2-16ubuntu6x1 [6200 kB] Get:21 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main udev ppc64el 204-5ubuntu13 [721 kB] Get:22 http://ftpmaster.internal/ubuntu/ trusty/main util-linux ppc64el 2.20.1-5.1ubuntu16 [455 kB] Get:23 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libudev1 ppc64el 204-5ubuntu13 [32.8 kB] Get:24 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main gcc-4.9-base ppc64el 4.9-20140303-0ubuntu3 [14.0 kB] Get:25 http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu/ trusty/main gcc-4.8 ppc64el 4.8.2-16ubuntu6x1 [4834 kB] Get:26 http://ftpmaster.internal/ubuntu/ trusty/main bsdutils ppc64el 1:2.20.1-5.1ubuntu16 [33.2 kB] Get:27 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libgcc1 ppc64el 1:4.9-20140303-0ubuntu3 [28.9 kB] Get:28 http://ftpmaster.internal/ubuntu/ trusty/main libmount1 ppc64el 2.20.1-5.1ubuntu16 [53.3 kB] Get:29 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libcloog-isl4 ppc64el 0.18.2-1 [57.1 kB] Get:30 http://ftpmaster.internal/ubuntu/ trusty/main pkg-create-dbgsym all 0.64 [7564 B] Get:31 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main binutils ppc64el 2.24-4ubuntu1 [2240 kB] Get:32 http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu/ trusty/main cpp-4.8 ppc64el 4.8.2-16ubuntu6x1 [4427 kB] Get:33 http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu/ trusty/main libstdc++-4.8-dev ppc64el 4.8.2-16ubuntu6x1 [1087 kB] Get:34 http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu/ trusty/main libgcc-4.8-dev ppc64el 4.8.2-16ubuntu6x1 [245 kB] Get:35 http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu/ trusty/main gcc-4.8-base ppc64el 4.8.2-16ubuntu6x1 [15.2 kB] Get:36 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libapt-pkg4.12 ppc64el 0.9.15.4ubuntu2 [622 kB] Get:37 http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu/ trusty/main libstdc++6 ppc64el 4.8.2-16ubuntu6x1 [270 kB] Get:38 http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu/ trusty/main multiarch-support ppc64el 2.19-0ubuntu3~ppa1 [4488 B] Get:39 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main readline-common all 6.3-1ubuntu1 [51.2 kB] Get:40 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libreadline6 ppc64el 6.3-1ubuntu1 [113 kB] Get:41 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main gpgv ppc64el 1.4.16-1ubuntu2 [167 kB] Get:42 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main gnupg ppc64el 1.4.16-1ubuntu2 [637 kB] Get:43 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main apt ppc64el 0.9.15.4ubuntu2 [957 kB] Get:44 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libp11-kit0 ppc64el 0.20.2-1ubuntu2 [75.4 kB] Get:45 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libtasn1-6 ppc64el 3.4-3 [42.6 kB] Get:46 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libgnutls26 ppc64el 2.12.23-12ubuntu2 [358 kB] Get:47 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libsqlite3-0 ppc64el 3.8.2-1ubuntu2 [315 kB] Get:48 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main initramfs-tools all 0.103ubuntu4 [44.2 kB] Get:49 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main initramfs-tools-bin ppc64el 0.103ubuntu4 [8638 B] Get:50 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main apt-transport-https ppc64el 0.9.15.4ubuntu2 [24.8 kB] Get:51 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main dpkg-dev all 1.17.5ubuntu5 [726 kB] Get:52 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libdpkg-perl all 1.17.5ubuntu5 [178 kB] Get:53 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main policyrcd-script-zg2 all 0.1-2 [5232 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 36.9 MB in 5s (6472 kB/s) (Reading database ... 11636 files and directories currently installed.) Preparing to unpack .../base-files_7.2ubuntu4_ppc64el.deb ... Unpacking base-files (7.2ubuntu4) over (7.2ubuntu3) ... Setting up base-files (7.2ubuntu4) ... (Reading database ... 11636 files and directories currently installed.) Preparing to unpack .../bash_4.3-2ubuntu1_ppc64el.deb ... Unpacking bash (4.3-2ubuntu1) over (4.2-5ubuntu3) ... Setting up bash (4.3-2ubuntu1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 11637 files and directories currently installed.) Preparing to unpack .../dpkg_1.17.5ubuntu5_ppc64el.deb ... Unpacking dpkg (1.17.5ubuntu5) over (1.17.5ubuntu4) ... Setting up dpkg (1.17.5ubuntu5) ... (Reading database ... 11637 files and directories currently installed.) Preparing to unpack .../mount_2.20.1-5.1ubuntu16_ppc64el.deb ... Unpacking mount (2.20.1-5.1ubuntu16) over (2.20.1-5.1ubuntu14) ... Setting up mount (2.20.1-5.1ubuntu16) ... (Reading database ... 11637 files and directories currently installed.) Preparing to unpack .../tzdata_2014a-1_all.deb ... Unpacking tzdata (2014a-1) over (2013i-1) ... Setting up tzdata (2014a-1) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Mar 13 18:44:15 UTC 2014. Universal Time is now: Thu Mar 13 18:44:15 UTC 2014. Run 'dpkg-reconfigure tzdata' if you wish to change it. (Reading database ... 11637 files and directories currently installed.) Preparing to unpack .../libc6-dev_2.19-0ubuntu3~ppa1_ppc64el.deb ... Unpacking libc6-dev:ppc64el (2.19-0ubuntu3~ppa1) over (2.19-0ubuntu2) ... Preparing to unpack .../libc-dev-bin_2.19-0ubuntu3~ppa1_ppc64el.deb ... Unpacking libc-dev-bin (2.19-0ubuntu3~ppa1) over (2.19-0ubuntu2) ... Preparing to unpack .../linux-libc-dev_3.13.0-17.37_ppc64el.deb ... Unpacking linux-libc-dev:ppc64el (3.13.0-17.37) over (3.13.0-12.32) ... Preparing to unpack .../libc-bin_2.19-0ubuntu3~ppa1_ppc64el.deb ... 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Setting up gcc-4.8 (4.8.2-16ubuntu6x1) ... Setting up libstdc++-4.8-dev:ppc64el (4.8.2-16ubuntu6x1) ... Setting up g++-4.8 (4.8.2-16ubuntu6x1) ... Setting up libp11-kit0:ppc64el (0.20.2-1ubuntu2) ... Setting up libtasn1-6:ppc64el (3.4-3) ... Setting up libgnutls26:ppc64el (2.12.23-12ubuntu2) ... Setting up libsqlite3-0:ppc64el (3.8.2-1ubuntu2) ... Setting up initramfs-tools-bin (0.103ubuntu4) ... Setting up initramfs-tools (0.103ubuntu4) ... update-initramfs: deferring update (trigger activated) Setting up apt-transport-https (0.9.15.4ubuntu2) ... Setting up libdpkg-perl (1.17.5ubuntu5) ... Setting up dpkg-dev (1.17.5ubuntu5) ... Setting up pkg-create-dbgsym (0.64) ... Setting up policyrcd-script-zg2 (0.1-2) ... Setting up upstart (1.12.1-0ubuntu1) ... Installing new version of config file /etc/init/wait-for-state.conf ... Setting up initscripts (2.88dsf-41ubuntu6) ... Processing triggers for libc-bin (2.19-0ubuntu3~ppa1) ... Processing triggers for initramfs-tools (0.103ubuntu4) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package ['sbuild-package', 'PACKAGEBUILD-5709121', 'ppc64el', 'trusty', '--nolog', '--batch', '--archive=ubuntu', '--dist=trusty', '--purpose=COPY', '--architecture=ppc64el', '--comp=multiverse', 'mgltools-sff_1.5.7~rc1~cvs.20130519-2.dsc'] Initiating build PACKAGEBUILD-5709121 with 8 jobs across 8 processor cores. Kernel reported to sbuild: 3.13.0-16-generic #36-Ubuntu SMP Tue Mar 4 23:03:28 UTC 2014 ppc64le Automatic build of mgltools-sff_1.5.7~rc1~cvs.20130519-2 