After upgrading ubuntu version

Asked by Temitope on 2017-09-04

Hi there,

Please I just upgraded the version of my ubuntu from 15.10 to 16.04. I seem not to get the esys-particle running after upgrading. I tired re-installing it again. Here is the message that I got after testing it with the bingle_out.py tutorial.

adminuser@temitope-oladele:~/ESyS Tutorial$ export PATH=/usr/local/bin/:$PATH
adminuser@temitope-oladele:~/ESyS Tutorial$ export LD_LIBRARY_PATH=/usr/local/lib/:$LD_LIBRARY_PATH
adminuser@temitope-oladele:~/ESyS Tutorial$ export LIBRARY_PATH=/usr/local/lib/:$LIBRARY_PATH
adminuser@temitope-oladele:~/ESyS Tutorial$ export PYTHONPATH=/usr/local/lib/python2.7/dist-packages/:$PYTHONPATH
adminuser@temitope-oladele:~/ESyS Tutorial$ mpirun -np 2 esysparticle bingle_output.py
esysparticle: error while loading shared libraries: libmpi.so.1: cannot open shared object file: No such file or directory
esysparticle: error while loading shared libraries: libmpi.so.1: cannot open shared object file: No such file or directory
-------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code.. Per user-direction, the job has been aborted.
-------------------------------------------------------
--------------------------------------------------------------------------
mpirun detected that one or more processes exited with non-zero status, thus causing
the job to be terminated. The first process to do so was:

  Process name: [[22552,1],0]
  Exit code: 127
--------------------------------------------------------------------------
adminuser@temitope-oladele:~/ESyS Tutorial$

Kind Regards
Tope

Question information

Language:
English Edit question
Status:
Solved
For:
ESyS-Particle Edit question
Assignee:
No assignee Edit question
Solved by:
Dion Weatherley
Solved:
2017-09-21
Last query:
2017-09-21
Last reply:
2017-09-09
Best Dion Weatherley (d-weatherley) said : #1

Hi Tope,

It looks as though you do not have OpenMPI installed on your system. Execute the following command then try running bingle_output.py again:
sudo apt-get install mpi-default-bin mpi-default-dev

I suspect you will need to re-install ESyS-Particle again. A full set of instructions for Ubuntu-16.04 is available here:
https://answers.launchpad.net/esys-particle/+faq/1613

Cheers,

Dion

Temitope (temitope) said : #2

Thanks Dion Weatherley, that solved my question.