CMake Error at /usr/share/cmake/Modules/FindBoost.cmake:1128
Using the development version of dorsal; on Fedora 14. I defined the BOOST_LIBRARYDIR environment variable, because the build failed when it was unable to find boost_mpi:
export BOOST_LIBRARYDI
That fixes the cmake error for boost_mpi, but I still get an error for boost_math_tr1. I have boost-math package installed. Not sure where boost_math_tr1 is though. Here's the error message:
CMake Error at /usr/share/
Unable to find the requested Boost libraries.
Boost version: 1.44.0
Boost include path: /usr/include
The following Boost libraries could not be found:
Some (but not all) of the required Boost libraries were found. You may
need to install these additional Boost libraries. Alternatively, set
BOOST_LIBRARYDIR to the directory containing Boost libraries or BOOST_ROOT
to the location of Boost.
[... lots of lines ...]
-- The following optional packages were found:
-- -------
-- (OK) OPENMP
-- (OK) MPI
-- (OK) PETSC
-- (OK) SLEPC
-- (OK) TRILINOS
-- (OK) MTL4
-- (OK) UMFPACK
-- (OK) CHOLMOD
-- (OK) SCOTCH
-- (OK) PARMETIS
-- (OK) CGAL
-- (OK) ZLIB
-- (OK) PYTHON
-- (OK) SPHINX
--
-- The following optional packages were not enabled:
-- -------
-- (--) GMP
--
-- Enabling generation of documentation.
-- Initializing sphinx projects
-- Enabling generation of html-documentation
-- Configuring incomplete, errors occurred!
Failure with exit status: 1
Exit message: There was a problem configuring dolfin-1.0-rc1.
Question information
- Language:
- English Edit question
- Status:
- Solved
- For:
- Dorsal Edit question
- Assignee:
- No assignee Edit question
- Solved by:
- Johannes Ring
- Solved:
- 2011-12-22
- Last query:
- 2011-12-22
- Last reply:
- 2011-12-22
This question was reopened
- 2011-12-19 by jstults
jstults (joshua-stults) said : | #1 |
I also have the gmp and gmp-devel packages installed. What should I change to get dorsal to find those?
Johannes Ring (johannr) said : | #2 |
I'm not sure DOLFIN uses GMP anymore, but, if you really need it, add -DDOLFIN_
Regarding libboost_math_tr1: Have you tried to install the boost-math package?
BTW, I don't know much about Fedora, but should boost-openmpi-devel be listed among the packages that Dorsal assumes to be installed?
jstults (joshua-stults) said : | #3 |
On Nov 25, 2011 2:41 AM, "Johannes Ring" <
<email address hidden>> wrote:
>
> Your question #179760 on Dorsal changed:
> https:/
>
> Status: Open => Answered
>
> Johannes Ring proposed the following answer:
> I'm not sure DOLFIN uses GMP anymore, but, if you really need it, add
> -DDOLFIN_
> FEniCS/
> location, you may also need to define GMP_DIR in your .platform file.
>
The only reason I mention it is because Dorsal noted it in the output. I'm
happy to ignore it if Doin no longer uses GMP.
> Regarding libboost_math_tr1: Have you tried to install the boost-math
> package?
>
I have that one installed. Maybe there's a *-devel package I'm missing.
> BTW, I don't know much about Fedora, but should boost-openmpi-devel be
> listed among the packages that Dorsal assumes to be installed?
>
Yes, I think you should add this one (I installed it after the first time I
got the boost_mpi error).
Thanks for your help. I will let you know if I find what Fedora package
hides the libboost_math_tr1. I have a math_tr1.hpp, but no library that I
can locate so far.
jstults (joshua-stults) said : | #4 |
This failed build has the same error that I'm seeing: https:/
https:/
"""
The following Boost libraries could not be found:
Some (but not all) of the required Boost libraries were found.
"""
On Fedora the boost-devel package provides boos/math/tr1.hpp; but I haven't found any package that includes a libboost_
Johannes Ring (johannr) said : | #5 |
I have looked into this and it seems that the Boost.Math libraries are not in any of the Boost packages in Fedora. The packaging file (http://
180 %package math
181 Summary: Stub that used to contain boost math library
182 Group: System Environment/
183
184 %description math
185
186 This package is a stub that used to contain run-time component of boost
187 math library. Now that boost math library is header-only, this
188 package is empty. It's kept around only so that during yum-assisted
189 update, old libraries from boost-math package aren't left around.
This was changed early in 2010:
1152 * Thu Jan 14 2010 Petr Machata <email address hidden> - 1.41.0-2
1153 - Replace a boost-math subpackage with a stub
I guess Boost should therefore be built by Dorsal on Fedora. Harish?
Harish Narayanan (hnarayanan) said : | #6 |
The fedora platforms now build boost.
jstults (joshua-stults) said : | #7 |
By "now", do you mean Fedora 16? As I mentioned above, on Fedora 14 all you get is the header. Fedora 14 just reached end-of-life last Friday (9 Dec 2011). Has anyone successfully built on Fedora 15 or 16?
jstults (joshua-stults) said : | #8 |
Upgraded to Fedora 16. This seems to have worked:
./dorsal.sh FEniCS/
jstults (joshua-stults) said : | #9 |
I spoke too soon. I get this error: OSError: The Boost math library was not found, trying to run 'python demo_navier-
"yum info boost-math" gives:
Description :
: This package is a stub that used to contain run-time component of
: boost math library. Now that boost math library is header-only,
: this package is empty. It's kept around only so that during
: yum-assisted update, old libraries from boost-math package aren't
: left around.
So I'm left wondering (with my shiny new Fedora 16 install, very nice btw) for which values of "now" does Fedora build the libraries?
Johannes Ring (johannr) said : | #10 |
By "now" we mean that the latest Dorsal now builds boost on Fedora platforms (since the boost-math package in Fedora is broken).
jstults (joshua-stults) said : | #11 |
Thank you Johannes; I understand what you mean now. I updated dorsal to the latest development version (bzr branch lp:dorsal), and executing the script does indeed grab and build the Boost libraries. I sourced the dolfin.conf file as stated at the end of the script output, and then tried python -i demo_navier-
I get:
OSError: The Boost math library was not found.
If Boost math library is installed in a nonstandard location,
set the environment variable BOOST_DIR.
It looks like the boost libraries were installed in ~/Work/FEniCS/lib/. So I set BOOST_DIR=
What should I set the BOOST_DIR variable to? Should this be something that is set by dolfin.conf?
jstults (joshua-stults) said : | #12 |
Sorry, the error I get now that I've set BOOST_DIR is different:
OSError: The Boost headers was not found.
If Boost is installed in a nonstandard location,
set the environment variable BOOST_DIR.
|
#13 |
Try:
export BOOST_DIR=
jstults (joshua-stults) said : | #14 |
Thanks Johannes Ring, that solved my question.