on postal01 by sbuild/ppc64el 1.170.5 Build started at 20140313-1444 ****************************************************************************** mgltools-sff_1.5.7~rc1~cvs.20130519-2.dsc exists in cwd ** Using build dependencies supplied by package: Build-Depends: debhelper (>= 8), python-all-dev (>= 2.6), swig (>= 1.3.20), python-numpy, mgltools-bhtree Checking for already installed source dependencies... debhelper: missing python-all-dev: missing swig: missing python-numpy: missing mgltools-bhtree: missing Checking for source dependency conflicts... /usr/bin/sudo /usr/bin/apt-get --purge $CHROOT_OPTIONS -q -y install debhelper python-all-dev swig python-numpy mgltools-bhtree Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libtasn1-3 Use 'apt-get autoremove' to remove it. The following extra packages will be installed: apparmor-easyprof bsdmainutils dh-apparmor dh-python file gettext gettext-base groff-base intltool-debian libasprintf0c2 libblas3 libcroco3 libexpat1 libexpat1-dev libgfortran3 libglib2.0-0 liblapack3 libmagic1 libmpdec2 libpipeline1 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.4-minimal libpython3.4-stdlib libunistring0 libxml2 man-db mime-support po-debconf python python-all python-dev python-minimal python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.4 python3.4-minimal swig2.0 Suggested packages: wamerican wordlist whois vacation dh-make gettext-doc groff less www-browser libmail-box-perl python-doc python-tk gfortran python-nose python-numpy-dbg python-numpy-doc python2.7-doc binfmt-support python3-doc python3-tk python3.4-doc swig-doc swig-examples swig2.0-examples swig2.0-doc Recommended packages: curl wget lynx-cur libasprintf-dev libgettextpo-dev libglib2.0-data shared-mime-info xml-core libmail-sendmail-perl The following NEW packages will be installed: apparmor-easyprof bsdmainutils debhelper dh-apparmor dh-python file gettext gettext-base groff-base intltool-debian libasprintf0c2 libblas3 libcroco3 libexpat1 libexpat1-dev libgfortran3 libglib2.0-0 liblapack3 libmagic1 libmpdec2 libpipeline1 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-stdlib libpython3.4-minimal libpython3.4-stdlib libunistring0 libxml2 man-db mgltools-bhtree mime-support po-debconf python python-all python-all-dev python-dev python-minimal python-numpy python2.7 python2.7-dev python2.7-minimal python3 python3-minimal python3.4 python3.4-minimal swig swig2.0 0 upgraded, 52 newly installed, 0 to remove and 0 not upgraded. Need to get 20.8 MB of archives. After this operation, 102 MB of additional disk space will be used. WARNING: The following packages cannot be authenticated! libexpat1 libmagic1 mime-support libmpdec2 libasprintf0c2 libglib2.0-0 libpipeline1 libxml2 groff-base bsdmainutils man-db libcroco3 libgfortran3 libpython2.7-minimal libpython2.7-stdlib libpython2.7 libexpat1-dev libpython2.7-dev libunistring0 python2.7-minimal python3-minimal libpython3-stdlib python3 file gettext-base gettext intltool-debian po-debconf apparmor-easyprof dh-apparmor debhelper libblas3 liblapack3 libpython-dev libpython-all-dev libpython-stdlib python2.7 python-minimal python python-numpy python-all python2.7-dev python-dev python-all-dev swig2.0 swig Authentication warning overridden. Get:1 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.4-minimal ppc64el 3.4~rc3-0ubuntu1 [441 kB] Get:2 http://ppa.launchpad.net/ubuntu-toolchain-r/aarch64/ubuntu/ trusty/main libgfortran3 ppc64el 4.8.2-16ubuntu6x1 [198 kB] Get:3 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libexpat1 ppc64el 2.1.0-4ubuntu1 [80.1 kB] Get:4 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libmagic1 ppc64el 1:5.14-2ubuntu2 [194 kB] Get:5 http://ftpmaster.internal/ubuntu/ trusty/main libpython3.4-stdlib ppc64el 3.4~rc3-0ubuntu1 [1974 kB] Get:6 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main mime-support all 3.54ubuntu1 [29.3 kB] Get:7 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libmpdec2 ppc64el 2.4.0-6 [83.9 kB] Get:8 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libasprintf0c2 ppc64el 0.18.3.1-1ubuntu2 [6742 B] Get:9 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libglib2.0-0 ppc64el 2.39.91-0ubuntu2 [996 kB] Get:10 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libpipeline1 ppc64el 1.2.6-2 [22.6 kB] Get:11 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libxml2 ppc64el 2.9.1+dfsg1-3ubuntu4 [601 kB] Get:12 http://ftpmaster.internal/ubuntu/ trusty/main python3.4-minimal ppc64el 3.4~rc3-0ubuntu1 [1145 kB] Get:13 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main groff-base ppc64el 1.22.2-5 [1249 kB] Get:14 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main bsdmainutils ppc64el 9.0.5ubuntu1 [173 kB] Get:15 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main man-db ppc64el 2.6.6-1 [846 kB] Get:16 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libcroco3 ppc64el 0.6.8-2ubuntu1 [75.5 kB] Get:17 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ppc64el 3.4~rc1-1 [23.3 kB] Get:25 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libpython3-stdlib ppc64el 3.4~rc1-1 [6970 B] Get:26 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main python3 ppc64el 3.4~rc1-1 [8660 B] Get:27 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main file ppc64el 1:5.14-2ubuntu2 [19.3 kB] Get:28 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main gettext-base ppc64el 0.18.3.1-1ubuntu2 [47.2 kB] Get:29 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main gettext ppc64el 0.18.3.1-1ubuntu2 [840 kB] Get:30 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main intltool-debian all 0.35.0+20060710.1 [24.6 kB] Get:31 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main po-debconf all 1.0.16+nmu2ubuntu1 [207 kB] Get:32 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main apparmor-easyprof all 2.8.0-0ubuntu38 [20.0 kB] Get:33 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main dh-apparmor all 2.8.0-0ubuntu38 [7310 B] Get:34 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main debhelper all 9.20131227ubuntu1 [603 kB] Get:35 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libblas3 ppc64el 1.2.20110419-7 [141 kB] Get:36 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main liblapack3 ppc64el 3.5.0-2ubuntu1 [1445 kB] Get:37 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libpython-dev ppc64el 2.7.5-5ubuntu3 [7092 B] Get:38 http://ftpmaster.internal/ubuntu/ trusty/main python3.4 ppc64el 3.4~rc3-0ubuntu1 [160 kB] Get:39 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libpython-all-dev ppc64el 2.7.5-5ubuntu3 [998 B] Get:40 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main libpython-stdlib ppc64el 2.7.5-5ubuntu3 [7020 B] Get:41 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main python2.7 ppc64el 2.7.6-7 [194 kB] Get:42 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main python-minimal ppc64el 2.7.5-5ubuntu3 [27.6 kB] Get:43 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main python ppc64el 2.7.5-5ubuntu3 [133 kB] Get:44 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main python-numpy ppc64el 1:1.8.0+git20140126-0ubuntu2 [1512 kB] Get:45 http://ftpmaster.internal/ubuntu/ trusty/main dh-python all 1.20140128-1ubuntu4 [50.9 kB] Get:46 http://ftpmaster.internal/ubuntu/ trusty/multiverse mgltools-bhtree ppc64el 1.5.7~rc1~cvs.20130519-1 [48.8 kB] Get:47 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main python-all ppc64el 2.7.5-5ubuntu3 [980 B] Get:48 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main python2.7-dev ppc64el 2.7.6-7 [269 kB] Get:49 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main python-dev ppc64el 2.7.5-5ubuntu3 [1180 B] Get:50 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main python-all-dev ppc64el 2.7.5-5ubuntu3 [1004 B] Get:51 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main swig2.0 ppc64el 2.0.11-1ubuntu2 [900 kB] Get:52 http://rebuild-test.internal/ubuntu-test-rebuild-20140307/ubuntu/ trusty/main swig ppc64el 2.0.11-1ubuntu2 [6282 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 20.8 MB in 8s (2320 kB/s) Selecting previously unselected package libexpat1:ppc64el. (Reading database ... 