problem compiling Trilinos and SyFi

You need to include more of the Trilinos configuration output. It is impossible to see why it fails with the output listed above.

You should also use the latest development version of Dorsal to get the latest version of Trilinos:

  bzr branch lp:dorsal

This might fix your problems with Trilinos and it should also fix the problems with SyFi.

Hi Johannes,
thank you for your answer. I tried using the development branch and Trilinos and SyFi now build. But now I have a problem in building Dolfin (it worked before):

Fetching dolfin-1.0-beta
Unpacking dolfin-1.0-beta
Building dolfin-1.0-beta
-- Checking for package 'Armadillo'
-- Checking for package 'SCOTCH-PT'
-- Performing test SCOTCH_TEST_RUNS
-- Performing test SCOTCH_TEST_RUNS - Success
-- Checking for package 'AMD'
-- Checking for package 'BLAS'
-- Checking for package 'UMFPACK'
-- Checking for package 'AMD'
-- Checking for package 'BLAS'
-- Checking for package 'CHOLMOD'
-- Checking for package 'AMD'
-- Checking for package 'BLAS'
-- Checking for package 'LAPACK'
-- Checking for package 'CHOLMOD'
-- Checking for package 'AMD'
-- Checking for package 'BLAS'
-- Checking for package 'LAPACK'
-- Checking for package 'Trilinos'
CMake Warning at /home/bento/Work/FEniCS/include/trilinos/TrilinosConfig.cmake:59 (MESSAGE):
  TrilinosConfig.cmake has moved. It now exists at a location under the
  installation prefix where the find_package command looks by default
  (<prefix>/lib/cmake/Trilinos). This compatibility file exists at the old
  location (<prefix>/include) to present this message and load the file from
  its new location.

  The find_package() call that loaded this file did so because its cached
  result variable, Trilinos_DIR, is set to

    /home/bento/Work/FEniCS/include/trilinos

  I'm locally setting Trilinos_DIR to

    /home/bento/Work/FEniCS/include/lib/cmake/Trilinos

  and loading TrilinosConfig.cmake from its new location. One may suppress
  this warning by setting the above value in the cache. However, the
  application needs modification permanently fix the issue. The
  find_package() call that loaded this file may have the form

    find_package(Trilinos REQUIRED PATHS ${TRILINOS_PATH}/include)

  Change it to the form

    set(CMAKE_PREFIX_PATH ${TRILINOS_PATH} ${CMAKE_PREFIX_PATH})
    find_package(Trilinos REQUIRED)

  to find TrilinosConfig.cmake in its new location in future builds while
  still honoring the TRILINOS_PATH option for this application.
Call Stack (most recent call first):
  cmake/modules/FindTrilinos.cmake:12 (find_package)
  CMakeLists.txt:251 (find_package)

CMake Error at /home/bento/Work/FEniCS/include/trilinos/TrilinosConfig.cmake:81 (INCLUDE):
  include could not find load file:

    /home/bento/Work/FEniCS/include/lib/cmake/Trilinos/TrilinosConfig.cmake
Call Stack (most recent call first):
  cmake/modules/FindTrilinos.cmake:12 (find_package)
  CMakeLists.txt:251 (find_package)

-- Checking for package 'MTL4'
-- Checking for package 'BLAS'
-- Performing Test MTL4_TEST_RUNS
-- Performing Test MTL4_TEST_RUNS - Success
-- Found MTL4: /home/bento/Work/FEniCS/include
-- Checking for package 'PETSc'
-- PETSC_DIR is /home/bento/Work/FEniCS
-- PETSC_ARCH is empty
-- Found petscconf.h
-- PETSc test runs
-- Found PETSc: /home/bento/Work/FEniCS/lib/libpetsc.so
-- Checking for package 'SLEPc'
-- SLEPC_DIR is /home/bento/Work/FEniCS
-- SLEPc test runs
-- Checking for package 'CGAL'
-- Could NOT find HDF5 (missing: HDF5_LIBRARIES HDF5_INCLUDE_DIRS)
CMake Warning at CMakeLists.txt:287 (message):
  HDF5 found, but is not configured to run in parallel.

-- Checking for package 'CPPUNIT'
-- Checking for package 'Sphinx'
--
-- The following optional packages were found:
-- -------------------------------------------
-- (OK) OPENMP
-- (OK) MPI
-- (OK) PETSC
-- (OK) SLEPC
-- (OK) TRILINOS
-- (OK) MTL4
-- (OK) UMFPACK
-- (OK) CHOLMOD
-- (OK) SCOTCH
-- (OK) PARMETIS
-- (OK) CGAL
-- (OK) ZLIB
-- (OK) PYTHON
-- (OK) SPHINX
--
-- The following optional packages were not enabled:
-- -------------------------------------------------
-- (--) GMP
--
-- The following optional packages could not be found:
-- ---------------------------------------------------
-- (**) HDF5
--
-- Enabling generation of documentation.
-- Initializing sphinx projects
-- Enabling generation of html-documentation
-- Configuring incomplete, errors occurred!
Failure with exit status: 1
Exit message: There was a problem configuring dolfin-1.0-beta.

Thanks Johannes Ring, that solved my question.