11648 files and directories currently installed.) Preparing to unpack .../libexpat1_2.1.0-4ubuntu1_ppc64el.deb ... Unpacking libexpat1:ppc64el (2.1.0-4ubuntu1) ... Selecting previously unselected package libmagic1:ppc64el. Preparing to unpack .../libmagic1_1%3a5.14-2ubuntu2_ppc64el.deb ... Unpacking libmagic1:ppc64el (1:5.14-2ubuntu2) ... Selecting previously unselected package libpython3.4-minimal:ppc64el. Preparing to unpack .../libpython3.4-minimal_3.4~rc3-0ubuntu1_ppc64el.deb ... Unpacking libpython3.4-minimal:ppc64el (3.4~rc3-0ubuntu1) ... Selecting previously unselected package mime-support. Preparing to unpack .../mime-support_3.54ubuntu1_all.deb ... Unpacking mime-support (3.54ubuntu1) ... Selecting previously unselected package libmpdec2:ppc64el. Preparing to unpack .../libmpdec2_2.4.0-6_ppc64el.deb ... Unpacking libmpdec2:ppc64el (2.4.0-6) ... Selecting previously unselected package libpython3.4-stdlib:ppc64el. 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Unpacking libpython2.7-minimal:ppc64el (2.7.6-7) ... Selecting previously unselected package libpython2.7-stdlib:ppc64el. Preparing to unpack .../libpython2.7-stdlib_2.7.6-7_ppc64el.deb ... Unpacking libpython2.7-stdlib:ppc64el (2.7.6-7) ... Selecting previously unselected package libpython2.7:ppc64el. Preparing to unpack .../libpython2.7_2.7.6-7_ppc64el.deb ... Unpacking libpython2.7:ppc64el (2.7.6-7) ... Selecting previously unselected package libexpat1-dev:ppc64el. Preparing to unpack .../libexpat1-dev_2.1.0-4ubuntu1_ppc64el.deb ... Unpacking libexpat1-dev:ppc64el (2.1.0-4ubuntu1) ... Selecting previously unselected package libpython2.7-dev:ppc64el. Preparing to unpack .../libpython2.7-dev_2.7.6-7_ppc64el.deb ... Unpacking libpython2.7-dev:ppc64el (2.7.6-7) ... Selecting previously unselected package libunistring0:ppc64el. Preparing to unpack .../libunistring0_0.9.3-5ubuntu3_ppc64el.deb ... Unpacking libunistring0:ppc64el (0.9.3-5ubuntu3) ... 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Unpacking libpython-all-dev:ppc64el (2.7.5-5ubuntu3) ... Selecting previously unselected package libpython-stdlib:ppc64el. Preparing to unpack .../libpython-stdlib_2.7.5-5ubuntu3_ppc64el.deb ... Unpacking libpython-stdlib:ppc64el (2.7.5-5ubuntu3) ... Selecting previously unselected package python2.7. Preparing to unpack .../python2.7_2.7.6-7_ppc64el.deb ... Unpacking python2.7 (2.7.6-7) ... Selecting previously unselected package python-minimal. Preparing to unpack .../python-minimal_2.7.5-5ubuntu3_ppc64el.deb ... Unpacking python-minimal (2.7.5-5ubuntu3) ... Selecting previously unselected package python. Preparing to unpack .../python_2.7.5-5ubuntu3_ppc64el.deb ... Unpacking python (2.7.5-5ubuntu3) ... Selecting previously unselected package python-numpy. Preparing to unpack .../python-numpy_1%3a1.8.0+git20140126-0ubuntu2_ppc64el.deb ... Unpacking python-numpy (1:1.8.0+git20140126-0ubuntu2) ... Selecting previously unselected package mgltools-bhtree. 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Preparing to unpack .../swig_2.0.11-1ubuntu2_ppc64el.deb ... Unpacking swig (2.0.11-1ubuntu2) ... Setting up libexpat1:ppc64el (2.1.0-4ubuntu1) ... Setting up libmagic1:ppc64el (1:5.14-2ubuntu2) ... Setting up libpython3.4-minimal:ppc64el (3.4~rc3-0ubuntu1) ... Setting up mime-support (3.54ubuntu1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode Setting up libmpdec2:ppc64el (2.4.0-6) ... Setting up libpython3.4-stdlib:ppc64el (3.4~rc3-0ubuntu1) ... Setting up python3.4-minimal (3.4~rc3-0ubuntu1) ... Setting up libasprintf0c2:ppc64el (0.18.3.1-1ubuntu2) ... Setting up libglib2.0-0:ppc64el (2.39.91-0ubuntu2) ... No schema files found: doing nothing. Setting up libpipeline1:ppc64el (1.2.6-2) ... Setting up libxml2:ppc64el (2.9.1+dfsg1-3ubuntu4) ... Setting up groff-base (1.22.2-5) ... Setting up bsdmainutils (9.0.5ubuntu1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up man-db (2.6.6-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcroco3:ppc64el (0.6.8-2ubuntu1) ... Setting up libgfortran3:ppc64el (4.8.2-16ubuntu6x1) ... Setting up libpython2.7-minimal:ppc64el (2.7.6-7) ... Setting up libpython2.7-stdlib:ppc64el (2.7.6-7) ... Setting up libpython2.7:ppc64el (2.7.6-7) ... Setting up libexpat1-dev:ppc64el (2.1.0-4ubuntu1) ... Setting up libpython2.7-dev:ppc64el (2.7.6-7) ... Setting up libunistring0:ppc64el (0.9.3-5ubuntu3) ... Setting up python2.7-minimal (2.7.6-7) ... Linking and byte-compiling packages for runtime python2.7... Setting up python3.4 (3.4~rc3-0ubuntu1) ... Setting up python3-minimal (3.4~rc1-1) ... Setting up libpython3-stdlib:ppc64el (3.4~rc1-1) ... Setting up file (1:5.14-2ubuntu2) ... Setting up gettext-base (0.18.3.1-1ubuntu2) ... Setting up gettext (0.18.3.1-1ubuntu2) ... Setting up intltool-debian (0.35.0+20060710.1) ... Setting up po-debconf (1.0.16+nmu2ubuntu1) ... Setting up libblas3 (1.2.20110419-7) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up liblapack3 (3.5.0-2ubuntu1) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up libpython-dev:ppc64el (2.7.5-5ubuntu3) ... Setting up libpython-all-dev:ppc64el (2.7.5-5ubuntu3) ... Setting up libpython-stdlib:ppc64el (2.7.5-5ubuntu3) ... Setting up python2.7 (2.7.6-7) ... Setting up python-minimal (2.7.5-5ubuntu3) ... Setting up python (2.7.5-5ubuntu3) ... Setting up python-numpy (1:1.8.0+git20140126-0ubuntu2) ... Setting up mgltools-bhtree (1.5.7~rc1~cvs.20130519-1) ... Setting up python-all (2.7.5-5ubuntu3) ... Setting up python2.7-dev (2.7.6-7) ... Setting up python-dev (2.7.5-5ubuntu3) ... Setting up python-all-dev (2.7.5-5ubuntu3) ... Setting up swig2.0 (2.0.11-1ubuntu2) ... Setting up swig (2.0.11-1ubuntu2) ... Setting up python3 (3.4~rc1-1) ... running python rtupdate hooks for python3.4... running python post-rtupdate hooks for python3.4... Setting up dh-python (1.20140128-1ubuntu4) ... Setting up apparmor-easyprof (2.8.0-0ubuntu38) ... Setting up dh-apparmor (2.8.0-0ubuntu38) ... Setting up debhelper (9.20131227ubuntu1) ... Processing triggers for libc-bin (2.19-0ubuntu3~ppa1) ... Checking correctness of source dependencies... Toolchain package versions: libc6-dev_2.19-0ubuntu3~ppa1 make_3.81-8.2ubuntu3 dpkg-dev_1.17.5ubuntu5 gcc-4.8_4.8.2-16ubuntu6x1 g++-4.8_4.8.2-16ubuntu6x1 binutils_2.24-4ubuntu1 libstdc++-4.8-dev_4.8.2-16ubuntu6x1 libstdc++6_4.8.2-16ubuntu6x1 ------------------------------------------------------------------------------ dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::Quilt gpgv: Signature made Sat Aug 3 15:08:07 2013 UTC using DSA key ID 54B99890 gpgv: Can't check signature: public key not found dpkg-source: warning: failed to verify signature on ./mgltools-sff_1.5.7~rc1~cvs.20130519-2.dsc dpkg-source: info: extracting mgltools-sff in mgltools-sff-1.5.7~rc1~cvs.20130519 dpkg-source: info: unpacking mgltools-sff_1.5.7~rc1~cvs.20130519.orig.tar.gz dpkg-source: info: unpacking mgltools-sff_1.5.7~rc1~cvs.20130519-2.debian.tar.gz dpkg-buildpackage: source package mgltools-sff dpkg-buildpackage: source version 1.5.7~rc1~cvs.20130519-2 dpkg-buildpackage: source distribution unstable dpkg-source --before-build mgltools-sff-1.5.7~rc1~cvs.20130519 dpkg-buildpackage: host architecture ppc64el /usr/bin/fakeroot debian/rules clean dh clean --with python2 dh_testdir dh_auto_clean running clean 'build/lib.linux-ppc64le-2.7' does not exist -- can't clean it 'build/bdist.linux-ppc64le' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it debian/rules override_dh_clean make[1]: Entering directory `/build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519' dh_clean find . -name CVS -a -type d| xargs -r rm -r rm -rf build build-stamp debian/Pmv make[1]: Leaving directory `/build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519' debian/rules build-arch dh build-arch --with python2 dh_testdir -a dh_auto_configure -a dh_auto_build -a running build running build_py creating build creating build/lib.linux-ppc64le-2.7 creating build/lib.linux-ppc64le-2.7/sff copying sff/__init__.py -> build/lib.linux-ppc64le-2.7/sff copying sff/__init__.py -> build/lib.linux-ppc64le-2.7/sff copying sff/amber.py -> build/lib.linux-ppc64le-2.7/sff creating build/lib.linux-ppc64le-2.7/sff/Tests copying sff/Tests/__init__.py -> build/lib.linux-ppc64le-2.7/sff/Tests copying sff/Tests/tripepparmdict.py -> build/lib.linux-ppc64le-2.7/sff/Tests copying sff/Tests/p1H_crd.py -> build/lib.linux-ppc64le-2.7/sff/Tests copying sff/Tests/test_dependencies.py -> build/lib.linux-ppc64le-2.7/sff/Tests copying sff/Tests/test.py -> build/lib.linux-ppc64le-2.7/sff/Tests running build_ext building '_prmlib' extension swigging sff/prmlib.i to sff/prmlib_wrap.c swig -python -o sff/prmlib_wrap.c sff/prmlib.i creating build/temp.linux-ppc64le-2.7 creating build/temp.linux-ppc64le-2.7/src creating build/temp.linux-ppc64le-2.7/sff powerpc64le-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/bhtree.c -o build/temp.linux-ppc64le-2.7/src/bhtree.o src/bhtree.c: In function 'generateBHtree': src/bhtree.c:65:3: warning: implicit declaration of function 'malloc' [-Wimplicit-function-declaration] r=(BHtree *)malloc(sizeof(BHtree)); ^ src/bhtree.c:65:15: warning: incompatible implicit declaration of built-in function 'malloc' [enabled by default] r=(BHtree *)malloc(sizeof(BHtree)); ^ src/bhtree.c: In function 'freeBHtree': src/bhtree.c:176:5: warning: implicit declaration of function 'free' [-Wimplicit-function-declaration] for (i=0;iroot->n;i++) free(tree->atom[i]); ^ src/bhtree.c:176:35: warning: incompatible implicit declaration of built-in function 'free' [enabled by default] for (i=0;iroot->n;i++) free(tree->atom[i]); ^ src/bhtree.c:180:3: warning: incompatible implicit declaration of built-in function 'free' [enabled by default] free(tree); ^ src/bhtree.c: In function 'freeBHnode': src/bhtree.c:189:5: warning: incompatible implicit declaration of built-in function 'free' [enabled by default] free(node); ^ src/bhtree.c: In function 'divideBHnode': src/bhtree.c:230:24: warning: incompatible implicit declaration of built-in function 'malloc' [enabled by default] node->left=(BHnode *)malloc(sizeof(BHnode)); ^ src/bhtree.c: In function 'findBHcloseAtoms': src/bhtree.c:369:9: warning: unused variable 'n' [-Wunused-variable] int i,n; ^ powerpc64le-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/binpos.c -o build/temp.linux-ppc64le-2.7/src/binpos.o In file included from src/binpos.c:2:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ src/binpos.c: In function 'openbinpos': src/binpos.c:15:2: warning: implicit declaration of function 'strcmp' [-Wimplicit-function-declaration] if( strcmp( magic, "fxyz" ) != 0 ){ ^ src/binpos.c: In function 'readbinpos': src/binpos.c:32:2: warning: implicit declaration of function 'strncmp' [-Wimplicit-function-declaration] if( 0 == strncmp( n_atomf,"fxyz",4 ) ) { ^ src/binpos.c:33:8: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result] fread( n_atomf, size, 1, fp ); ^ src/binpos.c:29:11: warning: 'n_atomf' is used uninitialized in this function [-Wuninitialized] if( fread( n_atomf, sizeof( int ), 1, fp ) != 1 ) { ^ powerpc64le-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/memutil.c -o build/temp.linux-ppc64le-2.7/src/memutil.o In file included from src/memutil.c:32:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ src/memutil.c:34:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void nrerror( msg ) ^ src/memutil.c:42:8: warning: function declaration isn't a prototype [-Wstrict-prototypes] float *vector( nl, nh ) ^ src/memutil.c:53:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ivector( nl, nh ) ^ src/memutil.c:64:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ipvector( nl, nh ) ^ src/memutil.c:76:9: warning: function declaration isn't a prototype [-Wstrict-prototypes] float **matrix( nrl, nrh, ncl, nch ) ^ src/memutil.c:104:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] int **imatrix( nrl, nrh, ncl, nch ) ^ src/memutil.c:132:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_vector( v, nl, nh ) ^ src/memutil.c:140:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_ivector( v, nl, nh ) ^ src/memutil.c:158:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_imatrix( m, nrl, nrh, ncl, nch ) ^ src/memutil.c:167:8: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL *Rvector( nl, nh ) ^ src/memutil.c:178:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_Rvector( v, nl, nh ) ^ powerpc64le-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/rand2.c -o build/temp.linux-ppc64le-2.7/src/rand2.o src/rand2.c:55:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] float rand2( idum ) ^ src/rand2.c:96:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] float gauss( mean, sd, idum) ^ powerpc64le-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/conjgrad.c -o build/temp.linux-ppc64le-2.7/src/conjgrad.o In file included from src/conjgrad.c:31:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ In file included from src/conjgrad.c:32:0: src/memutil.h:30:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void nrerror(); ^ src/memutil.h:31:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] float *vector(); ^ src/memutil.h:32:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ivector(); ^ src/memutil.h:33:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ipvector(); ^ src/memutil.h:34:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] float **matrix(); ^ src/memutil.h:35:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int **imatrix(); ^ src/memutil.h:36:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_vector(); ^ src/memutil.h:37:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_ivector(); ^ src/memutil.h:38:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_matrix(); ^ src/memutil.h:39:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_imatrix(); ^ src/conjgrad.c: In function 'conjgrad': src/conjgrad.c:44:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ( *func )(); ^ src/conjgrad.c:153:43: warning: suggest parentheses around '&&' within '||' [-Wparentheses] if (fch < (_REAL)0. || fch == (_REAL)0. && gnew / gmin >= (_REAL)-1.) { ^ src/conjgrad.c:85:22: warning: unused variable 'ivar' [-Wunused-variable] int niter, iobs, ivar, i, nfbeg, iterc, irsdg, igopt; ^ src/conjgrad.c:85:16: warning: unused variable 'iobs' [-Wunused-variable] int niter, iobs, ivar, i, nfbeg, iterc, irsdg, igopt; ^ src/conjgrad.c:84:16: warning: unused variable 'rho' [-Wunused-variable] _REAL fch, rho, sum; ^ src/conjgrad.c:82:23: warning: unused variable 'z' [-Wunused-variable] _REAL step, work, z, finit, ginit, gsqrd, gspln; ^ src/conjgrad.c:81:47: warning: unused variable 'drho' [-Wunused-variable] _REAL calc, gama, beta, fmin, gmin, dfpr, drho, gnew; ^ src/conjgrad.c:81:11: warning: unused variable 'calc' [-Wunused-variable] _REAL calc, gama, beta, fmin, gmin, dfpr, drho, gnew; ^ src/conjgrad.c:243:3: warning: 'iretry' may be used uninitialized in this function [-Wmaybe-uninitialized] ++iretry; ^ src/conjgrad.c:257:30: warning: 'iterrs' may be used uninitialized in this function [-Wmaybe-uninitialized] if (iterrs != 0 && iterc - iterrs < *n && (sum >= 0 ? sum : -sum) < gsqrd * (_REAL).2) { ^ src/conjgrad.c:208:8: warning: 'nfopt' may be used uninitialized in this function [-Wmaybe-uninitialized] if (niter > nfopt) { ^ src/conjgrad.c:220:23: warning: 'nfbeg' may be used uninitialized in this function [-Wmaybe-uninitialized] if (niter > nfbeg + 1) { ^ src/conjgrad.c:206:17: warning: 'fch' may be used uninitialized in this function [-Wmaybe-uninitialized] work = (fch + fch) / stepch - gnew - gmin; ^ src/conjgrad.c:229:22: warning: 'sbound' may be used uninitialized in this function [-Wmaybe-uninitialized] stepch = (sbound - stmin) * (_REAL).5; ^ src/conjgrad.c:206:24: warning: 'stepch' may be used uninitialized in this function [-Wmaybe-uninitialized] work = (fch + fch) / stepch - gnew - gmin; ^ src/conjgrad.c:233:27: warning: 'ddspln' may be used uninitialized in this function [-Wmaybe-uninitialized] gspln = gmin + stepch * ddspln; ^ src/conjgrad.c:265:8: warning: 'gamden' may be used uninitialized in this function [-Wmaybe-uninitialized] gama /= gamden; ^ src/conjgrad.c:229:22: warning: 'stmin' may be used uninitialized in this function [-Wmaybe-uninitialized] stepch = (sbound - stmin) * (_REAL).5; ^ src/conjgrad.c:171:11: warning: 'gsqrd' may be used uninitialized in this function [-Wmaybe-uninitialized] stmin = *dfpred / gsqrd; ^ src/conjgrad.c:221:13: warning: 'ginit' may be used uninitialized in this function [-Wmaybe-uninitialized] if ((r__1 = gmin / ginit, ((r__1) >= 0 ? (r__1) : ^ src/conjgrad.c:250:8: warning: 'finit' may be used uninitialized in this function [-Wmaybe-uninitialized] if (*f < finit) iterfm = iterc; ^ src/conjgrad.c:206:10: warning: 'gmin' may be used uninitialized in this function [-Wmaybe-uninitialized] work = (fch + fch) / stepch - gnew - gmin; ^ src/conjgrad.c:151:7: warning: 'fmin' may be used uninitialized in this function [-Wmaybe-uninitialized] fch = *f - fmin; ^ powerpc64le-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/prm.c -o build/temp.linux-ppc64le-2.7/src/prm.o In file included from src/prm.c:25:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ src/prm.c:32:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] extern int errno; ^ src/prm.c:53:1: warning: return type defaults to 'int' [-Wreturn-type] skipeoln(file) ^ src/prm.c:53:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] src/prm.c:75:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] iscompressed(name) ^ src/prm.c:99:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] genopen(name) ^ src/prm.c:173:1: warning: return type defaults to 'int' [-Wreturn-type] genclose(fileptr, popn) ^ src/prm.c:173:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] src/prm.c:191:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] get(size) ^ src/prm.c:216:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] preadln(file, name, string) ^ src/prm.c: In function 'readparm': src/prm.c:330:28: warning: unused variable 'fld' [-Wunused-variable] char buf[132], fld[20]; ^ src/prm.c:326:47: warning: variable 'atype' set but not used [-Wunused-but-set-variable] int i, k, idum, res, ifpert, iat, kat, lat, atype; ^ src/prm.c: At top level: src/prm.c:875:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] firstwat(prm) ^ src/prm.c: In function 'readcrdvec': src/prm.c:961:15: warning: unused variable 'n' [-Wunused-variable] int i, j, n; ^ src/prm.c: In function 'skipeoln': src/prm.c:64:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ src/prm.c: In function 'genclose': src/prm.c:183:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ src/prm.c: In function 'preadln': src/prm.c:236:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ src/prm.c: In function 'readparm': src/prm.c:351:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(buf, 80, file); ^ src/prm.c:365:7: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result] fgets(buf, 80, file); ^ src/prm.c:395:8: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d %d %d %d", ^ src/prm.c:424:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Charges[i]); ^ src/prm.c:436:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %le", &prm->Masses[i]); ^ src/prm.c:447:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->Iac[i]); ^ src/prm.c:455:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->Iblo[i]); ^ src/prm.c:463:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->Cno[i]); ^ src/prm.c:488:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->Ipres[i]); ^ src/prm.c:498:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Rk[i]); ^ src/prm.c:510:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Req[i]); ^ src/prm.c:522:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Tk[i]); ^ src/prm.c:534:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Teq[i]); ^ src/prm.c:546:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Pk[i]); ^ src/prm.c:558:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Pn[i]); ^ src/prm.c:570:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Phase[i]); ^ src/prm.c:582:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Solty[i]); ^ src/prm.c:595:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Cn1[i]); ^ src/prm.c:608:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->Cn2[i]); ^ src/prm.c:622:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d", ^ src/prm.c:634:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d", ^ src/prm.c:647:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d %d", ^ src/prm.c:661:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d %d", ^ src/prm.c:676:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d %d %d", ^ src/prm.c:691:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d %d %d", ^ src/prm.c:701:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->ExclAt[i]); ^ src/prm.c:710:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->HB12[i]); ^ src/prm.c:722:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &prm->HB10[i]); ^ src/prm.c:735:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf", &H[i]); ^ src/prm.c:762:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->TreeJoin[i]); ^ src/prm.c:772:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->AtomRes[i]); ^ src/prm.c:790:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %d %d", &prm->Iptres, &prm->Nspm, ^ src/prm.c:795:10: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d", &prm->Boundary[i]); ^ src/prm.c:798:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %lf %lf %lf", ^ src/prm.c:817:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result] fscanf(file, " %d %lf %lf %lf %lf", ^ powerpc64le-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c src/sff.c -o build/temp.linux-ppc64le-2.7/src/sff.o In file included from src/sff.c:43:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ In file included from src/sff.c:44:0: src/memutil.h:30:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void nrerror(); ^ src/memutil.h:31:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] float *vector(); ^ src/memutil.h:32:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ivector(); ^ src/memutil.h:33:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int *ipvector(); ^ src/memutil.h:34:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] float **matrix(); ^ src/memutil.h:35:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] int **imatrix(); ^ src/memutil.h:36:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_vector(); ^ src/memutil.h:37:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_ivector(); ^ src/memutil.h:38:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_matrix(); ^ src/memutil.h:39:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void free_imatrix(); ^ src/sff.c:76:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL second() ^ src/sff.c:88:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] float gauss(); /* never double -bsd- */ ^ src/sff.c: In function 'mm_options': src/sff.c:207:11: warning: 'return' with no value, in function returning non-void [-Wreturn-type] if (!c) return; ^ src/sff.c: In function 'md_options': src/sff.c:246:11: warning: 'return' with no value, in function returning non-void [-Wreturn-type] if (!c) return; ^ src/sff.c: At top level: src/sff.c:289:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks() ^ src/sff.c: In function 'mme_init': src/sff.c:311:9: warning: unused variable 'rrad' [-Wunused-variable] _REAL rrad; ^ src/sff.c:310:18: warning: unused variable 'ip2' [-Wunused-variable] int i, j, ip1, ip2, nblimit; ^ src/sff.c:310:13: warning: unused variable 'ip1' [-Wunused-variable] int i, j, ip1, ip2, nblimit; ^ src/sff.c:310:10: warning: unused variable 'j' [-Wunused-variable] int i, j, ip1, ip2, nblimit; ^ src/sff.c: At top level: src/sff.c:417:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL econs( x, f, prm, opts ) ^ src/sff.c:440:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ebond( nbond, a1, a2, atype, Rk, Req, x, f ) ^ src/sff.c:471:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL eangl( nang, a1, a2, a3, atype, Tk, Teq, x, f ) ^ src/sff.c:542:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ephiRes( nphi, a1, a2, a3, a4, atype, Pk, Pn, Phase, x, start, end ) ^ src/sff.c: In function 'ephiRes': src/sff.c:550:44: warning: unused variable 'e3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:41: warning: unused variable 'e2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:38: warning: unused variable 'e1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:35: warning: unused variable 'd3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:32: warning: unused variable 'd2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:29: warning: unused variable 'd1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:550:8: warning: unused variable 'df' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:549:63: warning: variable 'dd4z' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:58: warning: variable 'dd3z' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:53: warning: variable 'dd2z' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:48: warning: variable 'dd1z' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:43: warning: variable 'dd4y' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:38: warning: variable 'dd3y' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:33: warning: variable 'dd2y' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:28: warning: variable 'dd1y' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:23: warning: variable 'dd4x' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:18: warning: variable 'dd3x' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:13: warning: variable 'dd2x' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c:549:8: warning: variable 'dd1x' set but not used [-Wunused-but-set-variable] _REAL dd1x,dd2x,dd3x,dd4x,dd1y,dd2y,dd3y,dd4y,dd1z,dd2z,dd3z,dd4z; ^ src/sff.c: At top level: src/sff.c:661:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ephi( nphi, a1, a2, a3, a4, atype, Pk, Pn, Phase, x, f ) ^ src/sff.c: In function 'ephi': src/sff.c:672:15: warning: unused variable 'in4' [-Wunused-variable] int rat, in1,in4; ^ src/sff.c:672:11: warning: unused variable 'in1' [-Wunused-variable] int rat, in1,in4; ^ src/sff.c:672:6: warning: unused variable 'rat' [-Wunused-variable] int rat, in1,in4; ^ src/sff.c:669:44: warning: unused variable 'e3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:669:41: warning: unused variable 'e2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:669:38: warning: unused variable 'e1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:669:35: warning: unused variable 'd3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:669:32: warning: unused variable 'd2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:669:29: warning: unused variable 'd1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c: At top level: src/sff.c:815:5: warning: function declaration isn't a prototype [-Wstrict-prototypes] int nblist( x, npairs, pairlist, prm, cut, maxnb, frozen ) ^ src/sff.c: In function 'nblist': src/sff.c:828:9: warning: unused variable 'npairlist' [-Wunused-variable] int *npairlist; ^ src/sff.c:825:43: warning: unused variable 'jrescut' [-Wunused-variable] int k,jrp,jrp2,kpr, nbdist=0, irescut, jrescut; ^ src/sff.c:825:34: warning: unused variable 'irescut' [-Wunused-variable] int k,jrp,jrp2,kpr, nbdist=0, irescut, jrescut; ^ src/sff.c: At top level: src/sff.c:940:5: warning: function declaration isn't a prototype [-Wstrict-prototypes] int nblistBH( x, npairs, pairlist, prm, cut, maxnb, frozen ) ^ src/sff.c: In function 'nblistBH': src/sff.c:951:9: warning: unused variable 'npairlist' [-Wunused-variable] int *npairlist; ^ src/sff.c:947:18: warning: unused variable 'rrw' [-Wunused-variable] _REAL dx,dy,dz,rrw; ^ src/sff.c:947:15: warning: unused variable 'dz' [-Wunused-variable] _REAL dx,dy,dz,rrw; ^ src/sff.c:947:12: warning: unused variable 'dy' [-Wunused-variable] _REAL dx,dy,dz,rrw; ^ src/sff.c:947:9: warning: unused variable 'dx' [-Wunused-variable] _REAL dx,dy,dz,rrw; ^ src/sff.c: At top level: src/sff.c:1085:5: warning: function declaration isn't a prototype [-Wstrict-prototypes] int nbond( npairs, pairlist, x, f, enb, eel, ehb, enbfac, eelfac, prm, dield ) ^ src/sff.c: In function 'nbond': src/sff.c:1095:49: warning: unused variable 'eelt' [-Wunused-variable] _REAL dumx,dumy,dumz,cgi,xw1,xw2,xw3,r2inv,df2,eelt,r6,r10,f1,f2; ^ src/sff.c: In function 'getTor': src/sff.c:1298:19: warning: unused variable 'dum' [-Wunused-variable] _REAL eth, eta, dum; ^ src/sff.c: In function 'mme': src/sff.c:1340:79: warning: variable 'dum' set but not used [-Wunused-but-set-variable] _REAL ebh, eba, eth, eta, eph, epa, enb, ehb, eel, enb14, eel14, ecn, frms, dum; ^ src/sff.c: At top level: src/sff.c:1521:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ebond4( nbond, a1, a2, atype, Rk, Req, x, f ) ^ src/sff.c:1555:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL eangl4( nang, a1, a2, a3, atype, Tk, Teq, x, f ) ^ src/sff.c:1634:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ephi4( nphi, a1, a2, a3, a4, atype, Pk, Pn, Phase, x, f ) ^ src/sff.c: In function 'ephi4': src/sff.c:1643:44: warning: unused variable 'e3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:1643:41: warning: unused variable 'e2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:1643:38: warning: unused variable 'e1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:1643:35: warning: unused variable 'd3' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:1643:32: warning: unused variable 'd2' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c:1643:29: warning: unused variable 'd1' [-Wunused-variable] _REAL df,aa,bb,cc,ab,bc,ac,d1,d2,d3,e1,e2,e3,ktot; ^ src/sff.c: At top level: src/sff.c:1794:5: warning: function declaration isn't a prototype [-Wstrict-prototypes] int nblist4( x, npairs, pairlist, prm, cut, maxnb, frozen ) ^ src/sff.c:1888:5: warning: function declaration isn't a prototype [-Wstrict-prototypes] int nbond4( npairs, pairlist, x, f, enb, eel, enbfac, eelfac, prm ) ^ src/sff.c: In function 'nbond4': src/sff.c:1898:58: warning: unused variable 'eelt' [-Wunused-variable] _REAL dumx,dumy,dumz,dumw,cgi,xw1,xw2,xw3,xw4,r2inv,df2,eelt,r6,f1,f2; ^ src/sff.c: At top level: src/sff.c:1971:7: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL mme4( x, f, iter, prm, opts ) ^ src/sff.c: In function 'mme4': src/sff.c:1979:7: warning: variable 'nb_pairs' set but not used [-Wunused-but-set-variable] int nb_pairs; ^ src/sff.c: At top level: src/sff.c:2063:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] int get_masses( minv, prm , dim) ^ src/sff.c: In function 'md': src/sff.c:2088:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] _REAL ( *mme )(); ^ src/sff.c:2097:19: warning: unused variable 'k' [-Wunused-variable] int nstep, i, k; ^ src/sff.c:2096:50: warning: variable 'etot' set but not used [-Wunused-but-set-variable] _REAL dtx, dt5, rndf, dttp, ekin0, ekin, epot, etot, tscal, temp, sd; ^ src/sff.c:2096:14: warning: variable 'dt5' set but not used [-Wunused-but-set-variable] _REAL dtx, dt5, rndf, dttp, ekin0, ekin, epot, etot, tscal, temp, sd; ^ src/sff.c: At top level: src/sff.c:2192:6: warning: function declaration isn't a prototype [-Wstrict-prototypes] int mme_timer() ^ src/sff.c: In function 'nbond': src/sff.c:1258:16: warning: 'df2' may be used uninitialized in this function [-Wmaybe-uninitialized] df = (df2+6.*(f2-f1-f1)*enbfaci)*r2inv; ^ powerpc64le-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -Isrc -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c sff/prmlib_wrap.c -o build/temp.linux-ppc64le-2.7/sff/prmlib_wrap.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/oldnumeric.h:1, from sff/prmlib_wrap.c:2964: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from sff/prmlib_wrap.c:2965:0: src/prm.h:84:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_initCallbacks(); ^ src/prm.h:87:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] void mme_cleanup(); ^ sff/prmlib_wrap.c: In function 'set_callback': sff/prmlib_wrap.c:3356:9: warning: unused variable 'name' [-Wunused-variable] char *name; ^ sff/prmlib_wrap.c:3355:7: warning: unused variable 'n' [-Wunused-variable] int n, freq=1, which; ^ powerpc64le-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -D_FORTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security build/temp.linux-ppc64le-2.7/src/bhtree.o build/temp.linux-ppc64le-2.7/src/binpos.o build/temp.linux-ppc64le-2.7/src/memutil.o build/temp.linux-ppc64le-2.7/src/rand2.o build/temp.linux-ppc64le-2.7/src/conjgrad.o build/temp.linux-ppc64le-2.7/src/prm.o build/temp.linux-ppc64le-2.7/src/sff.o build/temp.linux-ppc64le-2.7/sff/prmlib_wrap.o -lm -o build/lib.linux-ppc64le-2.7/sff/_prmlib.so dh_auto_test -a /usr/bin/fakeroot debian/rules binary-arch dh binary-arch --with python2 dh_testroot -a dh_prep -a dh_auto_install -a running install running build running build_py running build_ext running install_lib creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7 creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff copying build/lib.linux-ppc64le-2.7/sff/__init__.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff creating /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-ppc64le-2.7/sff/Tests/__init__.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-ppc64le-2.7/sff/Tests/tripepparmdict.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-ppc64le-2.7/sff/Tests/p1H_crd.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-ppc64le-2.7/sff/Tests/test_dependencies.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-ppc64le-2.7/sff/Tests/test.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying build/lib.linux-ppc64le-2.7/sff/amber.py -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff copying build/lib.linux-ppc64le-2.7/sff/_prmlib.so -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff running install_data copying sff/Tests/tripeptide.prm -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests copying sff/Tests/p1H.pdb -> /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff/Tests running install_egg_info Writing /build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff/usr/lib/python2.7/dist-packages/sff-1.5.6.egg-info debian/rules override_dh_install make[1]: Entering directory `/build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519' dh_install dh_numpy make[1]: Leaving directory `/build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519' dh_installdocs -a dh_installchangelogs -a dh_python2 -a dh_perl -a dh_link -a dh_compress -a dh_fixperms -a dh_strip -a dh_strip debug symbol extraction: not enabling -a because /CurrentlyBuilding exists dh_strip debug symbol extraction: all non-arch-all packages for this build platform ppc64el: mgltools-sff dh_strip debug symbol extraction: packages to act on: mgltools-sff dh_strip debug symbol extraction: ignored packages: dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package mgltools-sff: unused substitution variable ${python:Depends} /usr/bin/pkg_create_dbgsym: building ddeb package dpkg-deb: warning: '/build/buildd/mgltools-sff-1.5.7~rc1~cvs.20130519/debian/mgltools-sff-dbgsym/DEBIAN/control' contains user-defined field 'Python-Version' dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package `mgltools-sff-dbgsym' in `../mgltools-sff-dbgsym_1.5.7~rc1~cvs.20130519-2_ppc64el.ddeb'. dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 119 pkgstriptranslations: processing mgltools-sff (in debian/mgltools-sff); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/mgltools-sff/DEBIAN/control, package mgltools-sff, directory debian/mgltools-sff pkgstripfiles: Truncating usr/share/doc/mgltools-sff/changelog.Debian.gz to topmost ten records pkgstripfiles: PNG optimization for package mgltools-sff took 0 s dpkg-deb: warning: 'debian/mgltools-sff/DEBIAN/control' contains user-defined field 'Original-Maintainer' dpkg-deb: warning: 'debian/mgltools-sff/DEBIAN/control' contains user-defined field 'Python-Version' dpkg-deb: warning: ignoring 2 warnings about the control file(s) dpkg-deb: building package `mgltools-sff' in `../mgltools-sff_1.5.7~rc1~cvs.20130519-2_ppc64el.deb'. dpkg-genchanges -B -mUbuntu Build Daemon >../mgltools-sff_1.5.7~rc1~cvs.20130519-2_ppc64el.changes dpkg-genchanges: arch-specific upload - not including arch-independent packages dpkg-genchanges: binary-only upload - not including any source code dpkg-source --after-build mgltools-sff-1.5.7~rc1~cvs.20130519 dpkg-buildpackage: binary only upload (no source included) ****************************************************************************** Build finished at 20140313-1444 Publishing debug debs. chroot-autobuild/build/buildd/mgltools-sff_1.5.7~rc1~cvs.20130519-2_ppc64el.deb: new debian package, version 2.0. size 70020 bytes: control archive=1560 bytes. 1205 bytes, 24 lines control 1179 bytes, 14 lines md5sums 162 bytes, 9 lines * postinst #!/bin/sh 261 bytes, 14 lines * prerm #!/bin/sh Package: mgltools-sff Version: 1.5.7~rc1~cvs.20130519-2 Architecture: ppc64el Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 355 Depends: libc6 (>= 2.17), python-numpy (>= 1:1.8.0), python-numpy-abi9, python (>= 2.7), python (<< 2.8), python:any (>= 2.7.1-0ubuntu2), mgltools-bhtree Enhances: autodocktools Section: non-free/science Priority: optional Homepage: http://mgltools.scripps.edu/ Description: Simple Force Field for Python This package is part of the mgltools set of Python libraries which provide an infrastructure for the analysis of protein structures and their docking of chemical compounds. . It implements an Amber force field with an interface to a molecular dynamics engine. SFF stands for simple force field. It is a C implementation of the amber force field made by Tom Macke and David Case. . This package exposes a wrapped version of the prm structure which holds the Amber parameters needed for an Amber calculation. It also exposes the mme and md functions to perform molecular mechanics and dynamics respectively. Python-Version: 2.7 chroot-autobuild/build/buildd/mgltools-sff_1.5.7~rc1~cvs.20130519-2_ppc64el.deb: drwxr-xr-x root/root 0 2014-03-13 14:44 ./ drwxr-xr-x root/root 0 2014-03-13 14:44 ./usr/ drwxr-xr-x root/root 0 2014-03-13 14:44 ./usr/lib/ drwxr-xr-x root/root 0 2014-03-13 14:44 ./usr/lib/python2.7/ drwxr-xr-x root/root 0 2014-03-13 14:44 ./usr/lib/python2.7/dist-packages/ drwxr-xr-x root/root 0 2014-03-13 14:44 ./usr/lib/python2.7/dist-packages/sff/ -rw-r--r-- root/root 144 2006-03-09 17:03 ./usr/lib/python2.7/dist-packages/sff/__init__.py drwxr-xr-x root/root 0 2014-03-13 14:44 ./usr/lib/python2.7/dist-packages/sff/Tests/ -rw-r--r-- root/root 1 2004-06-15 13:10 ./usr/lib/python2.7/dist-packages/sff/Tests/__init__.py -rw-r--r-- root/root 15331 2004-06-15 13:10 ./usr/lib/python2.7/dist-packages/sff/Tests/tripepparmdict.py -rw-r--r-- root/root 16014 2004-06-15 13:10 ./usr/lib/python2.7/dist-packages/sff/Tests/tripeptide.prm -rw-r--r-- root/root 1055 2004-06-15 13:10 ./usr/lib/python2.7/dist-packages/sff/Tests/p1H_crd.py -rw-r--r-- root/root 3534 2004-06-15 13:10 ./usr/lib/python2.7/dist-packages/sff/Tests/p1H.pdb -rw-r--r-- root/root 838 2006-03-15 16:45 ./usr/lib/python2.7/dist-packages/sff/Tests/test_dependencies.py -rw-r--r-- root/root 4955 2007-07-30 16:21 ./usr/lib/python2.7/dist-packages/sff/Tests/test.py -rw-r--r-- root/root 15007 2007-07-30 16:21 ./usr/lib/python2.7/dist-packages/sff/amber.py -rw-r--r-- root/root 251704 2014-03-13 14:44 ./usr/lib/python2.7/dist-packages/sff/_prmlib.so -rw-r--r-- root/root 336 2014-03-13 14:44 ./usr/lib/python2.7/dist-packages/sff-1.5.6.egg-info drwxr-xr-x root/root 0 2014-03-13 14:44 ./usr/share/ drwxr-xr-x root/root 0 2014-03-13 14:44 ./usr/share/doc/ drwxr-xr-x root/root 0 2014-03-13 14:44 ./usr/share/doc/mgltools-sff/ -rw-r--r-- root/root 5989 2013-05-31 13:09 ./usr/share/doc/mgltools-sff/copyright -rw-r--r-- root/root 874 2014-03-13 14:44 ./usr/share/doc/mgltools-sff/changelog.Debian.gz -rw-r--r-- root/root 1417 2011-04-26 08:14 ./usr/share/doc/mgltools-sff/README.Debian mgltools-sff_1.5.7~rc1~cvs.20130519-2_ppc64el.changes: Format: 1.8 Date: Sat, 03 Aug 2013 16:00:00 +0200 Source: mgltools-sff Binary: mgltools-sff Architecture: ppc64el Version: 1.5.7~rc1~cvs.20130519-2 Distribution: trusty Urgency: low Maintainer: Ubuntu Build Daemon Changed-By: Thorsten Alteholz Description: mgltools-sff - Simple Force Field for Python Changes: mgltools-sff (1.5.7~rc1~cvs.20130519-2) unstable; urgency=low . * new upload with different debian version (due to missing bhtree) Checksums-Sha1: baba2bb44f449e9f8fa2a73fbe7baf8008a168e0 70020 mgltools-sff_1.5.7~rc1~cvs.20130519-2_ppc64el.deb Checksums-Sha256: 1fe03747dae350336720c281174c47b9e6a581da30d990bce8b8b9541bfcf7db 70020 mgltools-sff_1.5.7~rc1~cvs.20130519-2_ppc64el.deb Files: deb66d9eb62775fd01d7604879dfce42 70020 non-free/science optional mgltools-sff_1.5.7~rc1~cvs.20130519-2_ppc64el.deb ****************************************************************************** Built successfully ****************************************************************************** Finished at 20140313-1444 Build needed 00:00:11, 3684k disk space RUN: /usr/share/launchpad-buildd/slavebin/scan-for-processes ['scan-for-processes', 'PACKAGEBUILD-5709121'] Scanning for processes to kill in build /home/buildd/build-PACKAGEBUILD-5709121/chroot-autobuild... RUN: /usr/share/launchpad-buildd/slavebin/umount-chroot ['umount-chroot', 'PACKAGEBUILD-5709121'] Unmounting chroot for build PACKAGEBUILD-5709121... RUN: /usr/share/launchpad-buildd/slavebin/remove-build ['remove-build', 'PACKAGEBUILD-5709121'] Removing build PACKAGEBUILD-5709121